View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20110_high_2 (Length: 635)

Name: NF20110_high_2
Description: NF20110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20110_high_2
NF20110_high_2
[»] chr4 (33 HSPs)
chr4 (21-622)||(2365472-2366073)
chr4 (238-557)||(55724996-55725315)
chr4 (391-549)||(9777909-9778067)
chr4 (149-487)||(23872677-23873015)
chr4 (414-557)||(8935605-8935748)
chr4 (321-549)||(48805517-48805745)
chr4 (324-487)||(3129365-3129528)
chr4 (151-307)||(19733190-19733347)
chr4 (417-549)||(2072079-2072211)
chr4 (149-292)||(19756063-19756207)
chr4 (149-292)||(19783599-19783743)
chr4 (149-292)||(23641791-23641935)
chr4 (462-513)||(4551330-4551381)
chr4 (169-360)||(29553021-29553213)
chr4 (149-292)||(23647449-23647593)
chr4 (149-292)||(47419600-47419744)
chr4 (149-292)||(55299417-55299561)
chr4 (414-505)||(19115019-19115110)
chr4 (360-510)||(55464285-55464435)
chr4 (393-484)||(42952950-42953041)
chr4 (381-481)||(53810448-53810548)
chr4 (414-557)||(23657828-23657971)
chr4 (446-549)||(29553238-29553341)
chr4 (378-548)||(7099022-7099192)
chr4 (321-487)||(20675623-20675789)
chr4 (414-468)||(26694548-26694602)
chr4 (149-292)||(1827740-1827884)
chr4 (409-557)||(54482620-54482768)
chr4 (438-548)||(9690962-9691072)
chr4 (414-484)||(19648306-19648376)
chr4 (149-361)||(19648422-19648635)
chr4 (438-548)||(54685150-54685260)
chr4 (466-514)||(38445613-38445661)
[»] chr8 (36 HSPs)
chr8 (151-469)||(26774449-26774768)
chr8 (172-518)||(18187716-18188062)
chr8 (324-513)||(8902402-8902591)
chr8 (324-529)||(16048292-16048498)
chr8 (255-513)||(36025096-36025355)
chr8 (226-482)||(23942693-23942950)
chr8 (239-549)||(25193627-25193938)
chr8 (325-557)||(28992606-28992838)
chr8 (149-292)||(7925182-7925326)
chr8 (317-513)||(12341142-12341338)
chr8 (394-522)||(15439683-15439811)
chr8 (394-522)||(15530987-15531115)
chr8 (151-512)||(29721113-29721474)
chr8 (417-557)||(37165590-37165730)
chr8 (380-491)||(20824896-20825007)
chr8 (154-510)||(4987270-4987627)
chr8 (321-491)||(5585286-5585456)
chr8 (149-210)||(16375303-16375364)
chr8 (393-484)||(24794350-24794441)
chr8 (414-557)||(36492912-36493055)
chr8 (159-292)||(9923397-9923531)
chr8 (27-73)||(10442179-10442225)
chr8 (417-507)||(27288657-27288747)
chr8 (409-490)||(17700078-17700159)
chr8 (29-81)||(22570120-22570172)
chr8 (396-484)||(43249252-43249340)
chr8 (426-520)||(4992175-4992269)
chr8 (393-484)||(11393793-11393884)
chr8 (148-286)||(36493183-36493322)
chr8 (486-557)||(42649750-42649821)
chr8 (423-482)||(44082487-44082546)
chr8 (380-466)||(37434391-37434477)
chr8 (149-292)||(8300599-8300743)
chr8 (415-507)||(13878954-13879046)
chr8 (409-493)||(25090982-25091066)
chr8 (149-292)||(41664568-41664712)
[»] chr2 (24 HSPs)
chr2 (151-560)||(20004486-20004883)
chr2 (151-544)||(32191609-32191994)
chr2 (380-482)||(36804725-36804827)
chr2 (149-292)||(13551378-13551522)
chr2 (339-482)||(35488443-35488586)
chr2 (321-484)||(11233863-11234026)
chr2 (324-493)||(12646116-12646285)
chr2 (393-456)||(9409673-9409736)
chr2 (378-482)||(8065691-8065795)
chr2 (321-496)||(13550709-13550884)
chr2 (321-496)||(13551162-13551337)
chr2 (25-81)||(34236530-34236586)
chr2 (414-505)||(28400016-28400107)
chr2 (39-84)||(19251890-19251935)
chr2 (472-557)||(43310790-43310875)
chr2 (393-549)||(9668451-9668607)
chr2 (25-84)||(11460385-11460444)
chr2 (414-505)||(15018260-15018351)
chr2 (433-512)||(28598519-28598598)
chr2 (417-483)||(22724908-22724974)
chr2 (482-560)||(37445621-37445699)
chr2 (472-557)||(26146746-26146831)
chr2 (319-452)||(33583798-33583931)
chr2 (52-84)||(34236428-34236460)
[»] chr3 (40 HSPs)
chr3 (320-557)||(5342584-5342821)
chr3 (151-509)||(40512926-40513285)
chr3 (362-467)||(38774893-38774998)
chr3 (378-482)||(15481188-15481292)
chr3 (378-482)||(24926118-24926222)
chr3 (437-549)||(25024333-25024445)
chr3 (378-482)||(36709516-36709620)
chr3 (151-282)||(5342435-5342565)
chr3 (149-292)||(2365074-2365218)
chr3 (393-557)||(44888435-44888599)
chr3 (414-522)||(53941869-53941977)
chr3 (151-487)||(34829994-34830331)
chr3 (317-543)||(55367155-55367380)
chr3 (409-514)||(9510326-9510431)
chr3 (409-514)||(9518301-9518406)
chr3 (472-557)||(52250648-52250733)
chr3 (414-550)||(6825360-6825496)
chr3 (184-522)||(31675497-31675836)
chr3 (149-292)||(34332015-34332159)
chr3 (321-482)||(21739896-21740057)
chr3 (321-491)||(22734096-22734266)
chr3 (337-557)||(14863854-14864074)
chr3 (378-482)||(42674869-42674973)
chr3 (150-487)||(6175678-6176017)
chr3 (149-292)||(19919429-19919573)
chr3 (29-84)||(1106505-1106560)
chr3 (151-301)||(17270944-17271095)
chr3 (581-616)||(38774266-38774301)
chr3 (414-505)||(45684759-45684850)
chr3 (409-491)||(12341716-12341798)
chr3 (409-507)||(48569500-48569598)
chr3 (151-307)||(962365-962522)
chr3 (432-549)||(35537307-35537424)
chr3 (409-557)||(962624-962772)
chr3 (409-505)||(10868186-10868282)
chr3 (441-513)||(52907708-52907780)
chr3 (472-559)||(48930255-48930342)
chr3 (462-543)||(19875788-19875869)
chr3 (425-522)||(31920828-31920925)
chr3 (441-493)||(18381653-18381705)
[»] chr7 (40 HSPs)
chr7 (317-549)||(20918499-20918730)
chr7 (339-519)||(23811557-23811737)
chr7 (367-549)||(19544821-19545003)
chr7 (432-522)||(23054455-23054545)
chr7 (381-557)||(18671701-18671877)
chr7 (149-510)||(37942054-37942413)
chr7 (437-513)||(4344393-4344469)
chr7 (149-292)||(4937328-4937472)
chr7 (393-557)||(17056060-17056224)
chr7 (438-522)||(20349529-20349613)
chr7 (409-549)||(34104016-34104156)
chr7 (385-547)||(11341337-11341500)
chr7 (393-548)||(13553629-13553784)
chr7 (386-482)||(18768014-18768110)
chr7 (321-510)||(45993153-45993342)
chr7 (393-481)||(5327370-5327458)
chr7 (474-557)||(25018844-25018927)
chr7 (380-482)||(34457590-34457692)
chr7 (378-481)||(36227580-36227683)
chr7 (159-292)||(17721431-17721565)
chr7 (26-84)||(42951391-42951449)
chr7 (414-481)||(41340140-41340207)
chr7 (447-513)||(29916671-29916737)
chr7 (414-492)||(33821025-33821103)
chr7 (425-522)||(39658864-39658962)
chr7 (441-522)||(12308615-12308696)
chr7 (407-492)||(32815774-32815859)
chr7 (456-548)||(6335912-6336004)
chr7 (453-549)||(17504064-17504160)
chr7 (453-549)||(17549054-17549150)
chr7 (149-292)||(29968770-29968914)
chr7 (321-360)||(6335777-6335816)
chr7 (417-543)||(27218591-27218717)
chr7 (240-292)||(2820012-2820065)
chr7 (149-210)||(13440937-13440998)
chr7 (415-484)||(19735122-19735191)
chr7 (27-84)||(23741120-23741177)
chr7 (409-498)||(32482470-32482559)
chr7 (438-522)||(8752886-8752970)
chr7 (477-513)||(22819246-22819282)
[»] chr5 (41 HSPs)
chr5 (323-522)||(26262251-26262450)
chr5 (333-513)||(26262816-26262996)
chr5 (224-513)||(26261593-26261885)
chr5 (377-555)||(380434-380612)
chr5 (323-513)||(35637710-35637899)
chr5 (393-522)||(26263431-26263560)
chr5 (149-557)||(22094449-22094859)
chr5 (149-292)||(30731514-30731658)
chr5 (149-292)||(42514516-42514660)
chr5 (438-549)||(19838156-19838267)
chr5 (409-522)||(23923452-23923564)
chr5 (321-493)||(22437811-22437983)
chr5 (386-468)||(38358087-38358169)
chr5 (408-522)||(476779-476893)
chr5 (438-487)||(31864835-31864884)
chr5 (149-292)||(28534876-28535020)
chr5 (148-286)||(4297508-4297647)
chr5 (412-491)||(8299646-8299725)
chr5 (192-292)||(19838360-19838462)
chr5 (29-84)||(22737019-22737074)
chr5 (409-491)||(10780798-10780880)
chr5 (438-484)||(31864393-31864439)
chr5 (321-487)||(34481549-34481715)
chr5 (432-496)||(588099-588163)
chr5 (153-292)||(23239179-23239319)
chr5 (317-541)||(29572241-29572465)
chr5 (317-541)||(29573618-29573842)
chr5 (317-541)||(29574995-29575219)
chr5 (317-541)||(29576372-29576596)
chr5 (317-541)||(29577749-29577973)
chr5 (317-541)||(29579126-29579350)
chr5 (29-81)||(33870854-33870906)
chr5 (473-557)||(41590627-41590711)
chr5 (412-491)||(25856903-25856982)
chr5 (159-218)||(26262655-26262714)
chr5 (409-460)||(33170286-33170337)
chr5 (194-292)||(35983036-35983135)
chr5 (472-557)||(4297833-4297918)
chr5 (393-482)||(35122151-35122240)
chr5 (409-557)||(42928662-42928810)
chr5 (415-507)||(27796065-27796157)
[»] chr1 (31 HSPs)
chr1 (378-527)||(27393379-27393528)
chr1 (149-487)||(32352512-32352849)
chr1 (394-514)||(20987729-20987849)
chr1 (393-513)||(33142658-33142778)
chr1 (425-557)||(52692002-52692134)
chr1 (149-292)||(5497882-5498026)
chr1 (149-292)||(6051399-6051543)
chr1 (317-557)||(38070363-38070602)
chr1 (322-557)||(25504368-25504603)
chr1 (238-522)||(3544390-3544675)
chr1 (151-509)||(13867042-13867394)
chr1 (407-557)||(21405368-21405518)
chr1 (393-557)||(22191227-22191391)
chr1 (25-84)||(926487-926546)
chr1 (317-509)||(45795854-45796046)
chr1 (149-292)||(48072626-48072770)
chr1 (407-557)||(3074276-3074426)
chr1 (168-465)||(7395939-7396239)
chr1 (438-543)||(28358435-28358540)
chr1 (381-482)||(34853081-34853182)
chr1 (414-522)||(1248052-1248160)
chr1 (327-483)||(20796262-20796418)
chr1 (470-522)||(25252182-25252234)
chr1 (151-549)||(49264167-49264565)
chr1 (447-513)||(19042671-19042737)
chr1 (26-84)||(46526733-46526791)
chr1 (150-264)||(51052706-51052820)
chr1 (214-282)||(5809387-5809456)
chr1 (151-303)||(47622279-47622432)
chr1 (52-84)||(926615-926647)
chr1 (149-292)||(35541830-35541974)
[»] chr6 (35 HSPs)
chr6 (166-522)||(1104164-1104521)
chr6 (317-510)||(15987879-15988072)
chr6 (317-548)||(26514264-26514495)
chr6 (321-557)||(502905-503141)
chr6 (391-557)||(29056050-29056216)
chr6 (149-292)||(26206129-26206273)
chr6 (317-511)||(15511195-15511388)
chr6 (441-522)||(10919957-10920038)
chr6 (393-549)||(13086078-13086234)
chr6 (378-467)||(21549469-21549558)
chr6 (319-557)||(32186214-32186452)
chr6 (425-522)||(25350788-25350885)
chr6 (412-493)||(28575925-28576005)
chr6 (321-510)||(33640495-33640684)
chr6 (25-84)||(16266770-16266829)
chr6 (454-557)||(18588880-18588983)
chr6 (238-522)||(14843426-14843711)
chr6 (325-557)||(11469100-11469331)
chr6 (452-513)||(34180499-34180560)
chr6 (408-511)||(12107091-12107194)
chr6 (412-491)||(17577182-17577261)
chr6 (380-491)||(17605766-17605877)
chr6 (414-557)||(19256171-19256314)
chr6 (380-482)||(23065478-23065580)
chr6 (472-557)||(10362664-10362749)
chr6 (462-543)||(19350489-19350570)
chr6 (453-557)||(7956176-7956279)
chr6 (417-512)||(14551979-14552073)
chr6 (178-280)||(19350752-19350855)
chr6 (321-487)||(15674430-15674596)
chr6 (462-536)||(29976522-29976596)
chr6 (151-307)||(13938499-13938656)
chr6 (414-487)||(23346933-23347006)
chr6 (149-292)||(2554401-2554545)
chr6 (149-292)||(11060062-11060206)
[»] scaffold0026 (1 HSPs)
scaffold0026 (338-560)||(67608-67830)
[»] scaffold0034 (1 HSPs)
scaffold0034 (149-292)||(105043-105187)
[»] scaffold1350 (1 HSPs)
