View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20103_high_8 (Length: 378)

Name: NF20103_high_8
Description: NF20103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20103_high_8
NF20103_high_8
[»] chr7 (52 HSPs)
chr7 (158-370)||(43444354-43444565)
chr7 (32-125)||(39458527-39458620)
chr7 (177-264)||(17889518-17889605)
chr7 (146-264)||(17888532-17888650)
chr7 (182-251)||(17890406-17890475)
chr7 (66-104)||(44941430-44941468)
chr7 (62-100)||(5833052-5833090)
chr7 (155-217)||(48626817-48626878)
chr7 (67-100)||(26816682-26816715)
chr7 (68-104)||(29461840-29461876)
chr7 (147-203)||(43443501-43443557)
chr7 (66-104)||(2916108-2916146)
chr7 (66-100)||(16537553-16537587)
chr7 (66-100)||(16628075-16628109)
chr7 (66-104)||(19599151-19599189)
chr7 (66-104)||(21322181-21322219)
chr7 (66-104)||(21554951-21554989)
chr7 (62-104)||(21751639-21751681)
chr7 (66-104)||(22991408-22991446)
chr7 (66-104)||(23413063-23413101)
chr7 (66-104)||(25923397-25923435)
chr7 (66-104)||(27263347-27263385)
chr7 (66-104)||(27270241-27270279)
chr7 (66-104)||(37230045-37230083)
chr7 (70-104)||(40187657-40187691)
chr7 (66-104)||(44454518-44454556)
chr7 (68-105)||(4346666-4346703)
chr7 (62-99)||(7476737-7476774)
chr7 (66-99)||(10467133-10467166)
chr7 (71-104)||(21164780-21164813)
chr7 (63-104)||(22267587-22267628)
chr7 (66-99)||(34773242-34773275)
chr7 (66-119)||(47342451-47342504)
chr7 (67-104)||(48837873-48837910)
chr7 (64-104)||(1285084-1285124)
chr7 (68-104)||(3766820-3766856)
chr7 (65-105)||(4340132-4340172)
chr7 (68-104)||(9712223-9712259)
chr7 (64-100)||(9819564-9819600)
chr7 (64-100)||(10721489-10721525)
chr7 (64-100)||(14046626-14046662)
chr7 (64-100)||(14356656-14356692)
chr7 (68-104)||(15106716-15106752)
chr7 (64-104)||(18223738-18223778)
chr7 (64-100)||(18505672-18505708)
chr7 (64-100)||(24991791-24991827)
chr7 (68-104)||(28800046-28800082)
chr7 (68-104)||(29625930-29625966)
chr7 (68-104)||(38889518-38889554)
chr7 (64-100)||(39801716-39801752)
chr7 (146-190)||(45223769-45223813)
chr7 (68-104)||(48288426-48288462)
[»] chr4 (49 HSPs)
chr4 (146-266)||(46514885-46515005)
chr4 (146-267)||(46514196-46514317)
chr4 (261-370)||(2905388-2905500)
chr4 (146-242)||(16897598-16897694)
chr4 (201-264)||(53523703-53523766)
chr4 (146-264)||(44817729-44817847)
chr4 (157-264)||(33352899-33353006)
chr4 (66-104)||(20096287-20096325)
chr4 (66-104)||(21318270-21318308)
chr4 (66-116)||(41520948-41520998)
chr4 (66-100)||(50442764-50442798)
chr4 (66-104)||(55430602-55430640)
chr4 (64-100)||(8027412-8027448)
chr4 (64-100)||(8494997-8495033)
chr4 (64-104)||(14197446-14197486)
chr4 (66-100)||(2649750-2649784)
chr4 (66-100)||(4360661-4360695)
chr4 (66-104)||(13276135-13276173)
chr4 (62-104)||(13304117-13304159)
chr4 (66-104)||(17423194-17423232)
chr4 (66-104)||(19908698-19908736)
chr4 (66-100)||(20799411-20799445)
chr4 (62-104)||(24063221-24063263)
chr4 (66-104)||(25783157-25783195)
chr4 (66-104)||(29908062-29908100)
chr4 (70-100)||(32006510-32006540)
chr4 (66-104)||(38374963-38375001)
chr4 (66-100)||(38416067-38416101)
chr4 (66-104)||(43034359-43034397)
chr4 (66-100)||(50362156-50362190)
chr4 (66-100)||(53190305-53190339)
chr4 (66-104)||(56204953-56204991)
chr4 (66-99)||(21623436-21623469)
chr4 (63-104)||(23225871-23225912)
chr4 (68-105)||(41897572-41897609)
chr4 (67-104)||(54151643-54151680)
chr4 (68-104)||(3036080-3036116)
chr4 (68-104)||(12167641-12167677)
chr4 (68-104)||(13578490-13578526)
chr4 (64-100)||(19854575-19854611)
chr4 (66-98)||(23775530-23775562)
chr4 (66-94)||(33758821-33758849)
chr4 (64-100)||(33900739-33900775)
chr4 (64-100)||(38812864-38812900)
chr4 (64-100)||(43155089-43155125)
chr4 (64-104)||(45970722-45970762)
chr4 (66-102)||(48067141-48067177)
chr4 (68-104)||(52798287-52798323)
chr4 (68-104)||(56479251-56479287)
[»] chr1 (50 HSPs)
chr1 (154-297)||(13259614-13259756)
chr1 (157-264)||(26778866-26778973)
chr1 (157-267)||(29117386-29117496)
chr1 (157-266)||(29116709-29116818)
chr1 (158-264)||(13258964-13259071)
chr1 (158-264)||(27773239-27773345)
chr1 (157-264)||(1170039-1170147)
chr1 (66-104)||(19396208-19396246)
chr1 (182-264)||(28677229-28677311)
chr1 (64-104)||(12852217-12852257)
chr1 (64-104)||(24631845-24631885)
chr1 (68-104)||(41972749-41972785)
chr1 (66-104)||(2889943-2889981)
chr1 (62-104)||(30248060-30248102)
chr1 (66-104)||(47719124-47719162)
chr1 (67-104)||(12212301-12212338)
chr1 (64-104)||(29042543-29042583)
chr1 (62-105)||(37014192-37014235)
chr1 (65-104)||(40618916-40618955)
chr1 (66-104)||(1854275-1854313)
chr1 (66-100)||(9872122-9872156)
chr1 (66-100)||(21400040-21400074)
chr1 (66-104)||(28039877-28039915)
chr1 (66-104)||(29800539-29800577)
chr1 (70-104)||(30678834-30678868)
chr1 (66-104)||(32497498-32497536)
chr1 (70-104)||(33153901-33153935)
chr1 (70-104)||(41573290-41573324)
chr1 (66-100)||(41763172-41763206)
chr1 (66-104)||(44732642-44732680)
chr1 (64-94)||(46579664-46579694)
chr1 (66-104)||(49868017-49868055)
chr1 (66-104)||(49875616-49875654)
chr1 (67-104)||(1408441-1408478)
chr1 (67-104)||(3431336-3431373)
chr1 (67-104)||(5270758-5270795)
chr1 (67-104)||(18056734-18056771)
chr1 (63-100)||(26674406-26674443)
chr1 (66-99)||(27533254-27533287)
chr1 (67-104)||(29935989-29936026)
chr1 (66-99)||(41974772-41974805)
chr1 (66-103)||(48264488-48264525)
chr1 (68-104)||(10356202-10356238)
chr1 (64-104)||(25365011-25365051)
chr1 (64-104)||(26256104-26256144)
chr1 (68-104)||(26550503-26550539)
chr1 (64-104)||(31060222-31060262)
chr1 (68-104)||(33229701-33229737)
chr1 (68-104)||(40634210-40634246)
chr1 (68-104)||(42735890-42735926)
[»] chr2 (39 HSPs)
chr2 (157-264)||(28020777-28020884)
chr2 (157-251)||(28020104-28020198)
chr2 (182-234)||(33045119-33045171)
chr2 (66-104)||(27152359-27152397)
chr2 (66-104)||(5168596-5168634)
chr2 (66-104)||(31815904-31815942)
chr2 (64-104)||(18324909-18324949)
chr2 (64-104)||(22359011-22359051)
chr2 (64-100)||(31156823-31156859)
chr2 (64-100)||(45032703-45032739)
chr2 (65-104)||(32609209-32609248)
chr2 (65-104)||(39408712-39408751)
chr2 (66-104)||(2256977-2257015)
chr2 (66-100)||(3197096-3197130)
chr2 (66-104)||(4897549-4897587)
chr2 (66-104)||(4944943-4944981)
chr2 (66-104)||(7772477-7772515)
chr2 (66-104)||(20239349-20239387)
chr2 (66-100)||(20565092-20565126)
chr2 (66-104)||(22267519-22267557)
chr2 (66-100)||(24592863-24592897)
chr2 (66-104)||(25395459-25395497)
chr2 (66-104)||(26133537-26133575)
chr2 (66-104)||(27935062-27935100)
chr2 (70-104)||(28644531-28644565)
chr2 (70-104)||(29809332-29809366)
chr2 (66-104)||(34977210-34977248)
chr2 (71-104)||(13922654-13922687)
chr2 (67-104)||(15462883-15462920)
chr2 (63-104)||(18789421-18789462)
chr2 (64-117)||(18881176-18881229)
chr2 (67-104)||(33041887-33041924)
chr2 (66-102)||(961111-961147)
chr2 (64-100)||(10195677-10195713)
chr2 (66-118)||(11560490-11560542)
chr2 (68-104)||(24581489-24581525)
chr2 (64-100)||(28771592-28771628)
chr2 (68-104)||(37352518-37352554)
chr2 (68-104)||(43146361-43146397)
[»] scaffold0091 (1 HSPs)
scaffold0091 (187-264)||(3581-3658)
[»] chr8 (39 HSPs)
chr8 (157-264)||(33181063-33181170)
chr8 (157-264)||(526795-526902)
chr8 (66-105)||(13105099-13105138)
chr8 (66-104)||(7553685-7553723)
chr8 (66-104)||(15079169-15079207)
chr8 (66-104)||(37999437-37999475)
chr8 (67-104)||(989595-989632)
chr8 (68-100)||(18942928-18942960)
chr8 (64-100)||(23816800-23816836)
chr8 (66-104)||(6447195-6447233)
chr8 (66-104)||(8442504-8442542)
chr8 (66-104)||(8984511-8984549)
chr8 (66-100)||(11708996-11709030)
chr8 (66-104)||(13357458-13357496)
chr8 (66-104)||(18959155-18959193)
chr8 (62-104)||(24212169-24212211)
chr8 (66-104)||(26799190-26799228)
chr8 (66-100)||(29908021-29908055)
chr8 (66-100)||(33451366-33451400)
chr8 (66-100)||(39821894-39821928)
chr8 (63-104)||(10601769-10601810)
chr8 (70-103)||(31511978-31512011)
chr8 (157-262)||(33180913-33181017)
chr8 (67-100)||(34968565-34968598)
chr8 (67-100)||(37938505-37938538)
chr8 (67-104)||(42575980-42576017)
chr8 (68-104)||(7388464-7388500)
chr8 (68-104)||(8034437-8034473)
chr8 (68-104)||(10083172-10083208)
chr8 (68-104)||(13406609-13406645)
chr8 (64-100)||(15572161-15572197)
chr8 (68-100)||(25163189-25163221)
chr8 (68-104)||(31450982-31451018)
chr8 (68-104)||(33617981-33618017)
chr8 (68-104)||(34472306-34472342)
chr8 (66-114)||(37141353-37141401)
chr8 (68-104)||(37717372-37717408)
chr8 (68-104)||(38344058-38344094)
chr8 (68-104)||(41458304-41458340)
[»] chr3 (49 HSPs)
chr3 (157-242)||(42933479-42933564)
chr3 (64-104)||(35126284-35126324)
chr3 (64-104)||(10922323-10922363)
chr3 (66-104)||(552180-552218)
chr3 (64-104)||(17588368-17588408)
chr3 (64-104)||(51882215-51882255)
chr3 (65-104)||(376652-376691)
chr3 (66-105)||(16663253-16663292)
chr3 (64-99)||(25016363-25016398)
chr3 (66-104)||(2078246-2078284)
chr3 (66-104)||(3176990-3177028)
chr3 (70-104)||(7464512-7464546)
chr3 (66-104)||(7738675-7738713)
chr3 (66-100)||(7974529-7974563)
chr3 (66-104)||(12976619-12976657)
chr3 (66-104)||(14771337-14771375)
chr3 (66-100)||(18870742-18870776)
chr3 (66-104)||(19468457-19468495)
chr3 (66-104)||(21914088-21914126)
chr3 (62-104)||(22486689-22486731)
chr3 (66-104)||(24145404-24145442)
chr3 (66-104)||(38130976-38131014)
chr3 (66-104)||(42401438-42401476)
chr3 (66-100)||(45431958-45431992)
chr3 (66-104)||(46226094-46226132)
chr3 (66-100)||(48315041-48315075)
chr3 (66-100)||(48511260-48511294)
chr3 (66-104)||(52992082-52992120)
chr3 (70-104)||(53633638-53633672)
chr3 (67-104)||(1757687-1757724)
chr3 (66-119)||(2662083-2662136)
chr3 (71-104)||(7617705-7617738)
chr3 (67-104)||(19126555-19126592)
chr3 (67-100)||(36431819-36431852)
chr3 (67-100)||(37921016-37921049)
chr3 (67-104)||(38094635-38094672)
chr3 (66-99)||(51469828-51469861)
chr3 (67-99)||(759612-759644)
chr3 (68-104)||(4200610-4200646)
chr3 (64-100)||(8113577-8113613)
chr3 (68-104)||(11436513-11436549)
chr3 (64-104)||(19883093-19883133)
chr3 (64-100)||(39216361-39216397)
chr3 (68-104)||(44364030-44364066)
chr3 (68-104)||(48234472-48234508)
chr3 (68-104)||(52309135-52309171)
chr3 (68-104)||(52974078-52974114)
chr3 (68-104)||(53432762-53432798)
chr3 (68-100)||(55066619-55066651)
[»] chr5 (42 HSPs)
chr5 (66-100)||(11017186-11017220)
chr5 (66-104)||(11720900-11720938)
chr5 (66-104)||(20258551-20258589)
chr5 (66-104)||(33654754-33654792)
chr5 (67-104)||(2642781-2642818)
chr5 (67-104)||(31198715-31198752)
chr5 (64-104)||(17046340-17046380)
chr5 (63-99)||(41417774-41417810)
chr5 (64-103)||(3389169-3389208)
chr5 (61-100)||(13044449-13044488)
chr5 (61-100)||(13114447-13114486)
chr5 (65-104)||(40091486-40091525)
chr5 (62-104)||(3156540-3156582)
chr5 (66-104)||(5107262-5107300)
chr5 (66-104)||(5974242-5974280)
chr5 (66-100)||(6489017-6489051)
chr5 (66-104)||(11647203-11647241)
chr5 (66-100)||(15889421-15889455)
chr5 (66-100)||(19068456-19068490)
chr5 (66-100)||(20211290-20211324)
chr5 (66-100)||(20370147-20370181)
chr5 (66-104)||(22498948-22498986)
chr5 (66-104)||(31545877-31545915)
chr5 (66-100)||(34436861-34436895)
chr5 (66-104)||(38495148-38495186)
chr5 (66-104)||(41650956-41650994)
chr5 (66-104)||(43108575-43108613)
chr5 (67-100)||(5485196-5485229)
chr5 (63-104)||(6237733-6237774)
chr5 (67-100)||(17861989-17862022)
chr5 (67-104)||(40056608-40056645)
chr5 (68-104)||(546811-546847)
chr5 (68-104)||(2362978-2363014)
chr5 (68-104)||(5900301-5900337)
chr5 (68-104)||(6414077-6414113)
chr5 (68-104)||(10241734-10241770)
chr5 (64-100)||(16094067-16094103)
chr5 (63-99)||(16752516-16752552)
chr5 (68-100)||(19985513-19985545)
chr5 (64-104)||(31877934-31877974)
chr5 (68-104)||(33736039-33736075)
chr5 (68-100)||(33952799-33952831)
[»] chr6 (20 HSPs)
chr6 (66-117)||(2726434-2726485)
chr6 (66-104)||(331903-331941)
chr6 (62-104)||(3373394-3373436)
chr6 (66-104)||(9977063-9977101)
chr6 (66-100)||(10780124-10780158)
chr6 (66-104)||(13732821-13732859)
