View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2010_high_13 (Length: 302)
Name: NF2010_high_13
Description: NF2010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2010_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 41247568 - 41247850
Alignment:
| Q |
1 |
catgtgaaatttagagacagtgagggttggttggttgttgagggtggtaaatgtgaaaatttatgtatggtaggnnnnnnntggacgtattcgaagaaac |
100 |
Q |
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| T |
41247568 |
catgtgaaatttagagacagtgagggttggttggttgttgagggtggtaaatgtgaaaatttatgtatggtagggaaaaaatggacgtattcgaagaaac |
41247667 |
T |
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| Q |
101 |
ataaatgagaaaaattgaaaaagttgtaaagtgagggtgtatatatgaattttaatgaaacgcacacccatgcagaagaagggtagcaataactcctgca |
200 |
Q |
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| T |
41247668 |
ataaatgagaaaaattgaagaagttgtaaagtgagggtgtatatatgaattttaatgaaacgcacacccatgcagaagaagggtagcaataactcctgca |
41247767 |
T |
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| Q |
201 |
tatttgtgaatgggtggtagcagagtcattctgcaactagtgacccctcaaagaagagagagagtgatcatcgtagacacgga |
283 |
Q |
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| T |
41247768 |
tatttgtgaatgggtggtagcagagtcattctgcaactagtgacccctcaaagaagagagagagtgatcatcgtagacacgga |
41247850 |
T |
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