scaffold1350 (149-468)||(164-484)
[»] scaffold0131 (1 HSPs)
scaffold0131 (321-496)||(3929-4104)
[»] scaffold0113 (1 HSPs)
scaffold0113 (432-511)||(36081-36160)
[»] scaffold0002 (2 HSPs)
scaffold0002 (321-496)||(327508-327683)
scaffold0002 (321-496)||(312054-312229)
[»] scaffold0029 (1 HSPs)
scaffold0029 (321-496)||(134227-134402)
[»] scaffold0189 (1 HSPs)
scaffold0189 (447-557)||(6619-6729)
[»] scaffold0043 (1 HSPs)
scaffold0043 (317-522)||(33978-34183)
[»] scaffold0024 (1 HSPs)
scaffold0024 (477-546)||(86730-86799)
[»] scaffold0036 (1 HSPs)
scaffold0036 (393-465)||(3024-3096)


Alignment Details
Target: chr4 (Bit Score: 543; Significance: 0; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 543; E-Value: 0
Query Start/End: Original strand, 21 - 622
Target Start/End: Complemental strand, 2366073 - 2365472
Alignment:
Q  21 cttaggactggtttcttgatcttctactattttgaatggttgattttgaatgagcaaaattgaaggggagacaggtaagctcgtggtttgttttacaatt 120  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2366073 cttaggactggtttcttgatcttctactgtcttgaatggttgattttgaatgagcaaaattgaaggggagacaggtaagctcgtggtttgttttacaatt 2365974  T
Q  121 tggtgcaaattatgtattaatataccaagtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagt 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2365973 tggtgcaaattatgtattaatataccaagtattaaatctagattgtctggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagt 2365874  T
Q  221 ctatcctgacttccttacctgtctatgttctctacttcttcaaactctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnnggga 320  Q
    || || ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||         ||||    
T  2365873 ctgtcttgacttccttacctgtctatgttctctcctttttcaaactctgtcaggtataatctcttctattgagtctcttttaaataatttttttttggga 2365774  T
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2365773 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 2365674  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggag 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2365673 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggag 2365574  T
Q  521 gtcgaaggatgggggtcggagtggttcttcatggtggtggtggcattgaaggaggtgggtggttagagactactcaacatctgtttttgtcttgtctgtg 620  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2365573 gttgaaggatgggggtcggagtggttcttcatggtggtggtggcattgaaggaggtgggtggttagagactactcaacatctgtttttgtcttgtctgtg 2365474  T
Q  621 ct 622  Q
    ||    
T  2365473 ct 2365472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 238 - 557
Target Start/End: Original strand, 55724996 - 55725315
Alignment:
Q  238 cctgtctatgttctctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacata 336  Q
    |||||||||||||| | ||| |||||| ||| ||| |||||||||||||| ||||| ||| | ||||||||         ||| || ||||||||| | |    
T  55724996 cctgtctatgttctttcctttttcaaagctccgtcgggtataatctcttccattgaatctttgttaaataaatttttttgggg-ggtagtgaggaaaaaa 55725094  T
Q  337 ggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattaga 436  Q
    | |||||||||||||||||||||||   | | |||||    | |||| ||||| | ||||| ||||||  | |||||||||||||  ||||||| ||||     
T  55725095 gaaaaatttcttggattggttggaattctttgtgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaactttgctttgttagg 55725194  T
Q  437 aaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggt 536  Q
     |||||||| |||||| ||||||| |||||||  || |||||||||||||||||||| ||| | ||||||| |||||  ||  | | | ||||||||||     
T  55725195 gaaatggtgttggaggttgttagtagatagagatggattatggtatagggtgttggtggctaggtatggtgtggaggatggtggtttggaggatgggggc 55725294  T
Q  537 cggagtggttcttcatggtgg 557  Q
    |||||| ||||||| ||||||    
T  55725295 cggagttgttcttcttggtgg 55725315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 391 - 549
Target Start/End: Complemental strand, 9778067 - 9777909
Alignment:
Q  391 gtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgtt 490  Q
    |||||||||| |||  ||| || |||||||||||| ||  ||||||||||||||| |||||| |  ||||||||| |||  || ||||||||||||||||    
T  9778067 gtttgggggtgaggaggataagggagtttaatatttctcaattagaaaaatggtgttggaggttactagttgataaaggtagtatatggtatagggtgtt 9777968  T
Q  491 ggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttctt 549  Q
    ||| || |||||| |||||||||  ||||||| || || |||||| ||||||| |||||    
T  9777967 ggtagcgcgttatagtgaggaggatgggaggttgacggttgggggccggagtgtttctt 9777909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 149 - 487
Target Start/End: Original strand, 23872677 - 23873015
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||| |||  |||||||| ||||| ||||| |||||||||||||| |||||| | || || ||| || |||| ||  | ||||||||||     
T  23872677 gtattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacctctctgcctgtctatgc 23872776  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttct 347  Q
     || | |||||||||| |||   ||||||||||||| |||||||| ||| | || | |||         ||| |||||||||||  ||||||||||||||    
T  23872777 actttccttcttcaaagctccagcaggtataatctcctctattgattctttgtttattaattttttttgggg-gggagtgaggataataggaaaatttct 23872875  T
Q  348 tggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgat 447  Q
    ||| |  ||||| ||| ||||||||||   |||||| ||||  ||||||||||  || |  |||  ||||||||| | ||||| |||| ||||||||| |    
T  23872876 tggttaagttggcaaactgtttgtttaaaaaaggagtatggcggtttgggggtacggaaattgaaggagtttaatttagctttgttaggaaaatggtgtt 23872975  T
Q  448 ggaggatgttagttgatagaggaggtttatggtatagggt 487  Q
    || ||||||| || |||||||| ||||| |||||| ||||    
T  23872976 ggcggatgttggtagatagaggtggtttgtggtatcgggt 23873015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 414 - 557
Target Start/End: Complemental strand, 8935748 - 8935605
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    |||||||||||||| ||| |||  |||||||| |||||||||||||| ||||| || ||||| |||||||| || || || ||||||||||| |||| |     
T  8935748 gagtttaatattgccttactagggaaatggtgttggaggatgttagtggataggggtggtttttggtatagagttttagtcgctcgttatggcgaggtgt 8935649  T
Q  514 tagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
      ||||||| | |||||||||| |||||| ||||||| ||||||    
T  8935648 gtgggaggttggaggatgggggccggagttgttcttcttggtgg 8935605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 321 - 549
Target Start/End: Complemental strand, 48805745 - 48805517
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    |||||||||||   ||| ||| |||| ||| |||||||||| ||| ||||||||   || ||  ||||| |||||||| | |||  ||||||||||||||    
T  48805745 gggagtgaggatattagaaaagtttcatgggttggttggaataatatttgtttattaaaagattatggaggtttggggctgaggaggatgagagagttta 48805646  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggag 520  Q
    |||||||| ||||||  || | ||| |||||| | |||||||| ||||||||| | |||||||||||||||    ||||||| ||||||| ||  |||||    
T  48805645 atattgctctattaggtaagttgtgttggaggctattagttgaaagaggaggtatgtggtatagggtgttgacaactcgttacggtgaggtggatgggag 48805546  T
Q  521 gtcgaaggatgggggtcggagtggttctt 549  Q
    || | ||  |||| | |||||||||||||    
T  48805545 gttggagattgggtgccggagtggttctt 48805517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 324 - 487
Target Start/End: Original strand, 3129365 - 3129528
Alignment:
Q  324 agtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaata 423  Q
    |||||||| ||||||||||||  |||||| || ||||||| ||||||||     |||||||||||| |||||||||| ||  || ||   ||||||||||    
T  3129365 agtgaggatcataggaaaattagttggataggatggaaaactgtttgttccaaaaaggagcatggaggtttgggggtgagacagctgcaggagtttaata 3129464  T
Q  424 ttgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggt 487  Q
     |||||| ||||  |||||||| ||| ||||||| || |||||||| ||||| |||||||||||    
T  3129465 atgctttgttagggaaatggtgttggcggatgttggtggatagaggtggtttgtggtatagggt 3129528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 19733190 - 19733347
Alignment:
Q  151 attaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttc 250  Q
    |||||| ||||||||||||||| | | ||||| || || |||||||||||||||||| |  | || || ||| |||||||| || | |||||||||| ||    
T  19733190 attaaagctagattgtttggttagcatagtcggttcctttcttttggtggtcgattgatccttctcaaatctgtcctgactgcccttcctgtctatgctc 19733289  T
Q  251 tctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataa 307  Q
    | | ||| |||||| ||| |||||||||||||||||| ||||| ||| | ||||||||    
T  19733290 tttcctttttcaaagctccgtcaggtataatctcttccattgaatctttattaaataa 19733347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 417 - 549
Target Start/End: Complemental strand, 2072211 - 2072079
Alignment:
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtag 516  Q
    |||||||||||||||||||  ||||||||||||  |||||| || |||||||||||  | |||||||||||| |||| ||  | ||||||||||||| |     
T  2072211 tttaatattgctttattaggtaaatggtgatggcagatgttggtggatagaggagggatgtggtatagggtgctggtggcgagatatggtgaggaggcaa 2072112  T
Q  517 ggaggtcgaaggatgggggtcggagtggttctt 549  Q
    ||||||   ||| |||||| ||||||| |||||    
T  2072111 ggaggttagaggttgggggacggagtgtttctt 2072079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 19756207 - 19756063
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||| | ||||| || || ||||| |||||||| ||| || | || |||||  |||||||| |  ||||||||||||     
T  19756207 gtattaaatctagattgtctggttggcaaagtcggttcctttctttcggtggtcgtttgattctactaaagtccgtcctgactgcgctacctgtctatgc 19756108  T
Q  249 tctctacttcttc-aaactctgtcaggtataatctcttctattga 292  Q
     || | ||| ||| ||||||||||||||||||||||||| |||||    
T  19756107 actttcctttttcaaaactctgtcaggtataatctcttccattga 19756063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 19783599 - 19783743
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||| | ||||| || || ||||| |||||||| ||| || | || |||||  |||||||| |  ||||||||||||     
T  19783599 gtattaaatctagattgtctggttggcaaagtcggttcctttctttcggtggtcgtttgattctactaaagtccgtcctgactgcgctacctgtctatgc 19783698  T
Q  249 tctctacttcttc-aaactctgtcaggtataatctcttctattga 292  Q
     || | ||| ||| ||||||||||||||||||||||||| |||||    
T  19783699 actttcctttttcaaaactctgtcaggtataatctcttccattga 19783743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 23641791 - 23641935
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||| | ||||| || || ||||| |||||||| ||| || | || |||||| |||||||| |  ||||||||||||     
T  23641791 gtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactgctctacctgtctatgc 23641890  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | |||||||||| ||| | |||||||||||||||| |||||    
T  23641891 actttccttcttcaaagctccgacaggtataatctcttccattga 23641935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 462 - 513
Target Start/End: Original strand, 4551330 - 4551381
Alignment:
Q  462 gatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  4551330 gatagaggaggtttttggtatagggtgttggttgctcgttatggtgtggagg 4551381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 360
