View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20098_low_6 (Length: 417)

Name: NF20098_low_6
Description: NF20098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20098_low_6
NF20098_low_6
[»] chr4 (21 HSPs)
chr4 (18-404)||(5035547-5035933)
chr4 (18-339)||(2525682-2526003)
chr4 (18-160)||(2491053-2491195)
chr4 (18-159)||(2486232-2486373)
chr4 (72-155)||(2536564-2536647)
chr4 (21-139)||(2519161-2519279)
chr4 (18-78)||(2534240-2534300)
chr4 (33-160)||(2467470-2467597)
chr4 (253-339)||(2536651-2536737)
chr4 (281-333)||(2625296-2625348)
chr4 (268-339)||(2491249-2491320)
chr4 (21-150)||(2621163-2621292)
chr4 (97-150)||(2367678-2367731)
chr4 (36-136)||(2477511-2477611)
chr4 (281-340)||(2467679-2467738)
chr4 (86-136)||(5106330-5106380)
chr4 (97-151)||(6007669-6007723)
chr4 (279-340)||(5101944-5102005)
chr4 (282-362)||(2486430-2486510)
chr4 (277-333)||(2519366-2519422)
chr4 (100-136)||(12121013-12121049)
[»] chr7 (2 HSPs)
chr7 (36-133)||(2576415-2576512)
chr7 (103-151)||(15091356-15091404)
[»] chr5 (3 HSPs)
chr5 (97-133)||(32268774-32268810)
chr5 (97-151)||(41900257-41900311)
chr5 (100-145)||(12846943-12846988)
[»] chr1 (3 HSPs)
chr1 (97-133)||(15837982-15838018)
chr1 (97-151)||(33161437-33161491)
chr1 (109-150)||(7555449-7555490)
[»] chr8 (1 HSPs)
chr8 (97-145)||(32152210-32152258)


Alignment Details
Target: chr4 (Bit Score: 359; Significance: 0; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 18 - 404
Target Start/End: Original strand, 5035547 - 5035933
Alignment:
Q  18 atattgagtgatgtaatattagggaacctttcaaagagacgattaaggaaagggattgttgcctcggagattttgaccaagaatcgaagacggttggtga 117  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5035547 atattgagtgatgtaatattagggaacctttcaaagagacgactaaggaaagggattgttgcctcagagattttgaccaagaatcgaagacggttggtga 5035646  T
Q  118 tggagagaaactgttttgaaacgagggaaagagacctgaaactaccgtttgtgattggcatatcttgttctgagacgtgatagagagactttattctgcg 217  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5035647 tggagagaaactgttttgaaacgaaggaaagagacctgaaactactgtttgtgattggcatatcttgttctgagacgtgatagagagactttattctgcg 5035746  T
Q  218 ggggtgatcggcaaaacctagattcccattaggacgaagaaggttgaatgtgttgttctcctcgtcgttgaggaatttgaaaatgtgttcccataaatcc 317  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  5035747 ggggtgatcggcaaaacctagattcccattaggacgaagaagtttgaatgtgttgttctcctcgtcgttgaggaatttgaagatgttttcccataaatcc 5035846  T
Q  318 tctggtaaatttgaacgtgttgcttctgtttctgttcccatttttcgtttcttagggttttcctctgttgctgctattttctctgct 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5035847 tctggtaaatttgaacgtgttgcttctgtttctgttcccatttttcgtttcttagggttttcctctgttgctgctattttctctgct 5035933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 18 - 339
Target Start/End: Original strand, 2525682 - 2526003
Alignment:
Q  18 atattgagtgatgtaatattagggaacctttcaaagagacgattaaggaaagggattgttgcctcggagattttgaccaagaatcgaagacggttggtga 117  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||| ||||| | ||||||| |||||||||||||||||| ||||||||    
T  2525682 atattgagtgatgcaatgttagggaacctttcaaagagacgattaagaaaagggatagttgcattggagattgtgaccaagaatcgaagactgttggtga 2525781  T
Q  118 tggagagaaactgttttgaaacgagggaaagagacctgaaactaccgtttgtgattggcatatcttgttctgagacgtgatagagagactttattctgcg 217  Q
    |||| |||||||||||||| |||||||| ||||| |||||||||||||| ||||| || | |  ||||| ||||||||| |||||||    |||||||||    
T  2525782 tggacagaaactgttttgagacgagggagagagatctgaaactaccgttggtgatgggtagagattgttttgagacgtggtagagagttcctattctgcg 2525881  T
Q  218 ggggtgatcggcaaaacctagattcccattaggacgaagaaggttgaatgtgttgttctcctcgtcgttgaggaatttgaaaatgtgttcccataaatcc 317  Q
