View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20094_high_62 (Length: 272)

Name: NF20094_high_62
Description: NF20094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20094_high_62
NF20094_high_62
[»] chr3 (68 HSPs)
chr3 (151-272)||(42364212-42364333)
chr3 (150-272)||(38785367-38785489)
chr3 (145-272)||(44670543-44670670)
chr3 (154-272)||(29347545-29347663)
chr3 (151-272)||(11140247-11140367)
chr3 (151-272)||(29786882-29787003)
chr3 (151-272)||(31308877-31308998)
chr3 (151-272)||(35171478-35171599)
chr3 (151-272)||(42067579-42067700)
chr3 (151-272)||(876507-876628)
chr3 (151-272)||(40650067-40650188)
chr3 (150-272)||(42848491-42848615)
chr3 (151-272)||(44365621-44365745)
chr3 (151-272)||(47948679-47948801)
chr3 (151-261)||(27082641-27082752)
chr3 (151-272)||(45636089-45636209)
chr3 (151-272)||(39630175-39630297)
chr3 (154-272)||(46959557-46959673)
chr3 (212-272)||(379010-379070)
chr3 (152-272)||(4659757-4659877)
chr3 (151-272)||(52082307-52082435)
chr3 (151-272)||(27647478-27647599)
chr3 (153-272)||(40477759-40477879)
chr3 (149-272)||(43715033-43715156)
chr3 (151-272)||(9506903-9507025)
chr3 (151-272)||(9514878-9515000)
chr3 (151-272)||(23456454-23456576)
chr3 (151-272)||(26885256-26885378)
chr3 (151-272)||(21289098-21289219)
chr3 (146-266)||(4663429-4663549)
chr3 (148-272)||(53516866-53516990)
chr3 (151-225)||(27079711-27079785)
chr3 (176-270)||(45635968-45636062)
chr3 (151-270)||(42622136-42622256)
chr3 (176-272)||(3136295-3136391)
chr3 (150-266)||(25592297-25592413)
chr3 (153-272)||(51344376-51344496)
chr3 (149-268)||(19547487-19547606)
chr3 (146-232)||(29491658-29491745)
chr3 (150-272)||(33006298-33006421)
chr3 (151-256)||(44522023-44522128)
chr3 (176-270)||(50030038-50030132)
chr3 (152-272)||(15996821-15996942)
chr3 (151-247)||(16136932-16137029)
chr3 (227-272)||(37491992-37492037)
chr3 (215-272)||(45290796-45290853)
chr3 (203-272)||(45538929-45538998)
chr3 (151-272)||(32636626-32636749)
chr3 (149-231)||(40021077-40021160)
chr3 (153-250)||(41282841-41282939)
chr3 (154-250)||(31479559-31479656)
chr3 (157-209)||(379225-379277)
chr3 (176-272)||(32717678-32717774)
chr3 (176-232)||(34593718-34593774)
chr3 (154-272)||(1129414-1129532)
chr3 (146-272)||(7352452-7352579)
chr3 (154-233)||(7671806-7671885)
chr3 (176-231)||(8965941-8965996)
chr3 (176-250)||(25482550-25482624)
chr3 (151-256)||(28718227-28718333)
chr3 (203-272)||(40473887-40473957)
chr3 (196-250)||(54262840-54262894)
chr3 (148-256)||(5532345-5532454)
chr3 (203-272)||(25834284-25834353)
chr3 (151-250)||(43745654-43745754)
chr3 (151-250)||(8433437-8433537)
chr3 (150-256)||(50412372-50412480)
chr3 (190-270)||(52162436-52162515)
[»] chr8 (56 HSPs)
chr8 (151-272)||(15726175-15726296)
chr8 (13-150)||(35038103-35038240)
chr8 (145-272)||(34332106-34332233)
chr8 (150-272)||(37161503-37161625)
chr8 (151-272)||(14498588-14498709)
chr8 (151-272)||(29773445-29773566)
chr8 (151-272)||(38502184-38502305)
chr8 (150-272)||(28090191-28090312)
chr8 (151-272)||(23286565-23286686)
chr8 (151-272)||(36002356-36002477)
chr8 (148-272)||(44934896-44935020)
chr8 (151-272)||(37511088-37511209)
chr8 (153-272)||(12163228-12163347)
chr8 (153-272)||(12407656-12407775)
chr8 (151-272)||(945976-946096)
chr8 (151-272)||(29229463-29229583)
chr8 (166-268)||(10280575-10280677)
chr8 (151-272)||(29459633-29459755)
chr8 (151-272)||(2273010-2273131)
chr8 (151-272)||(17642074-17642195)
chr8 (151-261)||(16323559-16323669)
chr8 (151-272)||(37465684-37465805)
chr8 (151-272)||(42444503-42444624)
chr8 (153-272)||(43921127-43921246)
chr8 (150-272)||(43049536-43049657)
chr8 (148-272)||(529264-529388)
chr8 (153-250)||(1043060-1043158)
chr8 (151-272)||(6800058-6800178)
chr8 (151-258)||(19718650-19718757)
chr8 (151-272)||(29454493-29454616)
chr8 (145-272)||(39347415-39347542)
chr8 (176-270)||(17792229-17792323)
chr8 (151-272)||(23274622-23274744)
chr8 (151-272)||(4475046-4475166)
chr8 (151-256)||(43485342-43485447)
chr8 (150-272)||(26439808-26439931)
chr8 (147-256)||(34633859-34633970)
chr8 (151-250)||(4214802-4214902)
chr8 (176-272)||(36886447-36886543)
chr8 (154-272)||(40776903-40777022)
chr8 (151-272)||(6631190-6631312)
chr8 (150-256)||(29604314-29604421)
chr8 (145-272)||(41720241-41720370)
chr8 (203-272)||(45452671-45452740)
chr8 (151-266)||(13483188-13483302)
chr8 (151-233)||(39300412-39300495)
chr8 (151-256)||(2749608-2749713)
chr8 (145-250)||(15451755-15451861)
chr8 (176-270)||(27171940-27172033)
chr8 (149-233)||(2261027-2261112)
chr8 (148-232)||(5215646-5215730)
chr8 (151-256)||(17096581-17096687)
chr8 (148-256)||(28897203-28897313)
chr8 (149-209)||(34047765-34047825)
chr8 (148-220)||(39721967-39722039)
chr8 (145-272)||(40578687-40578815)
[»] chr5 (53 HSPs)
chr5 (153-272)||(6560828-6560947)
chr5 (150-272)||(43237638-43237760)
chr5 (151-272)||(34302646-34302769)
chr5 (151-272)||(6532579-6532700)
chr5 (151-272)||(1661979-1662100)
chr5 (151-272)||(2141242-2141363)
chr5 (150-272)||(2029352-2029474)
chr5 (151-272)||(9589209-9589330)
chr5 (152-272)||(3056386-3056506)
chr5 (148-272)||(21605645-21605769)
chr5 (153-272)||(24097873-24097992)
chr5 (154-272)||(32467046-32467164)
chr5 (151-272)||(6114059-6114180)
chr5 (157-272)||(18228744-18228859)
chr5 (151-272)||(42917117-42917239)
chr5 (149-272)||(9534868-9534988)
chr5 (151-272)||(2413927-2414045)
chr5 (145-272)||(4617997-4618124)
chr5 (154-272)||(13410545-13410662)
chr5 (154-272)||(13090917-13091035)
chr5 (151-272)||(41802106-41802227)
chr5 (154-272)||(14967235-14967353)
chr5 (147-272)||(36752494-36752620)
chr5 (151-272)||(29743895-29744017)
chr5 (176-261)||(35817644-35817729)
chr5 (150-261)||(21051600-21051711)
chr5 (150-272)||(28332119-28332242)
chr5 (150-272)||(12362643-12362765)
chr5 (154-272)||(27116465-27116583)
chr5 (165-272)||(37431633-37431744)
chr5 (149-272)||(13795555-13795678)
chr5 (176-270)||(13645795-13645889)
chr5 (176-270)||(32455328-32455422)
chr5 (176-270)||(38355003-38355097)
chr5 (203-272)||(13118854-13118923)
chr5 (163-256)||(14096705-14096798)
chr5 (203-272)||(42486890-42486959)
chr5 (176-268)||(2318715-2318807)
chr5 (145-232)||(25929554-25929642)
chr5 (153-266)||(3425369-3425481)
chr5 (176-233)||(35682122-35682179)
chr5 (182-256)||(3881864-3881938)
chr5 (154-256)||(23259046-23259149)
chr5 (150-233)||(29996509-29996592)
chr5 (153-207)||(33145210-33145264)
chr5 (183-261)||(36880818-36880896)
chr5 (151-232)||(16432976-16433057)
chr5 (227-268)||(22780590-22780631)
chr5 (151-257)||(39979368-39979476)
chr5 (153-256)||(33210372-33210476)
chr5 (151-250)||(33678155-33678255)
chr5 (149-244)||(36339160-36339255)
chr5 (176-216)||(39041667-39041707)
[»] chr1 (83 HSPs)
chr1 (153-272)||(51984936-51985055)
chr1 (154-272)||(51781389-51781507)
chr1 (151-272)||(52303013-52303134)
chr1 (151-272)||(16482576-16482696)
chr1 (151-272)||(28493810-28493931)
chr1 (151-271)||(50905581-50905701)
chr1 (145-272)||(8461812-8461938)
chr1 (151-268)||(27295058-27295175)
chr1 (151-272)||(31930983-31931104)
chr1 (151-272)||(45423609-45423730)
chr1 (149-272)||(37498742-37498864)
chr1 (157-272)||(23459841-23459958)
chr1 (154-272)||(26102758-26102876)
chr1 (150-272)||(39190842-39190964)
chr1 (150-272)||(39971554-39971676)
chr1 (151-272)||(922127-922248)
chr1 (151-272)||(35305151-35305272)
chr1 (151-272)||(41073270-41073390)
chr1 (147-272)||(5956812-5956937)
chr1 (151-272)||(38262419-38262540)
chr1 (151-272)||(46771017-46771138)
chr1 (157-272)||(51519788-51519901)
chr1 (147-272)||(2247063-2247188)
chr1 (153-272)||(11778921-11779040)
chr1 (176-272)||(29106649-29106748)
chr1 (148-247)||(18641885-18641984)
chr1 (153-261)||(51184044-51184153)
chr1 (145-272)||(632933-633060)
chr1 (145-272)||(23304401-23304528)
chr1 (179-272)||(50239519-50239612)
chr1 (148-272)||(7121954-7122077)
chr1 (183-250)||(44246305-44246372)
chr1 (151-272)||(35874223-35874345)
chr1 (157-272)||(45673333-45673436)
chr1 (148-272)||(48616733-48616856)
chr1 (176-270)||(17525462-17525556)
chr1 (204-266)||(43306582-43306644)
chr1 (176-268)||(6520274-6520366)
chr1 (154-243)||(23056768-23056857)
chr1 (155-272)||(52260817-52260934)
chr1 (153-272)||(26011227-26011346)
chr1 (177-272)||(35910188-35910283)
chr1 (151-266)||(42317116-42317231)
chr1 (154-272)||(27352850-27352968)
chr1 (151-272)||(51056197-51056318)
chr1 (151-272)||(9166873-9166994)
chr1 (177-250)||(32144975-32145048)
chr1 (151-272)||(47719258-47719378)
chr1 (151-256)||(477735-477841)
chr1 (151-272)||(38260802-38260924)
chr1 (151-272)||(28791653-28791774)
chr1 (150-272)||(6526712-6526836)
chr1 (176-272)||(31821867-31821963)
chr1 (176-272)||(36275002-36275098)
chr1 (185-272)||(2620680-2620767)
chr1 (151-272)||(24381316-24381439)
chr1 (151-230)||(34256453-34256532)
chr1 (149-208)||(51369327-51369386)
chr1 (148-233)||(48977200-48977286)
chr1 (203-256)||(42647450-42647503)
chr1 (201-270)||(45809494-45809563)
chr1 (150-250)||(51787775-51787876)
chr1 (203-272)||(52180287-52180356)
chr1 (150-272)||(31075894-31076018)
chr1 (176-272)||(33906344-33906440)
chr1 (153-272)||(49854107-49854226)
chr1 (203-250)||(45622791-45622838)
chr1 (148-256)||(46281939-46282048)
chr1 (151-254)||(46872369-46872474)
chr1 (151-256)||(17554118-17554224)
chr1 (153-250)||(30263889-30263987)
chr1 (150-232)||(44978868-44978950)
chr1 (222-272)||(51369388-51369438)
chr1 (151-256)||(9260116-9260223)
chr1 (211-272)||(10179158-10179219)
chr1 (192-233)||(49616150-49616191)
chr1 (190-250)||(2665218-2665277)
chr1 (149-256)||(12227119-12227229)
chr1 (151-256)||(14077329-14077436)
chr1 (151-233)||(21072776-21072857)
chr1 (151-256)||(41568445-41568551)
chr1 (176-232)||(47601672-47601728)
chr1 (154-233)||(50631916-50631996)
[»] chr4 (60 HSPs)
chr4 (150-272)||(3716324-3716446)
chr4 (151-272)||(34280514-34280635)
chr4 (150-272)||(30539568-30539690)
chr4 (151-272)||(27538915-27539036)
chr4 (157-269)||(52589077-52589189)
chr4 (145-272)||(30342819-30342945)
chr4 (150-272)||(41759945-41760068)
chr4 (151-272)||(51436098-51436220)
chr4 (151-272)||(37855121-37855242)
chr4 (145-272)||(28037679-28037807)
chr4 (151-270)||(48066292-48066411)
chr4 (151-269)||(43137653-43137771)
chr4 (148-272)||(37519249-37519373)
chr4 (148-272)||(37523465-37523589)
chr4 (151-269)||(55722476-55722594)
chr4 (151-272)||(14802712-14802833)
chr4 (151-272)||(31908443-31908564)
chr4 (148-272)||(38835849-38835971)
chr4 (176-272)||(46041726-46041822)
chr4 (150-272)||(48579195-48579316)
chr4 (151-261)||(47302029-47302141)
chr4 (151-272)||(9858244-9858365)
chr4 (151-272)||(29646624-29646745)
chr4 (151-272)||(38975277-38975397)
chr4 (151-272)||(53389131-53389253)
chr4 (151-272)||(52809230-52809350)
chr4 (151-272)||(36091059-36091179)
chr4 (155-272)||(36592319-36592437)
chr4 (151-272)||(56361598-56361717)
chr4 (215-272)||(33076266-33076323)
chr4 (155-272)||(39162090-39162207)
chr4 (151-272)||(46216057-46216178)
chr4 (151-272)||(1414387-1414505)
chr4 (150-221)||(18425454-18425525)
chr4 (154-272)||(47302399-47302517)
chr4 (151-266)||(9356673-9356789)
chr4 (176-272)||(53695682-53695778)
chr4 (148-250)||(53936819-53936922)
chr4 (151-272)||(352757-352879)
chr4 (151-272)||(33491446-33491568)
chr4 (151-272)||(43363327-43363449)
chr4 (148-272)||(423147-423272)
chr4 (148-272)||(46004609-46004733)
chr4 (149-192)||(30891453-30891496)
chr4 (151-272)||(34828722-34828844)
chr4 (176-270)||(42881315-42881409)
chr4 (149-256)||(24291976-24292084)
chr4 (153-272)||(32289190-32289310)
chr4 (148-271)||(54996094-54996218)
chr4 (146-256)||(39380699-39380810)
chr4 (149-256)||(13548703-13548812)
chr4 (176-272)||(5970984-5971080)
chr4 (239-272)||(30891420-30891453)
chr4 (203-272)||(31998781-31998850)
chr4 (151-272)||(32737474-32737595)
chr4 (148-209)||(40438983-40439044)
chr4 (151-231)||(31681337-31681417)
chr4 (153-256)||(32570370-32570474)
chr4 (144-232)||(37992007-37992095)
chr4 (240-272)||(52591893-52591925)
[»] chr2 (47 HSPs)
chr2 (149-272)||(11227625-11227748)
chr2 (151-272)||(58920-59041)
chr2 (149-272)||(42427856-42427979)
chr2 (153-272)||(6884161-6884280)
chr2 (151-272)||(14533107-14533228)
chr2 (153-272)||(34665573-34665692)
chr2 (148-270)||(15771597-15771719)
chr2 (151-272)||(4673887-4674008)
chr2 (148-272)||(5091994-5092117)
chr2 (153-272)||(5389486-5389605)
chr2 (154-272)||(11813481-11813600)
chr2 (145-272)||(12547358-12547485)
chr2 (148-272)||(3383473-3383596)
chr2 (151-272)||(1353507-1353627)
chr2 (153-272)||(33423299-33423420)
chr2 (154-272)||(37083211-37083329)
chr2 (165-272)||(5420241-5420348)
chr2 (145-272)||(6438460-6438586)
chr2 (151-272)||(38963349-38963470)
chr2 (153-272)||(36489360-36489479)
chr2 (145-272)||(7467114-7467248)
chr2 (149-272)||(34438470-34438594)
chr2 (180-272)||(40370494-40370586)
chr2 (151-261)||(6513560-6513670)
chr2 (153-239)||(8371884-8371970)
chr2 (153-266)||(30980882-30980996)
chr2 (177-272)||(19636383-19636478)
chr2 (177-272)||(19834976-19835071)
chr2 (151-272)||(11598114-11598236)
chr2 (150-272)||(37909378-37909500)
chr2 (148-256)||(45157527-45157636)
chr2 (151-272)||(40947048-40947170)
chr2 (227-272)||(3810747-3810792)
chr2 (151-272)||(20212439-20212559)
chr2 (151-272)||(39620191-39620315)
chr2 (152-208)||(42046076-42046132)
chr2 (151-272)||(35896697-35896819)
chr2 (150-218)||(32499149-32499217)
chr2 (201-256)||(37425514-37425570)
chr2 (145-232)||(8362731-8362818)
chr2 (145-256)||(21425206-21425319)
chr2 (154-232)||(5615378-5615456)
chr2 (203-256)||(9122457-9122510)
chr2 (151-232)||(11088216-11088297)
chr2 (154-219)||(12071158-12071223)
chr2 (151-250)||(6945340-6945440)
chr2 (151-256)||(15176342-15176449)
[»] chr7 (45 HSPs)
chr7 (151-272)||(30862789-30862910)
chr7 (154-272)||(1691277-1691394)
chr7 (150-272)||(38129670-38129792)
chr7 (151-272)||(41913380-41913500)
chr7 (154-272)||(28326684-28326802)
chr7 (151-272)||(30624006-30624129)
chr7 (145-272)||(3909922-3910049)
chr7 (151-272)||(41381497-41381618)
chr7 (151-272)||(42710931-42711052)
chr7 (148-272)||(40941872-40941997)
chr7 (151-272)||(45857759-45857880)
chr7 (150-272)||(27956376-27956498)
chr7 (148-272)||(30936377-30936501)
chr7 (148-272)||(44964106-44964230)
chr7 (150-272)||(18990090-18990212)
chr7 (148-250)||(41331726-41331828)
chr7 (151-272)||(11485996-11486117)
chr7 (151-254)||(23331700-23331805)
chr7 (150-272)||(21699577-21699696)
chr7 (151-272)||(42974895-42975016)
chr7 (148-272)||(47748085-47748211)
chr7 (155-272)||(31482378-31482495)
chr7 (176-272)||(30317220-30317316)
chr7 (152-219)||(31903423-31903490)
chr7 (151-272)||(43069080-43069200)
chr7 (149-272)||(43750073-43750196)
chr7 (203-272)||(3214571-3214640)
chr7 (154-272)||(1806484-1806603)
chr7 (151-214)||(45458698-45458761)
chr7 (148-272)||(8770655-8770773)
chr7 (176-272)||(20439100-20439196)
chr7 (148-250)||(2290787-2290890)
chr7 (177-272)||(41809228-41809322)
chr7 (151-256)||(35291627-35291733)
chr7 (151-250)||(15715904-15716004)
chr7 (150-256)||(47219955-47220062)
chr7 (151-256)||(6791737-6791844)
chr7 (151-256)||(41968722-41968829)
chr7 (149-256)||(9682325-9682434)
chr7 (151-272)||(11750706-11750828)
chr7 (197-270)||(15584826-15584899)
chr7 (176-270)||(29682070-29682164)
chr7 (151-256)||(35357701-35357807)
chr7 (176-232)||(7527072-7527128)
chr7 (149-232)||(30076657-30076741)
[»] chr6 (29 HSPs)
chr6 (151-272)||(13390385-13390506)
chr6 (151-272)||(26358838-26358959)
chr6 (151-272)||(32834059-32834180)
chr6 (153-272)||(17545607-17545725)
chr6 (149-272)||(6848508-6848631)
chr6 (151-272)||(4110551-4110672)
chr6 (151-272)||(24212912-24213032)
chr6 (165-272)||(24487572-24487679)
chr6 (151-272)||(8401702-8401822)
chr6 (153-272)||(2258905-2259025)
chr6 (148-272)||(11446733-11446857)
chr6 (151-261)||(1096221-1096331)
chr6 (176-272)||(4901236-4901330)
chr6 (151-272)||(34196094-34196215)
chr6 (150-272)||(4509429-4509552)
chr6 (151-272)||(15383489-15383610)
chr6 (145-256)||(8549855-8549967)
chr6 (154-271)||(30020644-30020761)
chr6 (149-250)||(9661750-9661852)
chr6 (146-271)||(33573994-33574119)
chr6 (151-266)||(6265225-6265340)
chr6 (150-272)||(17010360-17010482)
chr6 (176-272)||(8376309-8376405)
chr6 (145-232)||(21181133-21181220)
chr6 (152-233)||(13719112-13719194)
chr6 (151-256)||(16892903-16893009)
chr6 (140-272)||(33574454-33574588)
chr6 (203-272)||(11763458-11763527)
chr6 (148-200)||(7344673-7344725)
[»] scaffold0077 (1 HSPs)
scaffold0077 (176-272)||(48035-48131)
[»] scaffold0005 (1 HSPs)
scaffold0005 (151-272)||(36894-37015)
[»] scaffold0625 (1 HSPs)
scaffold0625 (150-272)||(6548-6670)
[»] scaffold0432 (1 HSPs)
scaffold0432 (151-272)||(3314-3436)
[»] scaffold0604 (1 HSPs)
scaffold0604 (153-272)||(2022-2141)
[»] scaffold0113 (1 HSPs)
scaffold0113 (165-268)||(29259-29362)
[»] scaffold0060 (1 HSPs)
scaffold0060 (151-250)||(45761-45862)
[»] scaffold0775 (1 HSPs)
scaffold0775 (146-256)||(139-250)
[»] scaffold0072 (1 HSPs)
scaffold0072 (151-256)||(47875-47981)
[»] scaffold0184 (1 HSPs)
scaffold0184 (148-256)||(16883-16992)
[»] scaffold0174 (1 HSPs)
scaffold0174 (205-270)||(32617-32682)
[»] scaffold0078 (1 HSPs)
scaffold0078 (148-256)||(55852-55961)


Alignment Details
Target: chr3 (Bit Score: 106; Significance: 4e-53; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 42364333 - 42364212
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42364333 ggcaaattctatggtacacccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaataagttattttttgtaggaaaaaattatttt 42364234  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||||||||||||||    
T  42364233 ctatcacctatgattataataa 42364212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 38785489 - 38785367
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  38785489 tggcaaattatatggtacacccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattt 38785390  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||||||||||||||    
T  38785389 tctatcacctatgattataataa 38785367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 145 - 272
Target Start/End: Complemental strand, 44670670 - 44670543
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 244  Q
    ||||||||||||||||| | |||||||||  |||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||||||||||     
T  44670670 ttttatggcaaattctaaggtacacccaacaatttgagtgtattggtacacaaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaa 44670571  T
Q  245 tattttctatcacctatgattataataa 272  Q
    ||||||||||||||||| ||||||||||    
T  44670570 tattttctatcacctataattataataa 44670543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 154 - 272
Target Start/End: Complemental strand, 29347663 - 29347545
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 253  Q
    |||||||||| |||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  29347663 aaattctatggtacacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaattattttcta 29347564  T
Q  254 tcacctatgattataataa 272  Q
    |||||||| ||||||||||    
T  29347563 tcacctataattataataa 29347545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 11140247 - 11140367
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  11140247 ggcaaattctatggtacacccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgta-gaaaaaaatatttt 11140345  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  11140346 ctatcacctataattataataa 11140367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 29787003 - 29786882
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  29787003 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 29786904  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  29786903 ctatcacctataattataataa 29786882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 31308877 - 31308998
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||| ||  ||||||||||||||| ||| |||||||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  31308877 ggcaaattctatggtacacctaacaatttgagtgtattggaacaccaaatccttaaattaatagttaaatgagttattttttataggaaaaaattatttt 31308976  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||||||||||||||    
T  31308977 ctatcacctatgattataataa 31308998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 35171599 - 35171478
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||| |||| ||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  35171599 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaacccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 35171500  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  35171499 ctatcacctataattataataa 35171478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 42067579 - 42067700
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  42067579 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 42067678  T
Q  251 ctatcacctatgattataataa 272  Q
    | ||||||||| ||||||||||    
T  42067679 ccatcacctataattataataa 42067700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 876628 - 876507
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||| |||| |||||||||  |||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  876628 ggcaaattatatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgaaggaaaaaattatttt 876529  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  876528 ctatcacctataattataataa 876507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 40650067 - 40650188
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||| | ||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  40650067 ggcaagttctatggtacaactaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 40650166  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  40650167 ctatcacctataattataataa 40650188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 42848615 - 42848491
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggt--acatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||||| ||||||| |||||||||  ||||||||||||||||  ||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  42848615 tggcaagttctatggtacacccaacaatttgagtgtattggtgcacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattat 42848516  T
Q  248 tttctatcacctatgattataataa 272  Q
    |||||||||||||| ||||||||||    
T  42848515 tttctatcacctataattataataa 42848491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 44365621 - 44365745
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtagg---aaaaaattat 247  Q
    |||||||||||||||||||||||  |||| |||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||||   |||||| |||    
T  44365621 ggcaaattctatgatacacccaacaatttaagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaaaaatat 44365720  T
Q  248 tttctatcacctatgattataataa 272  Q
    |||||||||||||| ||||||||||    
T  44365721 tttctatcacctataattataataa 44365745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 47948801 - 47948679
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatt-ttttgtaggaaaaaattattt 249  Q
    ||||| |||||||||||||||||  |||| |||| ||||||||| |||||||||||||| |||||||||| ||||||| |||||||| ||||||||||||    
T  47948801 ggcaagttctatgatacacccaacaatttaagtgcattggtacaccaaatccttaaattaatagttaaatgagttatttttttgtagaaaaaaattattt 47948702  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  47948701 tctatcacctataattataataa 47948679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 151 - 261
Target Start/End: Complemental strand, 27082752 - 27082641
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaa-aaaattattt 249  Q
    ||||| ||||||| ||||| |||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  27082752 ggcaagttctatggtacactcaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaattattt 27082653  T
Q  250 tctatcacctat 261  Q
    ||||||||||||    
T  27082652 tctatcacctat 27082641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 45636089 - 45636209
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||| | |||||||||  ||||||||||||||||||| | |||  ||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  45636089 ggcaaattctagggtacacccaacaatttgagtgtattggtacaccgaatttttaaattaatagttaaatgagttattttttgtaggaaaaaa-tatttt 45636187  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| || |||||||    
T  45636188 ctatcacctataatcataataa 45636209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 39630297 - 39630175
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattga-tagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| |||| ||||  ||||||||||||| ||||| | |||  ||||||| | ||||||||| |||||||||||||||||||||| |||||    
T  39630297 ggcaaattctatggtacatccaacaatttgagtgtattagtacaccgaatttttaaattaaatagttaaatgagttattttttgtaggaaaaaaatattt 39630198  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  39630197 tctatcacctataattataataa 39630175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 272
Target Start/End: Original strand, 46959557 - 46959673
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 253  Q
    |||||||||  |||||| ||  |||||||||||||||||| |||||| |||||||| |||||||||| | ||| |||||||||||||||| |||||||||    
T  46959557 aaattctatcgtacacctaacaatttgagtgtattggtacgtcaaattcttaaattaatagttaaatgaatta-tttttgtaggaaaaaa-tattttcta 46959654  T
Q  254 tcacctatgattataataa 272  Q
    | |||||| ||||||||||    
T  46959655 tgacctataattataataa 46959673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 379070 - 379010
Alignment:
Q  212 tagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  379070 tagttaaatgagttattttttgtaggaaaaaattattttctatcacctataattataataa 379010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 4659757 - 4659877
Alignment:
Q  152 gcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttc 251  Q
    |||||||||||  || ||| ||  |||| || ||||||||||| |||||| ||||||| |||||||||| | |||  |||| ||||||||||||||||||    
T  4659757 gcaaattctatagtataccaaaaaatttaagggtattggtacaacaaatctttaaattaatagttaaatgaattacgttttttaggaaaaaattattttc 4659856  T
Q  252 tatcacctatgattataataa 272  Q
    |||||||||| ||||||||||    
T  4659857 tatcacctataattataataa 4659877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 52082435 - 52082307
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggta-------catcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaa 243  Q
    ||||||||||||| |||||| || ||| ||||||||||||||       ||||||||| ||||||  ||||||||||  ||||||||||| ||  |||||    
T  52082435 ggcaaattctatggtacacctaaagatatgagtgtattggtatttggtacatcaaatcattaaatcaatagttaaatgtgttattttttgaagagaaaaa 52082336  T
Q  244 ttattttctatcacctatgattataataa 272  Q
    |||||||||||||||||| ||||||||||    
T  52082335 ttattttctatcacctataattataataa 52082307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 27647478 - 27647599
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| ||||| |||  ||||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  27647478 ggcaaattctatggtacactcaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 27647577  T
Q  251 ctatcacctatgattataataa 272  Q
    | ||||||||| ||||||||||    
T  27647578 ccatcacctataattataataa 27647599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 40477759 - 40477879
Alignment:
