View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20101_high_9 (Length: 249)
Name: NF20101_high_9
Description: NF20101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20101_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 40952618 - 40952841
Alignment:
| Q |
18 |
atttgtatcaaccttctccaccagagtaaggacgagggatgtccatttttccatagaagcaagattttcttcaaattttgacaattatcttctacatcag |
117 |
Q |
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| T |
40952618 |
atttgtatcaaccttctccaccagagtaaggacgagggatgtccatttttccatagaagcaagattttcttcaaattttgacaattatcttctacatcag |
40952717 |
T |
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| Q |
118 |
aatcaaattaggtgaagactttcatataccaagaatagtttatgaaatattatccattaatctgtttct----ctaacaactgcaccatggttttttatt |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
40952718 |
aatcaaattaggtgaagactttcatataccaagaatagtttatgaaatattatccattaatctgtttctctagctaacaactgcaccatggttttttatt |
40952817 |
T |
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| Q |
214 |
tattcttcttaactgcgcaatatt |
237 |
Q |
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|||||||||||||||||||||||| |
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| T |
40952818 |
tattcttcttaactgcgcaatatt |
40952841 |
T |
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