chr6 (66-104)||(16403975-16404013)
chr6 (66-100)||(30639443-30639477)
chr6 (66-104)||(31971535-31971573)
chr6 (67-104)||(4922426-4922463)
chr6 (66-99)||(8637454-8637487)
chr6 (67-104)||(32524438-32524475)
chr6 (68-104)||(361172-361208)
chr6 (68-104)||(361760-361796)
chr6 (66-102)||(8916491-8916527)
chr6 (68-104)||(27094832-27094868)
chr6 (68-104)||(28222872-28222908)
chr6 (68-104)||(28237277-28237313)
chr6 (68-104)||(30938397-30938433)
chr6 (68-104)||(31802062-31802098)
[»] scaffold1160 (1 HSPs)
scaffold1160 (66-104)||(1729-1767)
[»] scaffold0238 (1 HSPs)
scaffold0238 (66-104)||(25395-25433)
[»] scaffold0182 (1 HSPs)
scaffold0182 (66-104)||(17788-17826)
[»] scaffold0126 (1 HSPs)
scaffold0126 (66-104)||(34905-34943)
[»] scaffold0161 (1 HSPs)
scaffold0161 (71-104)||(26704-26737)
[»] scaffold0007 (1 HSPs)
scaffold0007 (67-100)||(221031-221064)
[»] scaffold0690 (1 HSPs)
scaffold0690 (68-104)||(3675-3711)
[»] scaffold0533 (1 HSPs)
scaffold0533 (64-104)||(8866-8906)
[»] scaffold0122 (1 HSPs)
scaffold0122 (64-100)||(31170-31206)
[»] scaffold0038 (2 HSPs)
scaffold0038 (68-104)||(23370-23406)
scaffold0038 (68-104)||(37439-37475)
[»] scaffold0028 (1 HSPs)
scaffold0028 (68-104)||(112117-112153)


Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 158 - 370
Target Start/End: Complemental strand, 43444565 - 43444354
Alignment:
Q  158 tgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataacatg 257  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43444565 tgagaatgacttctttatttgagaatgtgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataacatg 43444466  T
Q  258 gaccatcgctgccttctttttatcaccaggttctaacacagctcccaaacctgcctctacgtttcttcttcttctcaccgggaaccatcctttctcagcc 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  43444465 gaccatcgctgccttctttttatcaccaggttctaacacagctcccaaacctgcctctacgtttcttcttcttctcaccggg-accatcctttctcaacc 43444367  T
Q  358 ttcttttcatctc 370  Q
    |||||||||||||    
T  43444366 ttcttttcatctc 43444354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 39458527 - 39458620
Alignment:
Q  32 gtgtggtcggggtttgaacccaaactaggaaaatcttgcatatattatgcattatccctaccaactgagttaatattatgaggactattgaagt 125  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39458527 gtgtggtcggggtttgaacccaaaccaggaaaatcttgcatatattatgcattatccctaccaactgagttaatattatgaggactattgaagt 39458620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 264
Target Start/End: Original strand, 17889518 - 17889605
Alignment:
Q  177 tgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataacatggaccatc 264  Q
    |||||||||||||||||||| ||| ||||| ||||||||||| | ||||||||||||||||||||| | |||||| |  |||||||||    
T  17889518 tgagaatatgagaatacattatcagcccttcagattaaaatggagggcttagatttaatgtaccaataaaaacatcatgtggaccatc 17889605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 146 - 264
Target Start/End: Original strand, 17888532 - 17888650
Alignment:
Q  146 ggatgtatcatgtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaat 245  Q
    |||||||||  |||||||||||||| |||| ||||||| |||||||||||| | | || || ||||||||||| | | ||||||||||||||||||| |     
T  17888532 ggatgtatccagtgagaatgacttccttatatgagaatgtgagaatacattattagccattcagattaaaatggaggacttagatttaatgtaccaataa 17888631  T
Q  246 aaacataacatggaccatc 264  Q
    |||||| | || |||||||    
T  17888632 aaacatcatatagaccatc 17888650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 17890475 - 17890406
Alignment:
Q  182 atatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacat 251  Q
    ||||||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||| | ||||||    
T  17890475 atatgagaatacattatcaacccttcagattaaaatggagggcttagatttaatgtaccaataaaaacat 17890406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 44941430 - 44941468
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44941430 cttgcatatattatgcattatccctaccaactgagttaa 44941468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 5833090 - 5833052
Alignment:
Q  62 aaatcttgcatatattatgcattatccctaccaactgag 100  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  5833090 aaatattgcatatattatgcattatccctaccaactgag 5833052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 48626878 - 48626817
Alignment:
Q  155 atgtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaat 217  Q
    ||||||||||||||||||||| ||||||| |||||||||||| | || |||||| ||||||||    
T  48626878 atgtgagaatgacttctttatgtgagaatgtgagaatacattat-aagcctttatattaaaat 48626817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 26816682 - 26816715
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||||||||||||||||    
T  26816682 ttgcatatattatgcattatccctaccaactgag 26816715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 29461840 - 29461876
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||| |||||||||||||||||||    
T  29461840 tgcatatattatgcattgtccctaccaactgagttaa 29461876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 43443501 - 43443557
Alignment:
Q  147 gatgtatcatgtgagaatgacttctttatttgagaatatgagaatacattgtcaacc 203  Q
    |||||||||||||||||||||  |||||| ||||||| |||||||| ||| ||||||    
T  43443501 gatgtatcatgtgagaatgacaactttatatgagaatgtgagaatatattatcaacc 43443557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 2916146 - 2916108
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  2916146 cttgcatatattatgcattgtccgtaccaactgagttaa 2916108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 16537553 - 16537587
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    |||| ||||||||||||||||||||||||||||||    
T  16537553 cttgtatatattatgcattatccctaccaactgag 16537587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 16628109 - 16628075
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    |||| ||||||||||||||||||||||||||||||    
T  16628109 cttgtatatattatgcattatccctaccaactgag 16628075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 19599189 - 19599151
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  19599189 cttgcatatattatgcattgtccataccaactgagttaa 19599151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 21322219 - 21322181
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  21322219 cttgcatacattatgcattatccttaccaactgagttaa 21322181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 21554951 - 21554989
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  21554951 cttgcatatattaagcattatccctaccaactaagttaa 21554989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 21751639 - 21751681
Alignment:
Q  62 aaatcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||| | |||||||||| ||||||    
T  21751639 aaatcttgcatatattatgcatttttcctaccaactaagttaa 21751681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 22991408 - 22991446
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  22991408 cttgcatatattatgcattgtccataccaactgagttaa 22991446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 23413063 - 23413101
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  23413063 cttgcatatattatgcattgtccataccaactgagttaa 23413101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 25923435 - 25923397
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  25923435 cttgcatatattatgcattatccctactaactgatttaa 25923397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 27263385 - 27263347
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  27263385 cttgcatatattatgcattgtccataccaactgagttaa 27263347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 27270279 - 27270241
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  27270279 cttgcatatattatgcattgtccataccaactgagttaa 27270241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 37230045 - 37230083
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  37230045 cttgcatatattatgcattttccttaccaactgagttaa 37230083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 40187657 - 40187691
Alignment:
Q  70 catatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||| |||||||||||||||||||    
T  40187657 catatattatgcattgtccctaccaactgagttaa 40187691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 44454556 - 44454518
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  44454556 cttgcatattttatgcattgtccctaccaactgagttaa 44454518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 4346703 - 4346666
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaat 105  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  4346703 tgcatatattatgcattgtccctaccaactgagctaat 4346666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 7476774 - 7476737
Alignment:
Q  62 aaatcttgcatatattatgcattatccctaccaactga 99  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  7476774 aaatcttgcatatattgtgcattgtccctaccaactga 7476737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 10467133 - 10467166
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactga 99  Q
    |||||| |||||||||||||||||||||||||||    
T  10467133 cttgcaaatattatgcattatccctaccaactga 10467166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 21164780 - 21164813
Alignment:
Q  71 atatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||| |||||||||||||||    
T  21164780 atatattatgcattatccataccaactgagttaa 21164813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 22267628 - 22267587
Alignment:
Q  63 aatcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||| ||||||||||||||| || ||||||||||||||||    
T  22267628 aatcttacatatattatgcattgtctctaccaactgagttaa 22267587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 34773275 - 34773242
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactga 99  Q
    ||||||||||||||||||| ||||||||||||||    
T  34773275 cttgcatatattatgcattgtccctaccaactga 34773242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 47342451 - 47342504
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaatattatgaggactat 119  Q
    ||||||||||||||||||| |||  ||||||||||||||  | |||||||||||    
T  47342451 cttgcatatattatgcattgtccaaaccaactgagttaagctcatgaggactat 47342504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 48837910 - 48837873
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  48837910 ttgcatatattatgcattatccataccaattgagttaa 48837873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 1285084 - 1285124
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| | |||| ||||||||||||    
T  1285084 atcttgcatatattatgcattgttcctatcaactgagttaa 1285124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 3766856 - 3766820
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  3766856 tgcatataatatgcaatatccctaccaactgagttaa 3766820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 4340172 - 4340132
Alignment:
Q  65 tcttgcatatattatgcattatccctaccaactgagttaat 105  Q
    |||||||||||||||||||| ||| ||||||||||| ||||    
T  4340172 tcttgcatatattatgcattgtccttaccaactgagctaat 4340132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 9712223 - 9712259
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  9712223 tgcatataatatgcaatatccctaccaactgagttaa 9712259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 9819564 - 9819600
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||| | |||||||||||||    
T  9819564 atcttgcatatattatgcattgttcctaccaactgag 9819600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 10721489 - 10721525
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||| | |||||||||||||    
T  10721489 atcttgcatatattatgcattgttcctaccaactgag 10721525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 14046626 - 14046662
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    |||||||||||||||||||||| || |||||||||||    
T  14046626 atcttgcatatattatgcattacccataccaactgag 14046662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 14356656 - 14356692
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    |||||||||||||||||||||| || |||||||||||    
T  14356656 atcttgcatatattatgcattacccataccaactgag 14356692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 15106716 - 15106752
