View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20093_low_1 (Length: 749)

Name: NF20093_low_1
Description: NF20093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20093_low_1
NF20093_low_1
[»] chr8 (3 HSPs)
chr8 (382-534)||(12677470-12677622)
chr8 (382-534)||(33060978-33061127)
chr8 (376-460)||(25721384-25721468)
[»] chr4 (5 HSPs)
chr4 (382-525)||(32324699-32324842)
chr4 (382-459)||(9369667-9369742)
chr4 (382-457)||(10573384-10573457)
chr4 (382-465)||(6510359-6510442)
chr4 (382-476)||(38714064-38714156)
[»] chr7 (4 HSPs)
chr7 (382-530)||(33999805-33999953)
chr7 (382-508)||(13412989-13413115)
chr7 (384-492)||(15954471-15954579)
chr7 (382-530)||(39709148-39709300)
[»] chr1 (3 HSPs)
chr1 (382-524)||(750070-750212)
chr1 (382-456)||(43411516-43411590)
chr1 (382-459)||(16587803-16587878)
[»] chr2 (4 HSPs)
chr2 (405-534)||(33412656-33412785)
chr2 (382-524)||(16255764-16255906)
chr2 (115-225)||(41051000-41051110)
chr2 (17-49)||(18494158-18494190)
[»] chr3 (2 HSPs)
chr3 (385-529)||(52343835-52343979)
chr3 (377-534)||(32516526-32516685)
[»] chr5 (3 HSPs)
chr5 (382-524)||(36419142-36419284)
chr5 (427-534)||(26103045-26103152)
chr5 (377-446)||(28569654-28569723)
[»] chr6 (3 HSPs)
chr6 (384-476)||(13094725-13094817)
chr6 (382-466)||(2820682-2820764)
chr6 (382-466)||(12691749-12691831)


Alignment Details
Target: chr8 (Bit Score: 117; Significance: 3e-59; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 382 - 534
Target Start/End: Original strand, 12677470 - 12677622
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaaccaagatacatcagt 481  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||  ||||||||||||  |||    
T  12677470 tttttttaacaaactaaaatgagatatatattatgaacaatggcgatttaccgtgcacaagacatgcaaaaggtaaaccgattaaccaagatacagtagt 12677569  T
Q  482 agggtgctattttaaaagagcaccataaaaaagttacagaaaattacacaata 534  Q
    | |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12677570 aaggtgctattttagaagagcaccataaaaaagttacagaaaattacacaata 12677622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 382 - 534
Target Start/End: Complemental strand, 33061127 - 33060978
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaaccaagatacatcagt 481  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||    
T  33061127 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatgcaaaaggtaaaccgaccaaccaagatacaactgt 33061028  T
Q  482 agggtgctattttaaaagagcaccataaaaaagttacagaaaattacacaata 534  Q
    |||||||||||||| || ||||||   ||||| |||||||||| |||||||||    
T  33061027 agggtgctattttagaatagcacc---aaaaaattacagaaaactacacaata 33060978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 376 - 460
Target Start/End: Complemental strand, 25721468 - 25721384
Alignment:
Q  376 atattcttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaacc 460  Q
    ||||| ||||| ||||||||||||||||||| |||||||| ||||| |   |||||||||||||||||||| ||||||| |||||    
T  25721468 atattttttttggaacaaactaaaatgagatttatattataaacaaggttaatttaccgtgcacaagacatgcaaaaggcaaacc 25721384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 1e-58; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 382 - 525
Target Start/End: Complemental strand, 32324842 - 32324699
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaaccaagatacatcagt 481  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||    
T  32324842 tttttttaacaaactaaaatgagatatatattatgaacaataacgatttaccgtgcacaagacatgcaaaaggtaaaccgaccaactaagatacaacagt 32324743  T
Q  482 agggtgctattttaaaagagcaccataaaaaagttacagaaaat 525  Q
    |||||||||||||| || ||||||||||||||||||||||||||    
T  32324742 agggtgctattttagaatagcaccataaaaaagttacagaaaat 32324699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 382 - 459
Target Start/End: Original strand, 9369667 - 9369742
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaac 459  Q
