View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20101_low_8 (Length: 259)
Name: NF20101_low_8
Description: NF20101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20101_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 25931075 - 25930833
Alignment:
| Q |
1 |
aaatagttgtttggttaaatcttgaagttgttccaaaagggttattggaacaccatgattaatcaaacggaatagaccccattccttgcaagcctcatcc |
100 |
Q |
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| T |
25931075 |
aaatagttgtttggttaaatcttgaagttgttccaaaagggttattggaacaccatgattaatcaaacggaatagaccccattccttgcaagcctcatcc |
25930976 |
T |
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| Q |
101 |
aaatttttgtgttctaagcacttaagatctatgattggaataggatctgagtcttcaattgtgtcatttgggtcataagggttttgttgttggttgtttt |
200 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
25930975 |
aaatttttgtgttctaagcacttaagatctatggttggaataggatctgagtcttcaattgtgtcatttggttcataagggttttgttgttggttgtttt |
25930876 |
T |
|
| Q |
201 |
gttggcggagaattggagggtaggaatccaagttgttcatttt |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25930875 |
gttggcggagaattggagggtaggaatccaagttgttcatttt |
25930833 |
T |
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