View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20093_high_7 (Length: 350)
Name: NF20093_high_7
Description: NF20093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20093_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 6 - 330
Target Start/End: Original strand, 38027144 - 38027452
Alignment:
| Q |
6 |
tgaagaagctttggcttcggatccattcaaccaataaaaaacgtaagttagcattataatttcaattctagtcacattaattccattgcatttcttttat |
105 |
Q |
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| T |
38027144 |
tgaagaagctttggcttcggatccattcaaccaataaaagacgtaagttagcattataatttaaattctagtcacattaattccattgcatttcttttat |
38027243 |
T |
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| Q |
106 |
tcattttgctagtatttgcattatgatccttttctttgaccattcttgttcaattcatataatttcatgttcatatatttatatactcctactttataca |
205 |
Q |
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| T |
38027244 |
tcattttgctagtatttgcattatgatccttttctttgaccattcttgttcaattcatataatttcatgttcatatatttatatact------------- |
38027330 |
T |
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| Q |
206 |
aaacaatgatgatatagtaattattaccgattaatttttgtttcttatgtaaaataggtagaggattatacatcttatacaaggatgttaagtcatgccc |
305 |
Q |
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| T |
38027331 |
---caatgatgatatagtaattattaccgattaatttttgtttcttatgtaaaataggtagaggattatacatcttatacaaggatgttaagtcatgccc |
38027427 |
T |
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| Q |
306 |
atgtgaagatgtgcaagttctttgg |
330 |
Q |
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| T |
38027428 |
atgtgaagatgtgcaagttctttgg |
38027452 |
T |
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