    ||||||||||||||||||||||  |||||||||| || || |  ||||||||||||||||||||| |||||| |||||    
T  9369667 ttttttgaacaaactaaaatga--tatatattataaataaggttgatttaccgtgcacaagacatgcaaaagataaac 9369742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 382 - 457
Target Start/End: Original strand, 10573384 - 10573457
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaa 457  Q
    |||||| |||||||||||||||  ||||| |||| ||||| | |||||||||||||| ||||| | ||||||||||    
T  10573384 tttttttaacaaactaaaatga--tatattttataaacaaggtcgatttaccgtgcataagacttgcaaaaggtaa 10573457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 465
Target Start/End: Original strand, 6510359 - 6510442
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgacca 465  Q
    ||||||||||||||||||||   |||||| |||| ||  | |   |||||||||||||||||||| ||||||||||||| ||||    
T  6510359 ttttttgaacaaactaaaatagtatatattttataaaagaggttaatttaccgtgcacaagacatgcaaaaggtaaaccaacca 6510442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 476
Target Start/End: Original strand, 38714064 - 38714156
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaaccaagataca 476  Q
    |||||| ||||||||||||||||||||||  |||  |||| |   ||||||| |||||||||||| ||||| ||||||| ||| ||||| |||||    
T  38714064 ttttttaaacaaactaaaatgagatatat--tatagacaaagttaatttaccatgcacaagacatgcaaaaagtaaaccaacctaccaacataca 38714156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 2e-54; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 382 - 530
Target Start/End: Complemental strand, 33999953 - 33999805
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaaccaagatacatcagt 481  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  33999953 ttttttgaacaaactaaaatgagatgtatattatgaacaaggacgatttaccgtgcacaagacatgcaaaaggtaaaccaaccaaccaagatacaacagt 33999854  T
Q  482 agggtgctattttaaaagagcaccataaaaaagttacagaaaattacac 530  Q
    |  ||||||||||||| || |||||||||||||||| ||||||||||||    
T  33999853 aaagtgctattttaaatgaacaccataaaaaagttatagaaaattacac 33999805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 382 - 508
Target Start/End: Complemental strand, 13413115 - 13412989
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaaccaagatacatcagt 481  Q
    ||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||  |||    
T  13413115 ttttttgaacaaattaaaatgagatatatattatgaactatggcgatttaccgtgcacaagacatgcaaaaggtaaaccgaccaatcaagatacaggagt 13413016  T
Q  482 agggtgctattttaaaagagcaccata 508  Q
    |||||| ||||||| ||||||||||||    
T  13413015 agggtgatattttagaagagcaccata 13412989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 384 - 492
Target Start/End: Complemental strand, 15954579 - 15954471
Alignment:
Q  384 ttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaaccaagatacatcagtag 483  Q
    |||||||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  15954579 ttttgaacaaactaaaatgagacatatattataaacaatggcgatttaccgtggacaagacatgcaaaaggtaaaccgaccaaccaaaatacaacagtag 15954480  T
Q  484 ggtgctatt 492  Q
    |||||||||    
T  15954479 ggtgctatt 15954471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 382 - 530
Target Start/End: Original strand, 39709148 - 39709300
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattat---gaacaatgacgatttaccgtgcacaagacatacaaaagg-taaaccgaccaaccaagatacat 477  Q
    |||||| |||||||||||||||||| ||||||||   |||||| || ||||||||||||| |||| || ||||||| |||||| |||||||| ||||||     
T  39709148 ttttttaaacaaactaaaatgagatgtatattattatgaacaaagaagatttaccgtgcaaaagatatgcaaaagggtaaaccaaccaaccaggatacaa 39709247  T
Q  478 cagtagggtgctattttaaaagagcaccataaaaaagttacagaaaattacac 530  Q
    ||||  |||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  39709248 cagtcaggtgctattttaaatgagcaccgtaaaaaagttatagaaaattacac 39709300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 7e-51; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 382 - 524