      ||  ||    |||||||| |||||||| | |||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||    
T  2525882 ctggatatgttgaaaacctatattcccatcaagacgaagaaggttgaaggtgttgttgtcctcgtcgttgaggaatttgaagatgtgttcccataactcc 2525981  T
Q  318 tctggtaaatttgaacgtgttg 339  Q
    |||||||||| |||||||||||    
T  2525982 tctggtaaatatgaacgtgttg 2526003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 2491053 - 2491195
Alignment:
Q  18 atattgagtgatgtaatattagggaacctttcaaagagacgattaaggaaagggattgttgcctcggagattttgaccaagaatcgaagacggttggtga 117  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | ||||| |||||||| ||||    
T  2491053 atattgattgatgtaatgttagggaacctttcaaagagacgattaaggaaagggattgttgcatcggagattgtgaccgaaaatcggagacggtttgtga 2491152  T
Q  118 tggagagaaactgttttgaaacgagggaaagagacctgaaact 160  Q
    |||| |||||||||||||| ||||| || ||||||||||||||    
T  2491153 tggacagaaactgttttgagacgagtgagagagacctgaaact 2491195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 2486232 - 2486373
Alignment:
Q  18 atattgagtgatgtaatattagggaacctttcaaagagacgattaaggaaagggattgttgcctcggagattttgaccaagaatcgaagacggttggtga 117  Q
    |||||| | ||||||| |||||||||||  | ||||||||||| ||||||||||||||||  |||||||||| ||||| ||||||| |||||||||||||    
T  2486232 atattgtgggatgtaacattagggaacccataaaagagacgatgaaggaaagggattgttttctcggagattgtgaccgagaatcggagacggttggtga 2486331  T
Q  118 tggagagaaactgttttgaaacgagggaaagagacctgaaac 159  Q
    |||| |||||||||||||| |||||||| |||||||| ||||    
T  2486332 tggacagaaactgttttgagacgagggagagagacctaaaac 2486373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 72 - 155
Target Start/End: Original strand, 2536564 - 2536647
Alignment:
Q  72 attgttgcctcggagattttgaccaagaatcgaagacggttggtgatggagagaaactgttttgaaacgagggaaagagacctg 155  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |||||||||    
T  2536564 attgttgcctcggagattttgaccaagaatcgaagaaggttggtgatggacagaaactgttttgaaatgagggagagagacctg 2536647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 2519161 - 2519279
Alignment:
Q  21 ttgagtgatgtaatattagggaacctttcaaagagacgattaaggaaagggattgttgcctcggagattttgaccaagaatcgaagacggttggtgatgg 120  Q
    |||||||||||||  || |||||||| ||||||||||||| ||||||||||||||||   || |||||| ||||  || |||||| ||||||||||||||    
T  2519161 ttgagtgatgtaacgttggggaacctatcaaagagacgatgaaggaaagggattgtttgatctgagattgtgactgaggatcgaaaacggttggtgatgg 2519260  T
Q  121 agagaaactgttttgaaac 139  Q
    | |||||||||||||||||    
T  2519261 acagaaactgttttgaaac 2519279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 2534240 - 2534300
Alignment:
Q  18 atattgagtgatgtaatattagggaacctttcaaagagacgattaaggaaagggattgttg 78  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  2534240 atattgagtgatgtaatattagggaacctttcaaagaggcggttaaggaaagggattgttg 2534300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 160
Target Start/End: Original strand, 2467470 - 2467597
Alignment:
Q  33 atattagggaacctttcaaagagacgattaaggaaagggattgttgcctcggagattttgaccaagaatcgaagacggttggtgatggagagaaactgtt 132  Q
    ||||| |||||||||||||||||||||| ||| |||||||||||| | ||||| ||   |||  |||||||||||| |||||| ||||| | ||||||||    
T  2467470 atattggggaacctttcaaagagacgatgaagtaaagggattgttccgtcggaaatcgagacggagaatcgaagactgttggtaatggacaaaaactgtt 2467569  T
Q  133 ttgaaacgagggaaagagacctgaaact 160  Q
    |||| |||| ||| |||||| |||||||    
T  2467570 ttgagacgacggagagagacttgaaact 2467597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 339
Target Start/End: Original strand, 2536651 - 2536737
Alignment:
Q  253 gaagaaggttgaatgtgttgttctcctcgtcgttgaggaatttgaaaatgtgttcccataaatcctctggtaaatttgaacgtgttg 339  Q