Q  153 caaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttc 251  Q
    ||||||||||| ||||||||||  |||||||||||  |||||| | | || ||||||| ||||||||||||||||||||||| || |||| ||||||||     
T  40477759 caaattctatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttattttttgaagaaaaatattattttt 40477858  T
Q  252 tatcacctatgattataataa 272  Q
    |||||  ||| ||||||||||    
T  40477859 tatcatttataattataataa 40477879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 272
Target Start/End: Complemental strand, 43715156 - 43715033
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 248  Q
    ||||||||||||||| |||| ||||  ||||| ||||||||||||| ||||||  |||| | |||||||||    |||||||||| ||  ||||||| ||    
T  43715156 atggcaaattctatggtacatccaaaaatttgggtgtattggtacaccaaatcaataaactaatagttaaacgtattattttttgaagagaaaaattgtt 43715057  T
Q  249 ttctatcacctatgattataataa 272  Q
    ||||||||||||| ||||||||||    
T  43715056 ttctatcacctataattataataa 43715033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 9506903 - 9507025
Alignment:
Q  151 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||||||||||||||  ||||||||| || |||||| ||| || ||||||| |||||||||| |||| ||||||| |  |||| |||||||    
T  9506903 ggcaaattctatgatacacccaatatatttgagtgcatcggtacaccaattctttaaattaatagttaaatgagttgttttttgaaaaaaaatattattt 9507002  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||  ||| ||||||||||    
T  9507003 tttatcatttataattataataa 9507025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 9514878 - 9515000
Alignment:
Q  151 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||||||||||||||  ||||||||| || |||||| ||| || ||||||| |||||||||| |||| ||||||| |  |||| |||||||    
T  9514878 ggcaaattctatgatacacccaatatatttgagtgcatcggtacaccaattctttaaattaatagttaaatgagttgttttttgaaaaaaaatattattt 9514977  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||  ||| ||||||||||    
T  9514978 tttatcatttataattataataa 9515000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 23456454 - 23456576
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||  ||||||||||  |||||||||||| |||||||| | || ||||||| |||||||||| |||| ||||||| || |||| |||||||    
T  23456454 ggcaaattctatattacacccaatatatttgagtgtatcggtacatccactctttaaattaatagttaaatgagtttttttttgaagaaaaatattattt 23456553  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||  ||| ||||||||||    
T  23456554 tttatcatttattattataataa 23456576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 26885378 - 26885256
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||| |||| ||||||||||  |||||||||||| |||||| ||| || ||||||| |||||||||| |||| ||||||| || |||| |||||||    
T  26885378 ggcaaattttatggtacacccaatatatttgagtgtatcggtacaccaattctttaaattaatagttaaatgagttgttttttgaagaaaaatattattt 26885279  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||  ||| ||||||||||    
T  26885278 tttatcatttataattataataa 26885256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 21289219 - 21289098
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| ||||| |||  |||||||||||| |||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  21289219 ggcaaattctatggtacactcaaaaatttgagtgtataggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 21289120  T
Q  251 ctatcacctatgattataataa 272  Q
    | ||||||||| ||||||||||    
T  21289119 ccatcacctataattataataa 21289098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 266
Target Start/End: Complemental strand, 4663549 - 4663429
Alignment:
Q  146 tttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatt 245  Q
    |||| ||||| ||||||| ||||| |||   |||||||||||||||||||||||||  |||||| ||||||||||  ||||||||||| || |||   ||    
T  4663549 tttaaggcaagttctatggtacactcaaaattttgagtgtattggtacatcaaatcaataaattaatagttaaatgtgttattttttgaagaaaattttt 4663450  T
Q  246 attttctatcacctatgatta 266  Q
    ||||||||||| |||| ||||    
T  4663449 attttctatcatctataatta 4663429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 53516990 - 53516866
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||||||||||||||| |||||  ||  ||||||||||||||||||| | ||||   ||||| ||||||||||   |||||||||| ||  ||||||| |    
T  53516990 tatggcaaattctatggtacacttaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtattattttttgaagagaaaaattgt 53516891  T
Q  248 tttctatcacctatgattataataa 272  Q
    |||| ||||||||| ||||||||||    
T  53516890 tttccatcacctataattataataa 53516866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 27079785 - 27079711
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt 225  Q
    ||||| ||||||| ||||| |||  ||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  27079785 ggcaagttctatggtacactcaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagtt 27079711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 270
Target Start/End: Complemental strand, 45636062 - 45635968
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 270  Q
    |||||||||||  |||| | |||| ||||||||| ||||||||||||||||||||||| || |||| |||||||| |||||  ||| ||||||||    
T  45636062 atttgagtgtaccggtataccaaacccttaaatttatagttaaataagttattttttgaagaaaaatattattttttatcatttataattataat 45635968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 270
Target Start/End: Complemental strand, 42622256 - 42622136
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa-attatt 248  Q
    |||||||| |||| ||||||||||  |||||||||||  |||||| | | || ||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  42622256 ggcaaattttatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttattttttg-aggaaaaatattatt 42622158  T
Q  249 ttctatcacctatgattataat 270  Q
    || |||||  ||| ||||||||    
T  42622157 ttttatcatttataattataat 42622136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 3136295 - 3136391
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||| ||||||||||||| ||||||  |||||| ||||||||||  ||||||||||  ||  ||||||| |||| |||||||||| ||||||||||    
T  3136295 atttgggtgtattggtacaccaaatcaataaattaatagttaaatgtgttatttttttaagagaaaaattgttttatatcacctataattataataa 3136391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 266
Target Start/End: Complemental strand, 25592413 - 25592297
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||| |||| |||| ||||  |||||||||||||| |||| ||||||  |||||| |||||| |||  ||||||||||| ||  ||||||| |||    
T  25592413 tggcaaattatatggtacatccaaaaatttgagtgtattgatacaccaaatcaataaattaatagtttaatgtgttattttttgaagagaaaaattgttt 25592314  T
Q  250 tctatcacctatgatta 266  Q
    |||||||| ||| ||||    
T  25592313 tctatcacatataatta 25592297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 51344376 - 51344496
Alignment:
Q  153 caaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttc 251  Q
    ||||||||| ||||||||||||  |||||||||||  ||||||   | || ||||||| ||||||||||||||| ||||||| || |||| ||||||||     
T  51344376 caaattctacgatacacccaatatatttgagtgtacaggtacacacattctttaaattaatagttaaataagttgttttttgaagcaaaatattattttt 51344475  T
Q  252 tatcacctatgattataataa 272  Q
    |||||  ||| ||||||||||    
T  51344476 tatcatttataattataataa 51344496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 268
Target Start/End: Original strand, 19547487 - 19547606
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 248  Q
    ||||||||||||||| |||| ||||  |||||||||||| |||||| | ||||   ||||| ||||||||||  ||||||||||| ||  | ||||| ||    
T  19547487 atggcaaattctatggtacatccaaaaatttgagtgtatcggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagataaattgtt 19547586  T
Q  249 ttctatcacctatgattata 268  Q
    ||| ||||||||| ||||||    
T  19547587 ttccatcacctataattata 19547606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 29491658 - 29491745
Alignment:
Q  146 tttatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 232  Q
    |||| ||||||||||||| ||||||||||  |||||||||||  |||||| | | || ||||||| ||||||||||||||||||||||    
T  29491658 tttaaggcaaattctatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttatttttt 29491745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 33006298 - 33006421
Alignment:
Q  150 tggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 248  Q
    ||||||||| |||| ||||||||||| |||||||||||  |||||| | | |  ||||||| |||||||||| |||| ||||||| || |||| ||||||    
T  33006298 tggcaaattttatgctacacccaatgtatttgagtgtacaggtacacccactttttaaattaatagttaaatgagttgttttttgaagaaaaatattatt 33006397  T
Q  249 ttctatcacctatgattataataa 272  Q
    || |||||  ||| ||||||||||    
T  33006398 ttttatcatttattattataataa 33006421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 44522023 - 44522128
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| ||||  ||||  ||||||||||||||||||||  | || ||||||| |||||||||| |||||||||||  || |||| |||||||    
T  44522023 ggcaaattctatggtacattcaatatatttgagtgtattggtacattcactctttaaattaatagttaaatgagttatttttt-aagaaaaatattattt 44522121  T
Q  250 tctatca 256  Q
    |||||||    
T  44522122 tctatca 44522128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 270
Target Start/End: Complemental strand, 50030132 - 50030038
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 270  Q
    |||||||||||  |||| | |||| ||||||||| |||||||||| |||||||||||| || |||| |||||||| |||||  ||| ||||||||    
T  50030132 atttgagtgtacaggtataccaaacccttaaatttatagttaaatgagttattttttgaagaaaaatattattttttatcatttataattataat 50030038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 15996821 - 15996942
Alignment:
Q  152 gcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||||||| ||||||||||  |||| ||||||  |||||||| | |  ||||||| |||||||||| |||| ||||||| || |||| ||||||||    
T  15996821 gcaaattctatggtacacccaatatatttaagtgtaccggtacatctattttttaaattaatagttaaatgagttgttttttgaagaaaaatattatttt 15996920  T
Q  251 ctatcacctatgattataataa 272  Q
     |||||  ||| ||||||||||    
T  15996921 ttatcatttataattataataa 15996942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 16137029 - 16136932
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    ||||||||||||| |||| |||||  |||||||||||| |||||||| | || ||||||| |||||||||||| || ||||||| || |||| |||||    
T  16137029 ggcaaattctatggtacatccaatatatttgagtgtatcggtacatccactctttaaattaatagttaaataaattgttttttgaagaaaaatattat 16136932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 37491992 - 37492037
Alignment:
Q  227 ttttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  37491992 ttttttgtatgaaaaaattattttctatcacctataattataataa 37492037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 45290796 - 45290853
Alignment:
Q  215 ttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||  ||||||||||    
T  45290796 ttaaataagttattttttgaaggaaaaaattattttctaatacctagaattataataa 45290853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 45538998 - 45538929
Alignment:
Q  203 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||| ||||||||||||||||||||||| || |||| |||||||| |||||  ||| ||||||||||    
T  45538998 ttaaattaatagttaaataagttattttttgaagaaaaatattattttttatcatttataattataataa 45538929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 32636626 - 32636749
Alignment:
Q  151 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatt-att 248  Q
    ||||||||||||| ||||||||||  |||||||||||  | ||||   | |||||||||| |||||||||| |||| |||||||||| |||| |||  ||    
T  32636626 ggcaaattctatggtacacccaatatatttgagtgtaccgatacactcactccttaaattaatagttaaatgagttgttttttgtagaaaaatattgttt 32636725  T
Q  249 ttctatcacctatgattataataa 272  Q
    || |||||| ||| ||||||||||    
T  32636726 ttttatcacttataattataataa 32636749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 40021077 - 40021160
Alignment:
Q  149 atggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttt 231  Q
    ||||||||||||||| |||| |||||  ||||||||||| ||||||||| | || ||||||| |||||||||| |||| |||||    
T  40021077 atggcaaattctatggtacatccaatatatttgagtgtactggtacatccactctttaaattaatagttaaatgagttgttttt 40021160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 41282939 - 41282841
Alignment:
Q  153 caaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||| ||||||||| |||||  |||||||||||  |||||| | | || ||||||| ||||||||||||||| ||||||| || |||| ||||||||    
T  41282939 caaattttatgatacatccaatatatttgagtgtaccggtacacctattctttaaattaatagttaaataagttgttttttgaagaaaaatattatttt 41282841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 250
Target Start/End: Original strand, 31479559 - 31479656
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-aattatttt 250  Q
    ||||| |||| |||||| ||  |||||||||||| |||||| |||||  ||||||| ||| |||||| |||| |||||||||| |||| |||||||||    
T  31479559 aaattatatggtacacctaaaaatttgagtgtatcggtacaccaaattgttaaattaataattaaatgagtttttttttgtagaaaaataattatttt 31479656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 379277 - 379225
Alignment:
Q  157 ttctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaatt 209  Q
    ||||||| |||||||||  |||| |||||||||||||| ||||||||||||||    
T  379277 ttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaatt 379225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 32717678 - 32717774
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||||||||||||  ||||  |||||  |||||| ||||||||||   ||||||| || ||  ||||||| ||||||||||||||| ||||||||||    
T  32717678 atttgagtgtattaatacactaaatcaataaattaatagttaaatgtattattttctgaagagaaaaattgttttctatcacctataattataataa 32717774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 34593718 - 34593774
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 232  Q
    |||||||||||||| |||| |||||| ||||||| |||||||||| | |||||||||    
T  34593718 atttgagtgtattgttacaccaaatctttaaattaatagttaaattaattatttttt 34593774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 272
Target Start/End: Complemental strand, 1129532 - 1129414
Alignment:
Q  154 aaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    |||||||||| ||||| ||||  |||||||||||  |||||| | | || ||||||| ||||||||||||||| ||||||| || |||| ||| |||| |    
T  1129532 aaattctatggtacactcaatacatttgagtgtaccggtacacccactctttaaattaatagttaaataagttgttttttgaagaaaaatatt-tttttt 1129434  T
Q  253 atcacctatgattataataa 272  Q
    ||||  ||| ||||||||||    
T  1129433 atcatttataattataataa 1129414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 7352579 - 7352452
Alignment:
Q  146 tttatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 244  Q
    |||| ||||||||||||| |||| ||| |  |||||||||||| ||||||   | || ||||||| |||||||||| |||||||||||| |  || | ||    
T  7352579 tttaaggcaaattctatggtacatccactatatttgagtgtatcggtacactcactcattaaatttatagttaaatgagttattttttgaaaaaatatat 7352480  T
Q  245 tattttctatcacctatgattataataa 272  Q
    |||||| |||||  ||| ||||||||||    
T  7352479 tattttttatcatttataattataataa 7352452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 7671806 - 7671885
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttg 233  Q
    |||||||||| |||||||||  ||||||||||||||||||| | |||    ||||| ||||||||||  |||||||||||    
T  7671806 aaattctatggtacacccaaaaatttgagtgtattggtacacccaataaacaaattaatagttaaatgtgttattttttg 7671885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 8965941 - 8965996
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttt 231  Q
    ||||||||||| ||||||| || ||||||||||| |||||||||| | ||||||||    
T  8965941 atttgagtgtactggtacaccagatccttaaatttatagttaaatgaattattttt 8965996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 25482624 - 25482550
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||||||| |||||| | | || ||||||| |||||||||| |||| ||||||| || |||| ||||||||    
T  25482624 atttgagtgtatcggtacacctattctttaaattaatagttaaatgagttgttttttgaagaaaaatattatttt 25482550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 28718333 - 28718227
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtag-gaaaaaattattt 249  Q
    ||||||||||||| |||||||||   ||||||||||  ||| || |||| | ||||||| ||| |||||| |||| ||||||| ||  ||||||| ||||    
T  28718333 ggcaaattctatggtacacccaaaattttgagtgtaccggtgcaccaaacctttaaattaataattaaattagttgttttttgaagaaaaaaaatcattt 28718234  T
Q  250 tctatca 256  Q
    |||||||    
T  28718233 tctatca 28718227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 40473887 - 40473957
Alignment:
Q  203 ttaaattgatagttaaataagttattttttgtaggaaaaa-attattttctatcacctatgattataataa 272  Q
    ||||||| ||||||||||||||||| ||||| || ||||| |||||||| |||||  ||| ||||||||||    
T  40473887 ttaaattaatagttaaataagttatcttttgaagaaaaaatattattttttatcatttataattataataa 40473957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 54262894 - 54262840
Alignment:
Q  196 caaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||| ||||||||| |||||||||| |||||||||||| || |||| ||||||||    
T  54262894 caaacccttaaatttatagttaaatgagttattttttgaagaaaaatattatttt 54262840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 256
Target Start/End: Complemental strand, 5532454 - 5532345
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-aatta 246  Q
    |||| ||||||||||| |||| | ||  |||||||||||  |||||| |||||  ||||||| ||| |||| | |||| ||||||| || |||| |||||    
T  5532454 tatgacaaattctatggtacatctaaatatttgagtgtaccggtacaccaaataattaaattaatatttaattgagtttttttttgaagaaaaagaatta 5532355  T
Q  247 ttttctatca 256  Q
    ||||||||||    
T  5532354 ttttctatca 5532345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 25834284 - 25834353
Alignment:
Q  203 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||| ||||||||||||||| ||||||| |  |||| |||||||| |||||  ||| ||||||||||    
T  25834284 ttaaattaatagttaaataagttgttttttgaaaaaaaatattattttttatcatttataattataataa 25834353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 43745754 - 43745654
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa-attatt 248  Q
    ||||||||||||| ||||| ||||  |||||||| ||  |||||| | | || ||||||| ||||||||||||||| ||||||| |||||||| ||||||    
T  43745754 ggcaaattctatggtacactcaatatatttgagtataccggtacacccactctttaaattaatagttaaataagttgttttttg-aggaaaaatattatt 43745656  T
Q  249 tt 250  Q
    ||    
T  43745655 tt 43745654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 250
Target Start/End: Original strand, 8433437 - 8433537
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||| | |||||||||   |||||||||||  |||||| |||| ||||||| | |||||||||| ||||  |||||| || |||| |||||||    
T  8433437 ggcaaattctacggtacacccaacatatttgagtgtaccggtacaccaaacccttaaaattatagttaaatgagttggtttttgaagaaaaatattattt 8433536  T
Q  250 t 250  Q
    |    
T  8433537 t 8433537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 256
Target Start/End: Complemental strand, 50412480 - 50412372
Alignment:
Q  150 tggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt-attttttgtaggaaaaaattat 247  Q
    |||||||||||||| ||||||||||  |||||||||||  |||||||  | |  ||||||| || ||||||| ||||  ||||||| || |||| |||||    
T  50412480 tggcaaattctatggtacacccaatatatttgagtgtaccggtacatttactttttaaattaatggttaaatgagttgtttttttgaagaaaaatattat 50412381  T
Q  248 tttctatca 256  Q
    |||||||||    
T  50412380 tttctatca 50412372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 52162436 - 52162515
Alignment:
Q  190 gtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 270  Q
    ||||| |||| | ||||||| |||||||||| |||||||||||  || |||| |||||||| ||||  |||||||||||||    
T  52162436 gtacaccaaacctttaaatttatagttaaatgagttatttttttaagaaaaatattattttttatc-tctatgattataat 52162515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 15726296 - 15726175
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15726296 ggcaaattctatggtacatccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaataagttattttttgtaggaaaaaattatttt 15726197  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||||||||||||||    
T  15726196 ctatcacctatgattataataa 15726175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 35038240 - 35038103
Alignment:
Q  13 aatattaaaaacacaaacaatttaatgaacataagaaagcattttaaatggtaaatacatcttgaatactatggtcattttaatatcaataaacaaaata 112  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  35038240 aatattaaaaacacaaacaatttagtgaaaataagaaagcattttaaattgtaaatatatcttgaatactatgatcattttaatatcaataaacgaaata 35038141  T
Q  113 agctgtctattttgttttttcttctacgtaagttttat 150  Q
    || | |||||||||||||||||||||| ||||||||||    
T  35038140 agttctctattttgttttttcttctacttaagttttat 35038103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 145 - 272
Target Start/End: Original strand, 34332106 - 34332233
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 244  Q
    ||||||||||||||||||| |||||||||| |||| |||| ||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||     
T  34332106 ttttatggcaaattctatggtacacccaataatttaagtgcattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaa 34332205  T
Q  245 tattttctatcacctatgattataataa 272  Q
    ||||||||||||||||| ||||||||||    
T  34332206 tattttctatcacctataattataataa 34332233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 37161503 - 37161625
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||| ||||||| |||||||||  |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  37161503 tggcaagttctatgctacacccaacaatttgagtgtataggtacatcaaatccttaaattaatagttaaatgagttattttttataggaaaaaattattt 37161602  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  37161603 tctatcacctataattataataa 37161625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 14498709 - 14498588
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  14498709 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 14498610  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||| | ||||||||||    
T  14498609 ctatcacctgtaattataataa 14498588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 29773445 - 29773566
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| | |||||||||||||||||||| ||||||    
T  29773445 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgatttattttttgtaggaaaaaaatatttt 29773544  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  29773545 ctatcacctataattataataa 29773566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 38502184 - 38502305
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||||||||  |||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  38502184 ggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 38502283  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  38502284 ctatcacctataattataataa 38502305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 28090191 - 28090312
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||||||||| |||||||||| |||||||| |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| |||||    
T  28090191 tggcaaattctatggtacacccaataatttgagtatattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaa-tattt 28090289  T
Q  250 tctatcacctatgattataataa 272  Q
    || ||||||||| ||||||||||    
T  28090290 tccatcacctataattataataa 28090312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 23286565 - 23286686
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||| ||  ||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  23286565 ggcaaattctatggtacacctaacaatttgcgtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 23286664  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  23286665 ctatcacctataattataataa 23286686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 36002356 - 36002477
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||| ||||  ||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  36002356 ggcaagttctatggtacatccaacaatttgagtgtattagtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 36002455  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  36002456 ctatcacctataattataataa 36002477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 44934896 - 44935020
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||| ||||||||||| |||||||||  |||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||| |||    
T  44934896 tatgacaaattctatggtacacccaacaatttgaatgtattggtacatcaaatccttaaattaatagttaaatgagttattttttgcaggaaaaaaatat 44934995  T
Q  248 tttctatcacctatgattataataa 272  Q
    |||| ||||||||| ||||||||||    
T  44934996 tttccatcacctataattataataa 44935020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 37511088 - 37511209
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||| ||| |||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  37511088 ggcaaattcgatggtacacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 37511187  T
Q  251 ctatcacctatgattataataa 272  Q
    | ||||||||| ||||||||||    
T  37511188 ccatcacctataattataataa 37511209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 153 - 272
Target Start/End: Complemental strand, 12163347 - 12163228
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    ||||||||||| | |||||||  |||||| || ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||| |||||    
T  12163347 caaattctatggtgcacccaaccatttgaatgcattggtacatcaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaattaatttct 12163248  T
Q  253 atcacctatgattataataa 272  Q
    ||||||||| ||||||||||    
T  12163247 atcacctataattataataa 12163228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 153 - 272
Target Start/End: Complemental strand, 12407775 - 12407656
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    ||||||||||| | |||||||  |||||| || ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||| |||||    
T  12407775 caaattctatggtgcacccaaccatttgaatgcattggtacatcaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaattaatttct 12407676  T
Q  253 atcacctatgattataataa 272  Q
    ||||||||| ||||||||||    
T  12407675 atcacctataattataataa 12407656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 945976 - 946096
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||| | |||| ||||  ||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||| |||    
T  945976 ggcaaattctacggtacatccaaccatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaatta-ttt 946074  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  946075 ctatcacctataattataataa 946096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 29229583 - 29229463
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||| |||||||| |||||||| | ||||||||||||||||||||||||| |||    
T  29229583 ggcaaattctatggtacacccaaccatttgagtgtattggtacaccaaattcttaaattaatagttaagtgagttattttttgtaggaaaaaatta-ttt 29229485  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||| ||||| ||||||||||    
T  29229484 ctatcgcctataattataataa 29229463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 166 - 268
Target Start/End: Original strand, 10280575 - 10280677
Alignment:
Q  166 acacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgatt 265  Q
    ||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||    
T  10280575 acacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaattattttatatcacctataatt 10280674  T
Q  266 ata 268  Q
    |||    
T  10280675 ata 10280677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 29459633 - 29459755
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtagg-aaaaaattattt 249  Q
    |||||||| |||| |||||||||  |||||||||||||| |  ||||||| |||||||| |||||||||| |||||||||||||||| |||||| |||||    
