View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20094_high_96 (Length: 225)

Name: NF20094_high_96
Description: NF20094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20094_high_96
NF20094_high_96
[»] chr4 (53 HSPs)
chr4 (1-159)||(21433930-21434088)
chr4 (77-196)||(993219-993336)
chr4 (108-196)||(34119640-34119728)
chr4 (68-147)||(33413994-33414073)
chr4 (54-159)||(2247636-2247739)
chr4 (54-147)||(52374894-52374987)
chr4 (54-159)||(2324735-2324840)
chr4 (94-159)||(16457937-16458002)
chr4 (54-159)||(31758666-31758769)
chr4 (56-196)||(993219-993357)
chr4 (94-146)||(19382314-19382366)
chr4 (103-159)||(45654068-45654124)
chr4 (155-196)||(21433873-21433914)
chr4 (65-137)||(21433861-21433933)
chr4 (63-137)||(1338419-1338491)
chr4 (61-124)||(7403175-7403238)
chr4 (56-159)||(15134546-15134649)
chr4 (149-196)||(33414003-33414050)
chr4 (149-196)||(41840593-41840640)
chr4 (56-137)||(32286310-32286391)
chr4 (64-124)||(3688663-3688723)
chr4 (148-196)||(7403174-7403222)
chr4 (141-193)||(9023994-9024046)
chr4 (103-159)||(17181276-17181332)
chr4 (149-196)||(15134567-15134614)
chr4 (54-125)||(15134658-15134729)
chr4 (149-196)||(16457920-16457967)
chr4 (68-158)||(9023901-9023991)
chr4 (150-196)||(16577253-16577299)
chr4 (150-196)||(52375010-52375056)
chr4 (56-137)||(41840572-41840653)
chr4 (147-196)||(41840682-41840731)
chr4 (103-147)||(3688596-3688640)
chr4 (63-167)||(42516494-42516598)
chr4 (149-196)||(3688570-3688617)
chr4 (149-196)||(21433965-21434012)
chr4 (77-160)||(25592252-25592335)
chr4 (149-196)||(52374917-52374964)
chr4 (94-144)||(32286249-32286299)
chr4 (147-189)||(38036244-38036286)
chr4 (65-122)||(2247568-2247625)
chr4 (147-192)||(2324762-2324807)
chr4 (142-183)||(3688656-3688697)
chr4 (155-196)||(17508765-17508806)
chr4 (106-159)||(52820373-52820426)
chr4 (157-196)||(1338433-1338470)
chr4 (149-193)||(2247671-2247715)
chr4 (68-140)||(16577327-16577399)
chr4 (149-193)||(19382300-19382344)
chr4 (141-189)||(31758771-31758819)
chr4 (149-189)||(32286323-32286363)
chr4 (103-151)||(51578030-51578078)
chr4 (103-147)||(53127988-53128032)
[»] chr6 (36 HSPs)
chr6 (55-196)||(1473593-1473735)
chr6 (106-187)||(28865439-28865520)
chr6 (61-159)||(4483352-4483448)
chr6 (87-159)||(11650899-11650971)
chr6 (56-191)||(19711617-19711752)
chr6 (64-122)||(4033086-4033144)
chr6 (106-160)||(5706647-5706701)
chr6 (142-196)||(5706704-5706758)
chr6 (150-196)||(12731647-12731693)
chr6 (146-196)||(24783955-24784005)
chr6 (56-137)||(479782-479863)
chr6 (56-125)||(5706710-5706779)
chr6 (54-147)||(12731623-12731716)
chr6 (55-160)||(31989190-31989295)
chr6 (149-193)||(1473618-1473662)
chr6 (103-159)||(6643372-6643428)
chr6 (155-191)||(24110068-24110104)
chr6 (142-193)||(12731557-12731608)
chr6 (106-144)||(3150238-3150276)
chr6 (155-193)||(4494397-4494435)
chr6 (56-122)||(17389991-17390057)
chr6 (103-144)||(24783892-24783933)
chr6 (141-196)||(11650973-11651029)
chr6 (56-120)||(24110042-24110106)
chr6 (61-124)||(4787809-4787872)
chr6 (153-191)||(4032992-4033030)
chr6 (146-196)||(17600694-17600744)
chr6 (54-124)||(17600697-17600767)
chr6 (155-196)||(4033090-4033131)
chr6 (94-123)||(6643332-6643361)
chr6 (54-131)||(12424939-12425014)
chr6 (155-196)||(17389995-17390036)
chr6 (95-143)||(3625135-3625183)
chr6 (56-124)||(12731533-12731601)
chr6 (107-159)||(31054684-31054736)
chr6 (149-193)||(34093904-34093948)
[»] chr2 (54 HSPs)
chr2 (54-159)||(42094260-42094364)
chr2 (56-159)||(25666855-25666958)
chr2 (141-196)||(25666798-25666853)
chr2 (54-159)||(18719710-18719813)
chr2 (106-159)||(1469796-1469849)
chr2 (54-147)||(3466456-3466549)
chr2 (61-137)||(15194519-15194595)
chr2 (62-136)||(35715053-35715127)
chr2 (155-196)||(23001430-23001471)
chr2 (56-137)||(37810125-37810206)
chr2 (60-124)||(12703455-12703519)
chr2 (141-196)||(3466388-3466442)
chr2 (82-137)||(33171678-33171733)
chr2 (150-193)||(35715066-35715109)
chr2 (56-123)||(41496038-41496105)
chr2 (141-196)||(42029426-42029481)
chr2 (149-196)||(42094294-42094341)
chr2 (149-196)||(42251255-42251302)
chr2 (150-196)||(1930670-1930716)
chr2 (77-147)||(2683445-2683515)
chr2 (155-193)||(18719734-18719772)
chr2 (141-187)||(37810155-37810201)
chr2 (147-196)||(12703472-12703521)
chr2 (147-196)||(16209375-16209424)
chr2 (141-194)||(33069169-33069222)
chr2 (149-194)||(33171691-33171736)
chr2 (94-159)||(37810203-37810268)
chr2 (155-196)||(42251163-42251204)
chr2 (82-147)||(45300436-45300501)
chr2 (87-159)||(1930680-1930752)
chr2 (103-147)||(4237319-4237363)
chr2 (156-196)||(45300367-45300407)
chr2 (149-196)||(1469739-1469786)
chr2 (142-181)||(18719816-18719854)
chr2 (56-123)||(33069146-33069213)
chr2 (87-142)||(33171609-33171664)
chr2 (94-145)||(42251180-42251231)
chr2 (149-196)||(44247538-44247585)
chr2 (55-125)||(12779480-12779549)
chr2 (149-183)||(35714987-35715021)
chr2 (150-196)||(41496059-41496105)
chr2 (149-183)||(44247630-44247664)
chr2 (68-137)||(1469730-1469799)
chr2 (153-202)||(2683472-2683521)
chr2 (56-137)||(16209454-16209535)
chr2 (87-156)||(33069227-33069296)
chr2 (110-171)||(36592163-36592224)
chr2 (155-196)||(42029342-42029383)
chr2 (94-158)||(8543596-8543660)
chr2 (65-137)||(9430216-9430288)
chr2 (148-196)||(9430228-9430276)
chr2 (77-125)||(42251254-42251302)
chr2 (103-147)||(44247564-44247608)
chr2 (149-193)||(45300459-45300503)
[»] chr3 (51 HSPs)
chr3 (55-191)||(26986271-26986406)
chr3 (54-159)||(36480764-36480869)
chr3 (74-143)||(3901566-3901635)
chr3 (87-196)||(3901509-3901632)
chr3 (114-196)||(1458540-1458620)
chr3 (65-159)||(32880985-32881079)
chr3 (94-159)||(11532492-11532557)
chr3 (54-147)||(19560606-19560699)
chr3 (77-196)||(799260-799380)
chr3 (141-196)||(14345151-14345206)
chr3 (157-196)||(19560729-19560768)
chr3 (149-196)||(31205369-31205416)
chr3 (141-196)||(32881081-32881136)
chr3 (61-147)||(29955022-29955108)
chr3 (61-147)||(30004176-30004262)
chr3 (150-196)||(44890430-44890476)
chr3 (110-159)||(14345208-14345257)
chr3 (55-156)||(31205347-31205448)
chr3 (94-159)||(35357374-35357439)
chr3 (110-147)||(35527126-35527163)
chr3 (55-124)||(36007447-36007516)
chr3 (64-125)||(36480694-36480755)
chr3 (61-138)||(37189222-37189299)
chr3 (54-145)||(36026863-36026952)
chr3 (103-159)||(37341250-37341305)
chr3 (149-196)||(3901499-3901546)
chr3 (141-183)||(31205453-31205495)
chr3 (56-144)||(16993339-16993425)
chr3 (147-196)||(40554128-40554177)
chr3 (62-147)||(51541314-51541399)
chr3 (111-147)||(4304795-4304831)
chr3 (103-159)||(19158685-19158741)
chr3 (56-124)||(35357296-35357364)
chr3 (157-189)||(35357324-35357356)
chr3 (153-196)||(4277075-4277118)
chr3 (149-196)||(11532527-11532574)
chr3 (149-196)||(31524070-31524116)
chr3 (94-137)||(35414986-35415029)
chr3 (148-191)||(37189235-37189278)
chr3 (61-143)||(40554025-40554104)
chr3 (98-145)||(46492591-46492638)
chr3 (55-125)||(1458628-1458698)
chr3 (74-160)||(1753313-1753399)
chr3 (140-194)||(32880999-32881053)
chr3 (147-196)||(1753316-1753365)
chr3 (94-143)||(13540193-13540242)
chr3 (56-137)||(14345130-14345211)
chr3 (155-196)||(46555590-46555631)
chr3 (149-181)||(35357409-35357441)
chr3 (149-189)||(49750609-49750649)
chr3 (87-143)||(49750612-49750668)
[»] chr8 (44 HSPs)
chr8 (56-159)||(42072641-42072742)
chr8 (61-147)||(40694682-40694768)
chr8 (55-191)||(40566481-40566617)
chr8 (94-161)||(20271023-20271092)
chr8 (94-161)||(21057651-21057720)
chr8 (54-145)||(8402549-8402638)
chr8 (114-193)||(23848267-23848346)
chr8 (76-159)||(34504434-34504517)
chr8 (54-168)||(38357546-38357660)
chr8 (94-159)||(26018517-26018582)
chr8 (94-159)||(35586421-35586485)
chr8 (56-124)||(20271105-20271173)
chr8 (56-124)||(21057733-21057801)
chr8 (54-137)||(36009901-36009984)
chr8 (106-159)||(40175951-40176004)
chr8 (94-171)||(42209406-42209483)
chr8 (94-146)||(40696205-40696257)
chr8 (149-196)||(2288599-2288646)
chr8 (141-196)||(27072899-27072954)
chr8 (141-196)||(36009906-36009961)
chr8 (141-196)||(40694613-40694668)
chr8 (141-196)||(40696272-40696327)
chr8 (62-159)||(2288584-2288681)
chr8 (56-125)||(2288690-2288759)
chr8 (103-160)||(4994181-4994238)
chr8 (106-159)||(13260421-13260474)
chr8 (82-159)||(38835005-38835082)
chr8 (147-196)||(40566546-40566595)
chr8 (148-196)||(20271104-20271152)
chr8 (148-196)||(21057732-21057780)
chr8 (61-137)||(27072894-27072970)
chr8 (55-134)||(30649928-30650005)
chr8 (149-189)||(34504384-34504424)
chr8 (95-147)||(43042157-43042208)
chr8 (61-124)||(17893301-17893364)
chr8 (87-137)||(34504387-34504437)
chr8 (140-196)||(4994238-4994292)
chr8 (61-157)||(9814041-9814135)
chr8 (140-196)||(24306347-24306404)
chr8 (141-194)||(38357571-38357624)
chr8 (106-151)||(42886516-42886561)
chr8 (157-196)||(20271008-20271045)
chr8 (157-196)||(21057636-21057673)
chr8 (149-185)||(42072671-42072707)
[»] chr7 (41 HSPs)
chr7 (56-159)||(12275795-12275898)
chr7 (54-159)||(40134443-40134546)
chr7 (54-147)||(26862982-26863075)
chr7 (94-196)||(29356934-29357036)
chr7 (76-137)||(2276276-2276337)
chr7 (64-141)||(49106980-49107057)
chr7 (77-159)||(11201293-11201375)
chr7 (64-124)||(3235546-3235606)
chr7 (149-196)||(2276277-2276324)
chr7 (142-196)||(3235559-3235613)
chr7 (150-196)||(7017179-7017225)
chr7 (150-196)||(7032537-7032583)
chr7 (54-156)||(10056683-10056785)
chr7 (150-196)||(49106998-49107044)
chr7 (147-196)||(316449-316498)
chr7 (103-144)||(24516582-24516623)
chr7 (64-147)||(47497769-47497852)
chr7 (150-196)||(5443622-5443668)
chr7 (150-196)||(5452667-5452713)
chr7 (56-122)||(31042118-31042184)
chr7 (106-147)||(2276346-2276387)
chr7 (94-159)||(3235616-3235681)
chr7 (55-144)||(5443602-5443690)
chr7 (55-123)||(5452667-5452735)
chr7 (87-159)||(7017143-7017215)
chr7 (87-159)||(7032501-7032573)
chr7 (61-125)||(31042394-31042458)
chr7 (94-137)||(7526135-7526178)
chr7 (145-196)||(26647691-26647742)
chr7 (142-196)||(46074140-46074192)
chr7 (141-196)||(47497784-47497839)
chr7 (94-144)||(18089774-18089824)
chr7 (94-159)||(2417118-2417182)
chr7 (155-196)||(12275836-12275877)
chr7 (94-159)||(46074112-46074177)
chr7 (103-159)||(7526175-7526231)
chr7 (87-135)||(10056633-10056681)
chr7 (149-193)||(18089794-18089838)
chr7 (149-196)||(26862915-26862960)
chr7 (149-181)||(29356932-29356964)
chr7 (65-125)||(40803234-40803294)
[»] chr1 (39 HSPs)
chr1 (141-196)||(2542702-2542757)
chr1 (61-147)||(34437666-34437752)
chr1 (54-137)||(49822607-49822690)
chr1 (55-147)||(38663629-38663721)
chr1 (56-159)||(45563045-45563148)
chr1 (149-196)||(49822620-49822667)
chr1 (87-145)||(34437608-34437666)
chr1 (56-137)||(40669008-40669087)
chr1 (56-159)||(7444260-7444363)
chr1 (61-138)||(21281461-21281539)
chr1 (150-196)||(31970120-31970166)
chr1 (155-196)||(34437598-34437639)
chr1 (67-159)||(40374094-40374183)
chr1 (98-146)||(2542772-2542820)
chr1 (148-196)||(16661815-16661863)
chr1 (149-196)||(34437689-34437736)
chr1 (141-192)||(45563150-45563201)
chr1 (150-196)||(38663651-38663697)
chr1 (155-193)||(40669027-40669065)
chr1 (56-125)||(7444372-7444441)
chr1 (110-159)||(23317942-23317991)
chr1 (150-191)||(31851952-31851993)
chr1 (74-159)||(31970177-31970262)
chr1 (103-151)||(11120328-11120376)
chr1 (141-196)||(38663735-38663790)
chr1 (87-137)||(31970130-31970180)
chr1 (106-159)||(731387-731440)
chr1 (56-125)||(939425-939494)
chr1 (149-186)||(939426-939463)
chr1 (72-137)||(2542697-2542762)
chr1 (149-190)||(2542794-2542835)
chr1 (94-159)||(40668946-40669011)
chr1 (150-178)||(11105966-11105994)
chr1 (54-118)||(15366478-15366542)
chr1 (103-139)||(22336918-22336954)
chr1 (149-193)||(40374128-40374172)
chr1 (157-196)||(40668931-40668968)
chr1 (140-196)||(43884468-43884524)
chr1 (141-189)||(49403556-49403604)
[»] chr5 (42 HSPs)
chr5 (63-159)||(36059264-36059360)
chr5 (98-184)||(35244861-35244947)
chr5 (103-159)||(3907711-3907767)
chr5 (56-137)||(3907635-3907714)
chr5 (141-196)||(25545220-25545273)
chr5 (56-159)||(27195309-27195411)
chr5 (103-158)||(38029566-38029621)
chr5 (94-147)||(4190076-4190129)
chr5 (94-159)||(25545275-25545340)
chr5 (148-196)||(28907368-28907416)
chr5 (148-196)||(28943763-28943811)
chr5 (56-120)||(35244916-35244980)
chr5 (96-159)||(4158136-4158199)
chr5 (54-125)||(17474864-17474935)
chr5 (149-196)||(41169482-41169529)
chr5 (141-187)||(22399779-22399825)
chr5 (94-151)||(22399835-22399892)
chr5 (56-124)||(25545199-25545265)
chr5 (94-159)||(41169407-41169472)
chr5 (56-137)||(4190138-4190221)
chr5 (141-196)||(25545302-25545355)
chr5 (149-196)||(17474865-17474912)
chr5 (54-137)||(22399747-22399830)
chr5 (141-188)||(33029578-33029625)
chr5 (141-196)||(40927690-40927745)
chr5 (149-196)||(42249410-42249457)
chr5 (157-196)||(42420017-42420056)
chr5 (140-186)||(3416273-3416319)
chr5 (149-183)||(4190072-4190106)
chr5 (141-196)||(4190143-4190200)
chr5 (150-196)||(32309690-32309736)
chr5 (155-196)||(4158177-4158218)
chr5 (56-137)||(33029473-33029554)
chr5 (54-159)||(42419994-42420099)
chr5 (146-187)||(42420106-42420147)
chr5 (94-181)||(1569978-1570066)
chr5 (103-159)||(3771223-3771279)
chr5 (141-196)||(3907656-3907709)
chr5 (147-179)||(22399860-22399892)
chr5 (65-137)||(40529937-40530009)
chr5 (56-124)||(41169482-41169550)
chr5 (56-124)||(42420109-42420177)
[»] scaffold0003 (2 HSPs)
scaffold0003 (49-143)||(136394-136488)
scaffold0003 (157-196)||(136421-136460)
[»] scaffold0015 (1 HSPs)
scaffold0015 (54-148)||(201025-201119)
[»] scaffold0137 (1 HSPs)
scaffold0137 (74-145)||(8251-8322)
[»] scaffold0620 (1 HSPs)
scaffold0620 (149-193)||(9238-9282)


Alignment Details
Target: chr4 (Bit Score: 127; Significance: 1e-65; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 21434088 - 21433930
Alignment:
Q  1 aacggcaaagaaaacgcactatatgttcgagatccctatttaaatagtagaggggaatggtagcaacacacattttaacatacacctttcaagacactct 100  Q
    ||||||||||||||| || || ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  21434088 aacggcaaagaaaacacagtagatgatccagatccctatttaaatagtagaggggaatggtagcaacacacattttaacatacacttttcaacacactct 21433989  T
Q  101 cattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21433988 cattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatataaattt 21433930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 77 - 196
Target Start/End: Original strand, 993219 - 993336
Alignment:
Q  77 aacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattttaaccaatcaaagagag 176  Q
    |||| ||| ||||||| |||||||  ||||||||||||||||||||||  ||||||||||||||||||||| ||||| |||| |||| ||||||||||||    
T  993219 aacacacatctttcaacacactct--ttgattggttaaaattcacatgagtcccaccaaatcatgtgggtcccatgtgaattctaacaaatcaaagagag 993316  T
Q  177 tgtgttgaaaaatgtgtgtt 196  Q
    | ||||| ||| ||||||||    
T  993317 tttgttggaaagtgtgtgtt 993336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 34119728 - 34119640
Alignment:
Q  108 tggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||||||||||||| ||| || ||||||||||| |||||||| |||||||||| ||||||  |||||||||||||||||||||||    
T  34119728 tggttaaaattcacatgggtcctactaaatcatgtggatctcatgtgaattttaaccgatcaaaacgagtgtgttgaaaaatgtgtgtt 34119640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 33413994 - 33414073
Alignment:
Q  68 acacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    ||||||| ||||| |||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  33413994 acacattgtaacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaccaaatcacgtgggtc 33414073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 2247739 - 2247636
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgt 153  Q