Target Start/End: Original strand, 29553021 - 29553213
Alignment:
Q  169 ggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttctctacttcttcaaa-ctc 267  Q
    |||||||| ||| |||| || |||||||||||||| |||||| | || ||  || || |||||||  | |||||||||| ||| | |||||||||| |||    
T  29553021 ggttggaatagttgtttcctttcttttggtggtcgtttggttcttctcaaagctgtcttgacttctctgcctgtctatgctctttccttcttcaaagctc 29553120  T
Q  268 tgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttcttggattggttgga 360  Q
     |||||||||||||||||| ||||| ||| | || |||||         ||| ||| |||||||||| |||||||| |||||||| |||||||    
T  29553121 cgtcaggtataatctcttccattgaatctttatttaataaatttttttggggtgggggtgaggaacacaggaaaatctcttggataggttgga 29553213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 23647449 - 23647593
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||| | ||||| || || ||||| |||||||  ||| || | || |||||| |||||||| |  ||||||||||||     
T  23647449 gtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcatttgattcttctaaagtctgtcctgactgctctacctgtctatgc 23647548  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | |||||||||| ||| | |||||||||||||||| |||||    
T  23647549 actttccttcttcaaagctccgacaggtataatctcttccattga 23647593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 47419744 - 47419600
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||| | ||||| || || ||||| |||||||| ||| || | || |||||  |||||||| |  | ||||||||||     
T  47419744 gtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtcggtcctgactgctctccctgtctatgc 47419645  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     |||| |||||||||| ||| | |||||||||||||||| |||||    
T  47419644 actctccttcttcaaagctccgacaggtataatctcttccattga 47419600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 55299561 - 55299417
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    ||||||||||||||||||  |||||||| ||||| ||||| |||||||||||||| |||||| | || || ||| || |||| ||  | ||||||||||     
T  55299561 gtattaaatctagattgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacctctctgcctgtctatgc 55299462  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | |||||||||| |||   ||||||||||||| ||||||||    
T  55299461 actttccttcttcaaagctccaacaggtataatctcctctattga 55299417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 505
Target Start/End: Complemental strand, 19115110 - 19115019
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatgg 505  Q
    ||||||||||||||||||||||  |||||||| |||||| ||||||| ||||| || || || |||||||| || || || |||||||||||    
T  19115110 gagtttaatattgctttattagggaaatggtgttggaggttgttagtggataggggtggattttggtatagagttttagtcgctcgttatgg 19115019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 360 - 510
Target Start/End: Original strand, 55464285 - 55464435
Alignment:
Q  360 aaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttag 459  Q
    ||||||||||||||||  ||| ||  |||| |  || |||||||| ||||||| |||||||| | ||  || ||||  |||| ||| |||||| ||||||    
T  55464285 aaaaatgtttgtttaggaaagaagtttggagggatgagggttaggaagatgagggagtttaacactggatttttaggtaaatagtgttggaggttgttag 55464384  T
Q  460 ttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgagg 510  Q
    | |||||||| ||||| |||||||||||  |||||||||| || |||||||    
T  55464385 tagatagaggtggtttgtggtatagggtactggttgctcggtacggtgagg 55464435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 42952950 - 42953041
Alignment:
Q  393 ttgggggttaggtagat-gagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatag 484  Q
    |||||||||||| |||| ||| ||||||||| ||||||| ||||  |||||||| ||||||||||| || ||||||| |||||| ||||||||    
T  42952950 ttgggggttagg-agattgagggagtttaattttgctttgttaggtaaatggtgttggaggatgttggtagatagagtaggtttgtggtatag 42953041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 381 - 481
Target Start/End: Complemental strand, 53810548 - 53810448
Alignment:
Q  381 gagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggt 480  Q
    ||||||||| |||||| ||||||| |  |||  ||||||||||||| |||| ||   |||||||| |||||||||||||| ||||||| |||||| ||||    
T  53810548 gagcatggaggtttggtggttaggaaattgaaggagtttaatattgttttactatgtaaatggtgttggaggatgttagtcgatagagaaggtttgtggt 53810449  T
Q  481 a 481  Q
    |    
T  53810448 a 53810448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 557
Target Start/End: Complemental strand, 23657971 - 23657828
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    |||||||||||||| ||| |||  |||||||| || ||||||||||| ||||| || ||||| |||||||| || || || || |||||| | |||| |     
T  23657971 gagtttaatattgccttactagggaaatggtgttgaaggatgttagtggataggggtggtttttggtatagagttttagtcgcccgttatagcgaggtgt 23657872  T
Q  514 tagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
      ||||||| | |||||||||| || ||| ||||||| ||||||    
T  23657871 gtgggaggttggaggatgggggccgaagttgttcttcttggtgg 23657828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 446 - 549
Target Start/End: Original strand, 29553238 - 29553341
Alignment:
Q  446 atggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggt 545  Q
    ||||||||||||||| |||||||| ||||| |||||||| || || ||  | |||||||||||||     ||||||| | |||||||||| |||||||||    
T  29553238 atggaggatgttagtggatagaggtggtttttggtatagagttttagtcacccgttatggtgaggtttgtgggaggttggaggatgggggccggagtggt 29553337  T
Q  546 tctt 549  Q
    ||||    
T  29553338 tctt 29553341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 548
Target Start/End: Complemental strand, 7099192 - 7099022
Alignment:
Q  378 aaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttat 477  Q
    |||||| ||||| ||||||| |||||| || |||| |||||||||   || || || | ||| | ||| |||||  ||||||||||| |||  ||||| |    
T  7099192 aaggagtatggaggtttgggtgttaggcagttgagggagtttaatgaggcgttgttgggaaagttgtgttggagtttgttagttgatcgagagggtttgt 7099093  T
Q  478 ggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttct 548  Q
    ||||| |||| ||| | ||| | |||||||||||||  | ||||| | |||||||||| ||||||||||||    
T  7099092 ggtatcgggttttgatagctagatatggtgaggaggatgagaggttggaggatgggggccggagtggttct 7099022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 487
Target Start/End: Complemental strand, 20675789 - 20675623
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    |||||||||||  ||||||||||||||||| |  ||||| ||| ||||||||||   || |||  |||  ||||||||||  || |  |||  |||||||    
T  20675789 gggagtgaggataataggaaaatttcttggttatgttggcaaactgtttgtttaaaaaaagagtttggtggtttgggggtgcggaaattgaaggagttta 20675690  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggt 487  Q
    || | ||||| |||| ||||||||| ||| ||||||| || || ||||| ||||| |||||||||||    
T  20675689 atttagctttgttaggaaaatggtgttggcggatgttggtggacagaggtggtttgtggtatagggt 20675623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 468
Target Start/End: Complemental strand, 26694602 - 26694548
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagag 468  Q
    |||||||||||||||||| |||  |||||||| |||||||||||||| |||||||    
T  26694602 gagtttaatattgctttactaggtaaatggtgttggaggatgttagtggatagag 26694548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 1827740 - 1827884
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||| | ||||| || || ||||| ||||| || ||| || | || |||||  |||||||| |  | ||||||||||     
T  1827740 gtattaaatctagattgtctggttggcaaagtcggttcctctctttcggtggccgtttgattcttctaaagtccgtcctgactgctcttcctgtctatgc 1827839  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | ||| |||||| ||| |||||||||||||||||| |||||    
T  1827840 actttcctttttcaaagctccgtcaggtataatctcttccattga 1827884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 557
Target Start/End: Original strand, 54482620 - 54482768
Alignment:
Q  409 tgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtga 508  Q
    |||| |||||||| ||||||||  |||  |||||||| ||| || |||||||||||||||  || ||||||  |||||||||||| ||| | |||||||     
T  54482620 tgagcgagtttaacattgctttgctagggaaatggtgttggcggttgttagttgatagagaggggttatggcgtagggtgttggtggctaggtatggtgt 54482719  T
Q  509 ggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    ||  |  ||  | | | ||||||||||||||||| ||||||| ||||||    
T  54482720 ggcagatggtggtttggaggatgggggtcggagttgttcttcgtggtgg 54482768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 438 - 548
Target Start/End: Complemental strand, 9691072 - 9690962
Alignment:
Q  438 aaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtc 537  Q
    |||||||| |||||| |||| || |||||| | || || |||||||||||| | || ||| | |||||||||||||  ||||||| | ||| |||||| |    
T  9691072 aaatggtgttggaggttgttggtggatagatgtgggttttggtatagggtgctagtagctagatatggtgaggaggctgggaggttggaggttgggggcc 9690973  T
Q  538 ggagtggttct 548  Q
    |||||| ||||    
T  9690972 ggagtgtttct 9690962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 414 - 484
Target Start/End: Complemental strand, 19648376 - 19648306
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatag 484  Q
    ||||||||| |||| ||| |||  |||||||| |||||||||||||| ||||| || ||||| ||||||||    
T  19648376 gagtttaatgttgccttactagggaaatggtgttggaggatgttagtggataggggtggtttttggtatag 19648306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 149 - 361
Target Start/End: Complemental strand, 19648635 - 19648422
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||| ||||||||| |||  |||||||| |||||||| || ||||||| ||| || |||||| | || || ||| |  |||| ||  ||||||||||||     
T  19648635 gtataaaatctagagtgtcaggttggaatagtcgtttcctctcttttgctggccgtttggttcttctcaaatctgtgttgacctctctacctgtctatgc 19648536  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttct 347  Q
    ||| |  ||||||||| ||| |||||||||||| ||| |  |||| ||| | || |||||         ||| ||||||||||| ||||||||||| |||    
T  19648535 tctttctttcttcaaagctccgtcaggtataatttctacccttgaatctttatttaataattttttttggggtgggagtgaggatcataggaaaatgtct 19648436  T
Q  348 tggattggttggaa 361  Q
    ||||| ||||||||    
T  19648435 tggataggttggaa 19648422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 438 - 548
Target Start/End: Complemental strand, 54685260 - 54685150
Alignment:
Q  438 aaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtc 537  Q
    |||||||| |||||  | |||||||||||| |||| |||||||||  ||||||||||||| | ||||||| |   |  ||||||| | |||||||||| |    
T  54685260 aaatggtgttggagattattagttgatagaagagggttatggtatcaggtgttggttgctaggtatggtgtgcgtgatgggaggttggaggatgggggcc 54685161  T
Q  538 ggagtggttct 548  Q
     ||||||||||    
T  54685160 agagtggttct 54685150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 466 - 514
Target Start/End: Complemental strand, 38445661 - 38445613
Alignment:
Q  466 gaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggt 514  Q
    |||||||||| | ||| ||||||||||| | ||||||||||||||||||    