T  29459633 ggcaaattttatggtacacccaacaatttgagtgtattgatctatcaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaaatattt 29459732  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  29459733 tctatcacctataattataataa 29459755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 2273010 - 2273131
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||| |||||| ||||||| ||||||||||  ||||||||||  ||  ||||||| ||||    
T  2273010 ggcaaattctatggtacacccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaatgtgttatttttttaagagaaaaattgtttt 2273109  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  2273110 ctatcacctataattataataa 2273131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 17642074 - 17642195
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||| |||| ||| |||||||||||||||| |||||| ||||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  17642074 ggcaaattctatggtacatccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 17642173  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  17642174 ctatcacctataattataataa 17642195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 261
Target Start/End: Original strand, 16323559 - 16323669
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||  |||||| ||||||||||  |||||| |||| ||  ||||||| ||||    
T  16323559 ggcaaattctatgatacacccaaagatttgagtgtattggtacaccaaatcaataaattaatagttaaatgtgttattatttgaagagaaaaattgtttt 16323658  T
Q  251 ctatcacctat 261  Q
    |||||||||||    
T  16323659 ctatcacctat 16323669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 37465684 - 37465805
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||| ||||  |||| |||||||||||||| ||||||  |||||| ||||||||||| ||||||||||| ||  ||||||||||||    
T  37465684 ggcaaattctatggtacatccaaaaatttaagtgtattggtacaccaaatcaataaattaatagttaaatatgttattttttgaagagaaaaattatttt 37465783  T
Q  251 ctatcacctatgattataataa 272  Q
     |||||||||| ||||||||||    
T  37465784 ttatcacctataattataataa 37465805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 42444624 - 42444503
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||| | || |||||||||||||||||||| |||||| ||||||| ||||||||||  | ||||||||| ||  ||||||||||||    
T  42444624 ggcaaattctatggtacatctaaagatttgagtgtattggtacaccaaatcattaaattaatagttaaatgtgctattttttgaagagaaaaattatttt 42444525  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||| ||| ||||||||||    
T  42444524 ctatcacttataattataataa 42444503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 43921127 - 43921246
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    |||||| |||| || ||| || |||||||||||||||||||| |||||| || || | |||||||||||  |||||||||  || |||||||||||||||    
T  43921127 caaattttatggtatacctaaagatttgagtgtattggtacaccaaatcattgaactaatagttaaatatattattttttaaagaaaaaaattattttct 43921226  T
Q  253 atcacctatgattataataa 272  Q
    ||||||||| ||||||||||    
T  43921227 atcacctataattataataa 43921246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 43049536 - 43049657
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||||||||| |||| ||||  |||||| |||||||||||| |||||| ||||||| || |||||||  ||||||||||| ||  ||||||| |||    
T  43049536 tggcaaattctatggtacatccaaaaatttgaatgtattggtacaccaaatcattaaattaat-gttaaatgtgttattttttgaagagaaaaattgttt 43049634  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  43049635 tctatcacctataattataataa 43049657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 529264 - 529388
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||||||||||||||| |||||  ||  ||||| ||||||||||||| ||| ||  |||||| ||||||||||  ||||||||||| ||  ||||||| |    
T  529264 tatggcaaattctatggtacactaaaaaatttgggtgtattggtacaccaagtcaataaattaatagttaaatgtgttattttttgaagagaaaaattgt 529363  T
Q  248 tttctatcacctatgattataataa 272  Q
    |||||||||||||| ||||||||||    
T  529364 tttctatcacctataattataataa 529388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 153 - 250
Target Start/End: Original strand, 1043060 - 1043158
Alignment:
Q  153 caaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||| ||||||||||  |||||||||||| |||||| | | || ||||||| ||||||||||||||||||||||| || |||| ||||||||    
T  1043060 caaattctatggtacacccaatatatttgagtgtatcggtacacccactctttaaattaatagttaaataagttattttttgaagaaaaatattatttt 1043158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 6800178 - 6800058
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||| |||| ||||| ||| |||||||||||||||||||| |||||| || |||| ||||||||||  ||| ||||||  ||  ||||||| ||||    
T  6800178 ggcaaattttatggtacactcaaagatttgagtgtattggtacaccaaatcattgaattaatagttaaatgtgtt-tttttttaagagaaaaattgtttt 6800080  T
Q  251 ctatcacctatgattataataa 272  Q
    |||| |||||| ||||||||||    
T  6800079 ctattacctataattataataa 6800058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 258
Target Start/End: Complemental strand, 19718757 - 19718650
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||| ||||  ||||||||||||| ||||| |||||| ||||||| ||| ||||||  ||||| ||||| ||  ||||||| ||||    
T  19718757 ggcaaattctatggtacatccaaaaatttgagtgtattagtacaccaaatcattaaattaataattaaatgtgttatattttgaagagaaaaattgtttt 19718658  T
Q  251 ctatcacc 258  Q
    ||||||||    
T  19718657 ctatcacc 19718650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 29454616 - 29454493
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatt-ttttgtaggaaaaaattatt 248  Q
    ||||||||||||| ||||||||||  |||||||||||  |||||| | | || ||||||| |||||||||||||||||| ||||| || |||| ||||||    
T  29454616 ggcaaattctatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttatttttttgaagaaaaatattatt 29454517  T
Q  249 ttctatcacctatgattataataa 272  Q
    || |||||  ||| ||||||||||    
T  29454516 ttttatcatttataattataataa 29454493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 272
Target Start/End: Complemental strand, 39347542 - 39347415
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 244  Q
    ||||| |||||||| |||| |||| | ||  |||||||||||||||||||| |||||  |||||| ||||||||||  ||||||||||  |   |||||     
T  39347542 ttttaaggcaaattttatggtacatcaaaaaatttgagtgtattggtacattaaatcaataaattaatagttaaatgtgttatttttttaaaagaaaaaa 39347443  T
Q  245 tattttctatcacctatgattataataa 272  Q
    |||||| |||||||||| ||||||||||    
T  39347442 tattttatatcacctataattataataa 39347415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 17792229 - 17792323
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 270  Q
    ||||||||||| ||||||| |||| ||||||||| |||||||||| ||||| |||||| || |||| |||||||| |||||  ||| ||||||||    
T  17792229 atttgagtgtactggtacaccaaacccttaaatttatagttaaatgagttactttttgaagaaaaatattattttttatcatttataattataat 17792323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 23274622 - 23274744
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtag-gaaaaaattattt 249  Q
    ||||||||||| | ||||| | |  |||||||||||||||| || |||||| ||||||| |||||||||  ||||||||||| |||  ||||||  | ||    
T  23274622 ggcaaattctacggtacactctacaatttgagtgtattggtgcaccaaatctttaaattaatagttaaaggagttattttttttagaaaaaaaaaaaatt 23274721  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  23274722 tctatcacctataattataataa 23274744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 4475046 - 4475166
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| | |||||||  ||||||||||||||||||| ||||||   ||||| ||||||||||   |||||||||| |  | |||| ||||||    
T  4475046 ggcaaattctatggt-cacccaaaaatttgagtgtattggtacaccaaatcaacaaattaatagttaaatctattattttttgaaaaataaaaatatttt 4475144  T
Q  251 ctatcacctatgattataataa 272  Q
    |||||| |||| ||||||||||    
T  4475145 ctatcatctataattataataa 4475166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 43485447 - 43485342
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||| |||| ||||| |||   |||||||||||||||||||||||||  |||||| ||||||||||  ||||||||||| || |||   |||||||    
T  43485447 ggcaaattttatggtacactcaaaattttgagtgtattggtacatcaaatcaataaattaatagttaaatgtgttattttttgaagaaaatttttatttt 43485348  T
Q  251 ctatca 256  Q
    ||||||    
T  43485347 ctatca 43485342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 26439931 - 26439808
Alignment:
Q  150 tggcaaattctatgatacacccaatga-tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 248  Q
    |||||||||||||| ||||| |||  | |||||||| ||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||    
T  26439931 tggcaaattctatggtacactcaaaaaatttgagtgcattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgtt 26439832  T
Q  249 ttctatcacctatgattataataa 272  Q
    ||| ||||||||| ||||||||||    
T  26439831 ttccatcacctataattataataa 26439808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 34633859 - 34633970
Alignment:
Q  147 ttatggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt-attttttgtaggaaaaaat 244  Q
    ||||| ||||||||||||||||||||||  |||||||||||| ||||||   | || ||||||| |||||||||| ||||  ||||||| || |||| ||    
T  34633859 ttatgacaaattctatgatacacccaatatatttgagtgtatcggtacactcactctttaaattaatagttaaatgagttgtttttttgaagaaaaatat 34633958  T
Q  245 tattttctatca 256  Q
    ||||||||||||    
T  34633959 tattttctatca 34633970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 4214902 - 4214802
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| ||||||||||  |||||||||||  |||| | | | || ||||||| |||||||||||| |||||||||| || |||| |||||||    
T  4214902 ggcaaattctatggtacacccaatatatttgagtgtaccggtatacccactctttaaattaatagttaaataaattattttttgaagaaaaatattattt 4214803  T
Q  250 t 250  Q
    |    
T  4214802 t 4214802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 36886543 - 36886447
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||||||| ||| |||||| |||||  ||||||| ||| ||||||| ||||| ||||| |   ||||||| ||||||||||||||| ||||||||||    
T  36886543 atttgagtatatcggtacaccaaattattaaattaataattaaatatgttatattttgaaaagaaaaattgttttctatcacctataattataataa 36886447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 272
Target Start/End: Complemental strand, 40777022 - 40776903
Alignment:
Q  154 aaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa-attattttc 251  Q
    |||||||||| |||||||||   ||||||||||||| ||||||  | |  ||||||| ||||||||||||||| ||||||| |||||||| ||||||||     
T  40777022 aaattctatggtacacccaaaatatttgagtgtattcgtacattcactttttaaattaatagttaaataagttgttttttg-aggaaaaatattattttt 40776924  T
Q  252 tatcacctatgattataataa 272  Q
    |||||  ||| ||||||||||    
T  40776923 tatcatttataattataataa 40776903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 6631312 - 6631190
Alignment:
Q  151 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| ||||||||||  |||||||||||  |||| | | | || ||||||| |||||||||| |||| ||||||| || |||| ||| |||    
T  6631312 ggcaaattctatggtacacccaatatatttgagtgtaccggtatacccattctttaaattaatagttaaattagttgttttttgaagaaaaatatttttt 6631213  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||  ||| ||||||||||    
T  6631212 tttatcatttataattataataa 6631190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 256
Target Start/End: Complemental strand, 29604421 - 29604314
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattat 247  Q
    |||||||||||||| ||||| ||||  ||||| ||||||||||||||||| | ||||||| ||| ||||||   || ||||||| || ||||  ||||||    
T  29604421 tggcaaattctatggtacactcaatattttgaatgtattggtacatcaaa-cattaaattaataattaaattgattgttttttgaagaaaaaataattat 29604323  T
Q  248 tttctatca 256  Q
    |||||||||    
T  29604322 tttctatca 29604314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 272
Target Start/End: Original strand, 41720241 - 41720370
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt-attttttgtaggaaaaa 242  Q
    ||||| || |||||||||| |||||||| |  |||||||||||| |||||| | | || ||||||| |||||||||| ||||  ||||||| || ||||     
T  41720241 ttttaaggtaaattctatggtacacccactatatttgagtgtatcggtacacccactctttaaattcatagttaaatgagttgtttttttgaagaaaaat 41720340  T
Q  243 attattttctatcacctatgattataataa 272  Q
    |||||||| |||||  ||| ||||||||||    
T  41720341 attattttttatcatttataattataataa 41720370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 45452740 - 45452671
Alignment:
Q  203 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||||||  |||||||||||||||||||||| || |||| |||||||| |||||  ||| ||||||||||    
T  45452740 ttaaattagtagttaaataagttattttttgaagaaaaatattattttttatcatttataattataataa 45452671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 266
Target Start/End: Complemental strand, 13483302 - 13483188
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| ||||| |||   |||| ||||||||| ||||||||||  |||||| |||| |||||  |||| |||||| || ||||  |||||||    
T  13483302 ggcaaattctatggtacactcaaaattttgggtgtattgggacatcaaatcaataaattaatagataaatgtgtta-tttttgaagaaaaatgttatttt 13483204  T
Q  251 ctatcacctatgatta 266  Q
    |||||| |||| ||||    
T  13483203 ctatcatctataatta 13483188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 39300495 - 39300412
Alignment:
Q  151 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttg 233  Q
    ||||||||||||| ||||||||||  |||||| |||| || |||||| | || ||||||| |||||||||| |||| |||||||    
T  39300495 ggcaaattctatggtacacccaatatatttgaatgtactgctacatccactctttaaattaatagttaaatgagttgttttttg 39300412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 2749713 - 2749608
Alignment:
Q  151 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| ||||||||||  |||||||||||   ||||||| | || ||||||| || ||||||| ||||  |||||| || |||| |||||||    
T  2749713 ggcaaattctatggtacacccaatatatttgagtgtacctgtacatccactctttaaattaatggttaaatgagtt-gtttttgaagaaaaatattattt 2749615  T
Q  250 tctatca 256  Q
    |||||||    
T  2749614 tctatca 2749608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 250
Target Start/End: Complemental strand, 15451861 - 15451755
Alignment:
Q  145 ttttatggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaa 243  Q
    ||||| || ||||||||||||||| |||||  |||| ||||||| |||||| | | |  ||||||| |||||||||| ||||||| |||| || |||| |    
T  15451861 ttttaaggtaaattctatgatacatccaatatatttaagtgtatgggtacacctattttttaaattaatagttaaatgagttattctttgaagaaaaata 15451762  T
Q  244 ttatttt 250  Q
    |||||||    
T  15451761 ttatttt 15451755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 27171940 - 27172033
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 270  Q
    |||||||||||  |||||| |||| | ||||||| |||||||||| ||||| |||||| || |||| |||||||| |||||  ||| ||||||||    
T  27171940 atttgagtgtaccggtacaccaaaccgttaaatttatagttaaatgagtta-tttttgaagaaaaatattattttttatcatttataattataat 27172033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 2261027 - 2261112
Alignment:
Q  149 atggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttg 233  Q
    ||||||||||||||| ||||| ||||  |||||||||||  |||||| | | || ||||||| ||| ||||||||||| |||||||    
T  2261027 atggcaaattctatggtacactcaatatatttgagtgtaccggtacacccactctttaaattaataattaaataagttgttttttg 2261112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 232
Target Start/End: Complemental strand, 5215730 - 5215646
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 232  Q
    ||||||||||| |||| ||||| ||||  ||||||||||| ||||||  ||| | ||||||| ||| |||||| |||| ||||||    
T  5215730 tatggcaaattttatggtacactcaatattttgagtgtatcggtacacaaaaacattaaattaataattaaattagttgtttttt 5215646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 17096687 - 17096581
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattatt 248  Q
    ||||||||||||| |||||||||   ||||||||||| |||||| |||| | ||||||| ||| ||||||   || ||||||| || ||||  |||||||    
T  17096687 ggcaaattctatggtacacccaacattttgagtgtatcggtacaccaaa-cattaaattaataattaaattgattgttttttgaagaaaaaataattatt 17096589  T
Q  249 ttctatca 256  Q
    ||||||||    
T  17096588 ttctatca 17096581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 256
Target Start/End: Complemental strand, 28897313 - 28897203
Alignment:
Q  148 tatggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aat 244  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||||||| ||| || | ||||| |||  ||||| |||| ||||||  | |||||  |||    
T  28897313 tatggcaaattctatggtacacccaataaatttgggtgtattggtacaccaagtcataaaattaata-ataaatgagttgtttttttgaagaaaaataat 28897215  T
Q  245 tattttctatca 256  Q
    ||||||||||||    
T  28897214 tattttctatca 28897203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 34047825 - 34047765
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaatt 209  Q
    ||||||||||||||| |||||||||  |||||||||||  |||||| |||||  |||||||    
T  34047825 atggcaaattctatggtacacccaacaatttgagtgtaccggtacaccaaattattaaatt 34047765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 39721967 - 39722039
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaat 220  Q
    |||||||||||||||| ||||| |||  ||||||||||||  |||||||| ||  ||||||| ||| ||||||    
T  39721967 tatggcaaattctatggtacactcaaatatttgagtgtatccgtacatcagataattaaattaatatttaaat 39722039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 272
Target Start/End: Original strand, 40578687 - 40578815
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaa 243  Q
    |||||||| |||||||||| |||| ||| |  |||| |||||||||||| |   | || ||||||| |||||||||| |||||||||||| |  || | |    
T  40578687 ttttatggtaaattctatggtacatccactatatttaagtgtattggtatactcactctttaaattcatagttaaatgagttattttttggaaaaatata 40578786  T
Q  244 ttattttctatcacctatgattataataa 272  Q
    ||||||| |||||  ||| ||||||||||    
T  40578787 ttattttttatcatttataattataataa 40578815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 6560828 - 6560947
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    ||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  6560828 caaattctatggtacacccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattttct 6560927  T
Q  253 atcacctatgattataataa 272  Q
    ||||||||||||||||||||    
T  6560928 atcacctatgattataataa 6560947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 43237760 - 43237638
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||||||||| |||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| |||||    
T  43237760 tggcaaattctatggtacacccaataatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaatattt 43237661  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||||||||||||||    
T  43237660 tctatcacctatgattataataa 43237638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 34302646 - 34302769
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtta--ttttttgtaggaaaaaattatt 248  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||  ||||||||||||||||||||||    
T  34302646 ggcaaattctatggtacacccaataatttgagtgtattggtacatcaaatccttaaattaatagttaaatgagttattttttttgtaggaaaaaattatt 34302745  T
Q  249 ttctatcacctatgattataataa 272  Q
    || |||||||||||||||||||||    
T  34302746 ttttatcacctatgattataataa 34302769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 6532579 - 6532700
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||||||  |||| |||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||    
T  6532579 ggcaaattctatggtacacccaacaatttaagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 6532678  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  6532679 ctatcacctataattataataa 6532700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 1662100 - 1661979
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||||||||  |||||||||||||||||||  ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  1662100 ggcaagttctatggtacacccaacaatttgagtgtattggtacacaaaatccttaaattaatagttaaatgggttattttttgtaggaaaaaattatttt 1662001  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  1662000 ctatcacctataattataataa 1661979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 2141242 - 2141363
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| || |||| || ||||||| ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||    
T  2141242 ggcaagttttatggtagacccaataatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 2141341  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  2141342 ctatcacctataattataataa 2141363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 2029352 - 2029474
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||||| ||| |||| | ||  |||| |||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  2029352 tggcaaattccatggtacatctaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattt 2029451  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  2029452 tctatcacctataattataataa 2029474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 9589209 - 9589330
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| ||||||||| ||| |||||||||||| ||| |||||| ||||||| ||||||||||| ||||||||||| || |||||||||||||    
T  9589209 ggcaaattctatggtacacccaaagatatgagtgtattggcacaccaaatcattaaattaatagttaaatatgttattttttgaagaaaaaaattatttt 9589308  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  9589309 ctatcacctataattataataa 9589330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 152 - 272
Target Start/End: Original strand, 3056386 - 3056506
Alignment:
Q  152 gcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttc 251  Q
    |||| ||||||| |||||||||  |||| |||||||||||||| |||||  ||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  3056386 gcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatttttaaattaatagttaaatgagttattttttgtaggaaaaaattattttc 3056485  T
Q  252 tatcacctatgattataataa 272  Q
    |||||||||| ||||||||||    
T  3056486 tatcacctataattataataa 3056506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 21605645 - 21605769
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||| ||||||||||| |||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||| |||||||||| |||    
T  21605645 tatgacaaattctatggtacacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttataggaaaaaaatat 21605744  T
Q  248 tttctatcacctatgattataataa 272  Q
    |||| ||||||||| ||||||||||    
T  21605745 tttccatcacctataattataataa 21605769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 24097873 - 24097992
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    ||||||||||| || ||||||| ||||||||||| ||||||| |||||  ||||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  24097873 caaattctatggtaaacccaatcatttgagtgtaatggtacaccaaattattaaattaatagttcaatgagttattttttgtaggaaaaaattattttct 24097972  T
Q  253 atcacctatgattataataa 272  Q
    ||||||||| ||||||||||    
T  24097973 atcacctataattataataa 24097992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 154 - 272
Target Start/End: Original strand, 32467046 - 32467164
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 253  Q
    ||||| |||| ||||| |||| |||| ||||||||||||||||||||| ||||||| |||||| ||| | ||||||||||||||||||||||||||||||    
T  32467046 aaattatatggtacactcaatcatttaagtgtattggtacatcaaatcattaaattaatagttcaatgaattattttttgtaggaaaaaattattttcta 32467145  T
Q  254 tcacctatgattataataa 272  Q
    |||||||| ||||||||||    
T  32467146 tcacctataattataataa 32467164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 6114180 - 6114059
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||| ||||  |||||||||||||||| || |||||||||||||| |||||||||| ||||||||||||||| |||||| ||||||    
T  6114180 ggcaaattctatggtacatccaacaatttgagtgtattggtccaccaaatccttaaattaatagttaaatgagttattttttgtagaaaaaaaatatttt 6114081  T
Q  251 ctatcacctatgattataataa 272  Q
    | ||||||||| ||||||||||    
T  6114080 ccatcacctataattataataa 6114059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 157 - 272
Target Start/End: Complemental strand, 18228859 - 18228744
Alignment:
Q  157 ttctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatca 256  Q
    ||||||| |||||| ||  ||||||||||||||||| | |||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||    
T  18228859 ttctatggtacacctaacaatttgagtgtattggtataccaaatccttaaattaatagttaaatgagttattttttgtgggaaaaaattattttctatca 18228760  T
Q  257 cctatgattataataa 272  Q
    ||| | ||||||||||    
T  18228759 cctgtaattataataa 18228744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 42917117 - 42917239
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat-tattt 249  Q
    ||||||||||||| | |||||||  ||||||||||||||||||| ||||| |||||||| |||||||||| ||||| ||||||||| ||||||| |||||    
T  42917117 ggcaaattctatggtgcacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttactttttgtagaaaaaaatatattt 42917216  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  42917217 tctatcacctataattataataa 42917239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 149 - 272
Target Start/End: Original strand, 9534868 - 9534988
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 248  Q
    ||||||| ||||||| || || |||| ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||   |||||||||||||||    
T  9534868 atggcaagttctatggtagactcaataatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttatttt---taggaaaaaattatt 9534964  T
Q  249 ttctatcacctatgattataataa 272  Q
    ||||||||||||| ||||||||||    
T  9534965 ttctatcacctataattataataa 9534988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 2413927 - 2414045
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| || || |||| ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||   |||||||||||||||||    
T  2413927 ggcaagttctatggtagactcaataatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttatttt---taggaaaaaattatttt 2414023  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  2414024 ctatcacctataattataataa 2414045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 272
Target Start/End: Complemental strand, 4618124 - 4617997
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 244  Q
    ||||| |||||||| |||| |||||| ||  ||||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||||| ||  ||||||    
T  4618124 ttttaaggcaaattttatggtacacctaaaaatttgagtgtattggtacaccaaatcaataaattaatagttaaatatgttattttttgaagagaaaaat 4618025  T
Q  245 tattttctatcacctatgattataataa 272  Q
    ||||||||||||||||| ||||||||||    
T  4618024 tattttctatcacctataattataataa 4617997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 154 - 272
Target Start/End: Original strand, 13410545 - 13410662
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 253  Q
    ||||| |||| |||| ||||  ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||| |    
T  13410545 aaattttatggtacatccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaa-tattttcca 13410643  T
Q  254 tcacctatgattataataa 272  Q
    |||||||| ||||||||||    
T  13410644 tcacctataattataataa 13410662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 272
Target Start/End: Original strand, 13090917 - 13091035
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 253  Q
    |||||||||| ||||||||| ||| |||||||||||||||| |||||  ||||||| ||||||||||  ||||||||||| ||  ||||||| |||||||    
T  13090917 aaattctatggtacacccaaagatatgagtgtattggtacaccaaattattaaattaatagttaaatgtgttattttttgaagagaaaaattgttttcta 13091016  T
Q  254 tcacctatgattataataa 272  Q
    |||||||| ||||||||||    
T  13091017 tcacctataattataataa 13091035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 41802106 - 41802227
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||| || | ||||||||| | || ||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||| ||  ||||||||||||    