    |||||| || |||||||||||||||||  ||| || |||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||| |    
T  2247739 ggaatgctaacaacacacattttaaca--cactttccaacccactctctttgattggttaaaattaacatggatcccaccaaatcatgtgggtcgcatat 2247642  T
Q  154 aaattt 159  Q
    ||||||    
T  2247641 aaattt 2247636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 52374894 - 52374987
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||||| || ||||||||||||||||| |||| |||||| |||||||| ||||| | |||||||||||||||||| |||||||| |||||||||    
T  52374894 ggaatgctaacaacacacattttaacacacacttttcaacacactctctttgatagattaaaattcacatggatctcaccaaattatgtgggtc 52374987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 2324735 - 2324840
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgt 153  Q
    |||||| || ||||||||||||||||  |||| |||||| | |||||| ||||||||||||||||||||||  |  |||||||||||||||||| ||| |    
T  2324735 ggaatgataacaacacacattttaacgcacacttttcaatatactctctttgattggttaaaattcacatgagtttcaccaaatcatgtgggtcccatat 2324834  T
Q  154 aaattt 159  Q
    ||||||    
T  2324835 aaattt 2324840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 16457937 - 16458002
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  16457937 acactctctttgattggttaaaattcacatggatcccatcaaatcatgtgggtcccatataaattt 16458002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 31758666 - 31758769
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgt 153  Q
    |||||||||  ||||||||||||||||  ||| |||||| ||| |||  |||||||||||||||||||||     |||||||||||||||||||||||||    
T  31758666 ggaatggtaaaaacacacattttaaca--cacttttcaacacattctatttgattggttaaaattcacataagctccaccaaatcatgtgggtctcatgt 31758763  T
Q  154 aaattt 159  Q
    ||||||    
T  31758764 aaattt 31758769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 993357 - 993219
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaa 155  Q
    |||| ||||||||||||| |||||| |||| || ||| | |||||| |||||| |||| |||||||||||  |||||   ||   ||||| ||||||| |    
T  993357 aatgctagcaacacacatcttaacacacactttccaacaaactctctttgatttgttagaattcacatgggacccacatgatttggtgggactcatgtga 993258  T
Q  156 attttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||||||||||  |||||||||||||| |||||||||    
T  993257 attttaaccaatcaa--agagtgtgttgaaagatgtgtgtt 993219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 19382314 - 19382366
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggt 146  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  19382314 acactctatttgattggttaaaattcacatggatcccaccaaatcatgtgggt 19382366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 45654124 - 45654068
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  45654124 ttgattggttaaaattcacatggatcccatcaaatcatgtgggtcccatataaattt 45654068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 21433914 - 21433873
Alignment:
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21433914 aattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 21433873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 21433861 - 21433933
Alignment:
Q  65 aacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||||||||||||||| |||  |||||| |||||||| ||||||||||||||||||||||   ||||||||||    
T  21433861 aacacacattttaacacacatttttcaacacactctctttgattggttaaaattcacatgagacccaccaaat 21433933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 1338419 - 1338491
Alignment:
Q  63 gcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||||||| ||||||||| |||  ||||||  ||||||| |||||||||||||| ||||||||||||||||||||    
T  1338419 gcaacacatattttaacacacatttttcaa--cactctctttgattggttaaaaatcacatggatcccaccaaat 1338491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 7403238 - 7403175
Alignment:
Q  61 tagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatg 124  Q
    |||||||||| ||||||||| ||||  ||||| |||||||| ||||||||||||||||||||||    
T  7403238 tagcaacacatattttaacacacactattcaacacactctctttgattggttaaaattcacatg 7403175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 15134546 - 15134649
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaa 155  Q
    |||| ||| |||||| ||||||||| |||  |||||| ||| |||| || |||||||||||||||||||| ||| || ||||||| |||||| ||| |||    
T  15134546 aatgctagtaacacaaattttaacacacatttttcaacacattctcttttattggttaaaattcacatgggtccgactaaatcatttgggtcccatataa 15134645  T
Q  156 attt 159  Q
    ||||    
T  15134646 attt 15134649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 33414050 - 33414003
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  33414050 catgtgaattttaaccaatcaaagagagtgtgttgaaaagtgtgtgtt 33414003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 41840640 - 41840593
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||    
T  41840640 catgtaaattttaatcaatcaaagagagtgtgttgaaaaatatgtgtt 41840593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 32286391 - 32286310
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||| ||||||||||| ||| |||||| |  |||||| |||||||  || |||||||||||||||||||||||| |||||||    
T  32286391 aatgctagcaacacacgtttcaacatatatttttcaacacactcttttttattggttaaaattcacatggatccaaccaaat 32286310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 3688723 - 3688663
Alignment:
Q  64 caacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatg 124  Q
    ||||||||||||||| |||||| || ||| ||||| || ||||||||||||||||||||||    
T  3688723 caacacacattttaatatacactttccaacacactttctttgattggttaaaattcacatg 3688663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 7403174 - 7403222
Alignment:
Q  148 tcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||| ||||||||||||||||||||||||||||||| | ||||||||    
T  7403174 tcatgtgaattttaaccaatcaaagagagtgtgttgaatagtgtgtgtt 7403222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 9023994 - 9024046
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||| |||||    
T  9023994 gtgggtcccatgtaaattttaacaaatcaaagagaatgtgttgaaaagtgtgt 9024046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 17181332 - 17181276
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||| |||||||||||||| | ||||||||||||| ||||||||||| |||||||    
T  17181332 ttgattagttaaaattcacataggtcccaccaaatcacgtgggtctcatataaattt 17181276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 15134614 - 15134567
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||||||    
T  15134614 catgtgaattttaaccaataaaagagaatgtgttgaaaaatgtgtgtt 15134567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 15134729 - 15134658
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatgg 125  Q
    |||||| || ||||||||||||||||  |||| |||||| ||||| ||  ||||||||||||||||||||||    
T  15134729 ggaatgctaacaacacacattttaacgcacacttttcaacacactgtctgtgattggttaaaattcacatgg 15134658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 16457967 - 16457920
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  16457967 catgtgaattttaaccaatcaaagagagtgtgttagaaaatgtgtgtt 16457920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 158
Target Start/End: Original strand, 9023901 - 9023991
Alignment:
Q  68 acacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaatt 158  Q
    |||||||||||||||||| ||| || ||||  |  |||||||| |||||||||||||  ||||| ||||||||||| ||| ||| ||||||    
T  9023901 acacattttaacatacactttttaacacacgttttttgattgggtaaaattcacatgagtcccaacaaatcatgtgagtcccatataaatt 9023991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 16577299 - 16577253
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  16577299 atgtaaattttaacaaatcaaacagaatgtgttgaaaaatgtgtgtt 16577253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 52375010 - 52375056
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  52375010 atgtgaattttaaccaatcaaaaagagtgtattgaaaaatgtgtgtt 52375056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 41840572 - 41840653
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||| |||||||| ||||||||||| | |  |||||| |||||||| ||||||| |||||||| |||||| | |||||||||    
T  41840572 aatgttagcaacatacattttaacacatatttttcaacacactctctttgattgattaaaatttacatgggttccaccaaat 41840653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 41840682 - 41840731
Alignment:
Q  147 ctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||| ||||||||||||||||| ||||||||||||| ||| ||||||    
T  41840682 ctcatgtgaattttaaccaatcaaatagagtgtgttgaacaatatgtgtt 41840731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 3688596 - 3688640
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||||| |||||||||||||||| || ||||||||||||||||||    
T  3688596 ttgattagttaaaattcacatgggtctcaccaaatcatgtgggtc 3688640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 42516598 - 42516494
Alignment:
Q  63 gcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattttaa 162  Q
    |||||||| ||||||||| |||| |||||| ||| |||| ||  |||||| ||||||||||   || ||| ||| ||||||||||  |||| ||||||||    
T  42516598 gcaacacatattttaacacacacttttcaacacattctctttatttggtttaaattcacataagtcacactaaaccatgtgggtcctatgtgaattttaa 42516499  T
Q  163 ccaat 167  Q
    |||||    
T  42516498 ccaat 42516494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 3688617 - 3688570
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| ||||||||| ||||||||| | ||||||||||||||||||||    
T  3688617 catgtgaattttaactaatcaaagaaaatgtgttgaaaaatgtgtgtt 3688570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 21433965 - 21434012
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| |||||||||||||||| |||||||||||||||| ||| ||||    
T  21433965 catgtgaattttaaccaatcaatgagagtgtgttgaaaagtgtatgtt 21434012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 25592335 - 25592252
Alignment:
Q  77 aacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaatttt 160  Q
    |||| |||| ||| || |||||||| || |||||||||||||||  | | |||||||||||||||||||||  || ||||||||    
T  25592335 aacacacactttttaatacactctctttcattggttaaaattcattttggtcccaccaaatcatgtgggtcctatataaatttt 25592252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 52374964 - 52374917
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| |||||||| | |||||||||||||||||||||| ||||||||    
T  52374964 catgtgaattttaatctatcaaagagagtgtgttgaaaagtgtgtgtt 52374917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 32286249 - 32286299
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgg 144  Q
    ||||||| |||||||  ||||||||||||||  ||||||||||||||||||    
T  32286249 acactcttattgattctttaaaattcacatgagtcccaccaaatcatgtgg 32286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 38036286 - 38036244
Alignment:
Q  147 ctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaat 189  Q
    ||||||| ||||||||||||||||||| | |||||||||||||    
T  38036286 ctcatgtgaattttaaccaatcaaagaaaatgtgttgaaaaat 38036244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 2247568 - 2247625
Alignment:
Q  65 aacacacattttaacatacacctttcaagacactctcattgattggttaaaattcaca 122  Q
    |||||| ||||||||| |||| |||||| |||||||| || |||| ||||||||||||    
T  2247568 aacacatattttaacacacacttttcaacacactctctttaattgattaaaattcaca 2247625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 2324807 - 2324762
Alignment:
Q  147 ctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtg 192  Q
    ||||||| ||||||||||||||||||||||| | ||||||| ||||    
T  2324807 ctcatgtgaattttaaccaatcaaagagagtatattgaaaagtgtg 2324762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 3688656 - 3688697
Alignment:
Q  142 tgggtctcatgtaaattttaaccaatcaaagagagtgtgttg 183  Q
    |||||| ||||| ||||||||||||||||||| |||||||||    
T  3688656 tgggtcacatgtgaattttaaccaatcaaagaaagtgtgttg 3688697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 17508806 - 17508765
Alignment:
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||  ||||||| ||||||||||||||||||||||||    
T  17508806 aattttaataaatcaaaaagagtgtgttgaaaaatgtgtgtt 17508765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 52820426 - 52820373
Alignment:
Q  106 attggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||| ||||||| || ||| ||| |||||||||| ||||||||||||||||    
T  52820426 attggttgaaattcaaatagattccatcaaatcatgtaggtctcatgtaaattt 52820373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 1338470 - 1338433
Alignment:
Q  157 ttttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  1338470 ttttaaccaatcaaagaga--gtgttgaaaaatgtgtgtt 1338433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 2247671 - 2247715
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    ||||| |||||||||||||||||||||||| |||| ||| |||||    
T  2247671 catgttaattttaaccaatcaaagagagtgggttggaaagtgtgt 2247715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 16577399 - 16577327
Alignment:
Q  68 acacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcat 140  Q
    |||||||||||||||||| ||| || | | |||  |||||||||||||| |||||||| | ||| ||||||||    
T  16577399 acacattttaacatacactttttaatatattctatttgattggttaaaactcacatgggttccaacaaatcat 16577327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 19382344 - 19382300
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    ||||| ||||||||||||||||| ||||||||||| ||| |||||    
T  19382344 catgtgaattttaaccaatcaaatagagtgtgttggaaagtgtgt 19382300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 31758771 - 31758819
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaat 189  Q
    |||||||||||   |||||||| |||||||||||| |||||||||||||    
T  31758771 gtgggtctcataagaattttaatcaatcaaagagaatgtgttgaaaaat 31758819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 32286323 - 32286363
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaat 189  Q
    ||||| ||||||||||||| ||| |||||||||||||||||    
T  32286323 catgtgaattttaaccaataaaaaagagtgtgttgaaaaat 32286363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 51578030 - 51578078
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtctcat 151  Q
    |||||| |||||||||||||||| ||||||||| || ||| ||||||||    
T  51578030 ttgatttgttaaaattcacatgggtcccaccaattcgtgtcggtctcat 51578078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 53127988 - 53128032
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||||||||||||| |||||||| |||||||| |||| |||||||    
T  53127988 ttgattggttaaaactcacatgggtcccaccatatcaagtgggtc 53128032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 55 - 196
Target Start/End: Original strand, 1473593 - 1473735
Alignment:
Q  55 gaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgt- 153  Q
    ||||| |||||||||||||||||| | |||  |||||| ||||| || ||||||||||||||||||||||| | ||||||||||||||||||| |||||     
T  1473593 gaatgctagcaacacacattttaatacacatttttcaacacactatctttgattggttaaaattcacatgggttccaccaaatcatgtgggtcccatgtg 1473692  T
Q  154 aaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    || |||||| |||||||||||||| ||||||||| ||||||||    
T  1473693 aatttttaaacaatcaaagagagtatgttgaaaagtgtgtgtt 1473735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 106 - 187
Target Start/End: Original strand, 28865439 - 28865520
Alignment:
Q  106 attggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaa 187  Q
    |||||||||||||||||||| ||||||||| ||||||||||| ||||| | |||||||||||||||||||| ||||||||||    
T  28865439 attggttaaaattcacatgggtcccaccaattcatgtgggtcccatgtgagttttaaccaatcaaagagagcgtgttgaaaa 28865520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 4483352 - 4483448
Alignment:
Q  61 tagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||| |||||||||||||||| ||||||  ||||||| |||||||||||||||| | | || ||||||||||||||||||| | ||| |||||||    
T  4483352 tagcaacatacattttaacatacacttttcaa--cactctctttgattggttaaaattaatacgggtcccaccaaatcatgtgggacccatataaattt 4483448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 11650899 - 11650971