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  15106716 tgcatataatatgcaatatccctaccaactgagttaa 15106752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 18223738 - 18223778
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||| |||||| |||||| |||||||||||||||||||||    
T  18223738 atcttacatataatatgcaatatccctaccaactgagttaa 18223778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 18505672 - 18505708
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  18505672 atcttgcatattttatgcattgtccctaccaactgag 18505708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 24991827 - 24991791
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  24991827 atcttgcatatattatgcattgtccttaccaactgag 24991791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 28800046 - 28800082
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||| |||||||||| |||||||||||||||||||    
T  28800046 tgcataaattatgcattgtccctaccaactgagttaa 28800082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 29625966 - 29625930
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  29625966 tgcatataatatgcaatatccctaccaactgagttaa 29625930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 38889518 - 38889554
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  38889518 tgcatataatatgcaatatccctaccaactgagttaa 38889554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 39801752 - 39801716
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  39801752 atcttgcatatattatgcattgtccataccaactgag 39801716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 45223769 - 45223813
Alignment:
Q  146 ggatgtatcatgtgagaatgacttctttatttgagaatatgagaa 190  Q
    ||||||||||||||||||||||  |||||| ||||||| ||||||    
T  45223769 ggatgtatcatgtgagaatgacaactttatatgagaatgtgagaa 45223813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 48288426 - 48288462
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  48288426 tgcatataatatgcaatatccctaccaactgagttaa 48288462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 266
Target Start/End: Complemental strand, 46515005 - 46514885
Alignment:
Q  146 ggatgtatcatgtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaat 245  Q
    ||||||||||  ||||||||||||  |||| ||||||| |||||||||| | ||| ||||||||||||||||||||||||||||||||| || |||||||    
T  46515005 ggatgtatcacatgagaatgactttgttatatgagaatgtgagaatacaatatcagccctttagattaaaatgaaaggcttagatttaaagttccaaaat 46514906  T
Q  246 aaacataacatggaccatcgc 266  Q
    |||||| |  |||||||||||    
T  46514905 aaacatcaggtggaccatcgc 46514885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 267
Target Start/End: Original strand, 46514196 - 46514317
Alignment:
Q  146 ggatgtatcatgtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaat 245  Q
    ||||||||||  ||||||||||||  |||| ||||||| |||||||||| | ||| ||||||||||||||||||||| ||||||||||| || |||||||    
T  46514196 ggatgtatcacatgagaatgactttgttatatgagaatgtgagaatacaatatcagccctttagattaaaatgaaagacttagatttaaagttccaaaat 46514295  T
Q  246 aaacataacatggaccatcgct 267  Q
    |||||| |  ||||||||||||    
T  46514296 aaacatcaggtggaccatcgct 46514317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 261 - 370
Target Start/End: Complemental strand, 2905500 - 2905388
Alignment:
Q  261 catcgctgccttctttttatcaccaggttctaacacagctcccaaacctgcctctacgtttcttcttcttctcaccgggaaccatcctttctca-----g 355  Q
    ||||||||||||||||| ||| ||| |||||||||||    |||||||||||||||||||||||||||||||||||| | |||| |||||||||     |    
T  2905500 catcgctgccttcttttcatctccatgttctaacaca-aaaccaaacctgcctctacgtttcttcttcttctcaccgtg-accaccctttctcatcgctg 2905403  T
Q  356 ccttcttttcatctc 370  Q
    |||||||||||||||    
T  2905402 ccttcttttcatctc 2905388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 16897598 - 16897694
Alignment:
Q  146 ggatgtatcatgtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaa 242  Q
    |||||||||  ||||||||||||||  ||| ||||||| |||||||||||| |   ||||| ||||||||||| | |||||||||||||||||||||    
T  16897598 ggatgtatctagtgagaatgacttccgtatgtgagaatgtgagaatacattatttgcccttcagattaaaatggagggcttagatttaatgtaccaa 16897694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 53523766 - 53523703
Alignment:
Q  201 accctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataacatggaccatc 264  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||||||||| || |||||||||    
T  53523766 accctttagatttaaatgaaagacttagatttaaagtaccaaaataaacattacgtggaccatc 53523703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 264
Target Start/End: Original strand, 44817729 - 44817847
Alignment:
Q  146 ggatgtatcatgtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaat 245  Q
    |||||||||  |||||||||||||| |||| ||||||| |||||||||||| | | || || ||||||||||| | | ||| ||||||||||||||| |     
T  44817729 ggatgtatccagtgagaatgacttccttatatgagaatgtgagaatacattattagccattcagattaaaatggaggacttggatttaatgtaccaataa 44817828  T
Q  246 aaacataacatggaccatc 264  Q
    |||||| | || |||||||    
T  44817829 aaacatcatatagaccatc 44817847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 264
Target Start/End: Complemental strand, 33353006 - 33352899
Alignment:
Q  157 gtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataacat 256  Q
    |||||||||||||  |||| ||||||| |||||||| |||  ||  | ||||||||||||||||||| ||||||||||||| |||| | || ||| || |    
T  33353006 gtgagaatgactttcttatatgagaatgtgagaatatattaacagtcatttagattaaaatgaaaggtttagatttaatgttccaataaaagcatcacgt 33352907  T
Q  257 ggaccatc 264  Q
    ||||||||    
T  33352906 ggaccatc 33352899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 20096287 - 20096325
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20096287 cttgcatatattatgcattatccctaccaactgagttaa 20096325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 21318270 - 21318308
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  21318270 cttgcatatattatgcattgtccctaccaactgagttaa 21318308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 41520998 - 41520948
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaatattatgaggac 116  Q
    ||||||||||||||||||| || ||||||||||||||||  ||||||||||    
T  41520998 cttgcatatattatgcattgtctctaccaactgagttaagcttatgaggac 41520948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 50442764 - 50442798
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  50442764 cttgcatatattatgcattatccctaccaactgag 50442798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 55430640 - 55430602
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  55430640 cttgcatatattatgcattattcctaccaactgagttaa 55430602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 8027412 - 8027448
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||||||| |||||||||||    
T  8027412 atcttgcatatattatgcattatccttaccaactgag 8027448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 8495033 - 8494997
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||| |||||||||||||||    
T  8495033 atcttgcatatattatgcattgtccctaccaactgag 8494997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 14197446 - 14197486
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  14197446 atcttacatatattatgcattgtccctaccaactgagttaa 14197486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 2649750 - 2649784
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  2649750 cttgcatatattatgcattgtccctaccaactgag 2649784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 4360661 - 4360695
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    |||||||||||||||||| ||||||||||||||||    
T  4360661 cttgcatatattatgcatcatccctaccaactgag 4360695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 13276173 - 13276135
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  13276173 cttgcatatattatgcattgtccctaccaattgagttaa 13276135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 13304159 - 13304117
Alignment:
Q  62 aaatcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||||||| ||||||||||||||| |||||||    
T  13304159 aaatcttgtatatattatgtattatccctaccaaccgagttaa 13304117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 17423194 - 17423232
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  17423194 cttgcatatattatgcattgtctctaccaactgagttaa 17423232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 19908736 - 19908698
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  19908736 cttgcatatattatgcattgtccttaccaactgagttaa 19908698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 20799411 - 20799445
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  20799411 cttgcatatattatgcattgtccctaccaactgag 20799445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 24063221 - 24063263
Alignment:
Q  62 aaatcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||| || ||| ||||||||||||    
T  24063221 aaatcttgcatatattatgcattgtctctatcaactgagttaa 24063263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 25783195 - 25783157
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  25783195 cttgcatatactatgtattatccctaccaactgagttaa 25783157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 29908100 - 29908062
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  29908100 cttgcatatattatgcattgtccttaccaactgagttaa 29908062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 100
Target Start/End: Complemental strand, 32006540 - 32006510
Alignment:
Q  70 catatattatgcattatccctaccaactgag 100  Q
    |||||||||||||||||||||||||||||||    
T  32006540 catatattatgcattatccctaccaactgag 32006510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 38375001 - 38374963
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  38375001 cttgcatatattatgcattgtccctaccaactaagttaa 38374963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 38416101 - 38416067
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||||| |||||||||||    
T  38416101 cttgcatatattatgcattatccttaccaactgag 38416067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 43034359 - 43034397
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  43034359 cttgcatatattatgcattgtccataccaactgagttaa 43034397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 50362156 - 50362190
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  50362156 cttgcatatattatgcattgtccctaccaactgag 50362190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 53190339 - 53190305
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||||| |||||||||||    
T  53190339 cttgcatatattatgcattatccataccaactgag 53190305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 56204991 - 56204953
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  56204991 cttgcatatattatgcattgtccttaccaactgagttaa 56204953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 21623436 - 21623469
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactga 99  Q
    ||||||||||||||||||| ||||||||||||||    
T  21623436 cttgcatatattatgcattgtccctaccaactga 21623469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 23225912 - 23225871
Alignment:
Q  63 aatcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||| ||| | |||||||||||||||||    
T  23225912 aatcttgcatatattatgaattgttcctaccaactgagttaa 23225871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 41897572 - 41897609
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaat 105  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  41897572 tgcatatattatgcaatatccctaccaactaagttaat 41897609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 54151643 - 54151680
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  54151643 ttgcatatattatacattatccttaccaactgagttaa 54151680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 3036080 - 3036116
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  3036080 tgcatataatatgcaatatccctaccaactgagttaa 3036116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 12167641 - 12167677