Target Start/End: Original strand, 750070 - 750212
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaaccaagatacatcagt 481  Q
    |||||| ||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||| ||||||||||||||| || |    
T  750070 tttttttaacaaactaaaatgatatatatattatgaacaatggcgatttaccatgcacaagacatgcaaaaggtaaaccaaccaaccaagatacaacaat 750169  T
Q  482 agggtgctattttaaaagagcaccataaaaaagttacagaaaa 524  Q
    | |||||||||||||||||||||||||||||||||| ||||||    
T  750170 aaggtgctattttaaaagagcaccataaaaaagttatagaaaa 750212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 382 - 456
Target Start/End: Original strand, 43411516 - 43411590
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggta 456  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||    
T  43411516 tttttttaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtacacaagatatgcaaaaggta 43411590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 382 - 459
Target Start/End: Complemental strand, 16587878 - 16587803
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaac 459  Q
    ||||||||||||| |||||||||||||||  ||| |||||    |||||||| |||||||||||| ||||||| ||||    
T  16587878 ttttttgaacaaaataaaatgagatatat--tataaacaaaattgatttaccctgcacaagacatgcaaaaggaaaac 16587803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 3e-50; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 405 - 534
Target Start/End: Complemental strand, 33412785 - 33412656
Alignment:
Q  405 atatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaaccaagatacatcagtagggtgctattttaaaagagcac 504  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||  || |||||    
T  33412785 atatatattatgaacaatggcgatttaccgtgcacaagacatgcaaaaggtaaaccgaccaaccaagatacaacagtagggtgctatttttgaatagcac 33412686  T
Q  505 cataaaaaagttacagaaaattacacaata 534  Q
    ||||||||||||||| ||||||||||||||    
T  33412685 cataaaaaagttacataaaattacacaata 33412656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 382 - 524
Target Start/End: Complemental strand, 16255906 - 16255764
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaaccaagatacatcagt 481  Q
    |||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||| || |    
T  16255906 ttttttgaacaaactaaaatgagacatatattataaacaatggcgatttaccgtgcacaagacatgcaaaaggtaaaccgaccaaccaatatacaacaat 16255807  T
Q  482 agggtgctattttaaaagagcaccataaaaaagttacagaaaa 524  Q
    |||||||||||||| |  | |||||||||||||||||| ||||    
T  16255806 agggtgctattttagagtaacaccataaaaaagttacaaaaaa 16255764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 41051110 - 41051000
Alignment:
Q  115 cattttcatgagtgcaacgtagaaagtctccaatcaaaaaccatgcaccaacctttccgagttagttttgactctgcttccaccgtttctctctcttacc 214  Q
    ||||||||||| |||| |||||||  |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41051110 cattttcatgactgcaccgtagaagctctccaatgaaaaaccatgcaccaacctttctgagttagttttgactctgcttccaccgtttctctctcttacc 41051011  T
Q  215 actacttaaac 225  Q
    |||||||||||    
T  41051010 actacttaaac 41051000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 18494190 - 18494158
Alignment:
Q  17 ttgtaagcattactagatgaattgctattgatc 49  Q
    |||||||||||||||||||||||||||||||||    
T  18494190 ttgtaagcattactagatgaattgctattgatc 18494158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 1e-49; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 385 - 529
Target Start/End: Original strand, 52343835 - 52343979
Alignment:
Q  385 tttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaaccaagatacatcagtagg 484  Q
    ||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||| ||||| |||||||    
T  52343835 tttgaacaaactaaaatgagacatatattatgaacaatggtgatttaccgtgcacaagacatgcaaaaggtaaacctaccaaccaaaatacaacagtagg 52343934  T
Q  485 gtgctattttaaaagagcaccataaaaaagttacagaaaattaca 529  Q
    ||||||||||| || |||||||||||||||||||| |||| ||||    