T  41802106 ggcaaattttacggtacacccaaaggttcgagtgtattggtacaccaaatcattaaattaatagttaaatatgttattttttgaagagaaaaattatttt 41802205  T
Q  251 ctatcacctatgattataataa 272  Q
    |||||| |||| ||||||||||    
T  41802206 ctatcatctataattataataa 41802227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 272
Target Start/End: Original strand, 14967235 - 14967353
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 253  Q
    |||||||||| ||||||||| ||| ||||||||||||||||  ||||| |||||||  |||||||||  ||||||||||  ||  ||||||| |||||||    
T  14967235 aaattctatggtacacccaaagatatgagtgtattggtacactaaatcattaaattagtagttaaatgtgttattttttaaagagaaaaattgttttcta 14967334  T
Q  254 tcacctatgattataataa 272  Q
    |||||||| ||||||||||    
T  14967335 tcacctataattataataa 14967353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 272
Target Start/End: Complemental strand, 36752620 - 36752494
Alignment:
Q  147 ttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatt-ttttgtaggaaaaaatt 245  Q
    ||||||||||||| | | |||| ||||  ||||||||||| ||||| |  ||||||||||||| |||||||||| | ||||| ||||||||||||||| |    
T  36752620 ttatggcaaattccacggtacatccaacaatttgagtgtagtggtatacaaaatccttaaattaatagttaaatgaattattattttgtaggaaaaaaat 36752521  T
Q  246 attttctatcacctatgattataataa 272  Q
    |||||| ||||||||| ||||||||||    
T  36752520 attttccatcacctataattataataa 36752494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 29743895 - 29744017
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaa-ttgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||| |||| ||||  |||  |||| |||||||||||||| |||||||||||| || | ||||||||  ||||||||||| || ||||||||||||    
T  29743895 ggcaaattatatggtacattcaaaaatttaagtgtattggtacaccaaatccttaaaattaagagttaaatgtgttattttttgaagaaaaaaattattt 29743994  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||  ||||||||||    
T  29743995 tctatcacctaaaattataataa 29744017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 35817729 - 35817644
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctat 261  Q
    |||||||||||||| |||| ||||   ||||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||    
T  35817729 atttgagtgtattgatacaccaaaattttaaattaatagttaaatgagttattttttgaagaaaaaaattattttctatcacctat 35817644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 21051711 - 21051600
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||||||||| |||| | || ||||||| |||||||||||| ||||||  |||||| ||||||||||  ||||||||||| ||  ||||||| ||     
T  21051711 tggcaaattctatggtacatctaaagatttgaatgtattggtacaccaaatcaataaattaatagttaaatgtgttattttttgaagagaaaaattgttg 21051612  T
Q  250 tctatcacctat 261  Q
    ||||||||||||    
T  21051611 tctatcacctat 21051600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 28332119 - 28332242
Alignment:
Q  150 tggcaaattctatgatacacccaatga-tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 248  Q
    |||||||||||||| ||||| |||  | |||||||||||||||||| ||||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||    
T  28332119 tggcaaattctatggtacactcaaaaaatttgagtgtattggtacaccaaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgtt 28332218  T
Q  249 ttctatcacctatgattataataa 272  Q
    ||| ||||||||| ||||||||||    
T  28332219 ttccatcacctataattataataa 28332242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 12362765 - 12362643
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||||||||| ||||| |||  |||| |||||||||||||| | ||||  |||||| ||||||||||   |||||||||| ||  ||||||| |||    
T  12362765 tggcaaattctatggtacactcaaaaatttaagtgtattggtacacccaatcaataaattaatagttaaatgtcttattttttgaagagaaaaattgttt 12362666  T
Q  250 tctatcacctatgattataataa 272  Q
    || ||||||||| ||||||||||    
T  12362665 tccatcacctataattataataa 12362643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 272
Target Start/End: Original strand, 27116465 - 27116583
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 253  Q
    ||||| |||| |||||||||  ||||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||| |    
T  27116465 aaattttatggtacacccaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgttttcca 27116564  T
Q  254 tcacctatgattataataa 272  Q
    |||||||| ||||||||||    
T  27116565 tcacctataattataataa 27116583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 272
Target Start/End: Complemental strand, 37431744 - 37431633
Alignment:
Q  165 tacacccaatgatttgagtgtattggtacatcaaatcctt---aaattgatagttaaataagttattttttgtag-gaaaaaattattttctatcaccta 260  Q
    ||||| ||| |||||||||||||||||||| ||||||  |   ||||| ||||||||||  ||||||||||| || ||||||||| |||||| |||||||    
T  37431744 tacactcaaagatttgagtgtattggtacaccaaatcaattataaattaatagttaaatgtgttattttttgaagagaaaaaattgttttctttcaccta 37431645  T
Q  261 tgattataataa 272  Q
    ||||||||||||    
T  37431644 tgattataataa 37431633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 272
Target Start/End: Complemental strand, 13795678 - 13795555
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 248  Q
    |||| |||||||||| |||| | ||  ||||||||| ||||||||| | ||||  |||||| ||||||||||  ||||||||||| ||  ||||| ||||    
T  13795678 atggtaaattctatggtacatcaaaaaatttgagtgcattggtacacctaatcaataaattaatagttaaatgtgttattttttgaagagaaaaaatatt 13795579  T
Q  249 ttctatcacctatgattataataa 272  Q
    || |||||||||| ||||||||||    
T  13795578 ttatatcacctataattataataa 13795555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 270
Target Start/End: Complemental strand, 13645889 - 13645795
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 270  Q
    |||||||||||  ||||||||||| | | ||||| |||||||||| |||| ||||||| || |||| |||||||| |||||  ||||||||||||    
T  13645889 atttgagtgtaccggtacatcaaaccttaaaatttatagttaaatgagttgttttttgaagaaaaatattattttttatcatttatgattataat 13645795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 32455328 - 32455422
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 270  Q
    |||||||||||  |||||||||||  ||||| || |||||||||| |||||||||||| || |||| |||||||| |||||  ||| ||||||||    
T  32455328 atttgagtgtaccggtacatcaaactcttaagtttatagttaaatgagttattttttgaagaaaaatattattttttatcatttataattataat 32455422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 270
Target Start/End: Complemental strand, 38355097 - 38355003
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 270  Q
    ||||||||||| ||||||| ||||  |||||||| |||||||||| |||||||||||| |  |||| |||||||| |||||  ||| ||||||||    
T  38355097 atttgagtgtactggtacaccaaactcttaaatttatagttaaatgagttattttttgaacaaaaatattattttttatcatttataattataat 38355003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 13118854 - 13118923
Alignment:
Q  203 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||| ||||||||||||||||||||||| || |||| |||||||| |||||  ||| ||||||||||    
T  13118854 ttaaattaatagttaaataagttattttttgaagaaaaatattattttttatcatttataattataataa 13118923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 256
Target Start/End: Complemental strand, 14096798 - 14096705
Alignment:
Q  163 gatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatca 256  Q
    ||||||| |||  |||||||||||||| |||| |||||  ||||||| ||| | ||||||||||||||||| || ||| ||||||||| |||||    
T  14096798 gatacacacaaaaatttgagtgtattgatacaccaaattgttaaattaataatcaaataagttattttttgaagaaaagaattattttttatca 14096705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 42486959 - 42486890
Alignment:
Q  203 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||| ||||||||||||||||||||||| || |||| |||||||| |||||  ||| ||||||||||    
T  42486959 ttaaattaatagttaaataagttattttttgaagaaaaatattattttatatcatttataattataataa 42486890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 268
Target Start/End: Complemental strand, 2318807 - 2318715
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattata 268  Q
    ||||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||| ||||||||| ||||||    
T  2318807 atttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgttttccatcacctataattata 2318715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 25929554 - 25929642
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 232  Q
    |||| |||||||||||||| ||||||||||  |||||||||||  |||| | | | || ||||||| ||||||||||||||||||||||    
T  25929554 ttttttggcaaattctatggtacacccaatatatttgagtgtacgggtatacccactctttaaattaatagttaaataagttatttttt 25929642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 266
Target Start/End: Complemental strand, 3425481 - 3425369
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    ||||||||||||||||| |||   |||| |||||||||||||||||||   |||||| |||| |||||  |||| |||||| || ||||  |||||||||    
T  3425481 caaattctatgatacactcaaaattttgggtgtattggtacatcaaattaataaattaatagataaatgtgtta-tttttgaagaaaaatgttattttct 3425383  T
Q  253 atcacctatgatta 266  Q
    |||| |||| ||||    
T  3425382 atcatctataatta 3425369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 35682122 - 35682179
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttg 233  Q
    ||||||||||||||||||| || ||||||||||| || ||||||| ||||| ||||||    
T  35682122 atttgagtgtattggtacaccatatccttaaattaattgttaaatgagttactttttg 35682179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 3881864 - 3881938
Alignment:
Q  182 gtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-aattattttctatca 256  Q
    ||||||||||||| |||||| | ||||| ||| | ||||||||||||||||| || |||| |||||||||||||||    
T  3881864 gtgtattggtacaccaaatcataaaattaataat-aaataagttattttttgaagaaaaataattattttctatca 3881938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 256
Target Start/End: Complemental strand, 23259149 - 23259046
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt-attttttgtaggaaaaaattattttct 252  Q
    ||||| |||| |||||| ||  ||||||||||||  |||||||||||  ||||||| ||| |||||| ||||  ||||||| || ||| |||||||||||    
T  23259149 aaattttatggtacacctaagtatttgagtgtatctgtacatcaaataattaaattaatatttaaatgagttgtttttttgaagaaaagaattattttct 23259050  T
Q  253 atca 256  Q
    ||||    
T  23259049 atca 23259046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 29996509 - 29996592
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttg 233  Q
    |||||||||||||| |||| ||||  || ||||||||| | ||||||||||| ||||||  ||| |||||| |||| |||||||    
T  29996509 tggcaaattctatggtacatccaaaaatatgagtgtatcgttacatcaaatcgttaaatcaataattaaatgagttgttttttg 29996592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 33145264 - 33145210
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaa 207  Q
    ||||||||||| |||||||||  || |||||||||||||||| |||||| |||||    
T  33145264 caaattctatggtacacccaaaaatatgagtgtattggtacaccaaatcattaaa 33145210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 36880818 - 36880896
Alignment:
Q  183 tgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctat 261  Q
    |||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||||||||| |||||||||    
T  36880818 tgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattattttccatcacctat 36880896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 16433057 - 16432976
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 232  Q
    |||||||| |||| |||| ||||| |||||||||||   ||||| ||||||||||| || ||| |||||| |||| ||||||    
T  16433057 ggcaaattttatggtacatccaattatttgagtgtaccagtacaccaaatccttaatttaataattaaatgagttgtttttt 16432976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 22780590 - 22780631
Alignment:
Q  227 ttttttgtaggaaaaaattattttctatcacctatgattata 268  Q
    |||||||||||||||||| |||||||||||||| | ||||||    
T  22780590 ttttttgtaggaaaaaataattttctatcacctgtaattata 22780631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 257
Target Start/End: Original strand, 39979368 - 39979476
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattatt 248  Q
    |||||||||||||||||| | |||  |||||||||| || | ||||||| | | ||||| |||  ||||| |||| ||||||| || ||||  |||||||    
T  39979368 ggcaaattctatgatacatctaatattttgagtgtactgctccatcaaagcatcaaattaataagtaaattagttgttttttgaagaaaaaataattatt 39979467  T
Q  249 ttctatcac 257  Q
    |||||||||    
T  39979468 ttctatcac 39979476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 256
Target Start/End: Original strand, 33210372 - 33210476
Alignment:
Q  153 caaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttc 251  Q
    ||||||||||| ||||||||||  |||||||||||  ||||||   | || ||||||| || ||||||| |||| | ||||| || |||| |||||||||    
T  33210372 caaattctatggtacacccaatatatttgagtgtaccggtacactcactctttaaattaatggttaaatgagttgtcttttgaagaaaaatattattttc 33210471  T
Q  252 tatca 256  Q
    |||||    
T  33210472 tatca 33210476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 250
Target Start/End: Original strand, 33678155 - 33678255
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| |||||||| |  |||||||||||  ||||||   | || ||||||| |||||||||| |||||||||||| |  |||| |||||||    
T  33678155 ggcaaattctatggtacacccactatatttgagtgtaccggtacactcactctttaaattcatagttaaatgagttattttttgaaaaaaaatattattt 33678254  T
Q  250 t 250  Q
    |    
T  33678255 t 33678255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 36339255 - 36339160
Alignment:
Q  149 atggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 244  Q
    ||||||||||||||| ||||||||||  |||||||||||  ||||||   | || ||||||| || ||||||| |||| ||||||| ||||||||||    
T  36339255 atggcaaattctatggtacacccaatatatttgagtgtaccggtacactcattctttaaattaatggttaaatgagttgttttttg-aggaaaaaat 36339160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 39041707 - 39041667
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagtt 216  Q
    |||||||||||||||||||  ||||||||||||| ||||||    
T  39041707 atttgagtgtattggtacactaaatccttaaatttatagtt 39041667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 51984936 - 51985055
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  51984936 caaattctatggtacactcaataatttgagtgtattggtacatcaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattttct 51985035  T
Q  253 atcacctatgattataataa 272  Q
    ||||||||||||||||||||    
T  51985036 atcacctatgattataataa 51985055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 154 - 272
Target Start/End: Complemental strand, 51781507 - 51781389
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 253  Q
    |||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  51781507 aaattctatggtacacccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattttcta 51781408  T
Q  254 tcacctatgattataataa 272  Q
    |||||||||||||||||||    
T  51781407 tcacctatgattataataa 51781389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 52303013 - 52303134
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| |||||||||| ||||||    
T  52303013 ggcaaattctatgatacacccaataatttgagtgtattggtacatcaaattcttaaattaatagttaaatgagttattttttataggaaaaaaatatttt 52303112  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  52303113 ctatcacctattattataataa 52303134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 16482576 - 16482696
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||||||| |||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  16482576 ggcaaattctatggtacacccaataatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtagg-aaaaattatttt 16482674  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||||||||||||||    
T  16482675 ctatcacctatgattataataa 16482696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 28493810 - 28493931
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||||||| |||| ||||||||| |||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  28493810 ggcaaattctatggtacacccaataatttaagtgtattgttacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 28493909  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  28493910 ctatcacctataattataataa 28493931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 151 - 271
Target Start/End: Original strand, 50905581 - 50905701
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||| | |||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  50905581 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccgaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 50905680  T
Q  251 ctatcacctatgattataata 271  Q
    ||||||||||| |||||||||    
T  50905681 ctatcacctataattataata 50905701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 145 - 272
Target Start/End: Complemental strand, 8461938 - 8461812
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 244  Q
    ||||||||||| ||||||| |||| ||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  8461938 ttttatggcaacttctatggtacatccaaccatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaat 8461839  T
Q  245 tattttctatcacctatgattataataa 272  Q
    || |||||||||||||| ||||||||||    
T  8461838 ta-tttctatcacctataattataataa 8461812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 151 - 268
Target Start/End: Original strand, 27295058 - 27295175
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  27295058 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 27295157  T
Q  251 ctatcacctatgattata 268  Q
    ||||||||||| ||||||    
T  27295158 ctatcacctataattata 27295175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 31931104 - 31930983
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||| ||||  |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||  ||||||    
T  31931104 ggcaaattctatggtacatccaacaatttgagtgtattggtacatcaaatccttaaattaatagttaaatgagttattttttgtaggaaaaatatatttt 31931005  T
Q  251 ctatcacctatgattataataa 272  Q
    |||||| |||| ||||||||||    
T  31931004 ctatcatctataattataataa 31930983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 45423609 - 45423730
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||| ||||  |||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  45423609 ggcaagttctatggtacatccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 45423708  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  45423709 ctatcacctataattataataa 45423730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 149 - 272
Target Start/End: Original strand, 37498742 - 37498864
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 248  Q
    ||||||||||||||| |||| ||||  ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||    
T  37498742 atggcaaattctatggtacatccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaataagttattttttgtaagaaaaaa-tatt 37498840  T
Q  249 ttctatcacctatgattataataa 272  Q
    ||||||||||||| ||||||||||    
T  37498841 ttctatcacctataattataataa 37498864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 157 - 272
Target Start/End: Complemental strand, 23459958 - 23459841
Alignment:
Q  157 ttctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaata--agttattttttgtaggaaaaaattattttctat 254  Q
    |||||||||||||||||  ||||||||||||||||| |||||| ||||||||| ||||||||| |  |||||||||||||||||||||||||||||||||    
T  23459958 ttctatgatacacccaacaatttgagtgtattggtatatcaaacccttaaattaatagttaaaaatgagttattttttgtaggaaaaaattattttctat 23459859  T
Q  255 cacctatgattataataa 272  Q
    ||||||| ||||||||||    
T  23459858 cacctataattataataa 23459841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 154 - 272
Target Start/End: Complemental strand, 26102876 - 26102758
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 253  Q
    |||||||||| ||||| |||| |||| ||||||||| |||| |||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  26102876 aaattctatggtacactcaataatttaagtgtattgatacaccaaatccttaaattaatagttaaatgagttattttttgaaggaaaaaattattttcta 26102777  T
Q  254 tcacctatgattataataa 272  Q
    ||| |||||||||||||||    
T  26102776 tcaactatgattataataa 26102758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 39190964 - 39190842
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||| ||||||| |||| ||||  ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||| |||||||    
T  39190964 tggcaagttctatggtacatccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaatattattt 39190865  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  39190864 tctatcacctataattataataa 39190842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 39971676 - 39971554
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||| ||||||| |||  ||||| ||||||||||||||||| | ||||| |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  39971676 tggcaagttctatggtacgtccaataatttgagtgtattggtataccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaattattt 39971577  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  39971576 tctatcacctataattataataa 39971554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 922248 - 922127
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  922248 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 922149  T
Q  251 ctatcacctatgattataataa 272  Q
      ||||||||| |||| |||||    
T  922148 tcatcacctataattagaataa 922127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 35305151 - 35305272
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  35305151 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaataagttattttttgtaggaaaaaaatatttt 35305250  T
Q  251 ctatcacctatgattataataa 272  Q
      ||||||||| |||| |||||    
T  35305251 tcatcacctataattagaataa 35305272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 41073270 - 41073390
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||||||  |||||||||||||||||||  ||||||||||||| |||||||||| | ||||||||||||||||||||||| |||    
T  41073270 ggcaaattctatggtacacccaaccatttgagtgtattggtacacaaaatccttaaattaatagttaaatgaattattttttgtaggaaaaaatta-ttt 41073368  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  41073369 ctatcacctataattataataa 41073390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 147 - 272
Target Start/End: Complemental strand, 5956937 - 5956812
Alignment:
Q  147 ttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 246  Q
    |||||||||||| |||| |||||||||  |||| |||||||||||||| | |||  ||||||| |||||||||| |||||||||||||||||||||| ||    
T  5956937 ttatggcaaattatatggtacacccaacaatttaagtgtattggtacaccgaatttttaaattaatagttaaatgagttattttttgtaggaaaaaaata 5956838  T
Q  247 ttttctatcacctatgattataataa 272  Q
    ||||||||||||||| ||||||||||    
T  5956837 ttttctatcacctataattataataa 5956812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 38262540 - 38262419
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||||  ||  ||||||||||||||||||| ||||| |||||||| || ||||||| |||||||||||||||||||||||||||||    
T  38262540 ggcaagttctatggtacacttaacaatttgagtgtattggtacaccaaattcttaaattaattgttaaatgagttattttttgtaggaaaaaattatttt 38262441  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  38262440 ctatcacctataattataataa 38262419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 46771138 - 46771017
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||||| ||  ||||||||||||||||| | |||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  46771138 ggcaagttctatggtacacctaacaatttgagtgtattggtataccaaatccttaaattaatagttaaatgagttattttttgtgggaaaaaattatttt 46771039  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||| | ||||||||||    
T  46771038 ctatcacctgtaattataataa 46771017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 157 - 272
Target Start/End: Original strand, 51519788 - 51519901
Alignment:
Q  157 ttctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatca 256  Q
    ||||||| |||||||||  ||||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||||  |||||||||||||||||    
T  51519788 ttctatggtacacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtagg--aaaattattttctatca 51519885  T
Q  257 cctatgattataataa 272  Q
    ||||| ||||||||||    
T  51519886 cctataattataataa 51519901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 147 - 272
Target Start/End: Original strand, 2247063 - 2247188
Alignment:
Q  147 ttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 246  Q
    ||||| ||||||||||| |||||| || |||||||||||||||||||| |||||| ||||||| ||||||||||  | ||||||||| ||  ||||||||    
T  2247063 ttatgacaaattctatggtacacctaaagatttgagtgtattggtacaccaaatcattaaattaatagttaaatgtgctattttttgaagagaaaaatta 2247162  T
Q  247 ttttctatcacctatgattataataa 272  Q
    ||||||||||||||| ||||||||||    
T  2247163 ttttctatcacctataattataataa 2247188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 153 - 272
Target Start/End: Complemental strand, 11779040 - 11778921
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    |||||| |||| ||||||||| |||||||||||||||||||| |||||| ||||||| ||||||||||   |||||||||| ||  ||||||||||||||    
T  11779040 caaattatatggtacacccaaagatttgagtgtattggtacaacaaatcattaaattaatagttaaatgttttattttttgaagagaaaaattattttct 11778941  T
Q  253 atcacctatgattataataa 272  Q
    ||||||||| ||||||||||    
T  11778940 atcacctataattataataa 11778921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 29106748 - 29106649
Alignment:
Q  176 atttgagtgtattg---gtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||||||||||   ||||| |||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29106748 atttgagtgtattgctggtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaattattttctatcacctataattataataa 29106649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 18641885 - 18641984
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||||||| ||||||| ||||| |||  |||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  18641885 tatggcaagttctatggtacactcaacaatttgagtgtattggtacactaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattat 18641984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 51184044 - 51184153
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtagga-aaaaattattttc 251  Q
    ||||||||||| ||||||||| |||||||||||||||||||| |||||| ||||||| ||||||||||   |||||||||  | || |||||||||||||    
T  51184044 caaattctatggtacacccaaagatttgagtgtattggtacaacaaatcattaaattaatagttaaatgttttatttttttaaagagaaaaattattttc 51184143  T
Q  252 tatcacctat 261  Q
    ||||||||||    
T  51184144 tatcacctat 51184153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 272
Target Start/End: Complemental strand, 633060 - 632933
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 244  Q
    ||||||||||||||||||| ||||| |||  ||||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||    
T  633060 ttttatggcaaattctatggtacactcaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaat 632961  T
Q  245 tattttctatcacctatgattataataa 272  Q
    | ||||| ||||||||| ||||||||||    
T  632960 tgttttccatcacctataattataataa 632933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 272
Target Start/End: Original strand, 23304401 - 23304528
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 244  Q
    ||||| |||||| |||||| ||||||||| |||  |||||||||||||||  ||||| ||||||| ||||||||||  ||||||||||  ||  ||||||    
T  23304401 ttttaaggcaaaatctatggtacacccaaagatacgagtgtattggtacacaaaatcattaaattaatagttaaatgtgttatttttttaagagaaaaat 23304500  T
Q  245 tattttctatcacctatgattataataa 272  Q
    | ||||||||||||||| ||||||||||    
T  23304501 tgttttctatcacctataattataataa 23304528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 50239612 - 50239519
Alignment:
Q  179 tgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||||||||||||  ||||| ||||||| ||||||||||  ||||||||||| ||  ||||||||||||||||||||||| ||||||||||    