Alignment:
Q  87 tttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||| || ||| | |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||    
T  11650899 tttcaagtcaatctaaatgattggttaaaattcacatggatcccaccaaattatgtgggtcccatataaattt 11650971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 191
Target Start/End: Original strand, 19711617 - 19711752
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaa 155  Q
    ||||||||||||||||||||||||| | |  |||||| | ||||   || |||| |||||||| | |||| |||||| ||||| |||||||| |||||||    
T  19711617 aatggtagcaacacacattttaacacatatttttcaatatactcgttttaattgattaaaatttatatgggtcccactaaatcgtgtgggtcccatgtaa 19711716  T
Q  156 attttaaccaatcaaagagagtgtgttgaaaaatgt 191  Q
    ||||| ||||||   |||||||||||| ||| ||||    
T  19711717 atttttaccaattgtagagagtgtgttaaaatatgt 19711752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 4033144 - 4033086
Alignment:
Q  64 caacacacattttaacatacacctttcaagacactctcattgattggttaaaattcaca 122  Q
    ||||||||||||||||| |||| |||||| ||||| || ||||||||||||||||||||    
T  4033144 caacacacattttaacacacacttttcaatacactatctttgattggttaaaattcaca 4033086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 5706647 - 5706701
Alignment:
Q  106 attggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaatttt 160  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||| | ||||||    
T  5706647 attggttaaaattcatatggatcccaccaaatcatgtgcgtctcatatcaatttt 5706701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 5706704 - 5706758
Alignment:
Q  142 tgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||| |||||||||||||| |||||||||||||||||||||||| | ||||||    
T  5706704 tgggtcccatgtaaattttaatcaatcaaagagagtgtgttgaaaagtatgtgtt 5706758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 12731647 - 12731693
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  12731647 atgtaaattttaaccaatcaaaaagagtgtgttggaaaatgtgtgtt 12731693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 24783955 - 24784005
Alignment:
Q  146 tctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||||||||    
T  24783955 tctcatgtaaattttaatcaatcaaagatagtgtgttaaaaaatgtgtgtt 24784005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 479782 - 479863
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||| |||||||||| ||||||| | |||  |||||| ||||| |  ||||||||||||||||||||| |||||||||||||    
T  479782 aatgctagcaacacaaattttaataaacatttttcaaaacactttatttgattggttaaaattcacattgatcccaccaaat 479863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 5706779 - 5706710
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatgg 125  Q
    |||| |||||||||||||||||||| | || |||||| |||||||| ||||||| |||||||| ||||||    
T  5706779 aatgatagcaacacacattttaacacatacttttcaacacactctctttgattgattaaaatttacatgg 5706710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 147
Target Start/End: Complemental strand, 12731716 - 12731623
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||||| |||||||||| ||| ||||| |||  || ||| |||||||  |||||||||||||||| |||| | | |||||||||||||||||||    
T  12731716 ggaatgctagcaacacatattataacacacattttccaacacactctttttgattggttaaaatttacatagcttccaccaaatcatgtgggtc 12731623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 160
Target Start/End: Complemental strand, 31989295 - 31989190
Alignment:
Q  55 gaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgta 154  Q
    ||||| ||| || ||||||||||||  |||| |||||| | | |||| |||||| ||||||||  |||||||||||| |||||||||||||||  || ||    
T  31989295 gaatgctagtaaaacacattttaaccaacacttttcaatatattctctttgatttgttaaaatatacatggatcccaacaaatcatgtgggtccaatata 31989196  T
Q  155 aatttt 160  Q
    ||||||    
T  31989195 aatttt 31989190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 1473662 - 1473618
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||    
T  1473662 catgtgaattttaaccaatcaaagatagtgtgttgaaaaatgtgt 1473618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 6643428 - 6643372
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||||||||||||| || | ||||||||||||||||||||| ||| |||||||    
T  6643428 ttgattggttaaaattcatataggtcccaccaaatcatgtgggtcccatataaattt 6643372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 24110104 - 24110068
Alignment:
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgt 191  Q
    |||||||||||||||||||||||||||||||||||||    
T  24110104 aattttaaccaatcaaagagagtgtgttgaaaaatgt 24110068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 12731608 - 12731557
Alignment:
Q  142 tgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    |||||||||||| ||||||||||||||||||||| |||||||| || |||||    
T  12731608 tgggtctcatgtgaattttaaccaatcaaagagaatgtgttgagaagtgtgt 12731557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 3150238 - 3150276
Alignment:
Q  106 attggttaaaattcacatggatcccaccaaatcatgtgg 144  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  3150238 attggttaaaattcacatgggtcccaccaaatcatgtgg 3150276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 4494435 - 4494397
Alignment:
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  4494435 aattttaaccaatcaaagaaagtgtgttgaaaaatgtgt 4494397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 17390057 - 17389991
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcaca 122  Q
    |||| ||||||||||||||||||||  ||  |||||| || ||||| ||||||||||||||||||||    
T  17390057 aatgctagcaacacacattttaacacgcaattttcaacactctctctttgattggttaaaattcaca 17389991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 24783892 - 24783933
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgg 144  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  24783892 ttgattcgttaaaattcatatggatcccaccaaatcatgtgg 24783933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 11650973 - 11651029
Alignment:
Q  141 gtgggtctcatgtaaattttaa-ccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||| |||||||||||||| ||||||||||||| | |||||||||||| |||||    
T  11650973 gtgggtcccatgtaaattttaagccaatcaaagagattatgttgaaaaatgcgtgtt 11651029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 24110042 - 24110106
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattca 120  Q
    |||| |||||||||| ||| ||| |||||  |||||| |||||||| ||||||||||||||||||    
T  24110042 aatgctagcaacacatattctaaaatacatttttcaacacactctctttgattggttaaaattca 24110106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 4787872 - 4787809
Alignment:
Q  61 tagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatg 124  Q
    ||||||||||||||||||||||||  ||| || |  ||||| |||||||||||||| |||||||    
T  4787872 tagcaacacacattttaacatacattttttaacagtctctctttgattggttaaaactcacatg 4787809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 4033030 - 4032992
Alignment:
Q  153 taaattttaaccaatcaaagagagtgtgttgaaaaatgt 191  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  4033030 taaatttcaaccaattaaagagagtgtgttgaaaaatgt 4032992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 17600694 - 17600744
Alignment:
Q  146 tctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||| | ||||||||||||||||||| | ||||||||||||| ||||    
T  17600694 tctcatgtgagttttaaccaatcaaagagaatatgttgaaaaatgtttgtt 17600744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 17600767 - 17600697
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatg 124  Q
    |||||| || ||||||||||||||||| |||  |||||| | | |||| |||||||||||||| |||||||    
T  17600767 ggaatgttaacaacacacattttaacaaacatttttcaacatattctctttgattggttaaaactcacatg 17600697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 4033090 - 4033131
Alignment:
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||    
T  4033090 aattttaaccaatcaaagatagtgtattgaaaagtgtgtgtt 4033131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 123
Target Start/End: Original strand, 6643332 - 6643361
Alignment:
Q  94 acactctcattgattggttaaaattcacat 123  Q
    ||||||||||||||||||||||||||||||    
T  6643332 acactctcattgattggttaaaattcacat 6643361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 12425014 - 12424939
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatccca 131  Q
    |||||| || |||||||||||||||| ||||  |||||| ||| |||| |||||||||||| |||||||||| |||||    
T  12425014 ggaatgctaacaacacacattttaacctacat-tttcaacacattctc-ttgattggttaacattcacatgggtccca 12424939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 17389995 - 17390036
Alignment:
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||||||||||||||||| |||||||||| || |||||    
T  17389995 aattttaaccaatcaaagagagagtgttgaaaattgcgtgtt 17390036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 3625135 - 3625183
Alignment:
Q  95 cactctcattgattggttaaaattcacatggatcccaccaaatcatgtg 143  Q
    ||||||| ||||||  ||||||||||||||  |||||||||||||||||    
T  3625135 cactctctttgattaattaaaattcacatgagtcccaccaaatcatgtg 3625183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 12731533 - 12731601
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatg 124  Q
    |||| |||||||||| ||| ||| | |||| | |||| ||| |||| ||||||||||||||||||||||    
T  12731533 aatgttagcaacacatattctaatacacacttctcaacacattctctttgattggttaaaattcacatg 12731601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 31054684 - 31054736
Alignment:
Q  107 ttggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||||||||||||||  || ||| |||| ||||||||||||| |||||||    
T  31054684 ttggttaaaattcacatgcgtcacactaaattatgtgggtctcatataaattt 31054736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 34093904 - 34093948
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    ||||| ||||||||||||||||||||| | ||||||||| |||||    
T  34093904 catgtgaattttaaccaatcaaagagattatgttgaaaagtgtgt 34093948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 2e-29; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 42094364 - 42094260
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgt 153  Q
    |||||| |||||||||||||||||||| |||| |||||| |||| ||| ||||||||||||||||||||||| ||||||||||||||||||||| ||| |    
T  42094364 ggaatgctagcaacacacattttaacacacacttttcaacacacactctttgattggttaaaattcacatgg-tcccaccaaatcatgtgggtcccatat 42094266  T
Q  154 aaattt 159  Q
    ||||||    
T  42094265 aaattt 42094260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 25666958 - 25666855
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaa 155  Q
    |||| ||||||||||||||||||||||||  |||||| |||||||| |||||  |||||||| |||||||||||||||||||||||| |||  ||| |||    
T  25666958 aatgctagcaacacacattttaacatacaattttcaacacactctctttgatgtgttaaaatccacatggatcccaccaaatcatgtaggttccatataa 25666859  T
Q  156 attt 159  Q
    ||||    
T  25666858 attt 25666855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 25666853 - 25666798
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  25666853 gtgggtctcatgtgaattttaatcaatcaaatagagtgtgttgaaaaatgtgtgtt 25666798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 18719710 - 18719813
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgt 153  Q
    |||||| |||||||||||||| |||||  ||  |||||| |||||||  |||||||||||||||||||| |  | ||||||||||||||||||| ||| |    
T  18719710 ggaatgctagcaacacacattctaaca--catttttcaacacactctttttgattggttaaaattcacacgagttccaccaaatcatgtgggtcccatat 18719807  T
Q  154 aaattt 159  Q
    ||||||    
T  18719808 aaattt 18719813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 1469849 - 1469796
Alignment:
Q  106 attggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||| |||||||    
T  1469849 attggttaaaattcacatggatcccacaaaatcatgtgggtcccatataaattt 1469796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 147
Target Start/End: Complemental strand, 3466549 - 3466456
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||||| |||||||||||||||||||| |||| ||  || | | |||| ||||||||||||||||||||||| | |||| ||||| ||||||||    
T  3466549 ggaatgctagcaacacacattttaacacacactttcaaacatagtctctttgattggttaaaattcacatgggttccactaaatcgtgtgggtc 3466456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 15194519 - 15194595
Alignment:
Q  61 tagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||||||||| |||||||||||||| |||||  |||||||  |||||||||||||| |||||||| || ||||||||    
T  15194519 tagcaacacaaattttaacatacacttttcagcacactctttttgattggttaaaagtcacatgggtcgcaccaaat 15194595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 35715127 - 35715053
Alignment:
Q  62 agcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaa 136  Q
    ||||||||||||||||| | |||| |||||| |||||||| |||||||||||||||| |||| | ||||| ||||    
T  35715127 agcaacacacattttaagacacacttttcaatacactctctttgattggttaaaatttacataggtcccatcaaa 35715053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 23001471 - 23001430
Alignment:
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  23001471 aattttaaccaatcaaagagagtatgttgaaaaatgtgtgtt 23001430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 37810125 - 37810206
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    ||||||||||| | ||||||||||  | || |||||| |||||||| ||||||||||| |||||||||||  ||||||||||    
T  37810125 aatggtagcaaaatacattttaactcatacttttcaacacactctctttgattggttataattcacatgggacccaccaaat 37810206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 12703455 - 12703519
Alignment:
Q  60 gtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatg 124  Q
    ||||||||||||||||||||| |||  |||||| ||||| || |||||||||||| |||||||||    
T  12703455 gtagcaacacacattttaacacacatttttcaatacactttctttgattggttaatattcacatg 12703519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 3466442 - 3466388
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||| |||||||||||||||||||||| ||||| |||||| ||||||    
T  3466442 gtgggtctcatgtgaattttaaccaatcaaagagag-gtgttaaaaaatatgtgtt 3466388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 33171733 - 33171678
Alignment:
Q  82 acacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||| |||||| |||||||| ||||||||||||| ||||||||| |||||||||||    
T  33171733 acacttttcaacacactctctttgattggttaaatttcacatgggtcccaccaaat 33171678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 35715066 - 35715109
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    |||||||||||||||||||||||||||||| ||||||| |||||    
T  35715066 atgtaaattttaaccaatcaaagagagtgtattgaaaagtgtgt 35715109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 41496038 - 41496105
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacat 123  Q
    ||||||| ||||| | ||||||||| |||| |||||| ||||| || |||||||||||||||||||||    
T  41496038 aatggtaacaacatatattttaacacacacttttcaatacactatctttgattggttaaaattcacat 41496105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 42029426 - 42029481
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||| ||||||||||||| ||| | ||||||||||||| ||||||||    
T  42029426 gtgggtctcatgtgaattttaaccaataaaaaaaagtgtgttgaaaagtgtgtgtt 42029481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 42094294 - 42094341
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||||||    
T  42094294 catgtgaattttaaccaatcaaagagtgtgtgttgaaaagtgtgtgtt 42094341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 42251255 - 42251302
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  42251255 catgtgaattttaatcaatcaaagagagtgtgttgaaaagtgtgtgtt 42251302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 1930716 - 1930670
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  1930716 atgtgaattttaaccaatcaaaaagagtgtcttgaaaaatgtgtgtt 1930670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 2683515 - 2683445
Alignment:
