View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20099_low_31 (Length: 275)
Name: NF20099_low_31
Description: NF20099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20099_low_31 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 13 - 259
Target Start/End: Original strand, 8494074 - 8494322
Alignment:
| Q |
13 |
aatatttaatatctagagccacgcacacatataatcaatttgcatatgcgaattttgtatatcataagagaggaagacgatacatcttcatccaaaatta |
112 |
Q |
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| T |
8494074 |
aatatttaatatctagagccacgcacacatatagtcaatttgcatatgcgaattttgtatatcataagagaggaaggcgatacatcttcatccaaaatta |
8494173 |
T |
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| Q |
113 |
attgagtatataatat--aaaacatttaacctatttataattaatttaggactaccactctctttcaaacccaacacgtaatcttcaaaggatgttgaag |
210 |
Q |
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| T |
8494174 |
gttgagtatataatatataaaacatttaacctatttataattaatttaggactaccactctctttcaaacccaacacgtaatcttcaaaggatgttgaag |
8494273 |
T |
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| Q |
211 |
tttgctcttttaactctccatagttgctaaaaaatcttggaaacaacgt |
259 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
8494274 |
tttgctcttttaactctccatagttgctaaaaaatattggaaacaacgt |
8494322 |
T |
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