T  50239612 tgagtgtattggtacactaaatcattaaattaatagttaaatgtgttattttttgaagagaaaaattattttctatcacctataattataataa 50239519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 7121954 - 7122077
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||||||||||||||| || ||| || |||||||||||||||||||| |||||| ||||||| ||||||||||   || |||||||  |  ||||||||     
T  7121954 tatggcaaattctatggtatacctaaagatttgagtgtattggtacaacaaatcattaaattaatagttaaatgttttgttttttgacgagaaaaatta- 7122052  T
Q  248 tttctatcacctatgattataataa 272  Q
    |||||||||||||| ||||||||||    
T  7122053 tttctatcacctataattataataa 7122077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 44246372 - 44246305
Alignment:
Q  183 tgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  44246372 tgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 44246305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 35874345 - 35874223
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||   | || ||||||| ||||||||||||||| ||||||| || |||| |||||||    
T  35874345 ggcaaattctatggtacacccaatatatttgagtgtattggtacactcactctttaaattaatagttaaataagttgttttttgaagaaaaatattattt 35874246  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||  ||| ||||||||||    
T  35874245 tttatcatttataattataataa 35874223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 272
Target Start/End: Original strand, 45673333 - 45673436
Alignment:
Q  157 ttctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatca 256  Q
    ||||||| |||||||||  |||||||||||||| ||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  45673333 ttctatggtacacccaacaatttgagtgtattgatacatcaaatccttaaatg------------agttattttttgtaggaaaaaattattttctatca 45673420  T
Q  257 cctatgattataataa 272  Q
    ||||| ||||||||||    
T  45673421 cctataattataataa 45673436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 48616856 - 48616733
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||||||||||||||| ||||| |||  ||||||||||||||||||| | ||||  |||||| ||||||||||  |||| |||||| ||  ||||||| |    
T  48616856 tatggcaaattctatggtacactcaaaaatttgagtgtattggtacacccaatcaataaattaatagttaaatgtgtta-tttttgaagagaaaaattgt 48616758  T
Q  248 tttctatcacctatgattataataa 272  Q
    |||| ||||||||| ||||||||||    
T  48616757 tttccatcacctataattataataa 48616733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 17525462 - 17525556
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 270  Q
    |||||||||||  ||||||||||| ||||||||| |||||||||| |||||||||||| || |||| |||||||| |||||  ||| ||||||||    
T  17525462 atttgagtgtaccggtacatcaaacccttaaatttatagttaaatgagttattttttgaagaaaaatattattttttatcatttataattataat 17525556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 43306582 - 43306644
Alignment:
Q  204 taaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgatta 266  Q
    |||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  43306582 taaattaatagttaaatgagttattttttgtaggaataaattattttctatcacctataatta 43306644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 268
Target Start/End: Complemental strand, 6520366 - 6520274
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagtta-ttttttgtaggaaaaaattattttctatcacctatgattata 268  Q
    ||||||||||||||||||||| |||  ||||||| |||||||||| | ||| |||||| |||||||||| ||||||||||||||||| ||||||    
T  6520366 atttgagtgtattggtacatcgaatttttaaattaatagttaaatgaattatttttttataggaaaaaa-tattttctatcacctataattata 6520274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 23056768 - 23056857
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaa 243  Q
    ||||| |||| |||| ||||| |||| |||||||||||||| | |||  ||||||| |||||||||| ||||||||||||||||||||||    
T  23056768 aaattatatggtacatccaataatttaagtgtattggtacaccgaatttttaaattaatagttaaatgagttattttttgtaggaaaaaa 23056857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 272
Target Start/End: Original strand, 52260817 - 52260934
Alignment:
Q  155 aattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctat 254  Q
    |||| |||| ||||| ||| || |||| |||||||||||| ||||||  |||||| ||||||||||  ||||| ||||| ||  ||||||| ||||||||    
T  52260817 aattatatggtacactcaaagaattgaatgtattggtacaccaaatcaataaattaatagttaaatgtgttatcttttgaagataaaaattgttttctat 52260916  T
Q  255 cacctatgattataataa 272  Q
    ||||||| ||||||||||    
T  52260917 cacctataattataataa 52260934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 272
Target Start/End: Complemental strand, 26011346 - 26011227
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    |||||| |||| |||||||||  |||||||||||||| |||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| |||||     
T  26011346 caaattttatggtacacccaaaaatttgagtgtattgatacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgttttcc 26011247  T
Q  253 atcacctatgattataataa 272  Q
    ||||||||| ||||||||||    
T  26011246 atcacctataattataataa 26011227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 35910188 - 35910283
Alignment:
Q  177 tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||| ||||||||||||| ||| ||  |||||| ||||||||||  ||||||||||| ||  ||||||| ||||||||||||||| ||||||||||    
T  35910188 tttgggtgtattggtacaccaagtcaataaattaatagttaaatgtgttattttttgaagagaaaaattgttttctatcacctataattataataa 35910283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 266
Target Start/End: Complemental strand, 42317231 - 42317116
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||| |||| ||||| |||   |||||||||||||||||||||||||  |||||| ||||||||||  ||||||||||| |  ||||  |||||||    
T  42317231 ggcaaattatatggtacactcaaaattttgagtgtattggtacatcaaatcaataaattaatagttaaatgtgttattttttgaaaaaaaatgttatttt 42317132  T
Q  251 ctatcacctatgatta 266  Q
    |||||| |||| ||||    
T  42317131 ctatcatctataatta 42317116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 272
Target Start/End: Original strand, 27352850 - 27352968
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 253  Q
    |||||||||| |||| |||| ||||||||||||||| ||||  ||||  || |||| ||||||||||  |||| |||||| ||  |||||||||||| ||    
T  27352850 aaattctatggtacatccaaagatttgagtgtattgatacacaaaattattgaattaatagttaaatgtgttagtttttgaagagaaaaattattttata 27352949  T
Q  254 tcacctatgattataataa 272  Q
    |||||||| ||| ||||||    
T  27352950 tcacctataattgtaataa 27352968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 51056197 - 51056318
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| |||||| |||  |||||||||||  |||||| ||  || ||||||| ||||||||||||||||||||||| || |||| |||||||    
T  51056197 ggcaaattctatggtacacctaatatatttgagtgtaccggtacaccac-tctttaaattaatagttaaataagttattttttgaagaaaaatattattt 51056295  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||  ||| ||||||||||    
T  51056296 tttatcatttataattataataa 51056318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 9166873 - 9166994
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||| |||  |||||||||  ||||||||||||||||||| ||||||  |||||| ||||||||||  ||||||||||| |   ||||||| ||||    
T  9166873 ggcaaattatatagtacacccaaaaatttgagtgtattggtacaccaaatcaataaattaatagttaaatgtgttattttttgaatagaaaaattgtttt 9166972  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||  ||||  ||||||||||    
T  9166973 ctattgcctagaattataataa 9166994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 32145048 - 32144975
Alignment:
Q  177 tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||  ||||||||||||||||||||| |||||||||| |||||||||||| || || | ||||||||    
T  32145048 tttgagtgtaccggtacatcaaatccttaaatttatagttaaatgagttattttttgaagaaatatattatttt 32144975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 47719378 - 47719258
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||||||  |||||  |||  |||| ||||||||||||||||||||| ||||||| |||| | |||  ||||||||||| ||  |||| |||||||    
T  47719378 ggcaaattctacaatacattcaaaaatttaagtgtattggtacatcaaatcattaaattaataggt-aatgtgttattttttgaagagaaaatttatttt 47719280  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||| ||||||    
T  47719279 ctatcacctataattgtaataa 47719258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 477841 - 477735
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| ||||||||||  |||||||||||| ||||||   | || ||||||| || ||||||| |||| ||||||| || |||| |||||||    
T  477841 ggcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgagttgttttttgaagaaaaatattattt 477742  T
Q  250 tctatca 256  Q
    |||||||    
T  477741 tctatca 477735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 38260802 - 38260924
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| |||| | |||  |||||||||||  |||||| | | || ||||||| ||||||||||||||| ||||||| || |||| |||||||    
T  38260802 ggcaaattctatggtacatctaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttgttttttgaagaaaaatattattt 38260901  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||  ||| ||||||||||    
T  38260902 tttatcatttataattataataa 38260924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 28791774 - 28791653
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||| || | ||||| |||  ||||| ||||||||||||| ||| ||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  28791774 ggcaaattttacggtacactcaaaaatttgggtgtattggtacaccaagtcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 28791675  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||  ||||||||||    
T  28791674 ctatcacctacaattataataa 28791653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 6526836 - 6526712
Alignment:
Q  150 tggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatt-at 247  Q
    |||||||||||||| ||||||||||  |||||||||||  | ||||   | |||||||||| |||||||||| |||| |||||||||| |||| |||  |    
T  6526836 tggcaaattctatggtacacccaatatatttgagtgtaccgatacactcactccttaaattaatagttaaatgagttgttttttgtagaaaaatattgtt 6526737  T
Q  248 tttctatcacctatgattataataa 272  Q
    ||| |||||| ||| ||||||||||    
T  6526736 tttttatcacttataattataataa 6526712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 31821963 - 31821867
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||||||||||| |||| ||  | || ||||||| |||||||||| |||||||||||| || |||| |||||||| |||||  ||| ||||||||||    
T  31821963 atttgagtgtatcggtatatttattctttaaattcatagttaaatgagttattttttgaagaaaaatattattttttatcatttataattataataa 31821867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 36275098 - 36275002
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||||||||||||  || | ||||||  ||||||  |||||||||  ||||||||||| |   ||||||||||||||||||||||| ||||||||||    
T  36275098 atttgagtgtattaatataccaaatcaataaattagtagttaaatgtgttattttttgaaaagaaaaattattttctatcacctataattataataa 36275002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 2620680 - 2620767
Alignment:
Q  185 tattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||||||  |||||  |||||| ||||||||||  ||||||||||| ||  ||||||| |||| |||||||||| ||||||||||    
T  2620680 tattggtacactaaatcaataaattaatagttaaatgtgttattttttgaagagaaaaattgttttatatcacctataattataataa 2620767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 24381316 - 24381439
Alignment:
Q  151 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtta-ttttttgtaggaaaaaattatt 248  Q
    ||||||||||||| |||||| ||| ||||||||||||  ||||||   | || ||||||| |||||||||| ||||| ||||||| || |||| ||| ||    
T  24381316 ggcaaattctatggtacacctaatagatttgagtgtaccggtacactcactctttaaattaatagttaaatgagttatttttttgaagaaaaatattgtt 24381415  T
Q  249 ttctatcacctatgattataataa 272  Q
    || |||||| ||| ||||||||||    
T  24381416 ttttatcacttataattataataa 24381439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 34256453 - 34256532
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttt 230  Q
    ||||||||||||| |||||||||  |||||||||||| |||||| |||||  ||||||| ||| |||||  |||||||||    
T  34256453 ggcaaattctatggtacacccaacaatttgagtgtatcggtacaccaaattattaaattaataattaaacgagttatttt 34256532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 51369327 - 51369386
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaat 208  Q
    ||||||||||||||| ||||| |||  |||||||||||||| |||| |||||||||||||    
T  51369327 atggcaaattctatggtacactcaacaatttgagtgtattgatacaccaaatccttaaat 51369386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 48977286 - 48977200
Alignment:
Q  148 tatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttg 233  Q
    |||||||||||||||| ||||| ||||  |||||||||||  |||||| | | || ||||||| ||||||||||||||| |||||||    
T  48977286 tatggcaaattctatggtacactcaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttgttttttg 48977200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 42647450 - 42647503
Alignment:
Q  203 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatca 256  Q
    ||||||| |||||| ||||||||||||||| ||| |||||| ||||||||||||    
T  42647450 ttaaattaatagtttaataagttattttttttagaaaaaaaatattttctatca 42647503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 45809494 - 45809563
Alignment:
Q  201 ccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 270  Q
    ||||||||| |||||||||| |||||||||||| || |||| |||||||| |||||  ||| ||||||||    
T  45809494 ccttaaatttatagttaaatgagttattttttgaagaaaaatattattttttatcatttataattataat 45809563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 51787876 - 51787775
Alignment:
Q  150 tggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 248  Q
    |||||||||||||| |||| |||||  |||||||||||  |||||| | | || ||||||| |||||||||| |||| ||||||| || |||| ||||||    
T  51787876 tggcaaattctatggtacatccaatatatttgagtgtaccggtacacccattctttaaattaatagttaaatgagttgttttttgaagaaaaatattatt 51787777  T
Q  249 tt 250  Q
    ||    
T  51787776 tt 51787775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 52180287 - 52180356
Alignment:
Q  203 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||| ||||||||||||||| ||||||| || |||| |||||||| |||||  ||| ||||||||||    
T  52180287 ttaaattaatagttaaataagttgttttttgaagaaaaatattattttttatcatttataattataataa 52180356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 31076018 - 31075894
Alignment:
Q  150 tggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatt-ttttgtaggaaaaaattat 247  Q
    |||||||||||||| ||||||||||  |||||||||||  |||||| | | || ||||||| ||| |||||| ||||||| ||||| || |||| |||||    
T  31076018 tggcaaattctatggtacacccaatatatttgagtgtaccggtacacccattcattaaattaataattaaatgagttatttttttgaagaaaaatattat 31075919  T
Q  248 tttctatcacctatgattataataa 272  Q
    ||| ||| |  ||| ||||||||||    
T  31075918 tttttattatttataattataataa 31075894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 33906344 - 33906440
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||||||| ||||||||||   ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||| ||||||||| ||||||||||    
T  33906344 atttgagtatattggtacactcaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgttttccatcacctataattataataa 33906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 49854107 - 49854226
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt-attttttgtaggaaaaaattattttc 251  Q
    ||||||||||| ||  |||||||||| |||||||   | |||  |||||||| |||| || |||||||||||| ||||||| || |||||||||||||||    
T  49854107 caaattctatggtatgcccaatgattcgagtgtaccagcacacaaaatcctttaattaattgttaaataagttgatttttttta-gaaaaaattattttc 49854205  T
Q  252 tatcacctatgattataataa 272  Q
    ||| |  ||| ||||||||||    
T  49854206 tattatttataattataataa 49854226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 45622838 - 45622791
Alignment:
Q  203 ttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||| ||||||||||||||||||||||| || |||| ||||||||    
T  45622838 ttaaattcatagttaaataagttattttttgaagaaaaatattatttt 45622791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 46281939 - 46282048
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aatt 245  Q
    |||||||||||||||| ||||||||||  ||||||||||  |||||| |||| | ||||| | ||| ||||||   || ||||||| |||||||  ||||    
T  46281939 tatggcaaattctatggtacacccaatattttgagtgtaccggtacaccaaa-cattaaaataataattaaattgattgttttttgaaggaaaaataatt 46282037  T
Q  246 attttctatca 256  Q
    |||||||||||    
T  46282038 attttctatca 46282048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 254
Target Start/End: Original strand, 46872369 - 46872474
Alignment:
Q  151 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattat 247  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||| ||| || | ||||| |||  ||||| |||||||||||  | |||||  ||||||    
T  46872369 ggcaaattctatgatacacccaataaatttgggtgtattggtacaccaagtcgtaaaattaata-ataaatgagttatttttttgaagaaaaataattat 46872467  T
Q  248 tttctat 254  Q
    |||||||    
T  46872468 tttctat 46872474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 17554224 - 17554118
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| ||||||||||  |||||||||||  ||||||   | || ||||||| || ||||||| |||| ||||||  || |||| |||||||    
T  17554224 ggcaaattctatggtacacccaatatatttgagtgtaccggtacactcactctttaaattaatggttaaatgagttgttttttaaagaaaaatattattt 17554125  T
Q  250 tctatca 256  Q
    |||||||    
T  17554124 tctatca 17554118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 30263987 - 30263889
Alignment:
Q  153 caaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||| ||||||||||  |||||||||||    |||| ||| || ||||||| |||||||||| |||| ||||||| || |||| ||||||||    
T  30263987 caaattctatggtacacccaatatatttgagtgtacccatacaccaattctttaaattaatagttaaatgagttgttttttgaagaaaaatattatttt 30263889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 44978868 - 44978950
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 232  Q
    |||||||||||||| |||||||||  |||||||||||  |||||| |||||  ||||||| ||| |||||  |||| ||||||    
T  44978868 tggcaaattctatggtacacccaacaatttgagtgtaccggtacaccaaattattaaattaataattaaacgagttttttttt 44978950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 51369388 - 51369438
Alignment:
Q  222 agttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||||||||||||||||||  |||||||||||  ||| ||||||||||    
T  51369388 agttattttttgtaggaaaaaaacattttctatcatttataattataataa 51369438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 9260223 - 9260116
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattat 247  Q
    ||||||||||||| ||||||||||| |||||  ||||| |||||||||| || | ||||| |||  ||||| |||||||||||  | |||||  ||||||    
T  9260223 ggcaaattctatggtacacccaatgaatttggatgtatcggtacatcaagtcgtaaaattaata-ataaatgagttatttttttgaagaaaaataattat 9260125  T
Q  248 tttctatca 256  Q
    |||||||||    
T  9260124 tttctatca 9260116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 10179219 - 10179158
Alignment:
Q  211 atagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||||||  ||||||||||| ||  ||||||| |||||||||| |||| ||||||||||    
T  10179219 atagttaaatgtgttattttttgaagagaaaaattgttttctatcatctataattataataa 10179158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 49616191 - 49616150
Alignment:
Q  192 acatcaaatccttaaattgatagttaaataagttattttttg 233  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    
T  49616191 acatcaaattcttaaattaatagttaaatgagttattttttg 49616150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 2665218 - 2665277
Alignment:
Q  190 gtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||| |||||||| ||||||||||| ||| ||| ||| | ||||||||||||||    
T  2665218 gtacatcaaatacttaaattaatagttaaatatgttgtttgttg-aagaaaaaattatttt 2665277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 12227119 - 12227229
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa---aatt 245  Q
    ||||||||||||||| |||||||||   ||||||||||   ||||| |||| | ||||||| ||| |||||| |||| ||||||  | |||||   ||||    
T  12227119 atggcaaattctatggtacacccaacattttgagtgtaccagtacaccaaagcattaaattaataattaaattagttgtttttttgaagaaaaaataatt 12227218  T
Q  246 attttctatca 256  Q
    |||||||||||    
T  12227219 attttctatca 12227229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 14077329 - 14077436
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattatt 248  Q
    ||||||||||| | |||| ||||   ||||||||||  |||||| |||| | ||||||| ||| |||||| |||| ||||||| || ||||  |||||||    
T  14077329 ggcaaattctacggtacatccaacattttgagtgtaccggtacaccaaagcattaaattaataattaaattagttgttttttgaagaaaaaataattatt 14077428  T
Q  249 ttctatca 256  Q
    ||||||||    
T  14077429 ttctatca 14077436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 21072776 - 21072857
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttg 233  Q
    |||||||| |||| ||||||||||  |||||| ||||| |||||  | | || ||||||| |||||||||||||||||||||||    
T  21072776 ggcaaattatatggtacacccaatacatttgactgtatcggtac--ccactctttaaattaatagttaaataagttattttttg 21072857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 41568445 - 41568551
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattatt 248  Q
    ||||||||||||| ||||||||||  ||||||||||  |||||| |||| | ||||| | ||| ||||||   || ||||||| |||||||  |||||||    
T  41568445 ggcaaattctatggtacacccaatattttgagtgtaccggtacaccaaa-cattaaaataataattaaattgattgttttttgaaggaaaaataattatt 41568543  T
Q  249 ttctatca 256  Q
    ||||||||    
T  41568544 ttctatca 41568551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 47601672 - 47601728
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 232  Q
    |||||||||||  |||||| |||||| ||||||| ||| ||||||||||| ||||||    
T  47601672 atttgagtgtaccggtacaccaaatcattaaattcataattaaataagttgtttttt 47601728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 50631996 - 50631916
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt-attttttg 233  Q
    |||||| ||| |||||||||| |||||||||||  |||||| |||| | ||||||| ||| |||||| |||| ||||||||    
T  50631996 aaattccatggtacacccaataatttgagtgtaccggtacaccaaagcgttaaattaataattaaatgagttgattttttg 50631916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 6e-49; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 3716324 - 3716446
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  3716324 tggcaaattctatggtacatccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattt 3716423  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||||||||||||||    
T  3716424 tctatcacctatgattataataa 3716446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 34280635 - 34280514
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34280635 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaataagttattttttgtaggaaaaaattatttt 34280536  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||| ||| ||||||||||    
T  34280535 ctatcacatataattataataa 34280514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 30539568 - 30539690
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||| ||||||| |||||||||  |||| |||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  30539568 tggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattt 30539667  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  30539668 tctatcacctataattataataa 30539690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 27538915 - 27539036
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  27538915 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaataattatttt 27539014  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  27539015 ctatcacctataattataataa 27539036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 157 - 269
Target Start/End: Original strand, 52589077 - 52589189
Alignment:
Q  157 ttctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatca 256  Q
    ||||||| |||| ||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  52589077 ttctatggtacatccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattttctatca 52589176  T
Q  257 cctatgattataa 269  Q
    ||||| |||||||    
T  52589177 cctataattataa 52589189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 145 - 272
Target Start/End: Original strand, 30342819 - 30342945
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 244  Q
    |||||||||||||| |||| |||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  30342819 ttttatggcaaattatatggtacacccaaccatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaat 30342918  T
Q  245 tattttctatcacctatgattataataa 272  Q
    || |||||||||||||| |||| |||||    
T  30342919 ta-tttctatcacctataattaaaataa 30342945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 41760068 - 41759945
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat-tatt 248  Q
    |||||||||||||| |||| ||||  ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||    
T  41760068 tggcaaattctatggtacatccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtagtaaaaaatatatt 41759969  T
Q  249 ttctatcacctatgattataataa 272  Q
    ||||||||||||| ||||||||||    
T  41759968 ttctatcacctataattataataa 41759945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 51436220 - 51436098
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaa-aaaattattt 249  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||| |||| |||||    
T  51436220 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaaatattt 51436121  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  51436120 tctatcacctataattataataa 51436098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 37855121 - 37855242
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||||||||||| ||| ||  |||||||||||| |||||| |||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  37855121 ggcaaattctatgatatacctaacaatttgagtgtataggtacaccaaatccttaaattaatagttaaatgagttattttttgtatgaaaaaaatatttt 37855220  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  37855221 ctatcacctataattataataa 37855242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 145 - 272
Target Start/End: Original strand, 28037679 - 28037807
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtag-gaaaaaa 243  Q
    ||||||||||||||||||| | |||||||  ||||||||||||||||||| |||||||||||||| |||||||||| ||||| |||||||||  ||||||    
T  28037679 ttttatggcaaattctatggtgcacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttactttttgtagaaaaaaaa 28037778  T
Q  244 ttattttctatcacctatgattataataa 272  Q
     ||||||||||||||||| ||||||||||    
T  28037779 atattttctatcacctataattataataa 28037807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 151 - 270
Target Start/End: Complemental strand, 48066411 - 48066292
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||| ||||| ||||||||||||||||| | |||||| ||||||| |||||| ||||| ||||||||||||| |||||||||||||    
T  48066411 ggcaaattctatggtacatccaatcatttgagtgtattggtataccaaatcattaaattaatagttcaataaattattttttgtagaaaaaaattatttt 48066312  T
Q  251 ctatcacctatgattataat 270  Q
    ||||||||||| ||||||||    
T  48066311 ctatcacctataattataat 48066292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 151 - 269
Target Start/End: Complemental strand, 43137771 - 43137653
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||||||||  |||| |||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||    
T  43137771 ggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 43137672  T
Q  251 ctatcacctatgattataa 269  Q
    | ||||||||| |||||||    
T  43137671 cgatcacctataattataa 43137653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 37519373 - 37519249