Q  77 aacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||| |||| ||||| ||||||||  |||||||||||||||| | |||| | |||||||||||||||||||    
T  2683515 aacacacacttttcacgacactctttttgattggttaaaatttatatgggttccaccaaatcatgtgggtc 2683445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 18719772 - 18719734
Alignment:
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  18719772 aattttaaccaatcaaaaagagtgtgttgaaaaatgtgt 18719734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 37810201 - 37810155
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaa 187  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||||    
T  37810201 gtgggtcccatgtgaattataaccaatcaaagagagtgtgttgaaaa 37810155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 12703521 - 12703472
Alignment:
Q  147 ctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||| ||| ||||||||||||||| ||||| ||||||||||||||||    
T  12703521 ctcatgtgaatattaaccaatcaaagaaagtgtattgaaaaatgtgtgtt 12703472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 16209424 - 16209375
Alignment:
Q  147 ctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||| ||||||||||||| ||||||||||||||| ||| ||||||||    
T  16209424 ctcatgtgaattttaaccaattaaagagagtgtgttggaaagtgtgtgtt 16209375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 33069222 - 33069169
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtg 194  Q
    |||||||| |||| |||||||||| |||||||| ||||||||||||| ||||||    
T  33069222 gtgggtctaatgtgaattttaaccgatcaaagaaagtgtgttgaaaagtgtgtg 33069169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 33171691 - 33171736
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtg 194  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||    
T  33171691 catgtgaaatttaaccaatcaaagagagtgtgttgaaaagtgtgtg 33171736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 37810268 - 37810203
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||| | ||||||||||||||||||||||| ||||||||||| |  |||||| ||| |||||||    
T  37810268 acactcactttgattggttaaaattcacatgggtcccaccaaattagatgggtcccatataaattt 37810203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 42251204 - 42251163
Alignment:
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||||| |||||||||||||||| ||||||||||||||    
T  42251204 aattttaaccgatcaaagagagtgtgtcgaaaaatgtgtgtt 42251163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 45300501 - 45300436
Alignment:
Q  82 acacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||| |||||| |||||||  ||||||||||||||||||||||||| ||| ||||| || ||||||    
T  45300501 acacttttcaatacactctttttgattggttaaaattcacatggattccatcaaattatatgggtc 45300436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 1930680 - 1930752
Alignment:
Q  87 tttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||||||||||  |||||||||||||||||||||   | ||| ||||| ||||||||| ||| |||||||    
T  1930680 tttcaagacactctttttgattggttaaaattcacatatgttccatcaaattatgtgggtcccatataaattt 1930752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 4237363 - 4237319
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||||| |||||||||||||||| | |||||||||||||||||||    
T  4237363 ttgattagttaaaattcacatgggtaccaccaaatcatgtgggtc 4237319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 45300407 - 45300367
Alignment:
Q  156 attttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  45300407 attttaaccaatcaaaaggagtgtgttgaaaaatgtgtgtt 45300367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 1469786 - 1469739
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| ||||||||||||| ||| ||||||||||||||||| ||||||    
T  1469786 catgtgaattttaaccaattaaatagagtgtgttgaaaaatatgtgtt 1469739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 18719816 - 18719854
Alignment:
Q  142 tgggtctcatgtaaattttaaccaatcaaagagagtgtgt 181  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  18719816 tgggtctcatgtaaattt-aaccaatcaaagagagtgtgt 18719854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 33069146 - 33069213
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacat 123  Q
    |||| |||||||||||||| || || |||| |||||| ||||| || ||||| |||||||||||||||    
T  33069146 aatgttagcaacacacattctatcacacacttttcaacacactttctttgatcggttaaaattcacat 33069213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 33171609 - 33171664
Alignment:
Q  87 tttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgt 142  Q
    |||||| ||||| || ||||||| |||||||||| |||| ||||||||||||||||    
T  33171609 tttcaacacactttctttgattgtttaaaattcatatgggtcccaccaaatcatgt 33171664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 42251180 - 42251231
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtggg 145  Q
    |||||||| ||||| ||||||||||| ||||| ||||||||||| |||||||    
T  42251180 acactctctttgatcggttaaaattcgcatgggtcccaccaaattatgtggg 42251231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 44247585 - 44247538
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| ||||| ||||||||||||| ||| ||||||||||||||||||    
T  44247585 catgtgaatttcaaccaatcaaagatagtttgttgaaaaatgtgtgtt 44247538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 12779480 - 12779549
Alignment:
Q  55 gaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatgg 125  Q
    ||||| ||||||||||| || |||||||||  |||||| ||| |||  |||||||||||||||||||||||    
T  12779480 gaatgctagcaacacaccttctaacatacatttttcaacacattctt-ttgattggttaaaattcacatgg 12779549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 183
Target Start/End: Complemental strand, 35715021 - 35714987
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttg 183  Q
    |||||||||||||||||| ||||||||||||||||    
T  35715021 catgtaaattttaaccaaacaaagagagtgtgttg 35714987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 41496105 - 41496059
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||| ||||||||||||||||||| ||||| ||||||| ||||||||    
T  41496105 atgtgaattttaaccaatcaaagatagtgtattgaaaagtgtgtgtt 41496059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 44247630 - 44247664
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttg 183  Q
    ||||| |||||||||||||||||||||||||||||    
T  44247630 catgtgaattttaaccaatcaaagagagtgtgttg 44247664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 1469730 - 1469799
Alignment:
Q  68 acacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    ||||||||||||| | |  |||||| |||||||  || |||||||||||||||||||||  |||||||||    
T  1469730 acacattttaacacatatttttcaacacactctatttaattggttaaaattcacatggaatccaccaaat 1469799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 2683472 - 2683521
Alignment:
Q  153 taaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtttgatgt 202  Q
    ||||||||||||||||||| |||||||  |||||| ||||||||| ||||    
T  2683472 taaattttaaccaatcaaaaagagtgtcgtgaaaagtgtgtgttttatgt 2683521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 16209535 - 16209454
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||| |||||||||| ||| |||||||||| ||||||  || |||| |||||  ||||||||||| ||| | ||||||||||    
T  16209535 aatgctagcaacacatattctaacatacacttttcaacgcattctctttgatcagttaaaattcaaatgaaacccaccaaat 16209454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 33069296 - 33069227
Alignment:
Q  87 tttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaa 156  Q
    |||||| |||||||  |||||||||||||| |||| ||| |||||| |||| ||||||||| ||| ||||    
T  33069296 tttcaacacactctttttgattggttaaaaatcacttgggtcccactaaattatgtgggtcccatataaa 33069227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 36592163 - 36592224
Alignment:
Q  110 gttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattttaaccaatcaaa 171  Q
    |||||||||||||||||||| |  |||| || || ||||||| | |||||||||||||||||    
T  36592163 gttaaaattcacatggatcctataaaattatatgagtctcatatgaattttaaccaatcaaa 36592224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 42029383 - 42029342
Alignment:
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||| ||||||| | ||||||||||||||||||||||    
T  42029383 aattttaacaaatcaaatacagtgtgttgaaaaatgtgtgtt 42029342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 8543660 - 8543596
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaatt 158  Q
    |||||||| || ||| ||||||||||| ||||||| ||  ||| ||| |||||||||||||||||    
T  8543660 acactctcttttattagttaaaattcatatggatctcataaaaacatatgggtctcatgtaaatt 8543596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 9430288 - 9430216
Alignment:
Q  65 aacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||||||||| ||||| |||| |||||| | | |||  |||||||||||||||||||||| | |||| |||||    
T  9430288 aacacacattctaacacacacttttcaacatattctatttgattggttaaaattcacatgaaccccatcaaat 9430216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 9430228 - 9430276
Alignment:
Q  148 tcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||| ||||||||||||||||| ||| | ||||||||| ||||||||    
T  9430228 tcatgtgaattttaaccaatcaaatagaatatgttgaaaagtgtgtgtt 9430276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 42251302 - 42251254
Alignment:
Q  77 aacatacacctttcaagacactctcattgattggttaaaattcacatgg 125  Q
    |||| |||| |||||| |||||||| ||||||| |||||||||||||||    
T  42251302 aacacacacttttcaacacactctctttgattgattaaaattcacatgg 42251254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 44247564 - 44247608
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||||||||| |||||||||||| | ||||||||| |||||||||    
T  44247564 ttgattggttgaaattcacatgggttccaccaaattatgtgggtc 44247608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 45300459 - 45300503
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    ||||| ||||||||||||||||| ||||||| ||||||| |||||    
T  45300459 catgtgaattttaaccaatcaaaaagagtgtattgaaaagtgtgt 45300503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 26986271 - 26986406
Alignment:
Q  55 gaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgta 154  Q
    ||||| |||||||||| ||||||||||| || |||||| ||| |||| |||||| |||||||||||||||| ||| | ||||| || ||||||||||||     
T  26986271 gaatgttagcaacacatattttaacatatacttttcaacacattctccttgattagttaaaattcacatgggtcctatcaaattatatgggtctcatgtg 26986370  T
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgt 191  Q
    || |||||  |||||||||||||||||||||||||||    
T  26986371 aa-tttaattaatcaaagagagtgtgttgaaaaatgt 26986406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 36480869 - 36480764
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgt 153  Q
    |||||| |||||||||||||||||||| |||| |||||| |  ||||| |||||||| |||||||||||||| ||||||||||||||||||||| ||| |    
T  36480869 ggaatgctagcaacacacattttaacacacacttttcaacattctctctttgattggctaaaattcacatgggtcccaccaaatcatgtgggtcccatat 36480770  T
Q  154 aaattt 159  Q
    ||||||    
T  36480769 aaattt 36480764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 3901635 - 3901566
Alignment:
Q  74 tttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtg 143  Q
    ||||||| |||| |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  3901635 tttaacacacacttttcaacacactctctttgattggttaaaattcacatgggtcccaccaaatcatgtg 3901566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 3901509 - 3901632
Alignment:
Q  87 tttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcat--------------gtgggtctcatgtaaattttaaccaatcaaag 172  Q
    |||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||              ||||| | ||||| ||||||||||||||||||    
T  3901509 tttcaacacattctctttgattggttaaaattcacatgggtcccaccaaatcatgtgcacatgatttggtgggacccatgtgaattttaaccaatcaaag 3901608  T
Q  173 agagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||| ||||||||    
T  3901609 agagtgtgttgaaaagtgtgtgtt 3901632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 1458620 - 1458540
Alignment:
Q  114 aaattcacatggatcccaccaaatcatgtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| |||||| | ||||||||||||||||||||||| | ||||| ||||||||||  ||||||||||||||| ||||||||    
T  1458620 aaatttacatgggttccaccaaatcatgtgggtctcatatgaatttcaaccaatcaa--agagtgtgttgaaaattgtgtgtt 1458540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 159
Target Start/End: Original strand, 32880985 - 32881079
Alignment:
Q  65 aacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||||||||| || |||  |||||| | |||||| |||||||||||| |||||||||| |||||| ||||||||||| || ||| |||||||    
T  32880985 aacacacattttatcacacatttttcaacatactctccttgattggttaatattcacatgggtcccacaaaatcatgtggatcccatataaattt 32881079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 11532557 - 11532492
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||| ||||||||||||||||||||||| | |||||||||||||||| || ||| |||||||    
T  11532557 acactctctttgattggttaaaattcacatgggttccaccaaatcatgtggatcccatataaattt 11532492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 19560606 - 19560699
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||||| || ||||| ||||| ||||  |||| |||||| |||||| | |||||||||| ||||||| |||| |||||||||||||||||||||    
T  19560606 ggaatgctaacaacatacattctaacgcacacttttcaatacactcgctttgattggttgaaattcatatgggtcccaccaaatcatgtgggtc 19560699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 196
Target Start/End: Complemental strand, 799380 - 799260
Alignment:
Q  77 aacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatc-atgtgggtctcatgtaaattttaaccaatcaaagaga 175  Q
    |||| |||| |||||| ||  |||| |||||||||||||||| |||| | ||||||| |||  || |||| | ||||| ||||| ||||||| |||||||    
T  799380 aacacacacttttcaatactttctctttgattggttaaaattgacataggtcccacctaatttatatgggacccatgtgaatttaaaccaattaaagaga 799281  T
Q  176 gtgtgttgaaaaatgtgtgtt 196  Q
    | |||||||||||||||||||    
T  799280 gcgtgttgaaaaatgtgtgtt 799260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 14345206 - 14345151
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||||| ||||||    
T  14345206 gtgggtctcatgtggattttaaccaatcaaagaaagtgtgttgaaaaatatgtgtt 14345151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 196
Target Start/End: Original strand, 19560729 - 19560768
Alignment:
Q  157 ttttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19560729 ttttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 19560768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 31205416 - 31205369
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  31205416 catgtaaattttaaccaatcaaagagagtgtgttggaaaatatgtgtt 31205369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 32881081 - 32881136
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  32881081 gtgggtctcgtgtaaattttaaccaataaaaaagattgtgttgaaaaatgtgtgtt 32881136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 147
Target Start/End: Original strand, 29955022 - 29955108
Alignment:
Q  61 tagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||||||| | ||||||| | | || |||||| ||||| |  ||||||||||||||||||||||| ||||| |||||||||||||||    
T  29955022 tagcaacatatattttaatacatacttttcaacacactttttttgattggttaaaattcacatgggtcccatcaaatcatgtgggtc 29955108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 147
Target Start/End: Original strand, 30004176 - 30004262
Alignment:
Q  61 tagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||||||| | ||||||| | | || |||||| ||||| |  ||||||||||||||||||||||| ||||| |||||||||||||||    
T  30004176 tagcaacatatattttaatacatacttttcaacacactttttttgattggttaaaattcacatgggtcccatcaaatcatgtgggtc 30004262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 44890430 - 44890476
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  44890430 atgtaaattttaaccaatcaaaaagagtgtgttgaaaaatgtatgtt 44890476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 14345257 - 14345208