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  12167641 tgcatataatatgcaatatccctaccaactgagttaa 12167677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 13578490 - 13578526
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  13578490 tgcatataatatgcaatatccctaccaactgagttaa 13578526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 19854611 - 19854575
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  19854611 atcttgcatatattatgcattgtccataccaactgag 19854575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 23775562 - 23775530
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactg 98  Q
    ||||||||||||||||||| |||||||||||||    
T  23775562 cttgcatatattatgcattgtccctaccaactg 23775530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 94
Target Start/End: Original strand, 33758821 - 33758849
Alignment:
Q  66 cttgcatatattatgcattatccctacca 94  Q
    |||||||||||||||||||||||||||||    
T  33758821 cttgcatatattatgcattatccctacca 33758849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 33900739 - 33900775
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  33900739 atcttgcatatattatgcattgtccttaccaactgag 33900775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 38812864 - 38812900
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  38812864 atcttgcatatattatgcattgtccctaccgactgag 38812900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 43155125 - 43155089
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||||||| || ||||||||    
T  43155125 atcttgcatatattatgcattatccataacaactgag 43155089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 45970722 - 45970762
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| |  ||||||||||||||||    
T  45970722 atcttgcatatattatgcattgtttctaccaactgagttaa 45970762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 48067177 - 48067141
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagtt 102  Q
    |||||||||||||| |||| |||||||||||||||||    
T  48067177 cttgcatatattatacattgtccctaccaactgagtt 48067141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 52798323 - 52798287
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  52798323 tgcatataatatgcaatatccctaccaactgagttaa 52798287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 56479251 - 56479287
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  56479251 tgcatataatatgcaatatccctaccaactgagttaa 56479287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 7e-28; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 154 - 297
Target Start/End: Complemental strand, 13259756 - 13259614
Alignment:
Q  154 catgtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataa 253  Q
    |||||||||||||||| ||||| ||||||| | |||||||| | ||| || |||||||||||||||||||||||||||||| || ||||||||||||| |    
T  13259756 catgtgagaatgacttttttatgtgagaatgtaagaatacaatatcagccttttagattaaaatgaaaggcttagatttaaagttccaaaataaacatca 13259657  T
Q  254 catggaccatcgctgccttctttttatcaccaggttctaacaca 297  Q
      ||||||||||||  ||||||||| || || ||||| ||||||    
T  13259656 ggtggaccatcgct-tcttctttttttctccgggttccaacaca 13259614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 157 - 264
Target Start/End: Original strand, 26778866 - 26778973
Alignment:
Q  157 gtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataacat 256  Q
    ||||||||||||| |||   ||||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  |    
T  26778866 gtgagaatgacttatttgcatgagaatgtgagaatgcattatcaaccctttagatttaaatgaaaggcttagatttaatgtaccaaaataaacattatgt 26778965  T
Q  257 ggaccatc 264  Q
    ||||||||    
T  26778966 ggaccatc 26778973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 157 - 267
Target Start/End: Complemental strand, 29117496 - 29117386
Alignment:
Q  157 gtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataacat 256  Q
    |||||||||| |||||||| ||||||| | |||||||| | ||| ||||||||||||||||||||||||||||||||| || |||||||||| ||||  |    
T  29117496 gtgagaatgatttctttatgtgagaatgtaagaatacaatatcagccctttagattaaaatgaaaggcttagatttaaagttccaaaataaatataaggt 29117397  T
Q  257 ggaccatcgct 267  Q
    |||||||||||    
T  29117396 ggaccatcgct 29117386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 157 - 266
Target Start/End: Original strand, 29116709 - 29116818
Alignment:
Q  157 gtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataacat 256  Q
    |||||||||| |||||||| ||||||| | |||||||| | ||| |||||||||||||||| |||||||||||||||| || ||||||||||||| |  |    
T  29116709 gtgagaatgatttctttatgtgagaatgtaagaatacaatatcagccctttagattaaaataaaaggcttagatttaaagttccaaaataaacatcaggt 29116808  T
Q  257 ggaccatcgc 266  Q
    ||||||||||    
T  29116809 ggaccatcgc 29116818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 13258964 - 13259071
Alignment:
Q  158 tgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaa-ggcttagatttaatgtaccaaaataaacataacat 256  Q
    |||||||||||||||||| ||||||| |||||||||| | |||  ||||||||||||||||||| ||||||||||||| || ||||||||||||| |  |    
T  13258964 tgagaatgacttctttatatgagaatgtgagaatacaatatcagtcctttagattaaaatgaaatggcttagatttaaagttccaaaataaacatcaggt 13259063  T
Q  257 ggaccatc 264  Q
    ||||||||    
T  13259064 ggaccatc 13259071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 27773239 - 27773345
Alignment:
Q  158 tgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataacatg 257  Q
    ||||||||||||  |||| ||||| | |||||||| ||| ||| ||||| ||||||||||||| |||||| |||||||||||||| | |||||| |||||    
T  27773239 tgagaatgactttcttatgtgagagtgtgagaatatattatcagcccttcagattaaaatgaagggcttaaatttaatgtaccaataaaaacatcacatg 27773338  T
Q  258 gaccatc 264  Q
    |||||||    
T  27773339 gaccatc 27773345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 264
Target Start/End: Complemental strand, 1170147 - 1170039
Alignment:
Q  157 gtgagaatgacttctttatttgagaat-atgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataaca 255  Q
    ||||||||| ||||||||| ||||||| ||||||||||||| | | || || ||||||||||| | | ||||||||||||||||||| | |||||| | |    
T  1170147 gtgagaatgtcttctttatgtgagaatgatgagaatacattattagccattcagattaaaatggaggacttagatttaatgtaccaataaaaacatcata 1170048  T
Q  256 tggaccatc 264  Q
    | |||||||    
T  1170047 tagaccatc 1170039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 19396208 - 19396246
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19396208 cttgcatatattatgcattatccctaccaactgagttaa 19396246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 28677229 - 28677311
Alignment:
Q  182 atatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataacatggaccatc 264  Q
    |||| |||||||||| |  |||||| ||||||||||| | ||||||||||||| |||||||   |||||||||||||||||||    
T  28677229 atataagaatacattattgacccttgagattaaaatggacggcttagatttaaagtaccaattaaaacataacatggaccatc 28677311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 12852217 - 12852257
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  12852217 atcttacatatattatgcattatccctaccaactgagttaa 12852257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 24631885 - 24631845
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  24631885 atcttgcatatattatgcattatccttaccaactgagttaa 24631845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 41972749 - 41972785
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||||||||||||||||||    
T  41972749 tgcatatattatgcattatccctaccaactgagttaa 41972785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 2889943 - 2889981
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  2889943 cttgcatatattatgcattgtccctaccaactgagttaa 2889981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 30248102 - 30248060
Alignment:
Q  62 aaatcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||| ||||||||||||||||||||| |||||||||||||    
T  30248102 aaatcttacatatattatgcattatccctgccaactgagttaa 30248060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 47719124 - 47719162
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  47719124 cttgcatatattatgcattatccttaccaactgagttaa 47719162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 12212338 - 12212301
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  12212338 ttgcatatattatgcattatccctaccaaatgagttaa 12212301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 29042583 - 29042543
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  29042583 atcttacatatattatgcattatccctaccaattgagttaa 29042543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 37014192 - 37014235
Alignment:
Q  62 aaatcttgcatatattatgcattatccctaccaactgagttaat 105  Q
    |||||||| ||||||||||||||| || ||||||||||||||||    
T  37014192 aaatcttgtatatattatgcattaaccataccaactgagttaat 37014235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 40618955 - 40618916
Alignment:
Q  65 tcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  40618955 tcttgcatatattatgcattatctttaccaactgagttaa 40618916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 1854313 - 1854275
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  1854313 cttgcatctattatgcattattcctaccaactgagttaa 1854275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 9872122 - 9872156
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||||| |||||||||||    
T  9872122 cttgcatatattatgcattatccttaccaactgag 9872156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 21400040 - 21400074
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  21400040 cttgcatatattatgcattgtccctaccaactgag 21400074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 28039877 - 28039915
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  28039877 cttgcatatattatgcattgtccttaccaactgagttaa 28039915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 29800577 - 29800539
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  29800577 cttgcatattttatgcattatccttaccaactgagttaa 29800539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 30678834 - 30678868
Alignment:
Q  70 catatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||| |||||||||||||||||||    
T  30678834 catatattatgcattgtccctaccaactgagttaa 30678868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 32497498 - 32497536
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  32497498 cttgcatatattatgcattgttcctaccaactgagttaa 32497536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 33153901 - 33153935
Alignment:
Q  70 catatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||| |||||||||||||||||||    
T  33153901 catatattatgcattgtccctaccaactgagttaa 33153935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 41573290 - 41573324
Alignment:
Q  70 catatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||| |||||||||||||||||||    
T  41573290 catatattatgcattgtccctaccaactgagttaa 41573324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 41763172 - 41763206
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||| |||||||||||||||||||||||||    
T  41763172 cttgcatattttatgcattatccctaccaactgag 41763206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 44732680 - 44732642
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  44732680 cttgcatataatatgcaatatccctaccaactgagttaa 44732642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 94
Target Start/End: Original strand, 46579664 - 46579694
Alignment:
Q  64 atcttgcatatattatgcattatccctacca 94  Q
    |||||||||||||||||||||||||||||||    
T  46579664 atcttgcatatattatgcattatccctacca 46579694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 49868055 - 49868017
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  49868055 cttgcatatattatgcattatccatatcaactgagttaa 49868017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 49875616 - 49875654
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  49875616 cttgcatatattatgcattgtccttaccaactgagttaa 49875654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 1408478 - 1408441
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  1408478 ttgcatatattatgcattgtccttaccaactgagttaa 1408441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 3431373 - 3431336