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||||||||||||||| || ||||||| |||||| |||||||||||| || | | ||||||| |||||| ||| | ||||||||||||||||||||||||    
T  37519373 tatggcaaattctatggtatacccaatcatttgaatgtattggtacaccataccattaaattaatagttcaatgaattattttttgtaggaaaaaattat 37519274  T
Q  248 tttctatcacctatgattataataa 272  Q
    |||||||||||||| ||||||||||    
T  37519273 tttctatcacctataattataataa 37519249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 37523589 - 37523465
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||||||||||||||| || ||||||| |||||| |||||||||||| || | | ||||||| |||||| ||| | ||||||||||||||||||||||||    
T  37523589 tatggcaaattctatggtatacccaatcatttgaatgtattggtacaccataccattaaattaatagttcaatgaattattttttgtaggaaaaaattat 37523490  T
Q  248 tttctatcacctatgattataataa 272  Q
    |||||||||||||| ||||||||||    
T  37523489 tttctatcacctataattataataa 37523465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 151 - 269
Target Start/End: Original strand, 55722476 - 55722594
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||||||||||||| | ||  |||||| ||||||||||||  ||||||||||||| |||||||| | |||||||||||||||||||||| ||||||    
T  55722476 ggcaaattctatgatacatctaacaatttgaatgtattggtacactaaatccttaaattaatagttaattgagttattttttgtaggaaaaaaatatttt 55722575  T
Q  251 ctatcacctatgattataa 269  Q
    ||||||||||| |||||||    
T  55722576 ctatcacctataattataa 55722594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 14802712 - 14802833
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| ||||| |||  |||||||||||||| |||| |||||||||||||| |||||||||| ||||||||||||||| |||||| ||||||    
T  14802712 ggcaaattctatggtacactcaacaatttgagtgtattgatacaccaaatccttaaattaatagttaaatgagttattttttgtagaaaaaaaatatttt 14802811  T
Q  251 ctatcacctatgattataataa 272  Q
      ||||||||| ||||||||||    
T  14802812 tcatcacctataattataataa 14802833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 31908443 - 31908564
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| |||||| ||||||| ||||||||||  || |||||||| ||  ||||||| ||||    
T  31908443 ggcaaattctatgatacacccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaatgtgtgattttttgaagagaaaaattgtttt 31908542  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  31908543 ctatcacctataattataataa 31908564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 38835849 - 38835971
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||| ||||||||||| |||||| ||| ||||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||||||||||||     
T  38835849 tatgacaaattctatggtacacctaataatttgagtgtattggtacatcaaattcttaaattaatagttaaatgagtt-ttttttgtaggaaaaaatta- 38835946  T
Q  248 tttctatcacctatgattataataa 272  Q
    ||||||| | |||| ||||||||||    
T  38835947 tttctatgatctataattataataa 38835971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 46041726 - 46041822
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||||||||||||| |||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  46041726 atttgagtgtattgatacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaattattttatatcacctataattataataa 46041822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 48579316 - 48579195
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||| |||| |||| ||||  |||||| |||||||||||| |||||||||||||| |||||||||| ||||||||||| ||||| |||| |||||    
T  48579316 tggcaaattatatggtacatccaacaatttgaatgtattggtacaccaaatccttaaattaatagttaaatgagttatttttt-taggagaaaaatattt 48579218  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  48579217 tctatcacctataattataataa 48579195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 261
Target Start/End: Original strand, 47302029 - 47302141
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattg--atagttaaataagttattttttgtaggaaaaaattatt 248  Q
    |||||||| |||| | |||| ||  ||||||||||||||||||||||||||||||||||   |||||||||| ||||| |||||||||||||||||||||    
T  47302029 ggcaaattttatggtgcacctaacaatttgagtgtattggtacatcaaatccttaaattataatagttaaatgagttactttttgtaggaaaaaattatt 47302128  T
Q  249 ttctatcacctat 261  Q
    |||||||||||||    
T  47302129 ttctatcacctat 47302141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 9858244 - 9858365
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||  ||||||||| ||| ||||||||||| |||| |||||| ||||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  9858244 ggcaaattctatagtacacccaaagatatgagtgtattgatacaccaaatcattaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 9858343  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  9858344 ctatcacctataattataataa 9858365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 29646624 - 29646745
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||| | ||   |||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||||| || ||||| |||||||    
T  29646624 ggcaaattctatggtacatcaaaaattttgagtgtattggtacaccaaatcaataaattaatagttaaatatgttattttttgaagaaaaaagttatttt 29646723  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  29646724 ctatcacctataattataataa 29646745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 38975277 - 38975397
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt-gtaggaaaaaattattt 249  Q
    ||||||||||||| |||||||||  | ||||||||||| |||||  ||||| ||||||| |||||||||| ||||||||||| | || ||||||||||||    
T  38975277 ggcaaattctatggtacacccaa--aattgagtgtattagtacacaaaatctttaaattaatagttaaatgagttatttttttgaagaaaaaaattattt 38975374  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  38975375 tctatcacctataattataataa 38975397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 53389253 - 53389131
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaa-aaaattattt 249  Q
    ||||||||||||| |||| | ||  |||||||||||| ||||||  ||||| ||||||| |||||||||| |||||||||||||||||| |||| |||||    
T  53389253 ggcaaattctatggtacatcaaacaatttgagtgtatcggtacactaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaaaatattt 53389154  T
Q  250 tctatcacctatgattataataa 272  Q
    ||||||| |||| ||||||||||    
T  53389153 tctatcatctataattataataa 53389131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 52809350 - 52809230
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||| ||||| |||| ||||  ||||||||||||||||||| | |||  ||||||| |||||||||| ||||||||||| |||||||||| ||||||    
T  52809350 ggcaaatactatggtacatccaacaatttgagtgtattggtacaccgaatttttaaattaatagttaaatgagttattttttataggaaaaaa-tatttt 52809252  T
Q  251 ctatcacctatgattataataa 272  Q
    | ||||||||| ||||||||||    
T  52809251 caatcacctataattataataa 52809230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 36091059 - 36091179
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||| |||| |||| |||| ||| |||||||||||||||| |||||| ||||||| ||||||||||  ||||||||||| | || |||| | ||||    
T  36091059 ggcaaattatatggtacatccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaatgtgttattttttg-aagagaaaactgtttt 36091157  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  36091158 ctatcacctataattataataa 36091179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 272
Target Start/End: Complemental strand, 36592437 - 36592319
Alignment:
Q  155 aattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt-cta 253  Q
    |||| |||| |||||||||  |||||||||||||| |||| |||||||||||||| |||||||||| |||||||||||| |  ||||||| ||||| | |    
T  36592437 aattttatggtacacccaaaaatttgagtgtattgttacaccaaatccttaaattaatagttaaatgagttattttttgaaaaaaaaaatcattttacaa 36592338  T
Q  254 tcacctatgattataataa 272  Q
    ||| |||| ||||||||||    
T  36592337 tcatctataattataataa 36592319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 56361717 - 56361598
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||  ||  ||||||||||||||||||| ||||||  |||||| ||||||||||  ||||||||||| ||  ||||| ||||||    
T  56361717 ggcaaattctatgttacacaaaa--atttgagtgtattggtacaccaaatcaataaattaatagttaaatgtgttattttttgaagagaaaaaatatttt 56361620  T
Q  251 ctatcacctatgattataataa 272  Q
     |||||||||| ||||||||||    
T  56361619 atatcacctataattataataa 56361598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 33076323 - 33076266
Alignment:
Q  215 ttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33076323 ttaaatgagttattttttgtaggaaaaaattattttctatcacctataattataataa 33076266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 272
Target Start/End: Complemental strand, 39162207 - 39162090
Alignment:
Q  155 aattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctat 254  Q
    ||||||||| ||||| |||  ||||| ||||||||||||| ||| ||  |||||| ||||||||||  ||||||||||| ||  ||||||| ||||||||    
T  39162207 aattctatggtacactcaaaaatttgggtgtattggtacaccaagtcaataaattaatagttaaatgtgttattttttgaagagaaaaattgttttctat 39162108  T
Q  255 cacctatgattataataa 272  Q
    ||||||| ||||||||||    
T  39162107 cacctataattataataa 39162090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 46216178 - 46216057
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||  |||||||||  ||||||||||||||||||| | ||||   ||||| ||| ||||||  ||||||||||| ||  ||||||| ||||    
T  46216178 ggcaaattctattgtacacccaaaaatttgagtgtattggtacacccaatcaacaaattaataattaaatgtgttattttttgaagagaaaaattgtttt 46216079  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  46216078 ctatcacctataattataataa 46216057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 1414505 - 1414387
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||| ||||  ||||| || |||||||||||||||||||| |||||| ||||||| ||||||||||    | ||||||  ||  ||||||||||||    
T  1414505 ggcaaattttatggcacacctaaagatttgagtgtattggtacaccaaatcattaaattaatagttaaat---gtgtttttttaagagaaaaattatttt 1414409  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  1414408 ctatcacctataattataataa 1414387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 18425525 - 18425454
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaata 221  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||| |||||| ||||||| |||||||||||    
T  18425525 tggcaaattctatggtacacccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaata 18425454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 272
Target Start/End: Original strand, 47302399 - 47302517
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 253  Q
    ||||| |||| ||||| |||  ||||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||| |    
T  47302399 aaattttatggtacactcaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgttttcca 47302498  T
Q  254 tcacctatgattataataa 272  Q
    |||||||| ||||||||||    
T  47302499 tcacctataattataataa 47302517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 266
Target Start/End: Complemental strand, 9356789 - 9356673
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| ||||||||||  |||| |||||||||||| ||  | || ||||||| |||||||||| |||| ||||||| || |||| |||||||    
T  9356789 ggcaaattctatggtacacccaatatattttagtgtattggtaaattcagtctttaaattaatagttaaatgagttgttttttgaagaaaaatattattt 9356690  T
Q  250 tctatcacctatgatta 266  Q
    | ||||| |||| ||||    
T  9356689 tttatcatctataatta 9356673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 53695778 - 53695682
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||||| |||||||||||||||||||   ||||| ||||| ||||  ||||||||||| ||  ||||||| ||||| ||||||||| ||||||||||    
T  53695778 atttgaatgtattggtacatcaaatcaaaaaattaatagtcaaatgtgttattttttgaagagaaaaattgttttccatcacctataattataataa 53695682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 53936922 - 53936819
Alignment:
Q  148 tatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 246  Q
    |||||||||||||||| ||||||||||  |||||||||||  |||||| | | || ||||||| |||||||||| |||| ||||||| || |||| ||||    
T  53936922 tatggcaaattctatggtacacccaatatatttgagtgtaccggtacacccattctttaaattaatagttaaatgagttgttttttgaagaaaaatatta 53936823  T
Q  247 tttt 250  Q
    ||||    
T  53936822 tttt 53936819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 352879 - 352757
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| |||| |||||  |||| ||||||  |||||| | | || ||||||| ||||||||||||||| ||||||| || |||| |||||||    
T  352879 ggcaaattctatggtacatccaatatatttaagtgtaccggtacacctactctttaaattaatagttaaataagttcttttttgaagaaaaatattattt 352780  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||  ||| ||||||||||    
T  352779 tttatcatttataattataataa 352757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 33491568 - 33491446
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| |||| |||||  |||||||||||  |||||| |   || ||||||| ||||||||||||||| ||||||| || |||| |||||||    
T  33491568 ggcaaattctatggtacatccaatatatttgagtgtaccggtacacccgctctttaaattaatagttaaataagttgttttttgaagaaaaatattattt 33491469  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||  ||| ||||||||||    
T  33491468 tttatcatttataattataataa 33491446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 43363327 - 43363449
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||| |||| |||||| |||  ||||||||||||||||| ||    || ||||||| |||||||||| |||| ||||||| || |||| |||||||    
T  43363327 ggcaaattttatggtacacctaatatatttgagtgtattggtatattcgctctttaaattaatagttaaatgagttgttttttgaagaaaaatattattt 43363426  T
Q  250 tctatcacctatgattataataa 272  Q
    | ||||| |||| ||||||||||    
T  43363427 tttatcatctataattataataa 43363449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 423147 - 423272
Alignment:
Q  148 tatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 246  Q
    ||||| |||||||||  |||| |||||  |||||||||||| |||||| | | || |||||||  |||||||||||||| ||||||| || |||| ||||    
T  423147 tatggtaaattctatcgtacatccaatatatttgagtgtatcggtacacccattctttaaattagtagttaaataagttgttttttgaagaaaaatatta 423246  T
Q  247 ttttctatcacctatgattataataa 272  Q
    |||| |||||  ||| ||||||||||    
T  423247 ttttttatcatttataattataataa 423272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 46004733 - 46004609
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||||| ||||||||| |||| ||||  ||||||||||||||||||| |||||   || ||| || || ||||  ||||||||||| ||  ||||||| |    
T  46004733 tatggcgaattctatggtacatccaaaaatttgagtgtattggtacaccaaattaatatattaatcgtaaaatgtgttattttttgaagagaaaaattgt 46004634  T
Q  248 tttctatcacctatgattataataa 272  Q
    || ||||||||||  ||||||||||    
T  46004633 ttactatcacctacaattataataa 46004609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 30891496 - 30891453
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggta 192  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  30891496 atggcaaattctatggtacacccaaagatttgagtgtattggta 30891453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 34828722 - 34828844
Alignment:
Q  151 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||||||||||||||  ||||||||| |  |||| | | | || ||||||| | |||||||| |||| ||||||| || |||| |||||||    
T  34828722 ggcaaattctatgatacacccaatatatttgagtgcaccggtatacccattctttaaattaacagttaaatgagttgttttttgaagaaaaatattattt 34828821  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||  ||| ||||||||||    
T  34828822 tttatcatttataattataataa 34828844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 270
Target Start/End: Complemental strand, 42881409 - 42881315
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 270  Q
    |||||||||||  |||||| ||||  || ||||| |||||||||| |||||||||||| || |||| |||||||| |||||  ||| ||||||||    
T  42881409 atttgagtgtaccggtacaccaaagtctaaaatttatagttaaatgagttattttttgaagaaaaatattattttttatcatttataattataat 42881315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 24291976 - 24292084
Alignment:
Q  149 atggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-aatta 246  Q
    ||||||||||||||| ||||||||||  ||||| ||||||||||||| ||| || | ||||| |||  ||||| |||| ||||||| || |||| |||||    
T  24291976 atggcaaattctatggtacacccaataaatttgggtgtattggtacaccaagtcgtaaaattaata-ataaatgagttgttttttgaagaaaaataatta 24292074  T
Q  247 ttttctatca 256  Q
    ||||||||||    
T  24292075 ttttctatca 24292084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 272
Target Start/End: Complemental strand, 32289310 - 32289190
Alignment:
Q  153 caaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttc 251  Q
    |||||||||||||||||| |||  |||||||| ||||||||||   | || ||||||| |||||||||||| || |||||| |   |||| ||||||||     
T  32289310 caaattctatgatacacctaatatatttgagtttattggtacactcactctttaaattaatagttaaataaattgtttttttttaaaaaatattattttt 32289211  T
Q  252 tatcacctatgattataataa 272  Q
    ||| | |||| ||||||||||    
T  32289210 tattatctataattataataa 32289190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 271
Target Start/End: Original strand, 54996094 - 54996218
Alignment:
Q  148 tatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 246  Q
    ||||| |||||||||| |||||| |||  ||||||||||| ||||| ||  | || ||||||| ||| |||||| |||| ||||||| || |||| ||||    
T  54996094 tatggtaaattctatggtacacctaatatatttgagtgtactggtatattcactctttaaattaataattaaatgagttgttttttgaagaaaaatatta 54996193  T
Q  247 ttttctatcacctatgattataata 271  Q
    |||| |||||  ||| |||||||||    
T  54996194 ttttttatcatttataattataata 54996218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 256
Target Start/End: Complemental strand, 39380810 - 39380699
Alignment:
Q  146 tttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-aat 244  Q
    |||||||||||||||||| ||||  |||  |||| ||||||  |||||| |||||| ||||||| | | |||||| |||| ||||||  || |||| |||    
T  39380810 tttatggcaaattctatggtacattcaaaaatttaagtgtaccggtacaccaaatcattaaattaacaattaaatgagttttttttttaagaaaaagaat 39380711  T
Q  245 tattttctatca 256  Q
    ||||||||||||    
T  39380710 tattttctatca 39380699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 13548812 - 13548703
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgt--aggaaaaaatta 246  Q
    |||||||||| |||| | || ||||  |||||||||||  |||||| |||||| ||||||| ||| |||||| |||| | ||||||  |  |||||||||    
T  13548812 atggcaaattttatggtgcatccaaaaatttgagtgtaccggtacaccaaatcattaaattaataattaaatgagttgtgttttgtgaaaaaaaaaatta 13548713  T
Q  247 ttttctatca 256  Q
    ||||||||||    
T  13548712 ttttctatca 13548703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 5971080 - 5970984
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa-attattttctatcacctatgattataataa 272  Q
    |||||| ||||  |||||||| | || ||||||| |||||||||||| || ||||||| |||||||| |||||||| |||||  ||| ||||||||||    
T  5971080 atttgattgtagcggtacatccactctttaaattaatagttaaataaattgttttttg-aggaaaaatattattttttatcatttataattataataa 5970984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 272
Target Start/End: Complemental strand, 30891453 - 30891420
Alignment:
Q  239 aaaaattattttctatcacctatgattataataa 272  Q
    ||||||||||||||||||||||| ||||||||||    
T  30891453 aaaaattattttctatcacctataattataataa 30891420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 31998781 - 31998850
Alignment:
Q  203 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||| ||||||||||||||  ||||||| || |||| |||||||| |||||  ||| ||||||||||    
T  31998781 ttaaattaatagttaaataagtcgttttttgaagaaaaatattattttttatcatttataattataataa 31998850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 32737595 - 32737474
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| ||||| |||| |||||||||||  ||| || |||||  ||| ||| |||||||||| | || ||||||  || |||| ||||  ||    
T  32737595 ggcaaattctatggtacactcaataatttgagtgtaccggtgcaccaaatatttatattaatagttaaatgaattgttttttaaagaaaaatattacatt 32737496  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||  ||| ||||||||||    
T  32737495 ctatcatttataattataataa 32737474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 40439044 - 40438983
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaatt 209  Q
    |||||||||||||||| ||||| |||  |||||||||||  |||||| |||||| |||||||    
T  40439044 tatggcaaattctatggtacactcaaaaatttgagtgtaccggtacaccaaatcattaaatt 40438983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 31681337 - 31681417
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttt 231  Q
    ||||||||||||| |||||| ||  ||||  ||||||||||||| ||||||  |||||| |||||||| |  |||||||||    
T  31681337 ggcaaattctatggtacacctaaaaattttggtgtattggtacaccaaatcaataaattaatagttaagtgtgttattttt 31681417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 256
Target Start/End: Original strand, 32570370 - 32570474
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtag-gaaaaaattattttc 251  Q
    ||||||||||| |||| ||||   ||||||||||  ||| || |||| | ||||||| ||| |||||| |||||||||||| ||  ||||||| ||||||    
T  32570370 caaattctatggtacatccaaaattttgagtgtaccggtgcaccaaacctttaaattaataattaaattagttattttttgaagaaaaaaaatcattttc 32570469  T
Q  252 tatca 256  Q
    |||||    
T  32570470 tatca 32570474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 37992095 - 37992007
Alignment:
Q  144 gttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 232  Q
    ||||| || |||||| |||| |||||||||   ||||||||||  ||||||||||| | ||||||| ||| |||||| |||| ||||||    
T  37992095 gttttttgacaaattttatggtacacccaacattttgagtgtaccggtacatcaaagcattaaattaataattaaattagttgtttttt 37992007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 52591893 - 52591925
Alignment:
Q  240 aaaattattttctatcacctatgattataataa 272  Q
    |||||||||||||||||||||| ||||||||||    
T  52591893 aaaattattttctatcacctataattataataa 52591925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 4e-47; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 149 - 272
Target Start/End: Original strand, 11227625 - 11227748
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 248  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  11227625 atggcaaattctatggtacatccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaataagttattttttgtaggaaaaaaatatt 11227724  T
Q  249 ttctatcacctatgattataataa 272  Q
    ||||||||||||| ||||||||||    
T  11227725 ttctatcacctataattataataa 11227748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 58920 - 59041
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  58920 ggcaaaatctatggtacacccaataatttgagtgtattggtacatcaaatccttaaattaatagttaaatgagttattttttgtatgaaaaaattatttt 59019  T
Q  251 ctatcacctatgattataataa 272  Q
    |||||| |||||||||||||||    
T  59020 ctatcatctatgattataataa 59041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 149 - 272
Target Start/End: Complemental strand, 42427979 - 42427856
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 248  Q
    ||||||| ||||||| |||||||||  |||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42427979 atggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaataagttattttttgtaggaaaaaattatt 42427880  T
Q  249 ttctatcacctatgattataataa 272  Q
    ||||||||||||| ||||||||||    
T  42427879 ttctatcacctataattataataa 42427856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 6884161 - 6884280
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    ||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  6884161 caaattctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatattttct 6884260  T
Q  253 atcacctatgattataataa 272  Q
    ||||||||| ||||||||||    
T  6884261 atcacctataattataataa 6884280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 14533228 - 14533107
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||||||  |||| | |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  14533228 ggcaaattctatggtacacccaacaatttaaatgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 14533129  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  14533128 ctatcacctataattataataa 14533107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 34665573 - 34665692
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    ||||||||||| || ||||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  34665573 caaattctatggtatacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatattttct 34665672  T
Q  253 atcacctatgattataataa 272  Q
    ||||||||| ||||||||||    
T  34665673 atcacctataattataataa 34665692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 148 - 270
Target Start/End: Complemental strand, 15771719 - 15771597
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||||||||||||||  |||||||||| |||| |||||||||||||| | |||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  15771719 tatggcaaattctatagtacacccaattatttaagtgtattggtacacccaatcattaaattaatagttcaataagttattttttgtaggaaaaaattat 15771620  T
Q  248 tttctatcacctatgattataat 270  Q
    |||||||||||||| ||||||||    
T  15771619 tttctatcacctataattataat 15771597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 4674008 - 4673887
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||| ||||  ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  4674008 ggcaaattctatggtacatccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 4673909  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  4673908 ctatcacctataattataataa 4673887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 5091994 - 5092117
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||||||||||||||| |||| | ||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| |||    
T  5091994 tatggcaaattctatggtacatctaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaa-tat 5092092  T
Q  248 tttctatcacctatgattataataa 272  Q
    |||||||||||||| ||||||||||    
T  5092093 tttctatcacctataattataataa 5092117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 153 - 272
Target Start/End: Complemental strand, 5389605 - 5389486
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    ||||||||||| |||| |||   ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  5389605 caaattctatggtacatccaccaatttgagtgtattggtacaccaaatacttaaattaatagttaaatgagttattttttgtaggaaaaaaatattttct 5389506  T
Q  253 atcacctatgattataataa 272  Q
    ||||||||| ||||||||||    
T  5389505 atcacctataattataataa 5389486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 154 - 272
Target Start/End: Complemental strand, 11813600 - 11813481
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaa-aaaattattttct 252  Q
    |||||||||| |||||||||  ||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||| |||| ||||||||    
T  11813600 aaattctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgtgttattttttgtaggaaaaaaaatattttct 11813501  T
Q  253 atcacctatgattataataa 272  Q
    ||||||||| ||||||||||    
T  11813500 atcacctataattataataa 11813481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 272
Target Start/End: Original strand, 12547358 - 12547485
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 244  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||| |||| |||||| ||||||| ||||||||||  ||||||||||| ||  ||||||    
T  12547358 ttttatggcaaattctatggtacacccaaagatatgagtgtattgatacaccaaatcattaaattaatagttaaatgtgttattttttgaagagaaaaat 12547457  T
Q  245 tattttctatcacctatgattataataa 272  Q
    ||||||||||||||||| ||||||||||    
T  12547458 tattttctatcacctataattataataa 12547485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 3383596 - 3383473
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    ||||||||||| |||| |||| ||||  ||||||||||||||||||| |||||||||||||| |||||||||| ||| |||||||||||||||||||||     
T  3383596 tatggcaaattttatggtacatccaaccatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagtgattttttgtaggaaaaaatta- 3383498  T