T  38445661 gaggaggtttgttgtacagggtgttggtagttcgttatggtgaggaggt 38445613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 5e-76; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 151 - 469
Target Start/End: Original strand, 26774449 - 26774768
Alignment:
Q  151 attaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttc 250  Q
    |||||||||||||| | ||||||||||||||||||||||||||||| |||||| ||| || || |||||||| |||||||||| |||||| |||||| ||    
T  26774449 attaaatctagattatctggttggaagagtcgttttctgtcttttgttggtcgtttgattctcattaagtctgtcctgacttcgttacctatctatgctc 26774548  T
Q  251 tctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttcttg 349  Q
    ||| |||||||||| ||| |||| ||||||||||||||||||| | ||||||||||||         |||||| ||||||||||||||||||||||| ||    
T  26774549 tctccttcttcaaagctccgtcatgtataatctcttctattgaatatcttttaaataaatttttttggggaggaagtgaggaacataggaaaatttcatg 26774648  T
Q  350 gattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatgg 449  Q
    |||||||||||||||  ||| ||||| |||||||||| || ||||| ||||||   | ||||| |||||||  |||||||| |||| ||||||||| |||    
T  26774649 gattggttggaaaaacatttatttagataaggagcatagatgtttgagggttacacaaatgagggagtttaccattgctttgttagcaaaatggtgttgg 26774748  T
Q  450 aggatgttagttgatagagg 469  Q
    ||||||||||||||||||||    
T  26774749 aggatgttagttgatagagg 26774768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 172 - 518
Target Start/End: Complemental strand, 18188062 - 18187716
Alignment:
Q  172 tggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttctctacttcttcaaa-ctctgt 270  Q
    ||||||||||  ||||| |||||||||||||  ||| | || ||||||| |||||||||||   |  ||||||||| ||| | | |||||||| ||| ||    
T  18188062 tggaagagtcactttctttcttttggtggtcacttgatcattcttaagtttatcctgacttttctgtctgtctatgctctttccatcttcaaagctccgt 18187963  T
Q  271 caggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttg 370  Q
    |||||| ||||||||||||| | | | | || |||||         ||||||| |||||||  |||||||||||||||||||| ||||||||| ||||||    
T  18187962 caggtacaatctcttctattaaatttttattgaataaatttttttggggagggtgtgaggacaataggaaaatttcttggattagttggaaaa-tgtttg 18187864  T
Q  371 tttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagagga 470  Q
    |||||  || |||  |||| | |||||||||||| | | ||| |||||||| | |||||| ||||  |||||||| |||||  ||||||| ||||||||     
T  18187863 tttaggaaaagagtctggagggttgggggttaggcatacgagggagtttaacactgctttgttaggtaaatggtgttggagattgttagtagatagaggt 18187764  T
Q  471 ggtttatggtatagggtgttggttgctcgttatggtgaggaggtaggg 518  Q
    ||||| |||||||||| | |||||| | | ||||||||||||||||||    
T  18187763 ggtttgtggtatagggagctggttgattgatatggtgaggaggtaggg 18187716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 324 - 513
Target Start/End: Complemental strand, 8902591 - 8902402
Alignment:
Q  324 agtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaata 423  Q
    |||| ||| ||||||||||  ||||||||| ||||||| | | ||||| |   ||||||| | ||| ||||||||||||||  ||||||||| ||||||     
T  8902591 agtgcggaccataggaaaacatcttggattagttggaatagtatttgtgtccgtaaggaggaaggaggtttgggggttaggaggatgagagaatttaatc 8902492  T
Q  424 ttgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    | ||| | |||| ||||||||| ||| ||||||||||||||||||  || || |||||||||||||| || |||||||||||||||||||    
T  8902491 tggctctcttaggaaaatggtgttggcggatgttagttgatagagctggcttgtggtatagggtgttagtggctcgttatggtgaggagg 8902402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 324 - 529
Target Start/End: Original strand, 16048292 - 16048498
Alignment:
Q  324 agtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaata 423  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||||||||   |||||| ||||| | ||||||  |||| ||||||| |||||||| |    
T  16048292 agtgaggaacataggaaaacttcttggattgtttggaaaagtgtttgtttacgaaaggagtatggagggttggggactaggcagatgagggagtttaaca 16048391  T
Q  424 ttgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgagga-ggtagggaggt 522  Q
    | ||| | ||||  |||||||| |||||||||||  | |||||||| ||||| || | ||||||| |||| || |||||||| | ||| ||| |||||||    
T  16048392 tggctcttttaggtaaatggtgttggaggatgttgatggatagagggggtttgtgctttagggtggtggtggcccgttatggagtggagggtggggaggt 16048491  T
Q  523 cgaagga 529  Q
     ||||||    
T  16048492 tgaagga 16048498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 255 - 513
Target Start/End: Complemental strand, 36025355 - 36025096
Alignment:
Q  255 cttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttcttggatt 353  Q
    |||||||||| ||| |||||||||||||||||| ||| | ||| |||| |||||         |||||||||||||||  | ||||||||||| |||||     
T  36025355 cttcttcaaagctccgtcaggtataatctcttccattaactctatttttaataaaaaaatttggggagggagtgaggataacaggaaaatttcctggatc 36025256  T
Q  354 ggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggagga 453  Q
    | |||||  | ||||||||||  ||| ||  | ||  | |||||||| ||| || |||| || ||||||||||||||||||| | ||||||| ||| |||    
T  36025255 gcttggagcactgtttgtttacgtaaagaagaggggggattgggggtgaggcagttgagtgaatttaatattgctttattaggataatggtgttggcgga 36025156  T
Q  454 tgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    |||| || ||||||||||| ||||||||||| || ||||| ||  | |||||||||||||    
T  36025155 tgttggtggatagaggagggttatggtatagagttttggtggcgagatatggtgaggagg 36025096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 226 - 482
Target Start/End: Complemental strand, 23942950 - 23942693
Alignment:
Q  226 ctgacttccttacctgtctatgttctctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggaggga 324  Q
    |||||||| || |||||||||| ||| | |||||||||| |||  ||| ||||||||||||| ||||| ||| | || |||||         ||| ||||    
T  23942950 ctgacttctttgcctgtctatgctctttccttcttcaaagctccatcatgtataatctcttccattgaatctttattgaataattttttttggggtggga 23942851  T
Q  325 gtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatat 424  Q
    |||||||   ||| |||||||||||||| |||||||| |   | ||||     |||||||||||| |||||||||| ||| || |||  ||||||||| |    
T  23942850 gtgaggattttagaaaaatttcttggataggttggaataccttgtgttctaaaaaggagcatggaggtttgggggtcaggaagttgaaggagtttaatgt 23942751  T
Q  425 tgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtat 482  Q
    ||||||| |||  |||||||| |||||| ||||||||||||||| ||| || ||||||    
T  23942750 tgctttactaggtaaatggtgttggaggttgttagttgatagagaagggttgtggtat 23942693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 239 - 549
Target Start/End: Complemental strand, 25193938 - 25193627
Alignment:
Q  239 ctgtctatgttctctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacatag 337  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||   ||||| ||| ||||  ||||         |||||||| ||||||  | ||    
T  25193938 ctgtctatgctctttccttcttcaaagctctgtcaggtataatctctatcattgaatctattttttataacaaaatttggggagggaatgaggataacag 25193839  T
Q  338 gaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaa 437  Q
    ||||||||| ||||||  ||||| |   |||||||||   ||||||  |||| | ||||| || ||| || | || || ||||||  ||||||||||| |    
T  25193838 gaaaatttcctggatttcttggagatcagtttgtttacaaaaggagtttggaggattgggtgtgaggcagttaagggaatttaattgtgctttattagga 25193739  T
Q  438 aaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtc 537  Q
    |||||||| ||||||||||| || |||||||  || || |||||| |||||||||| |  || |||||||||||||  ||||||| | |||  ||||| |    
T  25193738 aaatggtgctggaggatgttggtggatagagatgggttctggtatcgggtgttggtggtgcggtatggtgaggaggctgggaggttggaggtagggggcc 25193639  T
Q  538 ggagtggttctt 549  Q
    |||||| |||||    
T  25193638 ggagtgattctt 25193627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 325 - 557
Target Start/End: Original strand, 28992606 - 28992838
Alignment:
Q  325 gtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatat 424  Q
    ||||||| ||||||||||| || ||| ||| |||||| ||| ||||| |   |||||||  | || ||||||||||   |  |||||| |||||||||||    
T  28992606 gtgaggatcataggaaaatctcatgggttgcttggaataatatttgtgtcagtaaggagtctagaggtttgggggtgcagaggatgagggagtttaatat 28992705  T
Q  425 tgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcg 524  Q
    ||   | ||||| |||||||| |||||| |  |||| |||| |    |||| ||||||||||||||||| |||||||||||||||||||  | ||||| |    
T  28992706 tgacctgttagagaaatggtgttggaggttactagtcgataaaaacagtttgtggtatagggtgttggtagctcgttatggtgaggaggatgagaggttg 28992805  T
Q  525 aaggatgggggtcggagtggttcttcatggtgg 557  Q
    |||| |||||| | ||||| |||||| ||||||    
T  28992806 aaggttgggggccagagtgtttcttcgtggtgg 28992838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 7925326 - 7925182
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| |||||||   ||||| || || ||||| |||||||| ||| || | || |||||| |||||||| |  ||||||||||||     
T  7925326 gtattaaatctagattgtctggttggncaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactgctctacctgtctatgc 7925227  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | |||||||||| ||| | |||||||||||||||| |||||    
T  7925226 actttccttcttcaaagctccgacaggtataatctcttccattga 7925182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 317 - 513
Target Start/End: Complemental strand, 12341338 - 12341142
Alignment:
Q  317 gggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagag 416  Q
    |||||||||||||||  | ||||||||||| ||||||| |||||     || ||||||   |||||| ||||  |||||||||| ||  || |||  ||     
T  12341338 gggagggagtgaggataacaggaaaatttcctggattgcttggagttcggtatgtttacgaaaggagaatgggggtttgggggtgagacagttgaaggaa 12341239  T
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    |||||||| ||||| |||| ||| ||||| |||||||||||||| ||||||||||| || |||| ||||||  |||| ||  | |||||||||||||    
T  12341238 tttaatatggctttgttaggaaagtggtgttggaggatgttagtggatagaggagggttgtggtttagggtactggtggcgaggtatggtgaggagg 12341142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 394 - 522
Target Start/End: Complemental strand, 15439811 - 15439683
Alignment:
Q  394 tgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggt 493  Q
    ||||||||||| || |||| |||||||||| ||| ||| |||  |||||||| |||  |||||| ||  ||||||  ||||||||||||||||||||||     
T  15439811 tgggggttaggcagttgagggagtttaatagtgccttactaggtaaatggtgttggcagatgttggtgaatagagatggtttatggtatagggtgttggg 15439712  T
Q  494 tgctcgttatggtgaggaggtagggaggt 522  Q
     || |  ||||||||||||| ||||||||    
T  15439711 ggcgcagtatggtgaggaggcagggaggt 15439683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 394 - 522
Target Start/End: Complemental strand, 15531115 - 15530987
Alignment:
Q  394 tgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggt 493  Q
    ||||||||||| || |||| |||||||||| ||| ||| |||  |||||||| |||  |||||| ||  ||||||  ||||||||||||||||||||||     
T  15531115 tgggggttaggcagttgagggagtttaatagtgccttactaggtaaatggtgttggcagatgttggtgaatagagatggtttatggtatagggtgttggg 15531016  T
Q  494 tgctcgttatggtgaggaggtagggaggt 522  Q
     || |  ||||||||||||| ||||||||    