T  52343935 gtgctattttagaatagcaccataaaaaagttacaaaaaactaca 52343979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 377 - 534
Target Start/End: Original strand, 32516526 - 32516685
Alignment:
Q  377 tattcttttttgaacaaactaaaatgagatatatat--tatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaaccaagata 474  Q
    |||| |||||| || |||||||||||||||||||||  ||| ||||| |   ||||  |||||| ||||||| ||||||||||||| |||  |||| |||    
T  32516526 tattatttttttaagaaactaaaatgagatatatatattataaacaaggttaatttgtcgtgcataagacatgcaaaaggtaaaccaacctgccaaaata 32516625  T
Q  475 catcagtagggtgctattttaaaagagcaccataaaaaagttacagaaaattacacaata 534  Q
    ||  ||||||||| | || |||| ||||||||| || |||||| || | |||||||||||    
T  32516626 caagagtagggtgttgttctaaaggagcaccatcaagaagttagagcacattacacaata 32516685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 6e-39; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 382 - 524
Target Start/End: Original strand, 36419142 - 36419284
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaaccaagatacatcagt 481  Q
    ||||||||||||| |||||||||| ||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||| ||| ||||| ||||    
T  36419142 ttttttgaacaaagtaaaatgagacatatattataaacaatggcgatttaccgtgcacaagacatgcaaaaggtaaaccgaccaatcaaaatacaacagt 36419241  T
Q  482 agggtgctattttaaaagagcaccataaaaaagttacagaaaa 524  Q
    ||||||||| |||| |  | |||| ||||||||||||| ||||    
T  36419242 agggtgctaatttagagtaacaccgtaaaaaagttacaaaaaa 36419284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 427 - 534
Target Start/End: Complemental strand, 26103152 - 26103045
Alignment:
Q  427 atttaccgtgcacaagacatacaaaaggtaaaccgaccaaccaagatacatcagtagggtgctattttaaaagagcaccataaaaaagttacagaaaatt 526  Q
    |||||||||||||||||||| |||| ||||| || ||| ||||| ||||| ||||| ||| || || |||| ||||||||| ||||||||| ||||||||    
T  26103152 atttaccgtgcacaagacatgcaaagggtaagccaacctaccaaaatacaacagtaaggttctgttctaaaggagcaccatcaaaaagttaaagaaaatt 26103053  T
Q  527 acacaata 534  Q
    ||||||||    
T  26103052 acacaata 26103045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 377 - 446
Target Start/End: Original strand, 28569654 - 28569723
Alignment:
Q  377 tattcttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacat 446  Q
    |||| |||||||||||||||||||||||||||||||||| ||||| |   ||||||||||||||||||||    
T  28569654 tatttttttttgaacaaactaaaatgagatatatattataaacaaggttaatttaccgtgcacaagacat 28569723  T

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Target: chr6 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 384 - 476
Target Start/End: Original strand, 13094725 - 13094817
Alignment:
Q  384 ttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaaccaagataca 476  Q
    |||| ||||||||||||||||||||||||||| ||||| |   ||||| | || ||||||||| ||||||||||||| ||| ||||| |||||    
T  13094725 tttttaacaaactaaaatgagatatatattataaacaaggttaatttatcatgaacaagacatgcaaaaggtaaaccaacctaccaaaataca 13094817  T

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Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 2820682 - 2820764
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaa 466  Q
    |||||||||||||| |||||||  |||||||||| ||||| |   ||||||| |||||||||||| ||||||||||||| |||||    
T  2820682 ttttttgaacaaacaaaaatga--tatatattataaacaaggtgaatttaccttgcacaagacatgcaaaaggtaaaccaaccaa 2820764  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 382 - 466
Target Start/End: Original strand, 12691749 - 12691831
Alignment:
Q  382 ttttttgaacaaactaaaatgagatatatattatgaacaatgacgatttaccgtgcacaagacatacaaaaggtaaaccgaccaa 466  Q
    |||||| ||||||||||||||||||||||  ||| |||||    ||||||||  ||||||||||| ||||||||||||| |||||    
T  12691749 tttttttaacaaactaaaatgagatatat--tataaacaaaattgatttaccccgcacaagacatgcaaaaggtaaaccaaccaa 12691831  T

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