Q  248 tttctatcacctatgattataataa 272  Q
    |||||||||||||| | ||||||||    
T  3383497 tttctatcacctataactataataa 3383473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 1353507 - 1353627
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtta-ttttttgtaggaaaaaattattt 249  Q
    ||||||||||||| |||||||||| || |||||||||||||||| |||||||||||||  ||||||||||  |||| ||||||||||||||||| |||||    
T  1353507 ggcaaattctatggtacacccaataatatgagtgtattggtacaccaaatccttaaat--atagttaaatgggttatttttttgtaggaaaaaaatattt 1353604  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  1353605 tctatcacctataattataataa 1353627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 153 - 272
Target Start/End: Complemental strand, 33423420 - 33423299
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattg--atagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||| |||| | ||  |||||| |||||||||||| ||||||||||||||   |||||||||| ||||||||||||||| |||||||||||||    
T  33423420 caaattctatggtacatctaacaatttgaatgtattggtacaccaaatccttaaattataatagttaaatgagttattttttgtagaaaaaaattatttt 33423321  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  33423320 ctatcacctataattataataa 33423299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 272
Target Start/End: Original strand, 37083211 - 37083329
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 253  Q
    ||||| |||| |||| ||||  |||| |||||||||||||| | |||  ||||||| |||||||||| |||||||||||||||||||||| |||||||||    
T  37083211 aaattatatggtacatccaacaatttaagtgtattggtacaccgaatttttaaattaatagttaaatgagttattttttgtaggaaaaaaatattttcta 37083310  T
Q  254 tcacctatgattataataa 272  Q
    |||||||| ||||||||||    
T  37083311 tcacctataattataataa 37083329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 272
Target Start/End: Original strand, 5420241 - 5420348
Alignment:
Q  165 tacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgat 264  Q
    |||||| || |||||||||||||||||||| |||||| ||||||| ||||||||||  | ||||||||| ||  ||||||||||||||||||||||| ||    
T  5420241 tacacctaaagatttgagtgtattggtacaccaaatcattaaattaatagttaaatgtgctattttttgaagagaaaaattattttctatcacctataat 5420340  T
Q  265 tataataa 272  Q
    ||||||||    
T  5420341 tataataa 5420348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 272
Target Start/End: Complemental strand, 6438586 - 6438460
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 244  Q
    ||||||||||||||||||| ||||| ||| ||| | |||||||||||||| |||||| ||||||| ||||||||||  ||||||||||| ||  ||||||    
T  6438586 ttttatggcaaattctatggtacactcaaagatat-agtgtattggtacaccaaatcattaaattaatagttaaatgtgttattttttgaagagaaaaat 6438488  T
Q  245 tattttctatcacctatgattataataa 272  Q
    | |||| |||||||||| ||||||||||    
T  6438487 tgttttatatcacctataattataataa 6438460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 38963470 - 38963349
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtta-ttttttgtaggaaaaaattattt 249  Q
    |||||||| |||| |||| ||||  |||||| ||||||||||||||||||||||||||| ||||||||||  |||| ||||||||| ||||||| |||||    
T  38963470 ggcaaattgtatggtacatccaacaatttgaatgtattggtacatcaaatccttaaattaatagttaaatgggttatttttttgta-gaaaaaaatattt 38963372  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||||||| ||||||||||    
T  38963371 tttatcacctataattataataa 38963349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 36489360 - 36489479
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    ||||||||||  ||||||||| ||||||||||||||||||||  |||||  |||||| ||||||||||   |||||||||| ||  ||||||||||||||    
T  36489360 caaattctattgtacacccaaagatttgagtgtattggtacactaaatcaataaattaatagttaaatgtattattttttgaagagaaaaattattttct 36489459  T
Q  253 atcacctatgattataataa 272  Q
    |||| |||| ||||||||||    
T  36489460 atcatctataattataataa 36489479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 272
Target Start/End: Original strand, 7467114 - 7467248
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatgatttgagtgtattggta-------catcaaatccttaaattgatagttaaataagttattttttgtagg 237  Q
    |||| |||||||||||||| |||||||||  |||||||||||||||||       || ||||||  |||||| ||||||||||  ||||||||||| ||     
T  7467114 ttttttggcaaattctatggtacacccaaaaatttgagtgtattggtatttggtacaccaaatcaataaattaatagttaaatctgttattttttgaaga 7467213  T
Q  238 aaaaaattattttctatcacctatgattataataa 272  Q
     ||||||| ||||||||||||||| ||||||||||    
T  7467214 gaaaaattgttttctatcacctataattataataa 7467248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 272
Target Start/End: Complemental strand, 34438594 - 34438470
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtta-ttttttgtaggaaaaaattat 247  Q
    |||||||||| |||| |||| ||||| ||||||||||||||| ||| ||||||  |||||| ||||||||||  |||| ||||||| ||  |||| || |    
T  34438594 atggcaaattttatggtacatccaataatttgagtgtattggaacaccaaatcaataaattaatagttaaatgtgttatttttttgaagagaaaagttgt 34438495  T
Q  248 tttctatcacctatgattataataa 272  Q
    |||||||||||||| ||||||||||    
T  34438494 tttctatcacctataattataataa 34438470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 40370494 - 40370586
Alignment:
Q  180 gagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||||||||| | ||||||  |||||| ||||||||||  ||||||||||| ||  ||||||||||||||||||||||| ||||||||||    
T  40370494 gagtgtattggtaaaccaaatcaataaattaatagttaaatgtgttattttttgaagagaaaaattattttctatcacctataattataataa 40370586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 151 - 261
Target Start/End: Complemental strand, 6513670 - 6513560
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||| || ||||||||||||||||||||  |||||  |||||| ||||||||||  ||||||||||| ||   |||||| ||||    
T  6513670 ggcaaattctatggtacacctaaagatttgagtgtattggtacactaaatcaataaattaatagttaaatgtgttattttttgaagagtaaaattgtttt 6513571  T
Q  251 ctatcacctat 261  Q
    ||||| |||||    
T  6513570 ctatctcctat 6513560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 8371970 - 8371884
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaa 239  Q
    ||||||||||| |||| ||||| |||| ||||||||| |||| |||||  ||||||| |||||||||||| ||||||||||||||||    
T  8371970 caaattctatggtacatccaataatttaagtgtattgatacaccaaatttttaaattaatagttaaataaattattttttgtaggaa 8371884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 153 - 266
Target Start/End: Original strand, 30980882 - 30980996
Alignment:
Q  153 caaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttc 251  Q
    ||||||||||| ||||||||||  |||| |||||||||||||||  | || ||||||| |||||||||| |||| ||||||| || |||| ||||||||     
T  30980882 caaattctatggtacacccaatatattttagtgtattggtacattcactctttaaattaatagttaaatgagttgttttttgaagaaaaatattattttt 30980981  T
Q  252 tatcacctatgatta 266  Q
    |||||||||| ||||    
T  30980982 tatcacctataatta 30980996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 19636478 - 19636383
Alignment:
Q  177 tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||||||||||||||||| || |||  |||||| ||||||||||| ||||||||||| ||  ||||||| ||||||||||||| |  |||||||||    
T  19636478 tttgagtgtattggtacaccagatcaataaattaatagttaaatatgttattttttgaagagaaaaattgttttctatcacctttatttataataa 19636383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 19835071 - 19834976
Alignment:
Q  177 tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||||||||||||||||| || |||  |||||| ||||||||||| ||||||||||| ||  ||||||| ||||||||||||| |  |||||||||    
T  19835071 tttgagtgtattggtacaccagatcaataaattaatagttaaatatgttattttttgaagagaaaaattgttttctatcacctttatttataataa 19834976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 11598114 - 11598236
Alignment:
Q  151 ggcaaattctatgatacacccaatga-tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| ||||| |||  | |||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| |||    
T  11598114 ggcaaattctatggtacactcaaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgttt 11598213  T
Q  250 tctatcacctatgattataataa 272  Q
    || ||||||||| ||||||||||    
T  11598214 tccatcacctataattataataa 11598236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 37909378 - 37909500
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||||||||  ||||| |||  ||||||||||||| ||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| |||    
T  37909378 tggcaaattctatagtacactcaaaaatttgagtgtattagtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgttt 37909477  T
Q  250 tctatcacctatgattataataa 272  Q
    || ||||||||| ||||||||||    
T  37909478 tccatcacctataattataataa 37909500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 45157527 - 45157636
Alignment:
Q  148 tatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 246  Q
    |||||||||||||||| ||||||||||  |||||||||||  |||||| | | || ||||||| || ||||||| |||| ||||||| || |||| ||||    
T  45157527 tatggcaaattctatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatggttaaatgagttgttttttgaagaaaaatatta 45157626  T
Q  247 ttttctatca 256  Q
    ||||||||||    
T  45157627 ttttctatca 45157636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 40947170 - 40947048
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| | ||||||||  |||||||||||  ||||||   | || ||||||| ||||||||||||||| ||||||| || |||| |||||||    
T  40947170 ggcaaattctatggtgcacccaatatatttgagtgtaccggtacactcactctttaaattaatagttaaataagttgttttttgaagaaaaatattattt 40947071  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||  ||| ||||||||||    
T  40947070 tttatcatttataattataataa 40947048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 3810792 - 3810747
Alignment:
Q  227 ttttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||    
T  3810792 ttttttgtaggaaaaaattattttctatcatctataattataataa 3810747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 20212559 - 20212439
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| ||||| |||  |||| |||||||||||||| ||| ||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  20212559 ggcaaattctatggtacactcaaaaatttaagtgtattggtacaccaa-tcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 20212461  T
Q  251 ctatcacctatgattataataa 272  Q
      ||||||||| ||||||||||    
T  20212460 acatcacctataattataataa 20212439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 39620191 - 39620315
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt--gtaggaaaaaattat 247  Q
    |||||||| |||| ||||||||||  |||||||||||| |||||| | | || ||||||| ||||||||||||||| ||||||  | || |||| |||||    
T  39620191 ggcaaattttatggtacacccaatatatttgagtgtatcggtacacccactctttaaattaatagttaaataagttgtttttttagaagaaaaatattat 39620290  T
Q  248 tttctatcacctatgattataataa 272  Q
    ||| |||||  ||| ||||||||||    
T  39620291 tttttatcatttataattataataa 39620315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 42046076 - 42046132
Alignment:
Q  152 gcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaat 208  Q
    |||||||||||| ||||| |||  ||||||||||||||||||| |||||||||||||    
T  42046076 gcaaattctatggtacactcaacaatttgagtgtattggtacaccaaatccttaaat 42046132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 35896819 - 35896697
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa-attatt 248  Q
    ||||||||||||| ||||| ||||  |||||||||||  |||||| | |  | ||||||| ||||||||||||||| ||||||| |||||||| ||||||    
T  35896819 ggcaaattctatggtacactcaatatatttgagtgtaccggtacacccacactttaaattaatagttaaataagttgttttttg-aggaaaaatattatt 35896721  T
Q  249 ttctatcacctatgattataataa 272  Q
    || |||||  ||| ||||||||||    
T  35896720 ttttatcatttataattataataa 35896697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 32499149 - 32499217
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaa 218  Q
    |||||||||||||| |||||| ||  |||||||||||||| |||| ||||||  |||||| ||||||||    
T  32499149 tggcaaattctatggtacaccaaagaatttgagtgtattgatacaccaaatcaataaattaatagttaa 32499217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 37425570 - 37425514
Alignment:
Q  201 ccttaaattgatagttaaataagttattttttgtaggaaaa-aattattttctatca 256  Q
    ||||||||| |||||||||| |||||||||||| || |||| |||||||||||||||    
T  37425570 ccttaaattaatagttaaatgagttattttttgaagaaaaataattattttctatca 37425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 232
Target Start/End: Complemental strand, 8362818 - 8362731
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 232  Q
    ||||| |||||||||||||| ||||||||  |||||||||||  |||||| |||||  ||||||| ||| |||||  |||| ||||||    
T  8362818 ttttaaggcaaattctatgacacacccaacaatttgagtgtaccggtacaccaaattattaaattaataattaaacgagttgtttttt 8362731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 256
Target Start/End: Original strand, 21425206 - 21425319
Alignment:
Q  145 ttttatggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-- 241  Q
    ||||| ||||||||||||| ||||||||||  ||||| |||||| |||||| ||| || ||||||| |||  ||||| |||| |||||| || |||||      
T  21425206 ttttaaggcaaattctatggtacacccaataaatttgggtgtatcggtacaccaattcgttaaattaata-ataaattagttgttttttataagaaaaat 21425304  T
Q  242 aattattttctatca 256  Q
    |||||||||||||||    
T  21425305 aattattttctatca 21425319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 5615378 - 5615456
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 232  Q
    |||||||||| |||| ||||  |||||||||||  ||||||||||||| |||||||  || | ||||||||| ||||||    
T  5615378 aaattctatggtacatccaaaaatttgagtgtaccggtacatcaaatcgttaaattattaataaaataagttgtttttt 5615456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 9122510 - 9122457
Alignment:
Q  203 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatca 256  Q
    ||||||| |||||||||| |||||||||||| || |||| |||||||| |||||    
T  9122510 ttaaatttatagttaaatgagttattttttgaagaaaaatattattttttatca 9122457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 11088216 - 11088297
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 232  Q
    ||||||||||||| |||||||||  |||||||||||  |||||| |||||  ||||||| ||| |||||  |||| ||||||    
T  11088216 ggcaaattctatggtacacccaaatatttgagtgtaccggtacaccaaattgttaaattaataattaaaagagttgtttttt 11088297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 12071158 - 12071223
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaa 219  Q
    |||||||||| || ||||||  |||||||||||||||||||| ||||  ||||||| ||| |||||    
T  12071158 aaattctatggtatacccaacaatttgagtgtattggtacatgaaattattaaattaataattaaa 12071223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 250
Target Start/End: Original strand, 6945340 - 6945440
Alignment:
Q  151 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| |||| |||||  |||||||||||  |||||| | | |  ||||||| |||||||||| |||| ||||||| || |||| |||||||    
T  6945340 ggcaaattctatggtacatccaatatatttgagtgtaccggtacacccattttttaaattaatagttaaatgagttgttttttgaagaaaaatattattt 6945439  T
Q  250 t 250  Q
    |    
T  6945440 t 6945440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 15176342 - 15176449
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattatt 248  Q
    ||||||||||||| ||||||||||  ||||||||||  ||| || |||| | ||||||| |||  ||||| | || ||||||| || ||||  |||||||    
T  15176342 ggcaaattctatggtacacccaatattttgagtgtaccggtgcaccaaagcattaaattaataagtaaattaattgttttttgaagaaaaaataattatt 15176441  T
Q  249 ttctatca 256  Q
    ||||||||    
T  15176442 ttctatca 15176449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 4e-41; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 30862789 - 30862910
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||||||||  |||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  30862789 ggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 30862888  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  30862889 ctatcacctataattataataa 30862910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 154 - 272
Target Start/End: Complemental strand, 1691394 - 1691277
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 253  Q
    |||||||||| |||| ||||  |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  1691394 aaattctatggtacatccaaccatttgagtgtattggtacatcaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaatta-tttcta 1691296  T
Q  254 tcacctatgattataataa 272  Q
    |||||||| ||||||||||    
T  1691295 tcacctataattataataa 1691277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 38129792 - 38129670
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||| ||||||| || ||||||| ||||||||||||||||||| |||||  ||||||| |||||||||| ||||||||||||||||||||||||||||    
T  38129792 tggcaagttctatggtagacccaataatttgagtgtattggtacaccaaatttttaaattaatagttaaatgagttattttttgtaggaaaaaattattt 38129693  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  38129692 tctatcacctataattataataa 38129670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 41913500 - 41913380
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||| |||| |||| ||||  ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  41913500 ggcaaattatatggtacatccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaataagttattttttgtaggaaaaaa-tatttt 41913402  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  41913401 ctatcacctataattataataa 41913380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 154 - 272
Target Start/End: Original strand, 28326684 - 28326802
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 253  Q
    |||||||||  |||| ||||| ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||| |    
T  28326684 aaattctatcgtacatccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatattttcca 28326783  T
Q  254 tcacctatgattataataa 272  Q
    |||||||| ||||||||||    
T  28326784 tcacctataattataataa 28326802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 30624129 - 30624006
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||| |||||  ||||||| |||||||||| |||||||||||||||||||||||||||||    
T  30624129 ggcaagttctatggtacacccaataatttgagtgtattggtacaccaaatttttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 30624030  T
Q  251 c--tatcacctatgattataataa 272  Q
    |  |||||||||| ||||||||||    
T  30624029 ctatatcacctataattataataa 30624006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 145 - 272
Target Start/End: Original strand, 3909922 - 3910049
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 244  Q
    |||| |||||||||||||| |||||||||  ||||||||||||||||||| | |||  ||||||| |||||||||| |||||||||||||||| |||||     
T  3909922 ttttttggcaaattctatggtacacccaacaatttgagtgtattggtacaccgaatttttaaattaatagttaaatgagttattttttgtagggaaaaaa 3910021  T
Q  245 tattttctatcacctatgattataataa 272  Q
    ||||||||||||||||| ||||||||||    
T  3910022 tattttctatcacctataattataataa 3910049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 41381497 - 41381618
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||| |||| |||||| ||  |||||||||||||||||||||||||| ||||| | |||||||||| ||||||||||||||| |||||| ||||||    
T  41381497 ggcaaattatatggtacaccaaacaatttgagtgtattggtacatcaaatctttaaagtaatagttaaatgagttattttttgtagaaaaaaaatatttt 41381596  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  41381597 ctatcacctataattataataa 41381618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 42710931 - 42711052
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||| | ||| |||| |||| ||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  42710931 ggcaaattctatggtacatctaataatttaagtgcattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 42711030  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  42711031 ctatcacctataattataataa 42711052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 40941872 - 40941997
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtagg-aaaaaatta 246  Q
    |||| ||||||||||| ||||| |||  |||||||||||||||||||  ||||| ||||||| |||||||||| |||||||||||||||| |||||| ||    
T  40941872 tatgacaaattctatggtacactcaacaatttgagtgtattggtacacaaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaaaata 40941971  T
Q  247 ttttctatcacctatgattataataa 272  Q
    ||||||||||||||| ||||||||||    
T  40941972 ttttctatcacctataattataataa 40941997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 45857880 - 45857759
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||| |||||| ||||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  45857880 ggcaaattctatggtacacccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 45857781  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  45857780 ctatcacctataattataataa 45857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 27956376 - 27956498
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaa-ttgatagttaaataagttattttttgtaggaaaaaattatt 248  Q
    |||||||||||||| |||||| ||  |||||||| |||||||||| |||||| ||||| || |||||||||| |||||||||||||||||||||| ||||    
T  27956376 tggcaaattctatggtacacctaacaatttgagtatattggtacaccaaatctttaaaattaatagttaaatgagttattttttgtaggaaaaaa-tatt 27956474  T
Q  249 ttctatcacctatgattataataa 272  Q
    ||||||||||||| ||||||||||    
T  27956475 ttctatcacctataattataataa 27956498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 30936501 - 30936377
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||||  ||||| ||||||| ||||||||||  || |||||||| ||  ||||||| |    
T  30936501 tatggtaaattctatgatacacccaaagatatgagtgtattggtacacaaaatcattaaattaatagttaaatgtgtgattttttgaagagaaaaattgt 30936402  T
Q  248 tttctatcacctatgattataataa 272  Q
    |||||||||||||| ||||||||||    
T  30936401 tttctatcacctataattataataa 30936377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 44964230 - 44964106
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    ||||||||||| |||| |||||| || |||||||||||||||||||| |||||| ||||||| |||||||||||  || ||||||| ||  |||||||||    
T  44964230 tatggcaaattatatggtacacctaaagatttgagtgtattggtacaacaaatcattaaattaatagttaaatattttgttttttgaagagaaaaattat 44964131  T
Q  248 tttctatcacctatgattataataa 272  Q
    ||| |||||||||| ||||||||||    
T  44964130 tttatatcacctataattataataa 44964106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 18990090 - 18990212
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||||||||| |||||| ||  ||||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||||| ||  ||||| |||||    
T  18990090 tggcaaattctatggtacaccaaaaaatttgagtgtattggtacaccaaatcaataaattaatagttaaatatgttattttttgaagagaaaaaatattt 18990189  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||||||| ||||||||||    
T  18990190 tatatcacctataattataataa 18990212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 41331726 - 41331828
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||||||| || |||| |||||| ||  ||||||||||||||||||| |||||||||||||  |||||||||| ||||||||||||||||||||||||||    
T  41331726 tatggcaagttttatggtacacctaacaatttgagtgtattggtacaccaaatccttaaatcaatagttaaatgagttattttttgtaggaaaaaattat 41331825  T
Q  248 ttt 250  Q
    |||    
T  41331826 ttt 41331828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 11485996 - 11486117
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| ||||||||| ||||| || ||||||||||| |||||| ||||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  11485996 ggcaaattctatggtacacccaaagatttaagagtattggtacaccaaatcattaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 11486095  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||| ||| ||||||||||    
T  11486096 ctatcacatataattataataa 11486117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 151 - 254
Target Start/End: Original strand, 23331700 - 23331805
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattg--atagttaaataagttattttttgtaggaaaaaattatt 248  Q
    ||||||||||||| |||||  ||  ||||||||||||||||||| ||||||||||||||   |||||||||| | |||||||||||||||||||||||||    
T  23331700 ggcaaattctatggtacacttaacaatttgagtgtattggtacaccaaatccttaaattataatagttaaatgaattattttttgtaggaaaaaattatt 23331799  T
Q  249 ttctat 254  Q
    ||||||    
T  23331800 ttctat 23331805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 21699696 - 21699577
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||| ||||||||| |||||||||  |||| |||||||||||||| |||||||||||||| |||||||||| ||| ||||||||||| ||||||     |    
T  21699696 tggcgaattctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagtcattttttgtagaaaaaaaaa---t 21699600  T
Q  250 tctatcacctatgattataataa 272  Q
    |||||||||||| ||||||||||    
T  21699599 tctatcacctataattataataa 21699577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 42974895 - 42975016
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||||||  || |||||| ||||||||| |||||| |||||||  |||||||||  |||||||||||  |  ||||||| ||||    
T  42974895 ggcaaattctatggtacacccaaacatatgagtgcattggtacaccaaatcattaaattagtagttaaatgtgttattttttgatgagaaaaattgtttt 42974994  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  42974995 ctatcacctataattataataa 42975016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 47748211 - 47748085
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat--t 245  Q
    ||||| ||||| |||| |||||| ||  |||||| |||||||||| | ||| |||||||||| |||||||||| |||||||||||| || |||||||  |    
T  47748211 tatgggaaattttatggtacacctaaaaatttgaatgtattggtataccaagtccttaaattaatagttaaatgagttattttttgaagaaaaaaataat 47748112  T
Q  246 attttctatcacctatgattataataa 272  Q
    ||| |||||||||||| ||||||||||    
T  47748111 attctctatcacctataattataataa 47748085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 272
Target Start/End: Original strand, 31482378 - 31482495
Alignment:
Q  155 aattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctat 254  Q
    ||||||||| ||||| |||  ||||||||||||||||||| |||||| || |||| ||||||||||   ||| |||||| ||  |||||||  |||||||    
T  31482378 aattctatggtacactcaaatatttgagtgtattggtacaccaaatcattgaattaatagttaaatgtattagtttttgaagagaaaaattgctttctat 31482477  T
Q  255 cacctatgattataataa 272  Q
    ||||||| ||||||||||    
T  31482478 cacctataattataataa 31482495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 30317220 - 30317316
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||| ||||||||||||| ||||||  |||||| ||||||||||  ||||||||||| ||  ||||||| |||| |||||||||| ||||||||||    
T  30317220 atttgggtgtattggtacaccaaatcaataaattaatagttaaatgtgttattttttgaagagaaaaattgttttatatcacctataattataataa 30317316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 31903490 - 31903423
Alignment:
Q  152 gcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaa 219  Q
    ||||||| ||||||||| ||||  |||||| ||||||||||||||||||||||||||| |||||||||    
T  31903490 gcaaattatatgatacatccaacaatttgaatgtattggtacatcaaatccttaaattaatagttaaa 31903423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 43069080 - 43069200
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtag-gaaaaaattattt 249  Q
    |||||||| |||| |||||| || || ||||||||||||||||| |||||  ||||||| ||||  ||||  ||||||||||| || ||||||||| |||    
T  43069080 ggcaaattttatggtacacctaaagacttgagtgtattggtacaccaaattattaaattaatag--aaatgtgttattttttggagagaaaaaattgttt 43069177  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||||||| ||||||||||    
T  43069178 tttatcacctataattataataa 43069200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 272
Target Start/End: Original strand, 43750073 - 43750196
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 248  Q