Alignment:
Q  110 gttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||||||||||| |||||||||||||||||||||| ||| |||||||    
T  14345257 gttaaaattcacatgaatcccaccaaatcatgtgggtcccatataaattt 14345208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 156
Target Start/End: Original strand, 31205347 - 31205448
Alignment:
Q  55 gaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgta 154  Q
    ||||| || |||||||| |||||||| | |  || ||| |||||||| |||||||||||||||| |||||| ||  ||||||||||||||||| ||| ||    
T  31205347 gaatgctaacaacacacgttttaacacatattttccaacacactctctttgattggttaaaatttacatgggtcttaccaaatcatgtgggtcccatata 31205446  T
Q  155 aa 156  Q
    ||    
T  31205447 aa 31205448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 35357439 - 35357374
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||| ||||||||||||||||||||||| ||| ||||||||||||  ||| ||| |||||||    
T  35357439 acactctctttgattggttaaaattcacatgggtcctaccaaatcatgtaagtcccatataaattt 35357374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 35527163 - 35527126
Alignment:
Q  110 gttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35527163 gttaaaattcacatggatcccaccaaatcatgtgggtc 35527126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 36007516 - 36007447
Alignment:
Q  55 gaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatg 124  Q
    ||||| ||||||||||||||||||||| ||| |||||| ||| | || |||| |||||||||||||||||    
T  36007516 gaatgttagcaacacacattttaacattcacttttcaacacattttctttgagtggttaaaattcacatg 36007447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 36480694 - 36480755
Alignment:
Q  64 caacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatgg 125  Q
    ||||||||||||||||| || | || ||| |||||||| |||||||||||||||||||||||    
T  36480694 caacacacattttaacacaccctttccaacacactctctttgattggttaaaattcacatgg 36480755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 37189299 - 37189222
Alignment:
Q  61 tagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatc 138  Q
    |||||||||||||||||| |||||  ||| || | |||||| |||||||||||||||||||||| || |||| |||||    
T  37189299 tagcaacacacattttaatatacattttttaacagactctctttgattggttaaaattcacatgaattccactaaatc 37189222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 145
Target Start/End: Complemental strand, 36026952 - 36026863
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtggg 145  Q
    |||||| || |||||||||||||||||  ||| |||||| |||||||  ||||| |||||||||||| || ||||||  |||||||||||||    
T  36026952 ggaatgttaacaacacacattttaacactcacttttcaatacactct--ttgatcggttaaaattcatatagatccccacaaatcatgtggg 36026863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 37341250 - 37341305
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||| |||||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  37341250 ttgattagttaaaattcacatgggtcc-accaaatcatgtgggtctcatataaattt 37341305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 3901546 - 3901499
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  3901546 catgtgaattttaaccaatcaaagagaatgtgttgaaaaatatgtgtt 3901499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 31205453 - 31205495
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttg 183  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  31205453 gtgggtctcatgtgaattttgaccaatcaaagagagtgtgttg 31205495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 16993425 - 16993339
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgg 144  Q
    |||| ||| |||||||||| ||| |||||| || ||| |||||||  || ||||||||| | ||| |||||||||||||||||||||||    
T  16993425 aatgctagtaacacacattctaatatacactttccaacacactct--ttaattggttaacagtcatatggatcccaccaaatcatgtgg 16993339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 40554128 - 40554177
Alignment:
Q  147 ctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||| | ||||||||||||||||||||||| ||||||| ||||||||    
T  40554128 ctcatgtgagttttaaccaatcaaagagagtgtattgaaaattgtgtgtt 40554177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 147
Target Start/End: Complemental strand, 51541399 - 51541314
Alignment:
Q  62 agcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||||||||| || ||||| | |  |||||| ||||| |  |||||||||||||||||| |||  |||||||||||||||||||||    
T  51541399 agcaacacaccttctaacacatatttttcaatacactttttttgattggttaaaattcagatgagtcccaccaaatcatgtgggtc 51541314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 4304795 - 4304831
Alignment:
Q  111 ttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||||||||||||||||||||||||||||| ||||||    
T  4304795 ttaaaattcacatggatcccaccaaatcatttgggtc 4304831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 19158685 - 19158741
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||||||||||||||||||  |||||| |||| |||||||| |||| |||||||    
T  19158685 ttgattggttaaaattcacatgagtcccactaaattatgtgggtttcatataaattt 19158741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 35357296 - 35357364
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatg 124  Q
    |||| |||||||||||||| ||||| | |  |||||| |||||||| |||||||||||||| |||||||    
T  35357296 aatgctagcaacacacattctaacaaatatttttcaacacactctctttgattggttaaaactcacatg 35357364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 189
Target Start/End: Complemental strand, 35357356 - 35357324
Alignment:
Q  157 ttttaaccaatcaaagagagtgtgttgaaaaat 189  Q
    |||||||||||||||||||||||||||||||||    
T  35357356 ttttaaccaatcaaagagagtgtgttgaaaaat 35357324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 4277075 - 4277118
Alignment:
Q  153 taaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| |||| |||||||||| ||||||||||||||||||||||    
T  4277075 taaatattaatcaatcaaagaaagtgtgttgaaaaatgtgtgtt 4277118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 11532527 - 11532574
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| ||||||||||||||||||||||||||||  ||| ||||||||    
T  11532527 catgtgaattttaaccaatcaaagagagtgtgttagaaagtgtgtgtt 11532574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 31524116 - 31524070
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||||||||||||| | |||||| |||||||||||||    
T  31524116 catgtaaattttaaccaatcaaagaaaatgtgtt-aaaaatgtgtgtt 31524070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 35414986 - 35415029
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||||||||||||||| ||||||||||||||| || ||||||||    
T  35414986 acactctcattgattgattaaaattcacatgggtctcaccaaat 35415029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 37189235 - 37189278
Alignment:
Q  148 tcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgt 191  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||    
T  37189235 tcatgtgaattttaaccaatcaaagagagtctgttaaaaaatgt 37189278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 40554025 - 40554104
Alignment:
Q  61 tagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtg 143  Q
    ||||||||||||||||||||  ||| ||| || | |||||| |  |||| ||||||||||||||| |||||||||||||||||    
T  40554025 tagcaacacacattttaaca--cactttttaaaa-actctcttcaattgattaaaattcacatgggtcccaccaaatcatgtg 40554104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 46492591 - 46492638
Alignment:
Q  98 tctcattgattggttaaaattcacatggatcccaccaaatcatgtggg 145  Q
    |||| ||||||| ||||||||||||| ||||||||||||| |||||||    
T  46492591 tctctttgattgattaaaattcacatagatcccaccaaattatgtggg 46492638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 1458698 - 1458628
Alignment:
Q  55 gaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatgg 125  Q
    ||||| || ||||||||||| ||||| |||| |||||| |||||||  |||||||||| ||||||| ||||    
T  1458698 gaatgctaacaacacacattctaacaaacacttttcaacacactcttcttgattggtttaaattcatatgg 1458628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 1753313 - 1753399
Alignment:
Q  74 tttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaatttt 160  Q
    |||||||||||| |||||| | |||||  |||||||||||||||| |||||  |  || |||||||||||| || ||| ||||||||    
T  1753313 tttaacatacacttttcaatatactctttttgattggttaaaatttacatgagtttcatcaaatcatgtggttcccatataaatttt 1753399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 32881053 - 32880999
Alignment:
Q  140 tgtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtg 194  Q
    |||||| | ||||| ||| |||||||||||| |||||| ||||||||||||||||    
T  32881053 tgtgggacccatgtgaatattaaccaatcaaggagagtatgttgaaaaatgtgtg 32880999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 1753365 - 1753316
Alignment:
Q  147 ctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||||||||||||| ||||| | ||||||| ||| ||||    
T  1753365 ctcatgtaaattttaaccaatcaaaaagagtatattgaaaagtgtatgtt 1753316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 13540193 - 13540242
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtg 143  Q
    |||||||| |||||||||| ||| | |||||| |||||||||||||||||    
T  13540193 acactctctttgattggtttaaactaacatggctcccaccaaatcatgtg 13540242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 14345130 - 14345211
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||| |||||||||| ||||||||| | |  |||||| ||||| || ||||||||||||||| ||||||   ||||||||||    
T  14345130 aatgttagcaacacatattttaacacatatttttcaacacactttctttgattggttaaaatccacatgagacccaccaaat 14345211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 46555590 - 46555631
Alignment:
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||| ||||||||||||||||||| |||| ||||||||    
T  46555590 aattttaatcaatcaaagagagtgtgttaaaaagtgtgtgtt 46555631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 35357409 - 35357441
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgt 181  Q
    ||||| |||||||||||||||||||||||||||    
T  35357409 catgtgaattttaaccaatcaaagagagtgtgt 35357441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 49750649 - 49750609
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaat 189  Q
    ||||| |||||||| |||||||||||| |||||||||||||    
T  49750649 catgtgaattttaatcaatcaaagagaatgtgttgaaaaat 49750609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 49750612 - 49750668
Alignment:
Q  87 tttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtg 143  Q
    |||||| ||| |||| ||||||| ||||||||||||||||| |||| ||||| ||||    
T  49750612 tttcaacacattctctttgattgattaaaattcacatggattccactaaatcgtgtg 49750668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 42072641 - 42072742
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaa 155  Q
    |||| ||||||| |||||||||||| ||||  ||||| |||||||| |||||||||||| |||||||||| |||||||||||||| |||||||||| |||    
T  42072641 aatgctagcaacgcacattttaacacacac--ttcaacacactctctttgattggttaacattcacatgggtcccaccaaatcatatgggtctcatataa 42072738  T
Q  156 attt 159  Q
    ||||    
T  42072739 attt 42072742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 40694768 - 40694682
Alignment:
Q  61 tagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    ||||||||||| |||||||| |||| |||||| |||||||  || ||| |||||||||||||||| |||||||||||||||||||||    
T  40694768 tagcaacacacgttttaacacacacttttcaatacactcttttttattagttaaaattcacatgggtcccaccaaatcatgtgggtc 40694682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 40566617 - 40566481
Alignment:
Q  55 gaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgta 154  Q
    ||||| |||||||||||||||||||| | |  |||||| || ||||  ||||||||||||||||||||||  || ||||||||||||  ||   ||||||    
T  40566617 gaatgttagcaacacacattttaacacatatttttcaacacgctctttttgattggttaaaattcacatgagtctcaccaaatcatggaggatccatgta 40566518  T
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgt 191  Q
    ||||||||| ||| ||| | | |||||||||||||||    
T  40566517 aattttaacgaataaaaaaaaatgtgttgaaaaatgt 40566481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 20271023 - 20271092
Alignment:
Q  94 acactctcattgattggttaaaa--ttcacatggatcccaccaaatcatgtgggtctcatgtaaatttta 161  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| ||| |||||||||    
T  20271023 acactctctttgattggttaaaaaattcacatggatcccaccaaatcatgtgggtcccatataaatttta 20271092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 21057651 - 21057720
Alignment:
Q  94 acactctcattgattggttaaaa--ttcacatggatcccaccaaatcatgtgggtctcatgtaaatttta 161  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| ||| |||||||||    
T  21057651 acactctctttgattggttaaaaaattcacatggatcccaccaaatcatgtgggtcccatataaatttta 21057720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 54 - 145
Target Start/End: Complemental strand, 8402638 - 8402549
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtggg 145  Q
    |||||| |||||||||||||||||||| |||| |||||| ||||| |  |||||||||||||| || |||||  ||||||||||||||||||    
T  8402638 ggaatgctagcaacacacattttaacacacacttttcaacacactat--ttgattggttaaaactctcatgggccccaccaaatcatgtggg 8402549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 23848346 - 23848267
Alignment:
Q  114 aaattcacatggatcccaccaaatcatgtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    |||||||  ||| ||||||||||||||||||||| ||| | |||||||| |||||||||| ||||||||||||| |||||    
T  23848346 aaattcatttgggtcccaccaaatcatgtgggtcccatatgaattttaatcaatcaaagatagtgtgttgaaaagtgtgt 23848267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 34504517 - 34504434
Alignment:
Q  76 taacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||||| |||||| ||||| |  ||||||||||||||||| ||||| || |||||||||||||||||| ||| |||||||    
T  34504517 taacatacacttttcaacacactttttttgattggttaaaattcgcatgggtcacaccaaatcatgtgggtcccatataaattt 34504434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 38357546 - 38357660
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgt 153  Q
    |||||| |||||||||||||| || || |||| || ||| |||||||| |||||| ||| ||| |||||||   |||||||||||||||||||  |||||    
T  38357546 ggaatgctagcaacacacattctagcacacactttccaacacactctctttgattagttgaaactcacatgagacccaccaaatcatgtgggttccatgt 38357645  T
Q  154 aaattttaaccaatc 168  Q
    || ||||||| ||||    
T  38357646 aagttttaacaaatc 38357660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 26018582 - 26018517
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||| ||| |||||||    
T  26018582 acactctccttgattggttaaaattcacatgggtcccatcaaattatgtgggtcccatataaattt 26018517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 35586421 - 35586485
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||| |||||||||||||||||||| || ||||||||||||||||| ||||||| |||||||    
T  35586421 acactctctttgattggttaaaattcacacgg-tcccaccaaatcatgtgagtctcatataaattt 35586485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 20271173 - 20271105
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatg 124  Q
    |||| ||||||||||||||||||||  ||| |||||| |||||||| |||||| |||||||||||||||    
T  20271173 aatgttagcaacacacattttaacacgcacttttcaacacactctctttgattagttaaaattcacatg 20271105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 21057801 - 21057733
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatg 124  Q
    |||| ||||||||||||||||||||  ||| |||||| |||||||| |||||| |||||||||||||||    
T  21057801 aatgttagcaacacacattttaacacgcacttttcaacacactctctttgattagttaaaattcacatg 21057733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 36009984 - 36009901
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||||| |||||||| ||||||||||| |||| || ||| |||||||| ||| ||||||||||||||||||   ||||||||||    
T  36009984 ggaatgctagcaacaaacattttaacacacactttccaacacactctctttggttggttaaaattcacatgacacccaccaaat 36009901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 40176004 - 40175951
Alignment:
Q  106 attggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||| |||||||    