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||| | |||||||||||||||||    
T  3431373 ttgcatatattatgcattcttcctaccaactgagttaa 3431336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 5270758 - 5270795
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  5270758 ttgcatatattatgcattatctctactaactgagttaa 5270795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 18056734 - 18056771
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  18056734 ttgcatatattatgcattgtccttaccaactgagttaa 18056771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 26674443 - 26674406
Alignment:
Q  63 aatcttgcatatattatgcattatccctaccaactgag 100  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  26674443 aatcttgcatattttatgcattatcccaaccaactgag 26674406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 27533287 - 27533254
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactga 99  Q
    ||||||||||||||||||| ||||||||||||||    
T  27533287 cttgcatatattatgcattgtccctaccaactga 27533254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 29936026 - 29935989
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  29936026 ttgcatatattatgcattgtccataccaactgagttaa 29935989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 41974805 - 41974772
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactga 99  Q
    |||||||||||||||||||||||||| |||||||    
T  41974805 cttgcatatattatgcattatccctatcaactga 41974772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 48264488 - 48264525
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagtta 103  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  48264488 cttgcatattttatgcattatccataccaactgagtta 48264525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 10356202 - 10356238
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  10356202 tgcatatattatgcattgtccataccaactgagttaa 10356238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 25365011 - 25365051
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| | | |||||||||||||||    
T  25365011 atcttgcatatattatgcattgttcttaccaactgagttaa 25365051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 26256104 - 26256144
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||| || || ||||||||||||    
T  26256104 atcttgcatatattatgcattacccttatcaactgagttaa 26256144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 26550539 - 26550503
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  26550539 tgcatatagtatgcaatatccctaccaactgagttaa 26550503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 31060222 - 31060262
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||||| ||| ||||||| ||||    
T  31060222 atcttgcatatattatgcattatctctatcaactgaattaa 31060262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 33229701 - 33229737
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||| | |||||||||||||||||    
T  33229701 tgcatatattatgcattgttcctaccaactgagttaa 33229737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 40634246 - 40634210
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  40634246 tgcatataatatgcaatatccctaccaactgagttaa 40634210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 42735926 - 42735890
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  42735926 tgcatatattatgcattttccctaccaaatgagttaa 42735890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 264
Target Start/End: Complemental strand, 28020884 - 28020777
Alignment:
Q  157 gtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataacat 256  Q
    ||||||||||||||||||| ||||||| |||||||||| | ||| |||||||||||||||||||| ||| |||||||| || ||||||||||||| |  |    
T  28020884 gtgagaatgacttctttatctgagaatgtgagaatacaatatcagccctttagattaaaatgaaaagctcagatttaaagttccaaaataaacatcaggt 28020785  T
Q  257 ggaccatc 264  Q
    ||||||||    
T  28020784 ggaccatc 28020777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 28020104 - 28020198
Alignment:
Q  157 gtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacat 251  Q
    ||||||||||| ||||||| ||||||| | |||||||| | ||| |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  28020104 gtgagaatgacatctttatgtgagaatgtaagaatacaatatcagccctttagattaaaatgaaaggcttagatttaaaattccaaaataaacat 28020198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 33045119 - 33045171
Alignment:
Q  182 atatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaa 234  Q
    |||||||||| |||| ||||||||||||||||||||||| |||||||||||||    
T  33045119 atatgagaatccattatcaaccctttagattaaaatgaatggcttagatttaa 33045171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 27152397 - 27152359
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27152397 cttgcatatattatgcattatccctaccaactgagttaa 27152359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 5168596 - 5168634
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  5168596 cttgcatatattatgcattatccctatcaactgagttaa 5168634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 31815904 - 31815942
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  31815904 cttgcatatattatgcattgtccctaccaactgagttaa 31815942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 18324909 - 18324949
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  18324909 atcttgcatatattatgcattgtccttaccaactgagttaa 18324949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 22359051 - 22359011
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  22359051 atcttgcatatattatgcattgtccttaccaactgagttaa 22359011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 31156859 - 31156823
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||| |||||||||||||||||||||||||||||||    
T  31156859 atcttacatatattatgcattatccctaccaactgag 31156823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 45032739 - 45032703
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||| |||||||||||||||    
T  45032739 atcttgcatatattatgcattgtccctaccaactgag 45032703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 104
Target Start/End: Original strand, 32609209 - 32609248
Alignment:
Q  65 tcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  32609209 tcttgcatataatatgcaatatccctaccaactgagttaa 32609248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 104
Target Start/End: Original strand, 39408712 - 39408751
Alignment:
Q  65 tcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  39408712 tcttgcatataatatgcaatatccctaccaactgagttaa 39408751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 2257015 - 2256977
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  2257015 cttgcatatattatgcattgtccataccaactgagttaa 2256977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 3197096 - 3197130
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  3197096 cttgcatatattatgcattgtccctaccaactgag 3197130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 4897587 - 4897549
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  4897587 cttgcatatattatgcattgtccttaccaactgagttaa 4897549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 4944981 - 4944943
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  4944981 cttgcatatattatgcattgtccttaccaactgagttaa 4944943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 7772477 - 7772515
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  7772477 cttgcatatattatgcattatccttaccaattgagttaa 7772515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 20239387 - 20239349
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  20239387 cttgcatatattatgcattatccctatcaattgagttaa 20239349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 20565092 - 20565126
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  20565092 cttgcatatattatgcattgtccctaccaactgag 20565126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 22267557 - 22267519
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  22267557 cttgcatatattatgcattgtccgtaccaactgagttaa 22267519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 24592863 - 24592897
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  24592863 cttgcatatattatgcattgtccctaccaactgag 24592897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 25395459 - 25395497
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  25395459 cttgcatatattatgcattgttcctaccaactgagttaa 25395497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 26133537 - 26133575
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  26133537 cttgcatatattatgcattgtccttaccaactgagttaa 26133575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 27935100 - 27935062
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  27935100 cttgcatatattctgcattgtccctaccaactgagttaa 27935062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Complemental strand, 28644565 - 28644531
Alignment:
Q  70 catatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||| |||||||||||||||||||    
T  28644565 catatattatgcattgtccctaccaactgagttaa 28644531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Complemental strand, 29809366 - 29809332
Alignment:
Q  70 catatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||| |||||||||||||||||||    
T  29809366 catatattatgcattgtccctaccaactgagttaa 29809332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 34977248 - 34977210
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  34977248 cttgcatatattatgcattgtccataccaactgagttaa 34977210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 13922654 - 13922687
Alignment:
Q  71 atatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||| |||||||||||||||||||    
T  13922654 atatattatgcattgtccctaccaactgagttaa 13922687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 15462920 - 15462883
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  15462920 ttgcatatattatgcattgtccataccaactgagttaa 15462883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 18789462 - 18789421
Alignment:
Q  63 aatcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||| |||  ||||||||||||||    
T  18789462 aatcttgcatatattatgcattgtccaaaccaactgagttaa 18789421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 18881176 - 18881229
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaatattatgaggact 117  Q
    ||||||||||| |||||||||||||| |||||||||| |||  ||| |||||||    
T  18881176 atcttgcatattttatgcattatcccaaccaactgagctaaacttacgaggact 18881229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 33041887 - 33041924
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  33041887 ttgcatataatatgcaatatccctaccaactgagttaa 33041924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 961147 - 961111
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagtt 102  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  961147 cttgcatatattatgcattgtccctaccaattgagtt 961111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 10195677 - 10195713
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||||||| || ||||||||    
T  10195677 atcttgcatatattatgcattatccatatcaactgag 10195713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 11560542 - 11560490
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaatattatgaggacta 118  Q
    ||||||||||||||||||| |||||||||| |||| |||  | ||||||||||    
T  11560542 cttgcatatattatgcattgtccctaccaattgagctaagctcatgaggacta 11560490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 24581489 - 24581525
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  24581489 tgcatatattatgcaatatccctgccaactgagttaa 24581525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 28771628 - 28771592
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  28771628 atcttgcatatattatgcattgtccttaccaactgag 28771592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 37352518 - 37352554
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  37352518 tgcatataatatgcaatatccctaccaactgagttaa 37352554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 43146397 - 43146361
