View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20101_high_13 (Length: 213)
Name: NF20101_high_13
Description: NF20101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20101_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 1747508 - 1747319
Alignment:
| Q |
1 |
actagtcagacaaaaagaagtaatatgagagagaggtaaacaattatttccacaaccatatcatcttcccctcctctcgctttaagtctacacatttcaa |
100 |
Q |
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| T |
1747508 |
actagccagacaaaaagaagtaatatgagagagaggtgaacaattatttccacaaccatatcatcttcccctcctctcgctttaagtctacaaatttcaa |
1747409 |
T |
|
| Q |
101 |
gtacgtaactagttattattgtgaatttcattgtttcaacgttgcttatatgttgttaaatgttaattactactatttgtaatttgaaat |
190 |
Q |
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| T |
1747408 |
gtatgtaactagttattattgtgaatttcattgtttcaacgttgcttatatgttgttaaatgttaattactactatttgtaatttgaaat |
1747319 |
T |
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