View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20084_low_20 (Length: 241)
Name: NF20084_low_20
Description: NF20084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20084_low_20 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 40232677 - 40232917
Alignment:
| Q |
1 |
aatccattttactgaaacatggattgggactactaccttcctaatctggcttgcaaaaatgcgggacacaagtcttacttagaggttagtaccaacctgg |
100 |
Q |
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| T |
40232677 |
aatccattttaccgaaacatggattgggactactaccttcctaatctggcttgcaaaaatgcgggacacaagttttacttagaggttagtaccaacctgg |
40232776 |
T |
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| Q |
101 |
tacacaatttttgtggtgattagagcgattcctgattttgctttaacgaattacatactatatatatagtacctacctagctcaattatgtgatgtttac |
200 |
Q |
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| T |
40232777 |
tacacaatttttgtggtgattagagcgattcctgattttgctttaacgaattacatactatatatatagtacctacctagctcaattatgtgatgtttac |
40232876 |
T |
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| Q |
201 |
ttactaattattcttatacttattatattatatacatccaa |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
40232877 |
ttactaattattcttatacttattatattatatacatccaa |
40232917 |
T |
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