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||| |||||||| |||||||||||||||||||||    
T  43146397 tgcataaattatgcaatatccctaccaactgagttaa 43146361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 187 - 264
Target Start/End: Complemental strand, 3658 - 3581
Alignment:
Q  187 agaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataacatggaccatc 264  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  |||||||||    
T  3658 agaatgcattatcaaccctttagatttaaatgaaaggcttagatttaatgtaccaaaataaacattatgtggaccatc 3581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 264
Target Start/End: Complemental strand, 33181170 - 33181063
Alignment:
Q  157 gtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataacat 256  Q
    |||||||||||||  |||||||||||| |||||||| ||| ||| || |||| ||||||||||| |||||||||||| |||||||| | |||||| || |    
T  33181170 gtgagaatgactttcttatttgagaatgtgagaatatattatcagccttttaaattaaaatgaagggcttagatttactgtaccaataaaaacatcacgt 33181071  T
Q  257 ggaccatc 264  Q
    | ||||||    
T  33181070 gcaccatc 33181063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 264
Target Start/End: Original strand, 526795 - 526902
Alignment:
Q  157 gtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataacat 256  Q
    |||||||||||||| |||| ||||||| |||||||||||| | | || || ||||||||||| | | ||||||||||||||||||| | |||||| | ||    
T  526795 gtgagaatgacttccttatatgagaatgtgagaatacattattagccattcagattaaaatggaggacttagatttaatgtaccaataaaaacatcatat 526894  T
Q  257 ggaccatc 264  Q
     |||||||    
T  526895 agaccatc 526902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 13105138 - 13105099
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaat 105  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  13105138 cttgcatatattatgcattgtccctaccaactgagttaat 13105099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 7553723 - 7553685
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  7553723 cttgcatatattatgcattgtccctaccaactgagttaa 7553685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 15079169 - 15079207
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  15079169 cttgcatatattatgcattgtccctaccaactgagttaa 15079207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 37999437 - 37999475
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  37999437 cttgcatatattatgcattatccataccaactgagttaa 37999475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 989595 - 989632
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||| |||||||||||||||||||||||||    
T  989595 ttgcatatattaggcattatccctaccaactgagttaa 989632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 18942960 - 18942928
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgag 100  Q
    |||||||||||||||||||||||||||||||||    
T  18942960 tgcatatattatgcattatccctaccaactgag 18942928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 23816836 - 23816800
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||||||| |||||||||||    
T  23816836 atcttgcatatattatgcattatccttaccaactgag 23816800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 6447233 - 6447195
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  6447233 cttgcatatattatgcattgtccataccaactgagttaa 6447195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 8442504 - 8442542
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  8442504 cttgcatatattatgcattgtccttaccaactgagttaa 8442542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 8984511 - 8984549
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  8984511 cttgcatatattatacattatccataccaactgagttaa 8984549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 11709030 - 11708996
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  11709030 cttgcatatattatgcattgtccctaccaactgag 11708996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 13357458 - 13357496
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  13357458 cttgcatatattatgcattgtccataccaactgagttaa 13357496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 18959193 - 18959155
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  18959193 cttgcatatattatgcattatccctaacaattgagttaa 18959155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 24212169 - 24212211
Alignment:
Q  62 aaatcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||| ||| || ||||||||||||    
T  24212169 aaatcttgcatatattatgcattgtccatagcaactgagttaa 24212211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 26799228 - 26799190
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  26799228 cttgcatattttatgcattgtccctaccaactgagttaa 26799190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 29908055 - 29908021
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  29908055 cttgcatatattatgcattgtccctaccaactgag 29908021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 33451366 - 33451400
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||||| |||||||||||    
T  33451366 cttgcatatattatgcattatccataccaactgag 33451400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 39821928 - 39821894
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  39821928 cttgcatatattatgcattgtccctaccaactgag 39821894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 10601810 - 10601769
Alignment:
Q  63 aatcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||| ||| |||||||||| ||||    
T  10601810 aatcttgcatatattatgcattgtccataccaactgaattaa 10601769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 31512011 - 31511978
Alignment:
Q  70 catatattatgcattatccctaccaactgagtta 103  Q
    ||||||||||||||| ||||||||||||||||||    
T  31512011 catatattatgcattgtccctaccaactgagtta 31511978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 262
Target Start/End: Original strand, 33180913 - 33181017
Alignment:
Q  157 gtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaaaataaacataacat 256  Q
    |||| ||||||||  |||| ||||||| |||||||| ||| ||| |  |||||||||||||||| ||  || ||||||||||||| || |||||| ||||    
T  33180913 gtgataatgactttcttatgtgagaatgtgagaatatattatcagctttttagattaaaatgaagggtctaaatttaatgtaccataa-aaacatcacat 33181011  T
Q  257 ggacca 262  Q
    | ||||    
T  33181012 gtacca 33181017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 34968598 - 34968565
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgag 100  Q
    |||||||||||||||||||||| |||||||||||    
T  34968598 ttgcatatattatgcattatccataccaactgag 34968565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 37938538 - 37938505
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgag 100  Q
    |||||||||||||||||||||| |||||||||||    
T  37938538 ttgcatatattatgcattatccataccaactgag 37938505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 42575980 - 42576017
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  42575980 ttgcatatattatgcattatccataccgactgagttaa 42576017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 7388500 - 7388464
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  7388500 tgcatataatatgcaatatccctaccaactgagttaa 7388464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 8034437 - 8034473
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  8034437 tgcatataatatgcaatatccctaccaactgagttaa 8034473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 10083208 - 10083172
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  10083208 tgcatataatatgcaatatccctaccaactgagttaa 10083172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 13406645 - 13406609
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  13406645 tgcatataatatgcaatatccctaccaactgagttaa 13406609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 15572197 - 15572161
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    |||||||||||||||||  ||||||||||||||||||    
T  15572197 atcttgcatatattatgttttatccctaccaactgag 15572161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 25163221 - 25163189
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||||||| |||||||    
T  25163221 tgcatatattatgcattatccctactaactgag 25163189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 31450982 - 31451018
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  31450982 tgcatataatatgcaatatccctaccaactgagttaa 31451018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 33618017 - 33617981
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  33618017 tgcatataatatgcaatatccctaccaactgagttaa 33617981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 34472342 - 34472306
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  34472342 tgcatataatatgcaatatccctaccaactgagttaa 34472306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 37141401 - 37141353
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaatattatgagg 114  Q
    ||||||||||||||||||| ||| |||||||||| ||||  ||||||||    
T  37141401 cttgcatatattatgcattgtccataccaactgaattaagtttatgagg 37141353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 37717408 - 37717372
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  37717408 tgcatataatatgcaatatccctaccaactgagttaa 37717372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 38344094 - 38344058
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  38344094 tgcatataatatgcaatatccctaccaactgagttaa 38344058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 41458340 - 41458304
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  41458340 tgcatataatatgcaatatccctaccaactgagttaa 41458304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 42933564 - 42933479
Alignment:
Q  157 gtgagaatgacttctttatttgagaatatgagaatacattgtcaaccctttagattaaaatgaaaggcttagatttaatgtaccaa 242  Q
    |||||||||||||  |||| | ||||| |||||||| ||| ||| | ||||||||||||||||| |||||| ||||||||||||||    
T  42933564 gtgagaatgactttattatataagaatgtgagaatatattatcagctctttagattaaaatgaagggcttaaatttaatgtaccaa 42933479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 35126284 - 35126324
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35126284 atcttgcatatattatgcattatccctaccaactgagttaa 35126324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 10922323 - 10922363
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  10922323 atcttgcatatattatgcattgtccctaccaactgagttaa 10922363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 552218 - 552180
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  552218 cttgcatatattatgcaatatccctaccaactgagttaa 552180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 17588408 - 17588368
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  17588408 atcttgcatatattatgcattgtccttaccaactgagttaa 17588368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 51882215 - 51882255
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  51882215 atcttgcatatattatgcattgtccataccaactgagttaa 51882255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 376691 - 376652
Alignment:
Q  65 tcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  376691 tcttgcatatattatgcattatctctaccaaccgagttaa 376652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 16663253 - 16663292
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaat 105  Q
    ||||||||||||||||||||||| ||||||||||| ||||    
T  16663253 cttgcatatattatgcattatccataccaactgagataat 16663292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 99
Target Start/End: Complemental strand, 25016398 - 25016363
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactga 99  Q
    |||||||||||||||||||||||||||| |||||||    
T  25016398 atcttgcatatattatgcattatccctatcaactga 25016363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 2078284 - 2078246
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  2078284 cttgcatatattatgcattgtctctaccaactgagttaa 2078246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 3176990 - 3177028
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  3176990 cttgcatatattatgcattgttcctaccaactgagttaa 3177028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 7464512 - 7464546