T  15531015 ggcgcagtatggtgaggaggcagggaggt 15530987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 151 - 512
Target Start/End: Original strand, 29721113 - 29721474
Alignment:
Q  151 attaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttc 250  Q
    ||||||||||||||||| || ||| |||||||||| || || || || || |||||| || | || |||||| ||||| | || || |||||||||| ||    
T  29721113 attaaatctagattgttagggtggcagagtcgtttcctctcattcgggggccgattgattttgctcaagtctgtcctgtcctctttgcctgtctatgctc 29721212  T
Q  251 tctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctct-tttaaataannnnnnnnngggagggagtgaggaacataggaaaatttctt 348  Q
    | | ||| |||||| ||| |||||||||||||||||| ||||| ||| | |||||||           |||||||||||||||  | ||||||||||| |    
T  29721213 tttcctttttcaaagctccgtcaggtataatctcttccattgaatctatgtttaaat-tgtttttttggggagggagtgaggataacaggaaaatttcct 29721311  T
Q  349 ggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatg 448  Q
    |||| | ||||||  || ||||||    ||||||| ||||  | ||||| || ||| |  |||  ||||||||| |||| || ||||  |||||||| ||    
T  29721312 ggatcgcttggaattatatttgttctcgtaaggagtatgg-gggttgggtgtgaggaaattgaaggagtttaatcttgcgttgttaggcaaatggtgttg 29721410  T
Q  449 gaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggag 512  Q
    ||||||||||||||||  ||| || || ||||||||||| ||||| ||  | ||||||||||||    
T  29721411 gaggatgttagttgatcaaggtgggttgtggtatagggttttggtggcgagatatggtgaggag 29721474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 417 - 557
Target Start/End: Original strand, 37165590 - 37165730
Alignment:
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtag 516  Q
    |||||||||||| |||||| ||| || || |||||||||||||| ||||||||||| || |||||||||||  |||| ||  | ||||| |||||||  |    
T  37165590 tttaatattgctctattaggaaagtgatgttggaggatgttagtggatagaggaggcttgtggtatagggtactggtggcgagatatggcgaggaggatg 37165689  T
Q  517 ggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    || ||| | ||| |||||| ||||||| |||| | ||||||    
T  37165690 ggcggttggaggttgggggccggagtgtttctacttggtgg 37165730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 491
Target Start/End: Complemental strand, 20825007 - 20824896
Alignment:
Q  380 ggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatgg 479  Q
    |||| ||||| | ||||| ||||||  | ||||||||||||| |||||||| || |  |||||||| |||||| ||||||||||||| |||||||| |||    
T  20825007 ggagtatggagggttgggtgttaggaggttgagagagtttaacattgctttgttggggaaatggtgttggaggctgttagttgataggggaggtttgtgg 20824908  T
Q  480 tatagggtgttg 491  Q
      ||||||||||    
T  20824907 agtagggtgttg 20824896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 510
Target Start/End: Original strand, 4987270 - 4987627
Alignment:
Q  154 aaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttctct 253  Q
    ||||||||| |||  |||||||| |||||||| || ||||||||||| || |||||| | || || ||| |  |||| ||  |||||||||||| ||| |    
T  4987270 aaatctagactgtcaggttggaatagtcgtttcctttcttttggtggccgtttggttcttctcaaatctgtgttgacctctctacctgtctatgctcttt 4987369  T
Q  254 acttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttcttggat 352  Q
      ||||||||| ||| |||||||||||| ||| |  |||| ||| | || |||||         ||| || |||||||| ||||||||||| ||||||||    
T  4987370 ctttcttcaaagctccgtcaggtataatttctacccttgaatctttatttaataattttttttggggtggtagtgaggatcataggaaaatgtcttggat 4987469  T
Q  353 tggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggagg 452  Q
     ||||||||   ||||||| |    ||||||  |||| | || ||||||||  || |||  ||||||||| |||| ||| |||  |||||||| ||||||    
T  4987470 aggttggaactctgtttgtctccagaaggagtttggagggttaggggttagacagttgaaggagtttaatgttgccttactagggaaatggtgttggagg 4987569  T
Q  453 atgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgagg 510  Q
    |||||||| ||| | || ||||| |||||||| || || || || |||||||| ||||    
T  4987570 atgttagtggatgggggtggtttttggtatagagttttagtcgcccgttatggcgagg 4987627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 321 - 491
Target Start/End: Complemental strand, 5585456 - 5585286
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    ||||||||||| ||||||||||| |||||| |  ||||||| | |||||||||   ||||||| ||||| | |||| ||| ||| || | || || ||||    
T  5585456 gggagtgaggatcataggaaaatatcttggttacgttggaatattgtttgtttgcgtaaggagtatggaggattggaggtgaggaagttaagggaattta 5585357  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttg 491  Q
    ||||||||||| |||  |||||||| |||  | ||||||| ||||||||  || | | |||||||||||||    
T  5585356 atattgctttactaggtaaatggtgttggtagttgttagtcgatagaggtagtctgttgtatagggtgttg 5585286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 16375303 - 16375364
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggtt 210  Q
    |||||||||||||| |||| |||||||| ||||| ||||| |||||||||||||| ||||||    
T  16375303 gtattaaatctagactgttaggttggaatagtcggtttctctcttttggtggtcgcttggtt 16375364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 484
Target Start/End: Complemental strand, 24794441 - 24794350
Alignment:
Q  393 ttgggggttaggtagat-gagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatag 484  Q
    |||||||||||| |||| ||| ||||||||| ||||||| ||||  |||||||| ||||||||||| || ||||||| |||||| ||||||||    
T  24794441 ttgggggttagg-agattgagggagtttaattttgctttgttaggtaaatggtgttggaggatgttggtagatagagtaggtttgtggtatag 24794350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 557
Target Start/End: Complemental strand, 36493055 - 36492912
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    ||||||||| |||| |||||||  |||||||| ||| |  |||| ||||| ||  |  |||||||||||||||||||||| ||  | |||||||||||||    
T  36493055 gagtttaatgttgcgttattaggcaaatggtgttggcgtttgttggttgagaggagtagtttatggtatagggtgttggtggcgaggtatggtgaggagg 36492956  T
Q  514 tagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
      ||||||| |  || |||||| ||||| |||||||| ||||||    
T  36492955 atgggaggttggcggttgggggccggagaggttcttcttggtgg 36492912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 292
Target Start/End: Complemental strand, 9923531 - 9923397
Alignment:
Q  159 tagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttctctacttc 258  Q
    |||||||| ||||||| | ||||| || || |||||||||||||| |||||| | ||||||||  || ||||| |  |||||||||||   || | |||     
T  9923531 tagattgtctggttggcaaagtcgattcctttcttttggtggtcgtttggttcttcttaagtccgtcttgactgctctacctgtctatacactttccttt 9923432  T
Q  259 ttcaaa-ctctgtcaggtataatctcttctattga 292  Q
    |||||| ||| |||||||||||||||||| |||||    
T  9923431 ttcaaagctccgtcaggtataatctcttccattga 9923397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 10442179 - 10442225
Alignment:
Q  27 actggtttcttgatcttctactattttgaatggttgattttgaatga 73  Q
    |||||||||||||||||||||  | ||||||||||||||||||||||    
T  10442179 actggtttcttgatcttctaccgtcttgaatggttgattttgaatga 10442225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 507
Target Start/End: Complemental strand, 27288747 - 27288657
Alignment:
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtg 507  Q
    ||||||||  ||||||||| ||||||||| |||||||| || ||  | | | |||||||||||||||||||||||| | | ||||||||||    
T  27288747 tttaatatatctttattaggaaaatggtgttggaggatattggtgaacatatgaggtttatggtatagggtgttggctacccgttatggtg 27288657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 409 - 490
Target Start/End: Complemental strand, 17700159 - 17700078
Alignment:
Q  409 tgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgtt 490  Q
    ||||||||||||| |||||||| || |  |||||||| ||| || ||||||||||||| |||||||| |||  |||||||||    
T  17700159 tgagagagtttaacattgctttgttggggaaatggtgttggcggctgttagttgataggggaggtttgtggagtagggtgtt 17700078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 22570120 - 22570172
Alignment:
Q  29 tggtttcttgatcttctactattttgaatggttgattttgaatgagcaaaatt 81  Q
    |||||||||||||||||||| | | |||| ||||||||||||||| |||||||    
T  22570120 tggtttcttgatcttctactgtctcgaatagttgattttgaatgatcaaaatt 22570172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 484
Target Start/End: Original strand, 43249252 - 43249340
Alignment:
Q  396 ggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatag 484  Q
    |||||||||  | |||||||||||||| ||||||| ||||  |||||||| |||||||| || || ||||||| ||| || ||||||||    
T  43249252 ggggttaggaggttgagagagtttaattttgctttgttaggtaaatggtgttggaggatattggtagatagagtagggttgtggtatag 43249340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 520
Target Start/End: Original strand, 4992175 - 4992269
Alignment:
Q  426 gctttattagaaaaatggtgatggaggatgttagttgataga-ggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggag 520  Q
    ||||| |||||||||||||| |||||| |  || | || ||| |||||||| ||||||||||| ||||||||| | ||||||||||| ||||||||    
T  4992175 gctttgttagaaaaatggtgttggaggttactaatggagagaaggaggttt-tggtatagggtcttggttgctaggtatggtgaggaagtagggag 4992269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 11393793 - 11393884
Alignment:
Q  393 ttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatag 484  Q
    |||||||||||||   |||| ||||||||| |||| || ||||  |||||||| |||||| |||| || ||||||| |||||| ||||||||    
T  11393793 ttgggggttaggtgattgagggagtttaattttgcattgttaggtaaatggtgttggaggttgttggtcgatagagtaggtttgtggtatag 11393884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 286
Target Start/End: Complemental strand, 36493322 - 36493183
Alignment:
Q  148 agtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatg 247  Q
    ||||||||||| ||||||| |||||  || ||||| ||| | || |||||||| || || ||| |||| |||||| || |||| ||  ||||||||||||    
T  36493322 agtattaaatcgagattgtctggtttcaatagtcggtttttatcgtttggtggccggttagttctcctaaagtctgtcttgacctctctacctgtctatg 36493223  T
Q  248 ttctctacttcttcaa-actctgtcaggtataatctcttc 286  Q
     ||| | |||||||||  ||| |||||||||||| |||||    
T  36493222 ctctttccttcttcaaggctccgtcaggtataatttcttc 36493183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 557
Target Start/End: Complemental strand, 42649821 - 42649750
Alignment:
Q  486 gtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    |||||||| ||| | |||||||||||||  ||||||| ||| |||||||| |||||||||||| | ||||||    
T  42649821 gtgttggtggctagatatggtgaggaggacgggaggttgaaagatgggggccggagtggttctacgtggtgg 42649750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 482
Target Start/End: Original strand, 44082487 - 44082546
Alignment:
Q  423 attgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtat 482  Q
    ||||||||| |||  |||||||| |||||||||||||||||||||| ||| || ||||||    
T  44082487 attgctttactaggtaaatggtgttggaggatgttagttgatagagaagggttgtggtat 44082546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 380 - 466
Target Start/End: Original strand, 37434391 - 37434477
Alignment:
Q  380 ggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatag 466  Q