    |||||||| |||| |||||| | ||||||| |||||| |||||||| |||| ||||||||| ||||||||||||| |||||||||||    
T  2536651 gaagaaggctgaaggtgttgctgtcctcgtggttgagaaatttgaagatgtattcccataactcctctggtaaatatgaacgtgttg 2536737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 333
Target Start/End: Complemental strand, 2625348 - 2625296
Alignment:
Q  281 gtcgttgaggaatttgaaaatgtgttcccataaatcctctggtaaatttgaac 333  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||| |||||    
T  2625348 gtcgttgaggaatttgaagatgtgttcccataactcctctggtaaatctgaac 2625296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 339
Target Start/End: Original strand, 2491249 - 2491320
Alignment:
Q  268 tgttgttctcctcgtcgttgaggaatttgaaaatgtgttcccataaatcctctggtaaatttgaacgtgttg 339  Q
    ||||||| ||||||||||| ||||||||||  |||||||||||||| | ||||||||||  |||||||||||    
T  2491249 tgttgttgtcctcgtcgttcaggaatttgaggatgtgttcccataacttctctggtaaacatgaacgtgttg 2491320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 2621292 - 2621163
Alignment:
Q  21 ttgagtgatgtaatattagggaacctttcaaagagacgattaaggaaagggattgttgcctcggagattttgaccaagaatcgaagacggttggtgatgg 120  Q
    ||||| ||||| |||||||||||||| || ||||| |||  || ||||||||| |||   ||||||||| |||   |||| || ||||||||||||||||    
T  2621292 ttgagggatgtgatattagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatgg 2621193  T
Q  121 agagaaactgttttgaaacgagggaaagag 150  Q
    | | ||||||||| || |||||||| ||||    
T  2621192 acaaaaactgtttggatacgagggagagag 2621163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 2367731 - 2367678
Alignment:
Q  97 agaatcgaagacggttggtgatggagagaaactgttttgaaacgagggaaagag 150  Q
    ||||||| ||||||||||||||||||||||| ||||| || |||| ||||||||    
T  2367731 agaatcggagacggttggtgatggagagaaattgtttggagacgatggaaagag 2367678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 2477511 - 2477611
Alignment:
Q  36 ttagggaacctttcaaagagacgattaaggaaagggattgttgcctcggagattttgaccaagaatcgaagacggttggtgatggagagaaactgttttg 135  Q
    ||||||||||||| ||||||| ||| |||| ||||||| |||   ||||| ||| | ||  |||||||||||| |||||| ||||| ||||||| |||||    
T  2477511 ttagggaacctttgaaagagaggatgaagggaagggatggtttgatcggaaattgtcacagagaatcgaagactgttggttatggacagaaactcttttg 2477610  T
Q  136 a 136  Q
    |    
T  2477611 a 2477611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 2467679 - 2467738
Alignment:
Q  281 gtcgttgaggaatttgaaaatgtgttcccataaatcctctggtaaatttgaacgtgttgc 340  Q
    |||||||||||||||||| ||| | |||||||| |||| |||||||| ||||| ||||||    
T  2467679 gtcgttgaggaatttgaagatgcgctcccataactcctttggtaaatatgaacatgttgc 2467738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 5106380 - 5106330
Alignment:
Q  86 gattttgaccaagaatcgaagacggttggtgatggagagaaactgttttga 136  Q
    |||| ||||| |||||||| |||||||||||||||| | ||||||||||||    
T  5106380 gattgtgaccgagaatcgaggacggttggtgatggacaaaaactgttttga 5106330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 6007669 - 6007723
Alignment:
Q  97 agaatcgaagacggttggtgatggagagaaactgttttgaaacgagggaaagaga 151  Q
    ||||||| |||| ||||||||||||||| |||||||| || |||||||| |||||    
T  6007669 agaatcggagactgttggtgatggagaggaactgtttcgagacgagggagagaga 6007723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 5102005 - 5101944
Alignment:
Q  279 tcgtcgttgaggaatttgaaaatgtgttcccataaatcctctggtaaatttgaacgtgttgc 340  Q
    |||||||||||||||||||| ||| | |||||||| || || ||||||| ||||| ||||||    
T  5102005 tcgtcgttgaggaatttgaagatgcgctcccataactcatccggtaaatatgaacctgttgc 5101944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 2486430 - 2486510
Alignment:
Q  282 tcgttgaggaatttgaaaatgtgttcccataaatcctctggtaaatttgaacgtgttgcttctgtttctgttcccattttt 362  Q
    |||||||||||||| || ||  | |||||||| |||||||| ||||  || | ||||||||||||| ||||| ||||||||    
T  2486430 tcgttgaggaatttaaagattcgctcccataattcctctgggaaatacgagcatgttgcttctgttgctgttgccattttt 2486510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 2519366 - 2519422
Alignment:
Q  277 cctcgtcgttgaggaatttgaaaatgtgttcccataaatcctctggtaaatttgaac 333  Q
    |||||||||||||||| |||| |||| | |||||||| ||||| ||||||| |||||    
T  2519366 cctcgtcgttgaggaacttgacaatgcgctcccataactcctccggtaaatatgaac 2519422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 12121049 - 12121013
Alignment:
Q  100 atcgaagacggttggtgatggagagaaactgttttga 136  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  12121049 atcgaagacggttggtgatggagaggaactgctttga 12121013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 2576512 - 2576415
Alignment:
Q  36 ttagggaacctttcaaagagacgattaaggaaagggattgttgcctcggagattttgaccaagaatcgaagacggttggtgatggagagaaactgttt 133  Q
    ||||||| |||||| ||||| |||  || ||||||||| |||   |||| |||| ||||| ||||||||||||| ||||||||||| | |||||||||    
T  2576512 ttagggatcctttcgaagaggcgacaaatgaaagggatggttcaatcggtgattgtgaccgagaatcgaagacgattggtgatggataaaaactgttt 2576415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 15091404 - 15091356
Alignment:
Q  103 gaagacggttggtgatggagagaaactgttttgaaacgagggaaagaga 151  Q
    |||||| ||||||||||||||| |||||||| || |||||||| |||||    
T  15091404 gaagactgttggtgatggagaggaactgtttggagacgagggagagaga 15091356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 32268774 - 32268810
Alignment:
Q  97 agaatcgaagacggttggtgatggagagaaactgttt 133  Q
    |||||||||||||||||||||||||||| ||||||||    
T  32268774 agaatcgaagacggttggtgatggagagtaactgttt 32268810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 41900311 - 41900257
Alignment:
Q  97 agaatcgaagacggttggtgatggagagaaactgttttgaaacgagggaaagaga 151  Q
    |||||||||||  |||||||||||||||||||||||| || ||||| || |||||    
T  41900311 agaatcgaagagtgttggtgatggagagaaactgtttggagacgagtgagagaga 41900257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 12846943 - 12846988
Alignment:
Q  100 atcgaagacggttggtgatggagagaaactgttttgaaacgaggga 145  Q
    |||| |||||||||||||||||||| ||||| || |||||||||||    
T  12846943 atcggagacggttggtgatggagaggaactgcttggaaacgaggga 12846988  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 15838018 - 15837982
Alignment:
Q  97 agaatcgaagacggttggtgatggagagaaactgttt 133  Q
    ||||||| |||||||||||||||||||||||||||||    
T  15838018 agaatcggagacggttggtgatggagagaaactgttt 15837982  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 33161437 - 33161491
Alignment:
Q  97 agaatcgaagacggttggtgatggagagaaactgttttgaaacgagggaaagaga 151  Q
    ||||||||||||  || |||||||||||||||||||| || |||||||| |||||    
T  33161437 agaatcgaagactattagtgatggagagaaactgtttggagacgagggatagaga 33161491  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 7555449 - 7555490
Alignment:
Q  109 ggttggtgatggagagaaactgttttgaaacgagggaaagag 150  Q
    |||||||||| |||||||||||||| ||||||||||| ||||    
T  7555449 ggttggtgatagagagaaactgtttggaaacgagggagagag 7555490  T

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Target: chr8 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 32152210 - 32152258
Alignment:
Q  97 agaatcgaagacggttggtgatggagagaaactgttttgaaacgaggga 145  Q
    ||||||| |||| ||||||||||||||| |||||||| || ||||||||    
T  32152210 agaatcggagactgttggtgatggagaggaactgtttggagacgaggga 32152258  T

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