Alignment:
Q  70 catatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||| |||||||||||||||||||    
T  7464512 catatattatgcattgtccctaccaactgagttaa 7464546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 7738713 - 7738675
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  7738713 cttgcatattttatgcattgtccctaccaactgagttaa 7738675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 7974529 - 7974563
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||||| |||||||||||    
T  7974529 cttgcatatattatgcattatccataccaactgag 7974563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 12976619 - 12976657
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  12976619 cttgcatatattatgcattgtccctatcaactgagttaa 12976657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 14771375 - 14771337
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  14771375 cttgcatatattatgcattatgcctactaactgagttaa 14771337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 18870742 - 18870776
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  18870742 cttgcatatattatgcattgtccctaccaactgag 18870776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 19468495 - 19468457
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  19468495 cttgcatatattatgcattgtccataccaactgagttaa 19468457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 21914088 - 21914126
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  21914088 cttgcatatattatgcattgtccttaccaactgagttaa 21914126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 22486731 - 22486689
Alignment:
Q  62 aaatcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||| | | |||||||||||||||    
T  22486731 aaatcttgcatatattatgcattgttcttaccaactgagttaa 22486689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 24145442 - 24145404
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  24145442 cttgtatatattatgcattgtccctaccaactgagttaa 24145404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 38130976 - 38131014
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  38130976 cttgcatatattatgcattgtccataccaactgagttaa 38131014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 42401476 - 42401438
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  42401476 cttgcatatactatgcattgtccctaccaactgagttaa 42401438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 45431992 - 45431958
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  45431992 cttgcatatattatgcattgtccctaccaactgag 45431958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 46226094 - 46226132
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  46226094 cttgcatatattatgcattgtccctaccaattgagttaa 46226132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 48315041 - 48315075
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||||| |||||||||||    
T  48315041 cttgcatatattatgcattatccttaccaactgag 48315075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 48511294 - 48511260
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  48511294 cttgcatatattatgcattgtccctaccaactgag 48511260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 52992082 - 52992120
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  52992082 cttgcataaattatgcaatatccctaccaactgagttaa 52992120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 53633638 - 53633672
Alignment:
Q  70 catatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| |||||||||||||||    
T  53633638 catatattatgcattatccttaccaactgagttaa 53633672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 1757687 - 1757724
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||| | |||||||||||||||||    
T  1757687 ttgcatatattatgcattgttcctaccaactgagttaa 1757724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 2662136 - 2662083
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaatattatgaggactat 119  Q
    ||||||||||||||||||| ||  ||||||||||| |||  |||||||||||||    
T  2662136 cttgcatatattatgcattgtctttaccaactgagctaaacttatgaggactat 2662083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 7617705 - 7617738
Alignment:
Q  71 atatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||| |||||||||||||||||||||    
T  7617705 atatattatgcaatatccctaccaactgagttaa 7617738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 19126592 - 19126555
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  19126592 ttgcatatattatgcattatccttactaactgagttaa 19126555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 36431852 - 36431819
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||| ||||||||||||||||||||    
T  36431852 ttgcatatattatacattatccctaccaactgag 36431819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 37921016 - 37921049
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||||||| ||||||||    
T  37921016 ttgcatatattatgcattatccctatcaactgag 37921049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 38094635 - 38094672
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  38094635 ttgcatatattttgcattatccttaccaactgagttaa 38094672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 51469828 - 51469861
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactga 99  Q
    ||||||||||||||||||| ||||||||||||||    
T  51469828 cttgcatatattatgcattgtccctaccaactga 51469861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 759612 - 759644
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactga 99  Q
    |||||||||||||||||| ||||||||||||||    
T  759612 ttgcatatattatgcattgtccctaccaactga 759644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 4200610 - 4200646
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  4200610 tgcatataatatgcaatatccctaccaactgagttaa 4200646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 8113577 - 8113613
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  8113577 atcttgcatatattatgcattgtccttaccaactgag 8113613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 11436549 - 11436513
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  11436549 tgcatataatatgcaatatccctaccaactgagttaa 11436513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 19883133 - 19883093
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||| ||||||||||||| |||||||| ||||||    
T  19883133 atcttgcatattttatgcattatccataccaactaagttaa 19883093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 39216397 - 39216361
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||| || ||||||||||||    
T  39216397 atcttgcatatattatgcattttctctaccaactgag 39216361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 44364066 - 44364030
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  44364066 tgcatataatatgcaatatccctaccaactgagttaa 44364030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 48234472 - 48234508
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  48234472 tgcatatattatgcattgtccccaccaactgagttaa 48234508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 52309135 - 52309171
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  52309135 tgcatatagtatgcaatatccctaccaactgagttaa 52309171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 52974078 - 52974114
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  52974078 tgcatataatatgcaatatccctaccaactgagttaa 52974114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 53432762 - 53432798
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  53432762 tgcatataatatgcaatatccctaccaactgagttaa 53432798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 55066619 - 55066651
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||| |||||||||||    
T  55066619 tgcatatattatgcattatccgtaccaactgag 55066651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 11017220 - 11017186
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    |||||||||||||||||||||||||||||||||||    
T  11017220 cttgcatatattatgcattatccctaccaactgag 11017186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 11720938 - 11720900
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  11720938 cttgcatatattatgcattgtccctaccaactgagttaa 11720900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 20258589 - 20258551
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  20258589 cttgcatatattatgcattatccataccaactgagttaa 20258551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 33654792 - 33654754
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  33654792 cttgcatatattatgcattgtccctaccaactgagttaa 33654754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 2642781 - 2642818
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  2642781 ttgcatatattatgcattatccctaccaactaagttaa 2642818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 31198752 - 31198715
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||| |||||||||||||||    
T  31198752 ttgcatatattatgcattatccttaccaactgagttaa 31198715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 17046380 - 17046340
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  17046380 atcttgcatatattatgcattgtccataccaactgagttaa 17046340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 41417810 - 41417774
Alignment:
Q  63 aatcttgcatatattatgcattatccctaccaactga 99  Q
    ||||||||||||||||| |||||||||||||||||||    
T  41417810 aatcttgcatatattatacattatccctaccaactga 41417774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 103
Target Start/End: Complemental strand, 3389208 - 3389169
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagtta 103  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  3389208 atcttgcatatattatgcattgtccataccaactgagtta 3389169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 100
Target Start/End: Complemental strand, 13044488 - 13044449
Alignment:
Q  61 aaaatcttgcatatattatgcattatccctaccaactgag 100  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  13044488 aaaaccttgcatatattatgcattattcctaccaactgag 13044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 100
Target Start/End: Complemental strand, 13114486 - 13114447
Alignment:
Q  61 aaaatcttgcatatattatgcattatccctaccaactgag 100  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  13114486 aaaaccttgcatatattatgcattattcctaccaactgag 13114447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 40091525 - 40091486
Alignment:
Q  65 tcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  40091525 tcttgcatataatatgcaatatccctaccaactgagttaa 40091486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 3156582 - 3156540
Alignment:
Q  62 aaatcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||    
T  3156582 aaatcttacatattttatgcattatccataccaactgagttaa 3156540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 5107262 - 5107300
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  5107262 cttgcatatattatgcattattcataccaactgagttaa 5107300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 5974242 - 5974280
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  5974242 cttgcatatattatgcattatccctatcgactgagttaa 5974280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 6489051 - 6489017
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  6489051 cttgcatatattatgcattgtccctaccaactgag 6489017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 11647241 - 11647203
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  11647241 cttgcatatattatgcattgtccttaccaactgagttaa 11647203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 15889455 - 15889421
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  15889455 cttgcatatattatgcattgtccctaccaactgag 15889421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 19068456 - 19068490
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||||| |||||||||||    
T  19068456 cttgcatatattatgcattatccataccaactgag 19068490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 20211324 - 20211290
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||| |||||||||||||||||||    