    |||| ||||| | ||||| ||||||  | ||||||||||||| |||||||| || | ||||||||| ||| || |||||||||||||    
T  37434391 ggagtatggagggttgggtgttaggaggttgagagagtttaacattgctttgttgggaaaatggtgttggcggctgttagttgatag 37434477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 8300743 - 8300599
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||  ||||||| | ||||| ||||| || || ||||| || ||| || | || |||||  |||||||| |  ||||||||||||     
T  8300743 gtattaaatctagattggctggttggcaaagtcggtttctttccttcggtggccgtttgattcttctaaagtccgtcctgactgctctacctgtctatgc 8300644  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | ||| |||||| ||| | |||||||||||||||| |||||    
T  8300643 actttcctttttcaaagctccggcaggtataatctcttccattga 8300599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 507
Target Start/End: Original strand, 13878954 - 13879046
Alignment:
Q  415 agtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtg 507  Q
    ||||||| ||||||||  |||  |||||||| ||| || |||||||||||||||  || ||||||  |||||||||||| ||| | |||||||    
T  13878954 agtttaacattgctttgctagggaaatggtgttggcggttgttagttgatagagaggggttatggcgtagggtgttggtggctaggtatggtg 13879046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 409 - 493
Target Start/End: Complemental strand, 25091066 - 25090982
Alignment:
Q  409 tgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggt 493  Q
    ||||||||||||| |||||||| ||||  |||||||| | | || |||||||||||||||  || || |||  ||||||||||||    
T  25091066 tgagagagtttaacattgctttgttagggaaatggtgttagcggttgttagttgatagagaggggttgtggcgtagggtgttggt 25090982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 41664568 - 41664712
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||| | ||||| || || ||||| |||||||| ||| || | || |||||  |||||||| |   ||||||||| |     
T  41664568 gtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctccacctgtctacgc 41664667  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | ||| |||||| ||| |||||||||||||| ||| |||||    
T  41664668 actttcctttttcaaagctccgtcaggtataatctattccattga 41664712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 3e-62; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 151 - 560
Target Start/End: Complemental strand, 20004883 - 20004486
Alignment:
Q  151 attaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttc 250  Q
    |||||||||||||||| ||||||||||| ||  ||| |||||||||||||||| ||| || ||||||||  | |||||||||| ||||||||||||  ||    
T  20004883 attaaatctagattgtctggttggaagattcactttttgtcttttggtggtcgtttgattttccttaagattgtcctgacttcgttacctgtctatactc 20004784  T
Q  251 tctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttcttg 349  Q
    ||| |||||||||| |||| |||||||||||              ||||| |||||||          ||||||||| |||||||||      ||| | |    
T  20004783 tctccttcttcaaagctctatcaggtataat--------------ctcttctaaataatttttttgaaggagggagtcaggaacataaatttttttttcg 20004698  T
Q  350 gattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatgg 449  Q
    ||||| |||||||||||||||||||| |||||| |||||| |||||||||||||| ||||||| |||||||| | |||||| |||||||||||||| |||    
T  20004697 gattgtttggaaaaatgtttgtttagataaggatcatggaggtttgggggttaggaagatgagggagtttaacactgctttgttagaaaaatggtgttgg 20004598  T
Q  450 aggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggat-gggggtcggagtggttct 548  Q
    ||||||||||||||||| |||| ||| ||||||||||| ||||| ||| |||| |||||||| |||||||||| | ||||| |||||| ||||| |||||    
T  20004597 aggatgttagttgataggggagatttgtggtatagggtattggtggctggttacggtgaggatgtagggaggttggaggatggggggttggagttgttct 20004498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 151 - 544
Target Start/End: Complemental strand, 32191994 - 32191609
Alignment:
Q  151 attaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttc 250  Q
    |||||||||||||||| ||||||||||||| | ||||| |||||||||||| | ||| || ||||||| | | |  ||||||| ||||||| | ||| ||    
T  32191994 attaaatctagattgtctggttggaagagttgctttctttcttttggtggttgtttgattctccttaaatttgtattgacttcgttacctggccatgctc 32191895  T
Q  251 tctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttcttg 349  Q
    |||  ||||||||| |||  |||||||||| ||||||| |||| ||||||||||||||           |||||||||||||||||| ||||||||| ||    
T  32191894 tctctttcttcaaagctccttcaggtataacctcttctgttgaatctcttttaaataattttttttgaagagggagtgaggaacatatgaaaatttcatg 32191795  T
Q  350 gattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatgg 449  Q
     |||||||||||| |||||||||||| ||||||| ||||| ||||| |||||||  | ||||| |||||||| |         ||| ||||||||| ||     
T  32191794 aattggttggaaacatgtttgtttagataaggagtatggaggtttgagggttagacaaatgagggagtttaaca---------taggaaaatggtgctga 32191704  T
Q  450 aggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtgg 544  Q
    ||||||||| |||||||||||| |||  | |||||| | ||| | ||| |||||||||| ||||||||||||| | |||||||||| ||||||||    
T  32191703 aggatgttaattgatagaggagatttgcgatataggatattgatggcttgttatggtgatgaggtagggaggttggaggatgggggccggagtgg 32191609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 380 - 482
Target Start/End: Complemental strand, 36804827 - 36804725
Alignment:
Q  380 ggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatgg 479  Q
    |||||||||| | |||||||||||| || ||| ||||||||||||||||||| ||| ||||||||| |||||||||||||| || |||| |||||| |||    
T  36804827 ggagcatggatggttgggggttaggaagttgaaagagtttaatattgctttactaggaaaatggtgttggaggatgttagtagagagagaaggtttgtgg 36804728  T
Q  480 tat 482  Q
    |||    
T  36804727 tat 36804725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 13551522 - 13551378
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||| |||  |||||||| ||||| ||||| |||||||||||||| |||||| | || || ||| ||||||| || || ||||||||||     
T  13551522 gtattaaatctagactgtcaggttggaatagtcggtttctatcttttggtggtcgcttggttcttctcaaatctgtcctgacctctttgcctgtctatgc 13551423  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | |||||||||| |||  |||||||||||||| ||||||||    
T  13551422 actttccttcttcaaagctccatcaggtataatctcctctattga 13551378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 339 - 482
Target Start/End: Complemental strand, 35488586 - 35488443
Alignment:
Q  339 aaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaa 438  Q
    |||||||||||||| |||||||| | ||| ||||     | |||||||||| |||||||||||||| || |||  ||||||||| |||||||| |||  |    
T  35488586 aaaatttcttggataggttggaatactgtgtgttctaaaatggagcatggaggtttgggggttaggaagttgaaggagtttaatgttgctttactaggta 35488487  T
Q  439 aatggtgatggaggatgttagttgatagaggaggtttatggtat 482  Q
    ||||||| |||||| ||||||||||||||| ||| || ||||||    
T  35488486 aatggtgttggaggttgttagttgatagagaagggttgtggtat 35488443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 321 - 484
Target Start/End: Original strand, 11233863 - 11234026
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    ||||||||||| | | |||||||| ||||||| |||||||| | | | ||||   | ||||||  |||| | |||||||||||| || |||| |||||||    
T  11233863 gggagtgaggaccgtcggaaaattacttggataggttggaatactttgtgttcttcaaaggagtctggagggttgggggttaggaagttgagggagttta 11233962  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatag 484  Q
    || ||||||| ||||  |||||||| |||| |||||| || ||||||| |||||| ||||||||    
T  11233963 attttgctttgttaggtaaatggtgttggacgatgttggtagatagagtaggtttgtggtatag 11234026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 324 - 493
Target Start/End: Complemental strand, 12646285 - 12646116
Alignment:
Q  324 agtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaata 423  Q
    ||||||||| | || |||||||||||||||||||||||   | | |||||    | |||| ||||| | ||||| ||||||  | |||||||||||||      
T  12646285 agtgaggaaaaaagaaaaatttcttggattggttggaattctttgtgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaact 12646186  T
Q  424 ttgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggt 493  Q
    ||| ||| |||| ||||||||| |||||| ||||||| |||||||  || || |||||||||||||||||    
T  12646185 ttgttttgttaggaaaatggtgttggaggttgttagtagatagagatggattgtggtatagggtgttggt 12646116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 9409736 - 9409673
Alignment:
Q  393 ttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgt 456  Q
    |||||||||||| |||| ||||||||||| ||||||||||||||||| ||||| |||| |||||    
T  9409736 ttgggggttaggaagataagagagtttaacattgctttattagaaaagtggtgttggaagatgt 9409673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 8065691 - 8065795
Alignment:
Q  378 aaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttat 477  Q
    |||||||||||| |||||||||| ||| || |||   |||||||| |||||||| |||  ||||| || |||||| ||||||||||||||| ||| || |    
T  8065691 aaggagcatggaggtttgggggtcaggaagttgaagaagtttaatgttgctttactaggtaaatgatgttggaggttgttagttgatagagaagggttgt 8065790  T
Q  478 ggtat 482  Q
    |||||    
T  8065791 ggtat 8065795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 321 - 496
Target Start/End: Complemental strand, 13550884 - 13550709
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagat-gagagagttt 419  Q
    |||||||||||  |||||||||| |||||| |  ||||| ||| ||||||||||   ||||||  |||  |||||||||| ||| |||| ||  ||||||    
T  13550884 gggagtgaggataataggaaaatatcttggttaagttggcaaactgtttgtttaaaaaaggagtgtggcggtttgggggtgagg-agattgaaggagttt 13550786  T
Q  420 aatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgc 496  Q
    ||||| || || ||||  |||||||| |||||| |||| ||||||||||| | ||| ||||||||||| || |||||    
T  13550785 aatatagcattgttagggaaatggtgttggaggttgttggttgatagaggtgatttgtggtatagggttttagttgc 13550709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 321 - 496
Target Start/End: Complemental strand, 13551337 - 13551162
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagat-gagagagttt 419  Q
    |||||||||||  |||||||||| |||||| |  ||||| ||| ||||||||||   ||||||  |||  |||||||||| ||| |||| ||  ||||||    
T  13551337 gggagtgaggataataggaaaatatcttggttaagttggcaaactgtttgtttaaaaaaggagtgtggcggtttgggggtgagg-agattgaaggagttt 13551239  T
Q  420 aatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgc 496  Q
    ||||| || || ||||  |||||||| |||||| |||| ||||||||||| | ||| ||||||||||| || |||||    
T  13551238 aatatagcattgttagggaaatggtgttggaggttgttggttgatagaggtgatttgtggtatagggttttagttgc 13551162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 34236530 - 34236586
Alignment:
Q  25 ggactggtttcttgatcttctactattttgaatggttgattttgaatgagcaaaatt 81  Q
    |||||||||||||||||||||| | | |||||||||| ||||||||||| |||||||    
T  34236530 ggactggtttcttgatcttctaatgtcttgaatggttaattttgaatgatcaaaatt 34236586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 505
Target Start/End: Original strand, 28400016 - 28400107
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatgg 505  Q
    |||||||||||||||||| |||  |||||||| |||||||||||||| ||||||| |||  | ||||||  ||| || || |||||||||||    
