View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2010_high_14 (Length: 271)
Name: NF2010_high_14
Description: NF2010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2010_high_14 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 18 - 271
Target Start/End: Complemental strand, 34429813 - 34429563
Alignment:
| Q |
18 |
agctgcccctctcgaaaagaatcaaaaccatgaatcaatttcaacaacttcaccaaattctcatcagaagcatcatctcttgctgctaacacagcctcct |
117 |
Q |
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| T |
34429813 |
agctgcccctctcgaaaagaatcaaaaccatgaatcaatttcaacaacttcaccaaattctcatcagaagcatcatctcttgctgctaacacagcctcct |
34429714 |
T |
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| Q |
118 |
ccaacactttgcattcattttcccaaccattcttcttttcctgttgctttgcattctcaacacccataccatcctcctcatcatcatcatcgtcgccttc |
217 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |
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| T |
34429713 |
ccaacacttcgcattcattttcccaaccattcttcttttcctgttgctttgcattctcaacacccataccatccccctcatcatcatcatcgt---cttc |
34429617 |
T |
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| Q |
218 |
tttgtattccgattttatacgtttacttctactacttctaccactattactacc |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34429616 |
tttgtattccgattttatacgtttacttctactacttctaccactattactacc |
34429563 |
T |
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