T  20211324 cttgcatatattatgtattatccctaccaactgag 20211290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 20370147 - 20370181
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    |||| ||||||||||||||||||||||||||||||    
T  20370147 cttgtatatattatgcattatccctaccaactgag 20370181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 22498986 - 22498948
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  22498986 cttgcatatattatgcattgtccttaccaactgagttaa 22498948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 31545915 - 31545877
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  31545915 cttgcatatattatgcattatcctaaccaactgagttaa 31545877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 34436895 - 34436861
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  34436895 cttgcatatattatgcattgtccctaccaactgag 34436861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 38495186 - 38495148
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  38495186 cttgcatattttatgcattatccataccaactgagttaa 38495148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 41650956 - 41650994
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  41650956 cttgcatatattatgcattgtccataccaactgagttaa 41650994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 43108613 - 43108575
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  43108613 cttgcatatattatgcattgtccttaccaactgagttaa 43108575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 5485229 - 5485196
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgag 100  Q
    |||||||||||||||||| |||||||||||||||    
T  5485229 ttgcatatattatgcattgtccctaccaactgag 5485196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 6237733 - 6237774
Alignment:
Q  63 aatcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||| ||||| |||||| ||||||    
T  6237733 aatcttgcatatattatgcattgtccctgccaacttagttaa 6237774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 17862022 - 17861989
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgag 100  Q
    |||||||||||||||||| |||||||||||||||    
T  17862022 ttgcatatattatgcattgtccctaccaactgag 17861989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 40056608 - 40056645
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  40056608 ttgcatatattatgcattgtccttaccaactgagttaa 40056645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 546847 - 546811
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  546847 tgcatataatatgcaatatccctaccaactgagttaa 546811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 2363014 - 2362978
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  2363014 tgcatataatatgcaatatccctaccaactgagttaa 2362978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 5900337 - 5900301
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  5900337 tgcatataatatgcaatatccctaccaactgagttaa 5900301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 6414113 - 6414077
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  6414113 tgcatataatatgcaatatccctaccaactgagttaa 6414077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 10241770 - 10241734
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  10241770 tgcatataatatgcaatatccctaccaactgagttaa 10241734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 16094103 - 16094067
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  16094103 atcttacatatattatgcattatccctatcaactgag 16094067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 16752516 - 16752552
Alignment:
Q  63 aatcttgcatatattatgcattatccctaccaactga 99  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  16752516 aatcttgcatatattatgcattgtccttaccaactga 16752552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 19985545 - 19985513
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||| |||||||||||||||||    
T  19985545 tgcatatattatgcaatatccctaccaactgag 19985513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 31877974 - 31877934
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| ||| |||||| ||||||||    
T  31877974 atcttgcatatattatgcattgtccataccaagtgagttaa 31877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 33736039 - 33736075
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  33736039 tgcatataatatgcaatatccctaccaactgagttaa 33736075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 33952799 - 33952831
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgag 100  Q
    |||||||||||| ||||||||||||||||||||    
T  33952799 tgcatatattattcattatccctaccaactgag 33952831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000008; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 2726434 - 2726485
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaatattatgaggact 117  Q
    ||||||||||||||||||| ||| |||||||||||||||  ||| |||||||    
T  2726434 cttgcatatattatgcattgtccataccaactgagttaagtttacgaggact 2726485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 331903 - 331941
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  331903 cttgcatatattatgcattgtctctaccaactgagttaa 331941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 3373394 - 3373436
Alignment:
Q  62 aaatcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||| ||| || ||||||||||||    
T  3373394 aaatcttgcatatattatgcattgtccatatcaactgagttaa 3373436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 9977101 - 9977063
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  9977101 cttgcatatattatgcattatccataccaattgagttaa 9977063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 10780124 - 10780158
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||| |||||||||||||||    
T  10780124 cttgcatatattatgcattgtccctaccaactgag 10780158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 13732859 - 13732821
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  13732859 cttgcatataatatgcaatatccctaccaactgagttaa 13732821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 16403975 - 16404013
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||||||| || |||||||||||||    
T  16403975 cttgcatatattatgcattatctctgccaactgagttaa 16404013  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 100
Target Start/End: Original strand, 30639443 - 30639477
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||| |||||||||||||    
T  30639443 cttgcatatattatgcattattcctaccaactgag 30639477  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 31971573 - 31971535
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  31971573 cttgcatatattatgcattgtccttaccaactgagttaa 31971535  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 4922426 - 4922463
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  4922426 ttgcatatattatacattatccctaccaactaagttaa 4922463  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 8637454 - 8637487
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactga 99  Q
    ||||||||||||||||||| ||||||||||||||    
T  8637454 cttgcatatattatgcattgtccctaccaactga 8637487  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 32524438 - 32524475
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  32524438 ttgcatatattatgcattgtccctaccaattgagttaa 32524475  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 361208 - 361172
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  361208 tgcatataatatgcaatatccctaccaactgagttaa 361172  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 361796 - 361760
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  361796 tgcatatattatgcattgtccataccaactgagttaa 361760  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 8916491 - 8916527
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagtt 102  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  8916491 cttgcatatattatgtattgtccctaccaactgagtt 8916527  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 27094832 - 27094868
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  27094832 tgcatataatatgcaatatccctaccaactgagttaa 27094868  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 28222908 - 28222872
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  28222908 tgcatataatatgcaatatccctaccaactgagttaa 28222872  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 28237277 - 28237313
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  28237277 tgcatataatatgcaatatccctaccaactgagttaa 28237313  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 30938433 - 30938397
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||| | |||||||||||||||||||    
T  30938433 tgcatatattatgcaatgtccctaccaactgagttaa 30938397  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 31802098 - 31802062
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  31802098 tgcatataatatgcaatatccctaccaactgagttaa 31802062  T

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Target: scaffold1160 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 1729 - 1767
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  1729 cttgcatattttatgcattgtccctaccaactgagttaa 1767  T

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Target: scaffold0238 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 25433 - 25395
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  25433 cttgcatatattatgcattgtccttaccaactgagttaa 25395  T

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Target: scaffold0182 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 17788 - 17826
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  17788 cttgcatatattatgcattttccctaccaactaagttaa 17826  T

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Target: scaffold0126 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 34905 - 34943
Alignment:
Q  66 cttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  34905 cttgcatatattatgcattgtccttaccaactgagttaa 34943  T

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Target: scaffold0161 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 26737 - 26704
Alignment:
Q  71 atatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| ||||||||||||    
T  26737 atatattatgcattatccctaacaactgagttaa 26704  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 221031 - 221064
Alignment:
Q  67 ttgcatatattatgcattatccctaccaactgag 100  Q
    |||||||||||||| |||||||||||||||||||    
T  221031 ttgcatatattatgtattatccctaccaactgag 221064  T

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Target: scaffold0690 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 3711 - 3675
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  3711 tgcatataatatgcaatatccctaccaactgagttaa 3675  T

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Target: scaffold0533 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 8866 - 8906
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgagttaa 104  Q
    ||||||||||||||||||||| ||| |||||| ||||||||    
T  8866 atcttgcatatattatgcattgtccttaccaattgagttaa 8906  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 31170 - 31206
Alignment:
Q  64 atcttgcatatattatgcattatccctaccaactgag 100  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  31170 atcttgcatatattatgcattgtccataccaactgag 31206  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 23406 - 23370
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  23406 tgcatataatatgcaatatccctaccaactgagttaa 23370  T

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Target: scaffold0038; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 37439 - 37475
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  37439 tgcatataatatgcaatatccctaccaactgagttaa 37475  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 112153 - 112117
Alignment:
Q  68 tgcatatattatgcattatccctaccaactgagttaa 104  Q
    |||||||| |||||| |||||||||||||||||||||    
T  112153 tgcatataatatgcaatatccctaccaactgagttaa 112117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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