T  40176004 attggttaaaattcacatgggtcccaccaaattatgtgggtcccatataaattt 40175951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 42209483 - 42209406
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattttaaccaatcaaa 171  Q
    |||| ||| ||||||||||||||||||||||| |||||||| |||||||||||  ||| | ||| || ||||||||||    
T  42209483 acacactctttgattggttaaaattcacatggttcccaccatatcatgtgggttccatatgaatattgaccaatcaaa 42209406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 40696205 - 40696257
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggt 146  Q
    |||||||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  40696205 acactctttttgattagttaaaattcacatgggtcccaccaaatcatgtgggt 40696257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 2288646 - 2288599
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  2288646 catgtaaattttaaccaatcaaagagagtgtgttcgaaagtgtgtgtt 2288599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 27072899 - 27072954
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||  |||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  27072899 gtgggtccaatgtaaattttaaccaatcaaaaagaatgtgttgaaaagtgtgtgtt 27072954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 36009906 - 36009961
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||| |||||| |||||||||||| |||||||||||||||| ||| ||||||||    
T  36009906 gtgggtgtcatgtgaattttaaccaaccaaagagagtgtgttggaaagtgtgtgtt 36009961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 40694668 - 40694613
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||| ||||| ||||||||||||||||| ||| ||||||| ||||||||||||    
T  40694668 gtgggtcgcatgttaattttaaccaatcaaatagattgtgttgtaaaatgtgtgtt 40694613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 40696272 - 40696327
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||| ||||| ||||||||||||| ||||||| ||||||| ||||||||||||    
T  40696272 gtgggtcgcatgttaattttaaccaatgaaagagattgtgttgcaaaatgtgtgtt 40696327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 2288584 - 2288681
Alignment:
Q  62 agcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||||| ||| ||||| |||| ||  || |||||||| |||||||||||||||| |||||| |  ||||||||||  |||||| ||| |||||||    
T  2288584 agcaacacatattctaacacacactttcgaacacactctctttgattggttaaaatttacatgggtttcaccaaatcacatgggtcccatataaattt 2288681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 2288759 - 2288690
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatgg 125  Q
    |||| |||||||||||||| ||| | |||| |||||| |  ||||| |||||||||||||||||||||||    
T  2288759 aatgctagcaacacacattctaaaagacacttttcaacaatctctctttgattggttaaaattcacatgg 2288690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 4994181 - 4994238
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaatttt 160  Q
    |||||||||||||||||  |||  ||||||||||||||||||||| ||| ||||||||    
T  4994181 ttgattggttaaaattcttatgagtcccaccaaatcatgtgggtcccatataaatttt 4994238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 13260421 - 13260474
Alignment:
Q  106 attggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||||||| ||||||| ||||||||| ||||||||||| ||| |||||||    
T  13260421 attggttaaaatgcacatgggtcccaccaactcatgtgggtcccatataaattt 13260474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 38835005 - 38835082
Alignment:
Q  82 acacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||| |||||| ||| |||| |||||||  |||||||||||||| || |||||||||||| ||||| ||| |||||||    
T  38835005 acacatttcaacacattctctttgattgactaaaattcacatgggtctcaccaaatcatgcgggtcccatataaattt 38835082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 40566546 - 40566595
Alignment:
Q  147 ctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||| ||||||||||||||||| |||| |||||||||||| ||||||    
T  40566546 ctcatgtgaattttaaccaatcaaaaagagcgtgttgaaaaatatgtgtt 40566595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 20271104 - 20271152
Alignment:
Q  148 tcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||| ||||||||| ||||||||||||||||||||||| || |||||    
T  20271104 tcatgtgaattttaactaatcaaagagagtgtgttgaaaagtgcgtgtt 20271152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 21057732 - 21057780
Alignment:
Q  148 tcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||| ||||||||| ||||||||||||||||||||||| || |||||    
T  21057732 tcatgtgaattttaactaatcaaagagagtgtgttgaaaagtgcgtgtt 21057780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 27072970 - 27072894
Alignment:
Q  61 tagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||||||||| ||||||||| |||| |||||| ||| |||  |||||||||||||||| |||| |  ||||||||||    
T  27072970 tagcaacacatattttaacacacacttttcaacacattctttttgattggttaaaatttacattggacccaccaaat 27072894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 30649928 - 30650005
Alignment:
Q  55 gaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccacca 134  Q
    ||||| ||| ||||| |||||||||  |||| |||||| ||| |||  |||||| |||||||||||||||||||||||||    
T  30649928 gaatgctagtaacactcattttaactcacacttttcaacacattct--ttgatttgttaaaattcacatggatcccacca 30650005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 34504424 - 34504384
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaat 189  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  34504424 catgtgaattttaaccaatcaaaaagagtgtgttgaaaaat 34504384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 43042157 - 43042208
Alignment:
Q  95 cactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    ||||||| ||||||| |||||||||||||||  ||||||||||||||||||||    
T  43042157 cactctctttgattgattaaaattcacatgg-ccccaccaaatcatgtgggtc 43042208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 17893301 - 17893364
Alignment:
Q  61 tagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatg 124  Q
    ||||||||||||||||||||||||  ||| || | |||||| |||||| ||||||| |||||||    
T  17893301 tagcaacacacattttaacatacattttttaacagactctctttgattagttaaaactcacatg 17893364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 34504387 - 34504437
Alignment:
Q  87 tttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||||| |||||||  |||||||||||||||||||||||| | ||||||||    
T  34504387 tttcaacacactctttttgattggttaaaattcacatggaactcaccaaat 34504437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 4994238 - 4994292
Alignment:
Q  140 tgtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||  |||||||||||||||||  |||||||||| |||| ||||||||    
T  4994238 tgtgggtctcatacaaattttaaccaatcaa--agagtgtgttaaaaattgtgtgtt 4994292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 9814041 - 9814135
Alignment:
Q  61 tagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaat 157  Q
    |||||||||||||||||||||| |  || ||  |||||||| |||||| ||||||||||||| |  |||||| |||| |||||| | |||| |||||    
T  9814041 tagcaacacacattttaacatatattttcca--acactctctttgatttgttaaaattcacacgtgtcccactaaataatgtggatttcatataaat 9814135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 24306347 - 24306404
Alignment:
Q  140 tgtgggtctcatgtaaattttaaccaatc-aaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| |||||| |||||||||||||||| |||||||||||||   ||||||||||||    
T  24306347 tgtggatctcatataaattttaaccaatcaaaagagagtgtgtgttaaaatgtgtgtt 24306404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 38357624 - 38357571
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtg 194  Q
    ||||||||||||| | ||| ||| ||||||||||||||||||| ||| ||||||    
T  38357624 gtgggtctcatgtgagtttcaactaatcaaagagagtgtgttggaaagtgtgtg 38357571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 42886516 - 42886561
Alignment:
Q  106 attggttaaaattcacatggatcccaccaaatcatgtgggtctcat 151  Q
    ||||| ||||||| | |||||||||||||||| |||||||||||||    
T  42886516 attggataaaatttatatggatcccaccaaattatgtgggtctcat 42886561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 20271045 - 20271008
Alignment:
Q  157 ttttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  20271045 ttttaaccaatcaaagaga--gtgttgaaaaatgtgtgtt 20271008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 21057673 - 21057636
Alignment:
Q  157 ttttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  21057673 ttttaaccaatcaaagaga--gtgttgaaaaatgtgtgtt 21057636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 42072707 - 42072671
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaa 185  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  42072707 catgtgaatgttaaccaatcaaagagagtgtgttgaa 42072671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 12275898 - 12275795
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaa 155  Q
    |||| |||||||||||||| ||||| |||| || ||| |||||||| | |||||||||||||||| |||| ||||||||||||||||||||| ||| |||    
T  12275898 aatgctagcaacacacattctaacacacactttccaacacactctcttcgattggttaaaattcatatgggtcccaccaaatcatgtgggtcccatataa 12275799  T
Q  156 attt 159  Q
    ||||    
T  12275798 attt 12275795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 40134546 - 40134443
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgt 153  Q
    |||||| ||||||| |||||||||||| |||| || ||| ||||||||  |||||||||||||||||||||| ||||||||||| ||||||||| ||| |    
T  40134546 ggaatgctagcaacccacattttaacacacactttccaacacactctc--tgattggttaaaattcacatgggtcccaccaaattatgtgggtcccatat 40134449  T
Q  154 aaattt 159  Q
    ||||||    
T  40134448 aaattt 40134443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 147
Target Start/End: Complemental strand, 26863075 - 26862982
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||||| |||||||||||||||||| | |||| |||||  | |||||| || |||||||||||||||||||| |||||||||||||||||||||    
T  26863075 ggaatgctagcaacacacattttaatacacacttttcatcaaactctctttaattggttaaaattcacatgggtcccaccaaatcatgtgggtc 26862982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 29356934 - 29357036
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    |||||||| ||||||||||||||||||||||| | ||||||| ||| |||| || ||| | ||||||||| |||||||  |||||||||||||||| |||    
T  29356934 acactctctttgattggttaaaattcacatgggttccaccaattcacgtggatcccatatgaattttaacaaatcaaaccgagtgtgttgaaaaatatgt 29357033  T
Q  194 gtt 196  Q
    |||    
T  29357034 gtt 29357036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 2276276 - 2276337
Alignment:
Q  76 taacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    ||||| |||| |||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  2276276 taacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaccaaat 2276337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 49107057 - 49106980
Alignment:
Q  64 caacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatg 141  Q
    ||||| ||||| ||||| |||| |||||| |||||||| ||||||||||||||||||||| | |||||||||||||||    
T  49107057 caacatacattctaacacacacttttcaacacactctctttgattggttaaaattcacataggtcccaccaaatcatg 49106980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 11201293 - 11201375
Alignment:
Q  77 aacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||| |||| || ||| |||||||| || ||| |||||||||||||||| ||||||||||||| ||||||||||| |||||||    
T  11201293 aacacacactttccaacacactctctttcattagttaaaattcacatgggtcccaccaaatcacgtgggtctcatataaattt 11201375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 3235546 - 3235606
Alignment:
Q  64 caacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatg 124  Q
    ||||||||||||||||| |||| || ||| |||||||| ||||||||||||||||||||||    
T  3235546 caacacacattttaacacacactttccaatacactctctttgattggttaaaattcacatg 3235606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 2276324 - 2276277
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  2276324 catgtgaattttaaccaatcaaagagagtgtgttgaaaagtgtgtgtt 2276277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 3235613 - 3235559
Alignment:
Q  142 tgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||||||| ||||||||||||||||||||||||| ||| ||| ||||||||    
T  3235613 tgggtctcatgtgaattttaaccaatcaaagagagtgtattggaaagtgtgtgtt 3235559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 7017179 - 7017225
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  7017179 atgtgaattttaaccaatcaaagagagtgtattgaaaaatgtgtgtt 7017225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 7032537 - 7032583
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  7032537 atgtgaattttaaccaatcaaagagagtgtattgaaaaatgtgtgtt 7032583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 156
Target Start/End: Complemental strand, 10056785 - 10056683
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgt 153  Q
    |||||| || ||||||||||| |||||  ||| |||||| |||||||| || ||| |||||||| || |||| |||| |||||||||||||||| ||| |    
T  10056785 ggaatgctaacaacacacattctaacacgcacttttcaacacactctctttaattagttaaaatccatatgggtccctccaaatcatgtgggtcccatat 10056686  T
Q  154 aaa 156  Q
    |||    
T  10056685 aaa 10056683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 49106998 - 49107044
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||    
T  49106998 atgtgaattttaaccaatcaaagagagtgtgttgaaaagtgtgtgtt 49107044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 316449 - 316498
Alignment:
Q  147 ctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||| |||||| ||||||||||||| ||||||||||||||||||||    
T  316449 ctcatgtagattttatccaatcaaagagaatgtgttgaaaaatgtgtgtt 316498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 24516582 - 24516623
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgg 144  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  24516582 ttgattggttaaaattcacatgggtcccaccaaatcatgtgg 24516623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 47497852 - 47497769
Alignment:
Q  64 caacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    ||||||||||| ||||| |||  |||||| | | | || ||||||||||||||||||||||  ||||||||||| |||||||||    
T  47497852 caacacacattctaacacacatttttcaatatattttctttgattggttaaaattcacatgagtcccaccaaattatgtgggtc 47497769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 5443622 - 5443668
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  5443622 atgtgaattttaaccaatcaaagaaagtatgttgaaaaatgtgtgtt 5443668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 5452667 - 5452713
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  5452667 atgtgaattttaaccaatcaaagaaagtatgttgaaaaatgtgtgtt 5452713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 31042118 - 31042184
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcaca 122  Q
    ||||| ||||||||| ||||||||| |||| |||||| ||| | || ||||||||||||||||||||    
T  31042118 aatggcagcaacacatattttaacacacacttttcaatacattatctttgattggttaaaattcaca 31042184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 2276387 - 2276346
Alignment:
Q  106 attggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  2276387 attggttaaaattcacatgaatcccaccaaattatgtgggtc 2276346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 3235681 - 3235616
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||  ||||||||||||||||||||||| ||| ||| ||  ||||||||| |||||||||||    
T  3235681 acactctttttgattggttaaaattcacatgggtccgacccaaatatgtgggtcccatgtaaattt 3235616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 5443690 - 5443602
Alignment:
Q  55 gaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgg 144  Q
    ||||| |||||||||||||| ||||| |||  |||||| | ||| || ||||||||||||||||||||| | | ||||||||| ||||||    
T  5443690 gaatgctagcaacacacattctaacacacatttttcaacatactttctttgattggttaaaattcacatagct-ccaccaaattatgtgg 5443602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 5452735 - 5452667
Alignment:
Q  55 gaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacat 123  Q
    ||||| |||||||||||||| ||||| |||  |||||| | ||| || |||||||||||||||||||||    
T  5452735 gaatgctagcaacacacattctaacacacatttttcaacatactttctttgattggttaaaattcacat 5452667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 7017215 - 7017143
Alignment:
Q  87 tttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||| |||||||| |||||||||||||||||||||   ||| ||||||| |||||| || ||| |||||||    
T  7017215 tttcaatacactctctttgattggttaaaattcacataagtcctaccaaattatgtggatcccatataaattt 7017143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 7032573 - 7032501
Alignment:
Q  87 tttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||| |||||||| |||||||||||||||||||||   ||| ||||||| |||||| || ||| |||||||    
T  7032573 tttcaatacactctctttgattggttaaaattcacataagtcctaccaaattatgtggatcccatataaattt 7032501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 31042458 - 31042394
Alignment:
Q  61 tagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatgg 125  Q
    |||||||||| |||||||||||||| ||| || | |||||| |||||||||||||| || |||||    
T  31042458 tagcaacacatattttaacatacactttttaatatactctctttgattggttaaaactcgcatgg 31042394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 7526135 - 7526178
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||||| | |||||| ||||||||||||||||||||||||||||    
T  7526135 acactcactttgatttgttaaaattcacatggatcccaccaaat 7526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 26647742 - 26647691
Alignment:
Q  145 gtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||| ||||||||||||| ||| ||| | ||||||||||||||||||    
T  26647742 gtctcatgtgaattttaaccaatgaaaaagactatgttgaaaaatgtgtgtt 26647691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 46074140 - 46074192
Alignment:
Q  142 tgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||| ||||||| ||||||||||||| ||||||||||||||  ||||||||||||    
T  46074140 tgggactcatgtgaattttaaccaattaaagagagtgtgtt--aaaatgtgtgtt 46074192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 47497784 - 47497839
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| ||||||| ||||||||||||||||||| | | | ||||||||||||||||    
T  47497784 gtgggactcatgtgaattttaaccaatcaaagaaaatatattgaaaaatgtgtgtt 47497839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 18089824 - 18089774
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgg 144  Q
    |||||||| ||| ||||||||||||||||||| ||| ||||||| ||||||    
T  18089824 acactctctttggttggttaaaattcacatgggtccaaccaaattatgtgg 18089774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 2417118 - 2417182
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||| |||| |||| ||||||||||||||| ||| |||||||||||| || ||| |||||||    
T  2417118 acactctcgttgaatggtcaaaattcacatggat-ccatcaaatcatgtggatcccatataaattt 2417182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 12275836 - 12275877
Alignment:
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||||||||| |||||||||||||| ||| ||||||||    
T  12275836 aattttaaccaatcgaagagagtgtgttggaaagtgtgtgtt 12275877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 46074177 - 46074112
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||| || |||||||||||||||||||  ||||| ||||||| |||| || ||| |||||||    
T  46074177 acactctctttaattggttaaaattcacatgagtcccatcaaatcacgtggatcccatataaattt 46074112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 7526231 - 7526175
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||||||||||| |||||  || ||||||||||||  |||||||| |||||||    
T  7526231 ttgattggttaaaatttacatgtgtctcaccaaatcatgctggtctcatataaattt 7526175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 10056633 - 10056681
Alignment:
Q  87 tttcaagacactctcattgattggttaaaattcacatggatcccaccaa 135  Q
    |||||| |||||||  ||||||||| |||||||||||||| ||||||||    
T  10056633 tttcaacacactctttttgattggtcaaaattcacatggaacccaccaa 10056681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 18089794 - 18089838
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    ||||| |||||||||||| ||||||||||||||| |||| |||||    
T  18089794 catgtgaattttaaccaaccaaagagagtgtgttaaaaagtgtgt 18089838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 26862960 - 26862915
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| |||||||||||||||| |||||||||||  ||||||||||||    
T  26862960 catgtgaattttaaccaatcaaggagagtgtgtt--aaaatgtgtgtt 26862915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 29356964 - 29356932
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgt 181  Q
    ||||| |||||||||||||||||||||||||||    
T  29356964 catgtgaattttaaccaatcaaagagagtgtgt 29356932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 40803294 - 40803234
Alignment:
Q  65 aacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatgg 125  Q
    |||||||||| |||||||||| ||| || ||||| |  || ||||||||||||||||||||    
T  40803294 aacacacattctaacatacactttttaaaacactattttttattggttaaaattcacatgg 40803234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 2542757 - 2542702
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2542757 gtgggcctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 2542702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 34437752 - 34437666
Alignment:
Q  61 tagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    ||||||||||||||||||||  ||| |||||| |||||||| ||||||||||||||||||||||| |||| |||||| || ||||||    
T  34437752 tagcaacacacattttaacacgcacttttcaacacactctctttgattggttaaaattcacatgggtccccccaaattatatgggtc 34437666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 49822690 - 49822607
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||||| |||||||||| ||| ||||| |||  |||||| |||||||| ||||||||||||||||||||||||||||| |||||    
T  49822690 ggaatgctagcaacacatattataacacacatttttcaacacactctctttgattggttaaaattcacatggatcccatcaaat 49822607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 38663629 - 38663721
Alignment:
Q  55 gaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    ||||| ||| |||||||||||||||| | |  |||||| |||||||| ||||||||||| ||||||||| | |||||||||||||| ||||||    
T  38663629 gaatgttagtaacacacattttaacacatatttttcaacacactctctttgattggttacaattcacataggtcccaccaaatcatatgggtc 38663721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 45563045 - 45563148
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaa 155  Q
    |||| ||||||||| || |||||||||||  ||  || ||||| || ||||||||||||||| ||||||| |||||||||||||||| | |||||| |||    
T  45563045 aatgctagcaacacccaatttaacatacattttctaacacactatctttgattggttaaaatgcacatggctcccaccaaatcatgttgatctcatataa 45563144  T
Q  156 attt 159  Q
    ||||    
T  45563145 attt 45563148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 49822620 - 49822667
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  49822620 catgtgaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 49822667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 145
Target Start/End: Original strand, 34437608 - 34437666
Alignment:
Q  87 tttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtggg 145  Q
    |||||| | |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  34437608 tttcaacaaactctctttgattggttaaaattcacatgggtcccaccaaatcatgtggg 34437666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 40669087 - 40669008
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||| ||||||||||||||||||||  ||| |||||| |||||||| |||||||||||||||||||| || | |||||||||    
T  40669087 aatgctagcaacacacattttaaca--cacttttcaacacactctctttgattggttaaaattcacacgggttccaccaaat 40669008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 7444260 - 7444363
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaa 155  Q
    |||| |||||||||||||||||||| |||  |||||| ||| | || || || |||||||||||| |  | ||||||||||||||||||||| ||| |||    
T  7444260 aatgctagcaacacacattttaacacacatttttcaacacattttctttaatcggttaaaattcaaagagttcccaccaaatcatgtgggtcccatataa 7444359  T
Q  156 attt 159  Q
    ||||    
T  7444360 attt 7444363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 21281461 - 21281539
Alignment:
Q  61 tagcaacacacattttaacatacacctttcaagacactctcatt-gattggttaaaattcacatggatcccaccaaatc 138  Q
    |||||||||| |||||||||||||| |||||| ||| |||  || ||||||||||||||||||| | ||||||||||||    
T  21281461 tagcaacacatattttaacatacacttttcaacacattcttttttgattggttaaaattcacataggtcccaccaaatc 21281539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 31970166 - 31970120
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  31970166 atgtgaattttaaccaatcaaaaagagtgtgttgaaaaatgtgtgtt 31970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 34437639 - 34437598
Alignment:
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  34437639 aattttaaccaatcaaagagagtttgttgaaaaatgtgtgtt 34437598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 40374183 - 40374094
Alignment:
Q  67 cacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||||||||||  ||  |||||| || ||||  |||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||    
T  40374183 cacacattttaaca--catttttcaatacgctctatttgattggttaaaattcacatggc-cccaccaaatcatgtgggtcccatataaattt 40374094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 2542820 - 2542772
Alignment:
Q  98 tctcattgattggttaaaattcacatggatcccaccaaatcatgtgggt 146  Q
    |||| ||||||||||||||||||||||| | ||||||||||||||||||    
T  2542820 tctctttgattggttaaaattcacatggcttccaccaaatcatgtgggt 2542772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 16661863 - 16661815
Alignment:
Q  148 tcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  16661863 tcatgtgaattttaaccgatcaaagagaatgtgttgaaaaatgtgtgtt 16661815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 34437689 - 34437736
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| ||||||||||||||||||||||||||||||||| || |||||    
T  34437689 catgtgaattttaaccaatcaaagagagtgtgttgaaaagtgcgtgtt 34437736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 45563150 - 45563201
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtg 192  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||| ||||    
T  45563150 gtggatctcatgtaaattttaaccgatcaaagaaagtgtgttgaaaagtgtg 45563201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 38663697 - 38663651
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||||    
T  38663697 atgtgaattgtaaccaatcaaagagagtgtgttgaaaaatatgtgtt 38663651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 40669027 - 40669065
Alignment:
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  40669027 aattttaaccaatcaaagagagtgtgttgaaaagtgtgt 40669065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 7444441 - 7444372
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatgg 125  Q
    |||| |||||||||||||| ||||| |||| |||||| ||| |||| |||||  ||||||||||||||||    
T  7444441 aatgttagcaacacacattctaacaaacacttttcaacacattctctttgatgagttaaaattcacatgg 7444372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 23317942 - 23317991
Alignment:
Q  110 gttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||||||||| | ||||||||||||||||||||| ||| |||||||    
T  23317942 gttaaaattcacataggtcccaccaaatcatgtgggtcccatataaattt 23317991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 31851952 - 31851993
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgt 191  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  31851952 atgtgaattttaacaaatcaaagagagtgtgttgaaaaatgt 31851993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 31970262 - 31970177
Alignment:
Q  74 tttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||| || | |||||| |||||||  || |||| ||||| |||| |||| ||||||||||||||||||||| ||| |||||||    
T  31970262 tttaacacacgcttttcaacacactctttttaattgattaaatttcatatgggtcccaccaaatcatgtgggtcccatataaattt 31970177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 11120376 - 11120328
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtctcat 151  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||| ||||    
T  11120376 ttgattgattaaaattcacacggatcccaccaaatcatgttggtttcat 11120328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 38663735 - 38663790
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||| ||||| ||||||||||||| ||| ||||| |||||||||||| |||||    
T  38663735 gtgggtcccatgtgaattttaaccaattaaaaagagtatgttgaaaaatgcgtgtt 38663790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 31970130 - 31970180
Alignment:
Q  87 tttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||||| |||||||  ||||||||||||||||||||| || ||||||||||    
T  31970130 tttcaacacactctttttgattggttaaaattcacattgaacccaccaaat 31970180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 731440 - 731387
Alignment:
Q  106 attggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||||||||| |||||  || |||||||||||||||||| ||| |||||||    
T  731440 attggttaaaatttacatgagtcgcaccaaatcatgtgggtcccatataaattt 731387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 939494 - 939425
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatgg 125  Q
    |||| |||||| ||||||||||||||||   |||||| ||| | || |||||||||||||||| ||||||    
T  939494 aatgctagcaagacacattttaacatacgtatttcaacacattatctttgattggttaaaatttacatgg 939425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 939426 - 939463
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaa 186  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  939426 catgtaaattttaaccaatcaaagataatgtgttgaaa 939463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 2542697 - 2542762
Alignment:
Q  72 attttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    ||||||||| |||  |||||| |||||||| |||||||||||||||| |||||   ||||||||||    
T  2542697 attttaacacacatttttcaacacactctctttgattggttaaaatttacatgaggcccaccaaat 2542762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 2542794 - 2542835
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatg 190  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||    
T  2542794 catgtgaattttaaccaatcaaagagaatgtgttggaaaatg 2542835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 40668946 - 40669011
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||| |||||||||||||| |||||||| || ||| |||| ||||||| | ||| |||||||    
T  40668946 acactctctttgattggttaaaactcacatgggtctcacaaaattatgtgggacccatataaattt 40669011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 11105966 - 11105994
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtg 178  Q
    |||||||||||||||||||||||||||||    
T  11105966 atgtaaattttaaccaatcaaagagagtg 11105994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 15366478 - 15366542
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaatt 118  Q
    |||||| |||||||||||||| ||| | |||| || ||| |||||||  ||||||||||||||||    
T  15366478 ggaatgctagcaacacacattctaagacacactttccaacacactctttttgattggttaaaatt 15366542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 22336918 - 22336954
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatca 139  Q
    |||||||||||||||||||||||||| || |||||||    
T  22336918 ttgattggttaaaattcacatggatctcatcaaatca 22336954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 40374128 - 40374172
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    ||||| ||||||||||||||||| |||| || |||||||||||||    
T  40374128 catgtgaattttaaccaatcaaatagagcgtattgaaaaatgtgt 40374172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 40668968 - 40668931
Alignment:
Q  157 ttttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  40668968 ttttaaccaatcaaagagagtgtgtt--aaaatgtgtgtt 40668931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 43884468 - 43884524
