View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20090_low_56 (Length: 240)
Name: NF20090_low_56
Description: NF20090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20090_low_56 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 19475233 - 19475012
Alignment:
| Q |
1 |
tccatctgcagatacaactagcatttcatttggatcatattcatcaatatctaacctttttgataaccattttggagaaaccaaatttttgttgtgaccc |
100 |
Q |
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| T |
19475233 |
tccatctgcagatacaactagcatttcatttggatcatattcatcaaaatctaacctttttgataaccattttggagaaaccaaatttttgttgtgaccc |
19475134 |
T |
|
| Q |
101 |
ttttgatttgaaggctcaggtgcatgattagaaagcatagaaagagagttacttacatgtttgtaagtgttgataatagaatccacaagaattggtttat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19475133 |
ttttgatttgaaggctcaggtgcatgattagaaagcatagaaagagagttacttacatgtttgtaagtgttgataatagaatccacaagaattggtttat |
19475034 |
T |
|
| Q |
201 |
atgtaccagaagcagaatcaag |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
19475033 |
atgtaccagaagcagaatcaag |
19475012 |
T |
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