T  28400016 gagtttaatattgctttactaggtaaatggtgttggaggatgttagtcgatagagaagggatgtggtatcaggttttagtcgctcgttatgg 28400107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 19251935 - 19251890
Alignment:
Q  39 atcttctactattttgaatggttgattttgaatgagcaaaattgaa 84  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||    
T  19251935 atcttctactgttttgaatggttgattttgaatgatcgaaattgaa 19251890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 43310875 - 43310790
Alignment:
Q  472 gtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    |||| ||||||||||||||||| ||  | ||||| |||||||  ||||||| | ||| |||||| |||||||||||||| ||||||    
T  43310875 gtttgtggtatagggtgttggtggcgagatatggcgaggaggatgggaggttggaggttgggggccggagtggttcttcttggtgg 43310790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 549
Target Start/End: Original strand, 9668451 - 9668607
Alignment:
Q  393 ttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttgg 492  Q
    ||||||||||||  | |||| ||||||||  ||||||| ||||  |||| ||| ||||||||||| || ||||||| ||| || |||||||| ||  | |    
T  9668451 ttgggggttaggaggttgagggagtttaactttgctttgttaggtaaatagtgttggaggatgttggtagatagagtagggttgtggtatagtgttctag 9668550  T
Q  493 ttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttctt 549  Q
    | || |||||||| ||||  | |||||||| | ||| |||||| |||||| ||||||    
T  9668551 tcgcccgttatggcgaggttggagggaggttggaggttgggggccggagttgttctt 9668607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 11460385 - 11460444
Alignment:
Q  25 ggactggtttcttgatcttctactattttgaatggttgattttgaatgagcaaaattgaa 84  Q
    |||| ||||||||||||||||||| | |||||| |||||| || ||||| ||||||||||    
T  11460385 ggaccggtttcttgatcttctactgtcttgaatagttgatcttaaatgaccaaaattgaa 11460444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 505
Target Start/End: Complemental strand, 15018351 - 15018260
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatgg 505  Q
    |||||||||||||| |||||||  |||||||| |||||| ||| ||| ||||| || || || |||||||| || || || |||||||||||    
T  15018351 gagtttaatattgccttattagggaaatggtgttggaggttgtcagtggataggggtggattttggtatagagttttagtcgctcgttatgg 15018260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 512
Target Start/End: Complemental strand, 28598598 - 28598519
Alignment:
Q  433 tagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggag 512  Q
    ||||||||||||| ||||| ||||| || |||||||| || ||||  ||||  |||||||| ||||||||| ||||||||    
T  28598598 tagaaaaatggtgttggagtatgttggtggatagagggggattataatataaagtgttggtagctcgttatagtgaggag 28598519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 22724908 - 22724974
Alignment:
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtata 483  Q
    |||||| |||| ||| ||| ||||||||| |||||||||||||| ||||| || ||||| |||||||    
T  22724908 tttaatgttgccttactaggaaaatggtgttggaggatgttagtggataggggtggtttttggtata 22724974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 482 - 560
Target Start/End: Complemental strand, 37445699 - 37445621
Alignment:
Q  482 tagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtggtgg 560  Q
    |||||||||||| ||| | ||||||| |||||   |||||| | |||||||||| |||||| ||||||| |||||||||    
T  37445699 tagggtgttggtggctaggtatggtgcggaggacaggaggttggaggatgggggccggagttgttcttcgtggtggtgg 37445621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 26146831 - 26146746
Alignment:
Q  472 gtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    |||| ||||||||||||||||| ||  | ||||| |||||||  ||||||| | ||| |||||| |||||||||| ||| ||||||    
T  26146831 gtttgtggtatagggtgttggtggcgagatatggcgaggaggatgggaggttggaggttgggggccggagtggttattcttggtgg 26146746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 33583798 - 33583931
Alignment:
Q  319 gagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtt 418  Q
    ||||| |||||||  | ||||||||||| ||||||| |||||    ||||||||||   |||||| ||||| | |||||||| ||| || |||| |||||    
T  33583798 gagggtgtgaggataacaggaaaatttcctggattgcttggagctctgtttgtttacaaaaggagtatggagggttgggggtaaggcagttgagggagtt 33583897  T
Q  419 taatattgctttattagaaaaatggtgatggagg 452  Q
    |||||| ||||| |||   |||||||| ||||||    
T  33583898 taatatagctttgttaagtaaatggtgttggagg 33583931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 34236460 - 34236428
Alignment:
Q  52 ttgaatggttgattttgaatgagcaaaattgaa 84  Q
    |||||||||||||||||||||| ||||||||||    
T  34236460 ttgaatggttgattttgaatgatcaaaattgaa 34236428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 1e-52; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 320 - 557
Target Start/End: Original strand, 5342584 - 5342821
Alignment:
Q  320 agggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttt 419  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||||  |||||||  ||||||||||| | ||||||||||| || ||||||| | ||||    
T  5342584 agggactgaggaacatatgaaaatttcttggattggttgaaaaaatagttgtttatataaggagcatgaaggtttgggggttgggcagatgagggcgttt 5342683  T
Q  420 aatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtaggga 519  Q
    || |||||||| |||| ||||||| |  |||| ||||||||||||||| |||||||||||||||| || || || |||||||||| | ||||||||| ||    
T  5342684 aacattgctttgttaggaaaatggagtaggagaatgttagttgatagaagaggtttatggtatagcgtatttgtggctcgttatgttaaggaggtagaga 5342783  T
Q  520 ggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    ||| | ||||| |||| |||||||||||||| ||||||    
T  5342784 ggttggaggataggggccggagtggttcttcgtggtgg 5342821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 151 - 509
Target Start/End: Original strand, 40512926 - 40513285
Alignment:
Q  151 attaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttc 250  Q
    |||||||||||| |||| || ||| | ||||||||||| |||||||| ||||| |||||  | ||||||||| |||||||| | ||||||||||||| ||    
T  40512926 attaaatctagactgttggggtggcaaagtcgttttctctcttttggaggtcggttggtccttcttaagtctgtcctgactgcattacctgtctatgctc 40513025  T
Q  251 tctacttcttcaa-actctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttcttg 349  Q
    | | |||||||||  ||| ||||||||||||||||   ||||| |||||||| |||||         |||||||||||||||| | ||||||||||| ||    
T  40513026 tttccttcttcaaggctccgtcaggtataatctctatcattgaatctctttttaataaatttttttggggagggagtgaggaaaacaggaaaatttcctg 40513125  T
Q  350 gattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatgg 449  Q
    | | | |||||    |||||| |||  ||||||| ||||  |||||||||| ||| || ||   || ||||||| |||||| ||||  |||||||| |||    
T  40513126 ggtagcttggagctctgtttgcttacgtaaggagtatgggggtttgggggtgaggaagttgcaggattttaatagtgctttgttaggtaaatggtgttgg 40513225  T
Q  450 aggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgag 509  Q
     ||||||| || |||||||| |||||||||||||||||  |||| ||||| |||||||||    
T  40513226 cggatgttggtggatagaggtggtttatggtatagggtcctggtagctcggtatggtgag 40513285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 362 - 467
Target Start/End: Complemental strand, 38774998 - 38774893
Alignment:
Q  362 aaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagtt 461  Q
    |||||||||||||| ||||||||||||| ||||||||||||||  |||||| |||||||| | |||||| |||||||||||||| |||||||||||||||    
T  38774998 aaatgtttgtttagataaggagcatggaggtttgggggttaggacgatgagggagtttaacactgctttgttagaaaaatggtgctggaggatgttagtt 38774899  T
Q  462 gataga 467  Q
    ||||||    
T  38774898 gataga 38774893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 15481188 - 15481292
Alignment:
Q  378 aaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttat 477  Q
    |||||||||||| |||||||||||||| || |||  ||||||||||||||||||||||  |||||||| ||||||||||||||||| |||| ||| || |    
T  15481188 aaggagcatggaggtttgggggttaggaagttgaaggagtttaatattgctttattaggtaaatggtgttggaggatgttagttgacagagaagggttgt 15481287  T
Q  478 ggtat 482  Q
    |||||    
T  15481288 ggtat 15481292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 24926118 - 24926222
Alignment:
Q  378 aaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttat 477  Q
    |||||||||||| | ||| |||||||| || ||| ||||||||||||||| ||| ||||||||||||| |||||||||||||| ||||||| |||||| |    
T  24926118 aaggagcatggagggttgagggttaggaagttgaaagagtttaatattgccttactagaaaaatggtgttggaggatgttagtggatagagaaggtttgt 24926217  T
Q  478 ggtat 482  Q
    |||||    
T  24926218 ggtat 24926222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 437 - 549
Target Start/End: Original strand, 25024333 - 25024445
Alignment:
Q  437 aaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggt 536  Q
    ||||||||| |||||||||||||| |||||||  ||||| ||||||||||||||||  ||| | ||||||||||||| |||||||| |  || |||||||    
T  25024333 aaaatggtgttggaggatgttagtggatagagatggtttttggtatagggtgttggaagctagatatggtgaggaggcagggaggttggcggttgggggt 25024432  T
Q  537 cggagtggttctt 549  Q
    |||||| ||||||    
T  25024433 cggagttgttctt 25024445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 378 - 482
Target Start/End: Complemental strand, 36709620 - 36709516
Alignment:
Q  378 aaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttat 477  Q
    |||||||||||| |||||||||||||| || |||  |||||||||||||||||| |||  |||||||| ||||||||||||||||| |||| ||| || |    
T  36709620 aaggagcatggaggtttgggggttaggaagttgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagttgacagagaagggttgt 36709521  T
Q  478 ggtat 482  Q
    |||||    
T  36709520 ggtat 36709516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 151 - 282
Target Start/End: Original strand, 5342435 - 5342565
Alignment:
Q  151 attaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttc 250  Q
    ||||||||||||||||  ||||||||||  ||||||||||| |||||| |||| ||| || |||||||||||||||| ||||| | |||| ||  ||||     
T  5342435 attaaatctagattgtccggttggaagaaccgttttctgtcgtttggtagtcgtttgattctccttaagtctatcctaacttcgtcacctatc--tgttt 5342532  T
Q  251 tctacttcttcaaa-ctctgtcaggtataatct 282  Q
    ||| |||||||||| ||  ||||||||||||||    
T  5342533 tctccttcttcaaagcttcgtcaggtataatct 5342565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 2365218 - 2365074
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||| | ||||| || || ||||| |||||||| ||| || | || |||||| |||||||| |  ||||||||||||     
T  2365218 gtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactgctctacctgtctatgc 2365119  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | |||||||||| ||| | |||||||||||||||| |||||    
T  2365118 actttccttcttcaaagctccgacaggtataatctcttccattga 2365074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 557
Target Start/End: Complemental strand, 44888599 - 44888435
Alignment:
Q  393 ttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttgg 492  Q
    |||||||| |||  |||||| ||||||||| || || | ||||  |||||||| |||||| | ||||||||||  ||  || | ||||||||||||||||    