Alignment:
Q  140 tgtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||  |||||||| |||| |||| |||||||||||||| |||||||| ||||    
T  43884468 tgtgggtccgatgtaaatattaatcaattaaagagagtgtgttaaaaaatgtatgtt 43884524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 49403556 - 49403604
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaat 189  Q
    ||||||||||||| ||||||||| ||| ||| | |||||||||||||||    
T  49403556 gtgggtctcatgtgaattttaacaaataaaaaaaagtgtgttgaaaaat 49403604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 3e-19; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 36059360 - 36059264
Alignment:
Q  63 gcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||||||| ||||| | || || ||| ||||| |  |||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  36059360 gcaacacacattctaacacatactttccaacacactttatttgattggttaaaatttacatggatcccatcaaatcatgtgggtctcatataaattt 36059264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 35244861 - 35244947
Alignment:
Q  98 tctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattttaaccaatcaaagagagtgtgttga 184  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| | | | | | ||||| ||||||||||||| ||||||||||    
T  35244861 tctctttgattggttaaaattcacatggatcccaccatatcatgtgtgacccctatgaatttcaaccaatcaaagaaagtgtgttga 35244947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 3907767 - 3907711
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||    
T  3907767 ttgattggttaaaattcacatgggtcccaccaaatcatgtgggtcccatataaattt 3907711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 3907635 - 3907714
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||| |||||||||||||| ||||| |||| |||||| |||||||  |||||||||||||||||||||||  ||||||||||    
T  3907635 aatgctagcaacacacattctaacaaacacttttcaacacactct--ttgattggttaaaattcacatgggacccaccaaat 3907714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 25545273 - 25545220
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  25545273 gtgggtctcatgtgaattttaaccaatcaa--agagtgtgttgaaaaatgtgtgtt 25545220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 27195411 - 27195309
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaa 155  Q
    |||| ||| |||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||||||||||  |||||| ||||||||| || | ||| |||    
T  27195411 aatgctagtaacacacattttaacacacac-tttcaatgcactctctttgattgattaaaattcacatgagtcccacaaaatcatgtcggacccatataa 27195313  T
Q  156 attt 159  Q
    ||||    
T  27195312 attt 27195309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 38029566 - 38029621
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaatt 158  Q
    ||||||||||||||||||||||| || ||||||||||||||| |||||| ||||||    
T  38029566 ttgattggttaaaattcacatgggtctcaccaaatcatgtggatctcatataaatt 38029621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 4190076 - 4190129
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtc 147  Q
    |||||||| ||||||||||||||||||||||||||||| ||||| | |||||||    
T  4190076 acactctctttgattggttaaaattcacatggatcccaacaaattacgtgggtc 4190129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 25545340 - 25545275
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||| ||||||||||||||||||| ||  |||||||||||||||| |||| ||| |||||||    
T  25545340 acactctctttgattggttaaaattcacgtgagtcccaccaaatcatgtcggtcccatataaattt 25545275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 28907416 - 28907368
Alignment:
Q  148 tcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  28907416 tcatgtgaattttaaccgatcaaagagaatgtgttgaaaaatgtgtgtt 28907368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 28943811 - 28943763
Alignment:
Q  148 tcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  28943811 tcatgtgaattttaaccgatcaaagagaatgtgttgaaaaatgtgtgtt 28943763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 35244980 - 35244916
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattca 120  Q
    |||| ||||||||||||||||||||||||| | |||| ||||| || |||||||||| |||||||    
T  35244980 aatgctagcaacacacattttaacatacacttgtcaacacactttctttgattggttgaaattca 35244916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 159
Target Start/End: Complemental strand, 4158199 - 4158136
Alignment:
Q  96 actctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||| |||||||||||||||||||| | |||||| ||||| ||||||| ||||| |||||||    
T  4158199 actctctttgattggttaaaattcacacgaatcccatcaaattatgtgggactcatataaattt 4158136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 17474935 - 17474864
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatgg 125  Q
    |||||| || ||||| ||||||||||| |||| |||||| |||| ||| ||||||| |||||||||||||||    
T  17474935 ggaatgctaacaacatacattttaacacacacttttcaacacacactctttgattgattaaaattcacatgg 17474864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 41169482 - 41169529
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||||    
T  41169482 catgtgaattttaacggatcaaagagagtgtgttgaaaaatgtgtgtt 41169529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 22399825 - 22399779
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaa 187  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  22399825 gtgggtctcatgtgaattttatccaatcaaaaagagtgtgttgaaaa 22399779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 22399892 - 22399835
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcat 151  Q
    |||||||| ||||||||||||||||||||||  ||| || ||||||| ||||||||||    
T  22399892 acactctctttgattggttaaaattcacatgagtcctactaaatcatctgggtctcat 22399835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 25545199 - 25545265
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatg 124  Q
    |||| |||||| ||||||||||||| |||  |||||| |||||||  ||||||||||||||||||||||    
T  25545199 aatgctagcaatacacattttaacacacatttttcaacacactct--ttgattggttaaaattcacatg 25545265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 41169407 - 41169472
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    |||||||  |||||||||| |||||||||||||| ||||||||||||| | ||| ||| |||||||    
T  41169407 acactctatttgattggttgaaattcacatggattccaccaaatcatgcgagtcccatataaattt 41169472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 4190221 - 4190138
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacac--tctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||| |||||||| ||||| ||||| |||| |||||| ||||  |||| ||||| |||||||||||||||||  ||||||||||    
T  4190221 aatgctagcaacatacattctaacacacacttttcaacacacggtctctttgataggttaaaattcacatgggacccaccaaat 4190138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 25545302 - 25545355
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| |||| || ||||||||||||||||||||||||||||  ||||||||||||    
T  25545302 gtgggactcacgtgaattttaaccaatcaaagagagtgtgtt--aaaatgtgtgtt 25545355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 17474865 - 17474912
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||| |||||||| ||||||||||| |||||||||||| ||||||||    
T  17474865 catgtgaattttaatcaatcaaagagtgtgtgttgaaaagtgtgtgtt 17474912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 22399747 - 22399830
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||||| |||||||||||||| ||| |  ||| |||||| |||||||  |||||||| |||||||||||||   ||||||||||    
T  22399747 ggaatgctagcaacacacattctaatactcacttttcaacacactctttttgattggataaaattcacatgagacccaccaaat 22399830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 33029578 - 33029625
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaa 188  Q
    ||||| ||||||| | |||||||| |||||||||||||||||||||||    
T  33029578 gtgggactcatgtgagttttaaccgatcaaagagagtgtgttgaaaaa 33029625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 40927690 - 40927745
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||| ||||| |||||| |||||||||||| ||| ||||||||||| ||||||    
T  40927690 gtgggtcccatgtgaattttgaccaatcaaagatagtttgttgaaaaatttgtgtt 40927745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 42249457 - 42249410
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||||||| ||| | ||||||||||||||| ||||||    
T  42249457 catgtaaattttaaccaattaaaaatagtgtgttgaaaaatatgtgtt 42249410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 196
Target Start/End: Complemental strand, 42420056 - 42420017
Alignment:
Q  157 ttttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  42420056 ttttaaccaattaaagagaatgtgttgaaaaatgtgtgtt 42420017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 3416319 - 3416273
Alignment:
Q  140 tgtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaa 186  Q
    |||||| | |||||||||||||| |||||||||| ||||||||||||    
T  3416319 tgtgggacacatgtaaattttaatcaatcaaagaaagtgtgttgaaa 3416273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 183
Target Start/End: Complemental strand, 4190106 - 4190072
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttg 183  Q
    ||||| |||||||||||||||||||||||||||||    
T  4190106 catgtgaattttaaccaatcaaagagagtgtgttg 4190072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 4190143 - 4190200
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagaga--gtgtgttgaaaaatgtgtgtt 196  Q
    ||||||| ||||| |||||||||| ||||||||||  |||||||||||| ||||||||    
T  4190143 gtgggtcccatgtgaattttaacctatcaaagagaccgtgtgttgaaaagtgtgtgtt 4190200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 32309690 - 32309736
Alignment:
Q  150 atgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    |||||||||||||| ||||||||||| || |||||||| ||||||||    
T  32309690 atgtaaattttaacaaatcaaagagaatgcgttgaaaagtgtgtgtt 32309736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 4158177 - 4158218
Alignment:
Q  155 aattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||||||||||| | || |||||||||||||    
T  4158177 aattttaaccaatcaaagagagtatattaaaaaatgtgtgtt 4158218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 33029473 - 33029554
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    |||| |||||||||| ||||||||||| || |||||| ||| |||| || ||| ||||||||||| ||   |||||||||||    
T  33029473 aatgctagcaacacatattttaacatatacttttcaacacattctctttaattagttaaaattcatataagtcccaccaaat 33029554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 42419994 - 42420099
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgt 153  Q
    |||||| || |||||| |||| ||||| |||  |||||| ||| |||| || |||||||||||   || ||| |||||||||||||||||| || ||| |    
T  42419994 ggaatgctaacaacactcattctaacacacatttttcaacacattctctttaattggttaaaacatacgtgggtcccaccaaatcatgtggatcccatat 42420093  T
Q  154 aaattt 159  Q
    ||||||    
T  42420094 aaattt 42420099  T

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Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 42420106 - 42420147
Alignment:
Q  146 tctcatgtaaattttaaccaatcaaagagagtgtgttgaaaa 187  Q
    |||||||| | ||||||||||||||| |||||||||||||||    
T  42420106 tctcatgtgagttttaaccaatcaaatagagtgtgttgaaaa 42420147  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 1570066 - 1569978
Alignment:
Q  94 acactctcattgattggttaaaattcacatggatcccaccaaatc-atgtgggtctcatgtaaattttaaccaatcaaagagagtgtgt 181  Q
    ||||| || |||||||||||||| | | ||||||| ||||||||  || |||| | |||||  ||||||||||||||||||| ||||||    
T  1570066 acactttctttgattggttaaaactaaaatggatctcaccaaatttatatgggacccatgtggattttaaccaatcaaagagtgtgtgt 1569978  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 3771279 - 3771223
Alignment:
Q  103 ttgattggttaaaattcacatggatcccaccaaatcatgtgggtctcatgtaaattt 159  Q
    ||||||||||||||||||||| | | ||||||||||||| ||| | ||| |||||||    
T  3771279 ttgattggttaaaattcacattggttccaccaaatcatgcgggacccatataaattt 3771223  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 3907709 - 3907656
Alignment:
Q  141 gtgggtctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||| ||||| ||||||||||||||||  ||||||||||||||| ||| ||||    
T  3907709 gtgggtcccatgtgaattttaaccaatcaa--agagtgtgttgaaaagtgtttgtt 3907656  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Original strand, 22399860 - 22399892
Alignment:
Q  147 ctcatgtaaattttaaccaatcaaagagagtgt 179  Q
    ||||||| |||||||||||||||||||||||||    
T  22399860 ctcatgtgaattttaaccaatcaaagagagtgt 22399892  T

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Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 40529937 - 40530009
Alignment:
Q  65 aacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaat 137  Q
    ||||||||||||||||||||| ||| |||| | |||  ||||||| |||||||| |||||  ||||| |||||    
T  40529937 aacacacattttaacatacactttttaagaaattctatttgattgtttaaaattaacatgagtcccatcaaat 40530009  T

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Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 41169550 - 41169482
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatg 124  Q
    |||| ||| |||||| ||||||||| |||  |||||| |||||||| |||||  |||||||||||||||    
T  41169550 aatgctagtaacacatattttaacacacatttttcaacacactctctttgatccgttaaaattcacatg 41169482  T

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Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 42420177 - 42420109
Alignment:
Q  56 aatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatg 124  Q
    |||| |||||||||||||| ||| | || | |||||| |||||||  |||||||||||||| |||||||    
T  42420177 aatgttagcaacacacattctaaaacacgcttttcaacacactctatttgattggttaaaactcacatg 42420109  T

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Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 143
Target Start/End: Complemental strand, 136488 - 136394
Alignment:
Q  49 agaggggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtg 143  Q
    |||| |||||| |||||| ||||||||||||| |||  |||||| |||||||  |||||||||||||| |||||||  ||||| |||||||||||    
T  136488 agagaggaatgctagcaatacacattttaacacacatttttcaacacactctttttgattggttaaaactcacatgtgtcccatcaaatcatgtg 136394  T

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Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 196
Target Start/End: Original strand, 136421 - 136460
Alignment:
Q  157 ttttaaccaatcaaagagagtgtgttgaaaaatgtgtgtt 196  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  136421 ttttaaccaatcaaaaagagtgtgttgaaaaatgtgtgtt 136460  T

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Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 148
Target Start/End: Complemental strand, 201119 - 201025
Alignment:
Q  54 ggaatggtagcaacacacattttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtgggtct 148  Q
    |||||| || ||| ||||||||||||| |||| | |||| |||||||| |||||| ||||| |||||||||  |||||| |||||| ||||||||    
T  201119 ggaatgctaacaatacacattttaacacacacttatcaacacactctctttgatttgttaagattcacatgtgtcccactaaatcaggtgggtct 201025  T

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Target: scaffold0137 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 8322 - 8251
Alignment:
Q  74 tttaacatacacctttcaagacactctcattgattggttaaaattcacatggatcccaccaaatcatgtggg 145  Q
    ||||||| |||| ||||||  || |||  |||||||| ||||||||||||| |||||||||||| |||||||    
T  8322 tttaacacacacttttcaacgcattctttttgattggctaaaattcacatgaatcccaccaaattatgtggg 8251  T

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Target: scaffold0620 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 9238 - 9282
Alignment:
Q  149 catgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 193  Q
    ||||| ||||||||||||||||||||| | ||||||||| |||||    
T  9238 catgtgaattttaaccaatcaaagagattatgttgaaaagtgtgt 9282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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