View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20094_high_94 (Length: 226)
Name: NF20094_high_94
Description: NF20094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20094_high_94 |
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Alignment Details
Target: chr8 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 16 - 210
Target Start/End: Complemental strand, 37134491 - 37134300
Alignment:
| Q |
16 |
attctagtgacagacgaaaccttttacatgcatacacaataaactcaggaaacattgaaaataataaaaaagattaacacccacatgtagaatgggataa |
115 |
Q |
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| T |
37134491 |
attctagtgacagacgaaaccttttacatgcatacacaataaactcaggaaacattgaaaataataaaaa-gattaacacccacatgtagaatgggataa |
37134393 |
T |
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| Q |
116 |
caagaaggcgatgaagaaattgcgtcttccatttttcctttaaaaattcgttagtacgtggttcataatcttttttatagacaacatgttaaata |
210 |
Q |
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| T |
37134392 |
caagaaggcgatgaagaaattgcgtcttccatttttcctttaaaaattcgttagtacgtggttcataatc--ttttatagacaacatgttaaata |
37134300 |
T |
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