    ||||||||||||||| ||||| |||  ||||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  |||| || ||    
T  43750073 atggcaaattctatggtacactcaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaatttttt 43750172  T
Q  249 ttctatcacctatgattataataa 272  Q
    | | ||||||||| ||||||||||    
T  43750173 tcccatcacctataattataataa 43750196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 3214571 - 3214640
Alignment:
Q  203 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||| ||||||||||||||||||||||| || |||| |||||||| |||||  ||||||||||||||    
T  3214571 ttaaattaatagttaaataagttattttttgaagaaaaatattattttttatcatttatgattataataa 3214640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 272
Target Start/End: Original strand, 1806484 - 1806603
Alignment:
Q  154 aaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    |||||||||| ||||| ||||  |||||||||||  |||||| | | || ||||||| ||||||||||||||| ||||||| || |||| |||||||| |    
T  1806484 aaattctatggtacactcaatatatttgagtgtaccggtacacctactctttaaattaatagttaaataagttgttttttgaagaaaaatattatttttt 1806583  T
Q  253 atcacctatgattataataa 272  Q
    ||||  ||| ||||||||||    
T  1806584 atcatttataattataataa 1806603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 45458698 - 45458761
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatag 214  Q
    ||||||||||||| |||||||||  |||| |||||||||||||| |||||||||||||| ||||    
T  45458698 ggcaaattctatgttacacccaacaatttaagtgtattggtacaccaaatccttaaattaatag 45458761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 272
Target Start/End: Complemental strand, 8770773 - 8770655
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||||||||||||||| ||||| ||| || || | |||||||||||| |||||| ||||||| ||||||||||  ||||     || ||  ||||||| |    
T  8770773 tatggcaaattctatg-tacacacaaagaattaactgtattggtacaccaaatcattaaattaatagttaaatgtgtta-----tgaagagaaaaattgt 8770680  T
Q  248 tttctatcacctatgattataataa 272  Q
    |||||||||||||| ||||||||||    
T  8770679 tttctatcacctataattataataa 8770655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 20439196 - 20439100
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||||||||||||||| | ||||   ||||| ||| ||||||  ||||||||||| ||  ||||||| |||||||||| |||| ||||||||||    
T  20439196 atttgagtgtattggtacacccaatcaacaaattaataattaaatgtgttattttttgaagagaaaaattgttttctatcatctataattataataa 20439100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 2290787 - 2290890
Alignment:
Q  148 tatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 246  Q
    |||||| ||||||||| |||||||||   |||||||||||  |||||| ||||  |||||||| |||||||||| |||| ||||||| || |||| ||||    
T  2290787 tatggccaattctatggtacacccaacatatttgagtgtaccggtacaccaaacacttaaatttatagttaaatgagttgttttttgaagaaaaatatta 2290886  T
Q  247 tttt 250  Q
    ||||    
T  2290887 tttt 2290890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 41809228 - 41809322
Alignment:
Q  177 tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||||||||||||||||| |||||| |||||||  |||||||||   |||||||||| ||  |||||||  ||||||||| |||| ||||||||||    
T  41809228 tttgagtgtattggtacaccaaatcattaaattagtagttaaatgtattattttttgaagagaaaaatt-gtttctatcatctataattataataa 41809322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 35291733 - 35291627
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||||||||| |||||||||  |||||||||||  ||||||   | || ||||||| || ||||||| |||| ||||||| || |||| |||||||    
T  35291733 ggcaaattctatgacacacccaatatatttgagtgtaccggtacactcactctttaaattaatggttaaatgagttgttttttgaagaaaaatattattt 35291634  T
Q  250 tctatca 256  Q
    |||||||    
T  35291633 tctatca 35291627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 250
Target Start/End: Original strand, 15715904 - 15716004
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| |||||||| |  |||||||||||  |||||| | | || ||||||| |||||||||| |||| ||||||| || |||| |||||||    
T  15715904 ggcaaattctatggtacacccactatatttgagtgtaccggtacacccactctttaaattcatagttaaatgagttgttttttgaagaaaaatattattt 15716003  T
Q  250 t 250  Q
    |    
T  15716004 t 15716004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 256
Target Start/End: Original strand, 47219955 - 47220062
Alignment:
Q  150 tggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-aattat 247  Q
    |||||||||||||| ||||||||||  ||||| |||||| |||||| |||||| | ||||| |||  ||||| |||| ||||||| || |||| ||||||    
T  47219955 tggcaaattctatggtacacccaataaatttgggtgtatcggtacaccaaatcgtaaaattaata-ataaatgagtttttttttgaagaaaaataattat 47220053  T
Q  248 tttctatca 256  Q
    |||||||||    
T  47220054 tttctatca 47220062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 6791844 - 6791737
Alignment:
Q  151 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt-attttttgtaggaaaaaattatt 248  Q
    ||||||||||||| ||||||||||  |||||||||||| ||||||   | || ||||||| || ||||||| ||||  ||||||| || |||| ||||||    
T  6791844 ggcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgagttgtttttttgaagaaaaatattatt 6791745  T
Q  249 ttctatca 256  Q
    ||||||||    
T  6791744 ttctatca 6791737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 41968829 - 41968722
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa-attatt 248  Q
    ||||||||||||| |||||| |||  |||||||||||| ||||||   | || ||||||| || ||||||| |||||||||||  | |||||| ||||||    
T  41968829 ggcaaattctatggtacacctaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgagttatttttttgaagaaaaatattatt 41968730  T
Q  249 ttctatca 256  Q
    ||||||||    
T  41968729 ttctatca 41968722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 256
Target Start/End: Complemental strand, 9682434 - 9682325
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgt--aggaaaaaatta 246  Q
    |||||||||| |||| | || ||||  |||||||||||  |||||| |||||| ||||||| ||| |||||| |||| | ||||||  |  |||||||||    
T  9682434 atggcaaattttatggtgcatccaaaaatttgagtgtaccggtacaccaaatcattaaattaataattaaatgagttgtgttttgtgaaaaaaaaaatta 9682335  T
Q  247 ttttctatca 256  Q
    ||||||||||    
T  9682334 ttttctatca 9682325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 11750828 - 11750706
Alignment:
Q  151 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||| ||||||||||||| |  ||||||||||| |||||||   | || ||||||| |||||||||| |||| ||||||  |  |||| |||||||    
T  11750828 ggcaaattatatgatacacccactctatttgagtgtactggtacactcactctttaaatttatagttaaatgagttgtttttttaaaaaaaatattattt 11750729  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||  ||| ||||||||||    
T  11750728 tttatcatttataattataataa 11750706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 15584899 - 15584826
Alignment:
Q  197 aaatccttaaattgatagttaaataagttattttttgtaggaaaa-aattattttctatcacctatgattataat 270  Q
    ||||||||||||| |||||||||| |||| |||||| || ||||| ||||||||| ||||  |||||||||||||    
T  15584899 aaatccttaaatttatagttaaatgagtttttttttttaagaaaataattattttttatc-tctatgattataat 15584826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 29682070 - 29682164
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 270  Q
    |||||||||||| |||||||||| || |||| || |||  ||||| |||| ||||||| || |||| |||||||| |||||  ||| ||||||||    
T  29682070 atttgagtgtatcggtacatcaactctttaattttataagtaaatgagttgttttttgaagaaaaatattattttttatcatttataattataat 29682164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 35357701 - 35357807
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| |||| |||||  |||||||||||  ||||||   | || ||||||| || ||||||| |||| ||||||| || |||| |||||||    
T  35357701 ggcaaattctatggtacatccaatatatttgagtgtaccggtacactcactctttaaattaatggttaaatgagttgttttttgaagaaaaatattattt 35357800  T
Q  250 tctatca 256  Q
    |||||||    
T  35357801 tctatca 35357807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 7527072 - 7527128
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 232  Q
    ||||||||||||||||| | ||||  |||||||| |||||||||| |||| ||||||    
T  7527072 atttgagtgtattggtataccaaactcttaaattaatagttaaatgagttttttttt 7527128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 30076657 - 30076741
Alignment:
Q  149 atggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 232  Q
    ||||||||||||||| |||||||| |  ||||||||||| | |||||  || || ||||||| |||||||||| |||| ||||||    
T  30076657 atggcaaattctatggtacacccactatatttgagtgtactagtacactaactctttaaattcatagttaaatgagttttttttt 30076741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 4e-41; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 13390385 - 13390506
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||||||||  |||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  13390385 ggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 13390484  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  13390485 ctatcacctataattataataa 13390506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 26358959 - 26358838
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||| |||| ||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  26358959 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaacccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 26358860  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  26358859 ctatcacctataattataataa 26358838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 32834180 - 32834059
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||| |||||| ||||||| |||||| ||| |||||||||||||||||||||||||||||    
T  32834180 ggcaaattctatggtacacctaataatttgagtgtattggtacaccaaatcattaaattaatagttcaatgagttattttttgtaggaaaaaattatttt 32834081  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  32834080 ctatcacctataattataataa 32834059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 17545607 - 17545725
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    ||||||||||| |||||||||  ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  17545607 caaattctatggtacacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaataagttattttttgtaggaaaaaa-tattttct 17545705  T
Q  253 atcacctatgattataataa 272  Q
    ||||||||| ||||||||||    
T  17545706 atcacctataattataataa 17545725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 149 - 272
Target Start/End: Original strand, 6848508 - 6848631
Alignment:
Q  149 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 248  Q
    ||||||||||||||| |||||||||  ||||||||| ||||||| |  ||||||||||||| |||||||||| |||||||||||||||||||||| ||||    
T  6848508 atggcaaattctatggtacacccaacaatttgagtgcattggtatacaaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatatt 6848607  T
Q  249 ttctatcacctatgattataataa 272  Q
    ||||||||||||| ||||||||||    
T  6848608 ttctatcacctataattataataa 6848631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 4110551 - 4110672
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| |||||||||| |||| | | ||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  4110551 ggcaagttctatggtacacccaataatttaaatatattggtacactaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 4110650  T
Q  251 ctatcacctatgattataataa 272  Q
    |||||||||||  |||||||||    
T  4110651 ctatcacctatagttataataa 4110672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 24212912 - 24213032
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||| ||||  |||||||||||||||||||  ||||||||||||| |||||||||| ||| |||||||||| |||||||||| |||    
T  24212912 ggcaaattctatggtacatccaaccatttgagtgtattggtacactaaatccttaaattaatagttaaatgagtgattttttgtaagaaaaaatta-ttt 24213010  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  24213011 ctatcacctataattataataa 24213032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 165 - 272
Target Start/End: Complemental strand, 24487679 - 24487572
Alignment:
Q  165 tacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgat 264  Q
    |||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||| |||||||||| ||||||| ||||||||| ||    
T  24487679 tacacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttataggaaaaaaatattttccatcacctataat 24487580  T
Q  265 tataataa 272  Q
    ||||||||    
T  24487579 tataataa 24487572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 8401822 - 8401702
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||| |||| |||| ||||  ||||||||||||| ||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||| |||    
T  8401822 ggcaaattatatggtacatccaaccatttgagtgtattcgtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaatta-ttt 8401724  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| |||| |||||    
T  8401723 ctatcacctataattaaaataa 8401702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 2258905 - 2259025
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt-ttc 251  Q
    ||||||||||| |||||||||  |||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||||||||||  |   |||    
T  2258905 caaattctatggtacacccaacaatttgagtgtattggtacactaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaaaaaaattc 2259004  T
Q  252 tatcacctatgattataataa 272  Q
    |||||||||| ||||||||||    
T  2259005 tatcacctataattataataa 2259025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 148 - 272
Target Start/End: Original strand, 11446733 - 11446857
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||  |||||| ||||||||||  ||||||||||| ||  ||||||| |    
T  11446733 tatggcaaattctatggtacacccaaagatatgagtgtattggtacaccaaatcaataaattaatagttaaatgtgttattttttgaagagaaaaattgt 11446832  T
Q  248 tttctatcacctatgattataataa 272  Q
    ||||||||| |||| ||||||||||    
T  11446833 tttctatcatctataattataataa 11446857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 151 - 261
Target Start/End: Original strand, 1096221 - 1096331
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||| ||||||| ||||||||||  ||| | ||||||||||||  ||||| ||||||| |||||||||| ||||||||||||||| |||||||||||||    
T  1096221 ggcaagttctatggtacacccaatatttttattgtattggtacactaaatctttaaattaatagttaaatgagttattttttgtagaaaaaaattatttt 1096320  T
Q  251 ctatcacctat 261  Q
    | |||||||||    
T  1096321 cgatcacctat 1096331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 4901330 - 4901236
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||||||||| |||||||||| |||||| ||||||||||    
T  4901330 atttgagtgtattggtacattaaatccttaaattaatagttaaatgaatta-tttttgtaggaaaaaa-tattttctatgacctataattataataa 4901236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 34196215 - 34196094
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||| |||| ||||| |||  |||||||||||||| |  ||||||||  |||||| ||||||||||| ||||||||||  ||  ||||||||||||    
T  34196215 ggcaaattttatggtacactcaaaaatttgagtgtattgattaatcaaatcaataaattaatagttaaatatgttatttttttaagagaaaaattatttt 34196116  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||||||||| ||||||||||    
T  34196115 ctatcacctataattataataa 34196094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 4509429 - 4509552
Alignment:
Q  150 tggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 248  Q
    |||||||||||||| |||||| |||  |||||||||||  |||||| | | || ||||||| ||||||||||||||||||||||| || |||| ||||||    
T  4509429 tggcaaattctatggtacacctaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttattttttgaagaaaaatattatt 4509528  T
Q  249 ttctatcacctatgattataataa 272  Q
    || |||||  ||| ||||||||||    
T  4509529 ttttatcatttataattataataa 4509552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 15383610 - 15383489
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    |||||||| |||| |||| ||||  ||||||||||||||||| | ||||||  ||||||  |||||||||| ||||||||||| ||  ||||||||||||    
T  15383610 ggcaaattatatggtacatccaaaaatttgagtgtattggtataccaaatcagtaaattattagttaaatatgttattttttgaagagaaaaattatttt 15383511  T
Q  251 ctatcacctatgattataataa 272  Q
    ||||| | ||| |||| |||||    
T  15383510 ctatcgcttataattacaataa 15383489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 256
Target Start/End: Complemental strand, 8549967 - 8549855
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaa 243  Q
    |||| |||||||||||||| ||||||||||  |||||||||||| ||||||   | || ||||||| || ||||||| |||||||||||| || |||| |    
T  8549967 ttttttggcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgagttattttttgaagaaaaata 8549868  T
Q  244 ttattttctatca 256  Q
    |||||||||||||    
T  8549867 ttattttctatca 8549855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 271
Target Start/End: Complemental strand, 30020761 - 30020644
Alignment:
Q  154 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 253  Q
    |||||||||| |||| ||||   ||||||||||||| || | ||||||  |||||| ||||||||||  ||||||||||| ||  |||||||  ||||||    
T  30020761 aaattctatggtacatccaaaagtttgagtgtattgatataccaaatcaataaattaatagttaaatgtgttattttttgaagagaaaaattgctttcta 30020662  T
Q  254 tcacctatgattataata 271  Q
    |||||||| |||||||||    
T  30020661 tcacctataattataata 30020644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 250
Target Start/End: Original strand, 9661750 - 9661852
Alignment:
Q  149 atggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 247  Q
    ||||||||||||||| ||||||||||  |||||||||||  |||||| | | || ||||||| |||||||||| |||| ||||||| || |||| |||||    
T  9661750 atggcaaattctatggtacacccaatatatttgagtgtaccggtacacccattctttaaattaatagttaaatgagttgttttttgaagaaaaatattat 9661849  T
Q  248 ttt 250  Q
    |||    
T  9661850 ttt 9661852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 33573994 - 33574119
Alignment:
Q  146 tttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatt 245  Q
    ||||||||||||| |||| |||| |||   |||||||| ||  |||||| | | || ||||||| ||||||||||||||| ||||||| || |||| |||    
T  33573994 tttatggcaaattatatggtacatccatatatttgagtataccggtacacctactctttaaattaatagttaaataagtttttttttgaagaaaaatatt 33574093  T
Q  246 attttctatcacctatgattataata 271  Q
    ||||| |||||  ||| |||||||||    
T  33574094 attttttatcatttataattataata 33574119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 266
Target Start/End: Complemental strand, 6265340 - 6265225
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| |||| | ||  |||||||||||||| |||  ||||||  |||||| |||||| |||  ||||||||||| ||  ||||||| ||||    
T  6265340 ggcaaattctatggtacatctaaaaatttgagtgtattgataccccaaatcaataaattaatagtttaatgtgttattttttgaagagaaaaattgtttt 6265241  T
Q  251 ctatcacctatgatta 266  Q
    ||||||| ||| ||||    
T  6265240 ctatcacatataatta 6265225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 17010360 - 17010482
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||||||||| |||||  ||   ||||  |||||| ||||| ||| ||  |||||| ||||||||||  ||||||||||| ||  ||||||| |||    
T  17010360 tggcaaattctatgctacactaaaatttttggatgtattagtacaccaattcaataaattaatagttaaatgtgttattttttgaagagaaaaattgttt 17010459  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||||||| ||||||||||    
T  17010460 tatatcacctataattataataa 17010482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 8376405 - 8376309
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    |||||| |||||||||||| ||| ||  ||||||  |||||||||  ||||||||||| ||  ||||||| |||||||| | |||| ||||||||||    
T  8376405 atttgaatgtattggtacaccaagtcaataaattattagttaaatgtgttattttttgaagagaaaaattgttttctattatctataattataataa 8376309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 21181133 - 21181220
Alignment:
Q  145 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 232  Q
    ||||| ||||||||||||| ||||| |||  |||||||||||| |||||| |||||| | ||||| ||| | ||| ||||| ||||||    
T  21181133 ttttaaggcaaattctatggtacactcaaaaatttgagtgtatcggtacaccaaatcatcaaatttatattgaaacaagttgtttttt 21181220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 13719112 - 13719194
Alignment:
Q  152 gcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttg 233  Q
    |||||||||| | |||||||||   |||||||||||  ||||||  | ||||||||||| |||||||||| ||||||||||||    
T  13719112 gcaaattctacggtacacccaacatatttgagtgtaccggtacactagatccttaaatttatagttaaatgagttattttttg 13719194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 16892903 - 16893009
Alignment:
Q  151 ggcaaattctatgatacacccaatgattt-gagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| |||||||||   ||| |||||||  ||| || |||| | ||||||| ||| |||||| |||| ||||||| || ||||||| ||||    
T  16892903 ggcaaattctatggtacacccaaaatttttgagtgtaccggtgcaccaaacctttaaattaataattaaattagttgttttttgaagaaaaaaatcattt 16893002  T
Q  250 tctatca 256  Q
    |||||||    
T  16893003 tctatca 16893009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 33574588 - 33574454
Alignment:
Q  140 gtaagttttatggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt-attttttgtagg 237  Q
    |||| |||| |||||||||||||| |||||||| |  |||||||||||| || |||   | || ||||||| |||||||||| ||||  ||||||| ||     
T  33574588 gtaatttttttggcaaattctatggtacacccactatatttgagtgtatcggcacactcactctttaaattcatagttaaatgagttgtttttttgaaga 33574489  T
Q  238 aaaaaattattttctatcacctatgattataataa 272  Q
    |||| |||||||| |||||  ||| ||||||||||    
T  33574488 aaaatattattttttatcatttataattataataa 33574454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 11763527 - 11763458
Alignment:
Q  203 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||| ||||||||||||||| ||||||| || |||| ||||||||  ||||  ||| ||||||||||    
T  11763527 ttaaattaatagttaaataagttgttttttgaagaaaaatattatttttgatcatttataattataataa 11763458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 7344725 - 7344673
Alignment:
Q  148 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaat 200  Q
    |||||||||||||||| |||||||||  |||||||||||  |||||| |||||    
T  7344725 tatggcaaattctatggtacacccaacaatttgagtgtaccggtacaccaaat 7344673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 48035 - 48131
Alignment:
Q  176 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 272  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| | |||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  48035 atttgagtgtattggtacaccaaatccttaaattaatagttaaatgatttattttttgtaggaaaaaaatattttctatcacctataattataataa 48131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 37015 - 36894
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 250  Q
    ||||||||||||| ||||| |||  |||||||||||||| |||| |||||||||||||| |||||||||| ||||||||||||||| |||||| ||||||    
T  37015 ggcaaattctatggtacactcaacaatttgagtgtattgatacaccaaatccttaaattaatagttaaatgagttattttttgtagaaaaaaaatatttt 36916  T
Q  251 ctatcacctatgattataataa 272  Q
      ||||||||| ||||||||||    
T  36915 tcatcacctataattataataa 36894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 272
Target Start/End: Complemental strand, 6670 - 6548
Alignment:
Q  150 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    |||||||||||||| |||||| ||  ||||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||||| ||  ||||| |||||    
T  6670 tggcaaattctatggtacaccaaaaaatttgagtgtattggtacaccaaatcaataaattaatagttaaatatgttattttttgaagagaaaaaatattt 6571  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||||||| ||||||||||    
T  6570 tatatcacctataattataataa 6548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 3436 - 3314
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 249  Q
    ||||||||||||| ||||||||||  |||||||||||   ||||| | | || ||||||| ||||||||||||||||||||||| || |||| |||||||    
T  3436 ggcaaattctatggtacacccaatatatttgagtgtaccagtacacctactctttaaattaatagttaaataagttattttttgaagaaaaatattattt 3337  T
Q  250 tctatcacctatgattataataa 272  Q
    | |||||  ||| ||||||||||    
T  3336 tttatcatttataattataataa 3314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 2022 - 2141
Alignment:
Q  153 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 252  Q
    ||||||||||| ||||| |||  ||||||||||||||||||| | ||||   ||||| ||||||||||   |||||||||| ||  ||||||| |||||     
T  2022 caaattctatggtacactcaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtcttattttttgaagagaaaaattgttttcc 2121  T
Q  253 atcacctatgattataataa 272  Q
    ||||||||| ||||||||||    
T  2122 atcacctataattataataa 2141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 29259 - 29362
Alignment:
Q  165 tacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgat 264  Q
    |||||||||  ||||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  | ||||| ||||| ||||||||| ||    
T  29259 tacacccaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagagaaattgttttccatcacctataat 29358  T
Q  265 tata 268  Q
    ||||    
T  29359 tata 29362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 250
Target Start/End: Original strand, 45761 - 45862
Alignment:
Q  151 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa-attatt 248  Q
    ||||||||||||| |||| ||||   |||||||||||| | ||||||||||| ||||||| |||||||| | |||| ||||||  |||||||| ||||||    
T  45761 ggcaaattctatggtacatccaaaatatttgagtgtatcgatacatcaaatctttaaattaatagttaagtgagttgtttttttaaggaaaaatattatt 45860  T
Q  249 tt 250  Q
    ||    
T  45861 tt 45862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 256
Target Start/End: Complemental strand, 250 - 139
Alignment:
Q  146 tttatggcaaattctatgatacacccaa-tgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 244  Q
    |||||||||||||||||| |||||||||   |||||||||||  |||||| |||  | |||| || |||| ||||| |||| ||||||| || |||| ||    
T  250 tttatggcaaattctatggtacacccaacatatttgagtgtaccggtacaccaaccctttaattttataggtaaatgagttgttttttgaagaaaaatat 151  T
Q  245 tattttctatca 256  Q
    |||||| |||||    
T  150 tattttttatca 139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 47981 - 47875
Alignment:
Q  151 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-aattattt 249  Q
    ||||||||||||| |||||  ||  |||||||||||  |||||| |||||| ||||||| | | |||||| |||| |||||||| | |||| ||||||||    
T  47981 ggcaaattctatggtacacttaaaaatttgagtgtaccggtacaccaaatcgttaaattcacaattaaatgagttgttttttgttgaaaaataattattt 47882  T
Q  250 tctatca 256  Q
    | |||||    
T  47881 tttatca 47875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 256
Target Start/End: Complemental strand, 16992 - 16883
Alignment:
Q  148 tatggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 246  Q
    |||||||||||||||| ||||||||||  |||||||||||| ||||||   | || ||||||| || ||||||| || | ||||||  || |||  ||||    
T  16992 tatggcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgagatgtttttttaagaaaattatta 16893  T
Q  247 ttttctatca 256  Q
    ||||||||||    
T  16892 ttttctatca 16883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 32617 - 32682
Alignment:
Q  205 aaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 270  Q
    ||||| ||||||||||||||| ||||||| || |||| |||||||| |||||  ||| ||||||||    
T  32617 aaatttatagttaaataagttgttttttgaagaaaaatattattttttatcatgtataattataat 32682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 256
Target Start/End: Original strand, 55852 - 55961
Alignment:
Q  148 tatggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 246  Q
    |||||||||||||||| ||||||||||  |||||||||||| ||||||   | || ||||||| || ||||||| || | ||||||  || |||  ||||    
T  55852 tatggcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgagatgtttttttaagaaaattatta 55951  T
Q  247 ttttctatca 256  Q
    ||||||||||    
T  55952 ttttctatca 55961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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