T  44888599 ttgggggtgaggaggatgagggagtttaatgtttctctgttaggtaaatggtgttggaggttattagttgataagggtagtatgtggtatagggtgttgg 44888500  T
Q  493 ttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    | || ||||||||||||||||  ||||||| |  || || ||||||||||| |||||| ||||||    
T  44888499 tggcgcgttatggtgaggaggatgggaggttggtggttgagggtcggagtgtttcttcgtggtgg 44888435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 414 - 522
Target Start/End: Complemental strand, 53941977 - 53941869
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    |||||||||  ||||||||||| ||||||||| ||||||||||| || |||||||  || || ||||||| ||||||||| || || |||||||||||||    
T  53941977 gagtttaattatgctttattaggaaaatggtgttggaggatgttggtggatagagaggggttctggtataaggtgttggtggcgcggtatggtgaggagg 53941878  T
Q  514 tagggaggt 522  Q
      |||||||    
T  53941877 ctgggaggt 53941869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 151 - 487
Target Start/End: Complemental strand, 34830331 - 34829994
Alignment:
Q  151 attaaatctagattgtttggttggaagagtcgttttctgtcttttggtgg-tcgattggttatccttaagtctatcctgacttccttacctgtctatgtt 249  Q
    ||||||||||||||||  || ||| | ||||||||||| |||| ||| || ||| |||||  | ||||||||| |||||||    ||||||||||||| |    
T  34830331 attaaatctagattgtcggggtggcaaagtcgttttctctcttatggggggtcggttggtccttcttaagtctgtcctgaccgtgttacctgtctatgct 34830232  T
Q  250 ctctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttctt 348  Q
    || | |||||||    ||| |||||||||||||||| | ||||| ||| |||| |||||         |||||||||||||||  | ||||||||||| |    
T  34830231 ctttccttcttcctggctccgtcaggtataatctctgccattgaatctatttttaataatttttttt-gggagggagtgaggataacaggaaaatttcct 34830133  T
Q  349 ggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatg 448  Q
    |||||| |||||    ||||||||||  ||||||| ||||| | |||||||| ||| || ||   || ||||||| |||||| ||||  |||||||| ||    
T  34830132 ggattgcttggagctctgtttgtttacgtaaggagtatggagggttgggggtgaggaagttgcatgaatttaatagtgctttgttaggtaaatggtgttg 34830033  T
Q  449 gaggatgttagttgatagaggaggtttatggtatagggt 487  Q
    | ||||||| || |||| ||  || ||||||||||||||    
T  34830032 gcggatgttggtggatatagttgggttatggtatagggt 34829994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 317 - 543
Target Start/End: Complemental strand, 55367380 - 55367155
Alignment:
Q  317 gggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagag 416  Q
    |||||||||||||||  | ||||||||||| ||||| | ||||||  || |||||| |   |||||| ||||  ||| |||||| ||| || |||  ||     
T  55367380 gggagggagtgaggacaacaggaaaatttcctggatcgcttggaattatatttgttcacgaaaggagtatgggggtt-gggggtgaggaagttgaaggaa 55367282  T
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtag 516  Q
    |||||| |||| || |||| ||||||||| ||||||||||||||||||||||| || || ||||||| ||| ||| | ||  | ||||||||||||| ||    
T  55367281 tttaatcttgcgttgttaggaaaatggtgttggaggatgttagttgatagaggtgggttgtggtataaggttttgttagcgagatatggtgaggaggcag 55367182  T
Q  517 ggaggtcgaaggatgggggtcggagtg 543  Q
     ||||| | |||  ||||| |||||||    
T  55367181 agaggttggaggtagggggccggagtg 55367155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 409 - 514
Target Start/End: Complemental strand, 9510431 - 9510326
Alignment:
Q  409 tgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtga 508  Q
    |||| |||||||||||  || | |||| ||| ||||| ||||||||||||||| ||||||| ||||| |||||| ||||||||| |||  | ||||||||    
T  9510431 tgagggagtttaatatatctatgttaggaaagtggtgttggaggatgttagttaatagaggtggtttttggtatcgggtgttggctgcaaggtatggtga 9510332  T
Q  509 ggaggt 514  Q
    ||||||    
T  9510331 ggaggt 9510326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 409 - 514
Target Start/End: Complemental strand, 9518406 - 9518301
Alignment:
Q  409 tgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtga 508  Q
    |||| |||||||||||  || | |||| ||| ||||| ||||||||||||||| ||||||| ||||| |||||| ||||||||| |||  | ||||||||    
T  9518406 tgagggagtttaatatatctatgttaggaaagtggtgttggaggatgttagttaatagaggtggtttttggtatcgggtgttggctgcaaggtatggtga 9518307  T
Q  509 ggaggt 514  Q
    ||||||    
T  9518306 ggaggt 9518301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 52250648 - 52250733
Alignment:
Q  472 gtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    |||||||||||||||||||||| ||  | |||||||||||||  ||||||| | ||| |||||| |||||||||||||| ||||||    
T  52250648 gtttatggtatagggtgttggtggcgagatatggtgaggaggatgggaggttggaggttgggggccggagtggttcttcttggtgg 52250733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 414 - 550
Target Start/End: Complemental strand, 6825496 - 6825360
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    |||||||||||||| |||||||  |||||||| ||| |  |||| ||||| ||  |  |||||||||||||||||||||| || || |||||||||||||    
T  6825496 gagtttaatattgcgttattaggcaaatggtgttggcgtttgttggttgagaggagtagtttatggtatagggtgttggtggcgcggtatggtgaggagg 6825397  T
Q  514 tagggaggtcgaaggatgggggtcggagtggttcttc 550  Q
      ||||||| |  || |||||| ||||| ||||||||    
T  6825396 atgggaggttggcggttgggggccggagaggttcttc 6825360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 184 - 522
Target Start/End: Complemental strand, 31675836 - 31675497
Alignment:
Q  184 tttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttctctacttcttcaaa-ctctgtcaggtataatct 282  Q
    ||||| |||||||| ||||| |||||| | || |||||| ||||||| || || ||||||||||  || | |||||||||| ||| ||||||||||||||    
T  31675836 tttctctcttttgggggtcggttggttctactcaagtctgtcctgacctcattgcctgtctatgccctttccttcttcaaagctccgtcaggtataatct 31675737  T
Q  283 cttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaagga 382  Q
    ||   ||||| ||| |||| ||||          |||||||||||||||  | |||||||| || ||| | | ||| ||   ||||||||||   |||||    
T  31675736 ctgtcattgaatctatttttaatattttttttttgggagggagtgaggataacaggaaaatctcctgggtcgcttgaaactctgtttgtttacgaaagga 31675637  T
Q  383 gcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtat 482  Q
    | ||||| | || ||||| ||  || |||| ||||||||   |||||| ||||  |||||||| ||| | ||||| || |||||||| ||||| ||||||    
T  31675636 gtatggagggttaggggtgagacagttgagggagtttaaccatgctttgttaggtaaatggtgttggcgaatgttggtggatagaggtggtttttggtat 31675537  T
Q  483 agggtgttggttgctcgttatggtgaggaggtagggaggt 522  Q
    |||||| |||| |   | ||||||||||||| ||||||||    
T  31675536 agggtgctggtggtgagatatggtgaggaggcagggaggt 31675497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 34332015 - 34332159
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||| | ||||| || || ||||| |||||||| ||| || | || |||||| |||||||| |  ||||||||||||     
T  34332015 gtattaaatctagattgtctggttggcaaagtcggttcctttctttcggtggtcgtttgattctactaaagtctgtcctgactgctctacctgtctatgc 34332114  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | ||| || ||| ||| |||||||||||||||||| |||||    
T  34332115 actttccttttttaaagctccgtcaggtataatctcttccattga 34332159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 321 - 482
Target Start/End: Original strand, 21739896 - 21740057
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagat-gagagagttt 419  Q
    ||||||||||| | | |||||||| ||||||| |||||||| | | | ||||   | ||||||  |||| | |||||||| ||| |||| ||| ||||||    
T  21739896 gggagtgaggaccgtcggaaaattacttggataggttggaatactttgtgttcttcaaaggagtctggagggttgggggtaagg-agattgagggagttt 21739994  T
Q  420 aatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtat 482  Q
    ||| ||||||| ||||  |||||||| ||||||||||| || ||||||| |||||||||||||    
T  21739995 aattttgctttgttaggtaaatggtgttggaggatgttggtagatagagtaggtttatggtat 21740057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 321 - 491
Target Start/End: Original strand, 22734096 - 22734266
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    ||||||||||| ||||||||||| |||||| |  ||||||| | |||||||||   ||||||| ||||| | |||| ||| ||| || | || || ||||    
T  22734096 gggagtgaggatcataggaaaatatcttggttacgttggaatattgtttgtttgcgtaaggagtatggaggattggaggtgaggaagttaagggaattta 22734195  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttg 491  Q
    ||||||||||| |||  |||||||| |||  | ||||||| ||||||||  || | | |||||||||||||    
T  22734196 atattgctttactaggtaaatggtgttggtagttgttagtcgatagaggtagtctgttgtatagggtgttg 22734266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 337 - 557
Target Start/End: Original strand, 14863854 - 14864074
Alignment:
Q  337 ggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagat-gagagagtttaatattgctttattag 435  Q
    |||||||| ||||||| |||||||| | | | ||||   ||||||||  |||| | |||||||||||| |||| ||| ||||||||| |||| || ||||    
T  14863854 ggaaaattacttggataggttggaatactttatgttcttctaaggagtctggagggttgggggttagg-agattgagggagtttaattttgcattgttag 14863952  T
Q  436 aaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatggggg 535  Q
      |||||||| ||||||||||| || |||| || ||||||||||||||| ||  | || ||  ||||||| |||| ||  ||||||| | |||  |||||    
T  14863953 gtaaatggtgttggaggatgttggtcgataaagtaggtttatggtatagtgttcttgtcgcctgttatggcgaggtgggtgggaggttggaggtgggggg 14864052  T
Q  536 tcggagtggttcttcatggtgg 557  Q
     |||||| ||||||| ||||||    
T  14864053 ccggagttgttcttcttggtgg 14864074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 42674869 - 42674973
Alignment:
Q  378 aaggagcatggaagtttgggggttaggtagat-gagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggttta 476  Q
    |||||||||||| |||||| ||| ||| |||| ||  ||||||||||||| |||| |||  |||||||| |||||||||||||||||||||| ||| ||     
T  42674869 aaggagcatggaggtttggaggtgagg-agattgaaggagtttaatattgttttactaggtaaatggtgttggaggatgttagttgatagagaagggttg 42674967  T
Q  477 tggtat 482  Q
    ||||||    
T  42674968 tggtat 42674973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 487
Target Start/End: Original strand, 6175678 - 6176017
Alignment:
Q  150 tattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgtt 249  Q
    ||||||||||||| |||  |||||||| ||||| ||||| |||||||||||||| |||||| | || || ||| || |||| ||  | ||||||||||      
T  6175678 tattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacatctctgcctgtctatgca 6175777  T
Q  250 ctctacttcttc-aaactctgtcaggtataatctcttctattgagtctcttttaaataa-nnnnnnnnngggagggagtgaggaacataggaaaatttct 347  Q
    || | ||||||| ||||||   ||||||||||||| |||||||| ||| | |||| |||          ||| |||||||||||  ||||||||||||||    
T  6175778 ctttccttcttcaaaactccaacaggtataatctcctctattgaatctttgttaattaatttttttttggggggggagtgaggataataggaaaatttct 6175877  T
Q  348 tggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgat 447  Q
    ||| |  ||||| ||| ||||||||||    | ||| || |  ||||||||||  || |  |||  ||||||||| | ||||| |||| ||||||||| |    
T  6175878 tggttaagttggcaaactgtttgtttaaaacatgagtattgcggtttgggggtgcggaaattgaaggagtttaatttagctttgttaggaaaatggtgtt 6175977  T
Q  448 ggaggatgttagttgatagaggaggtttatggtatagggt 487  Q
    || ||||| | || || ||||| ||||| |||||||||||    
T  6175978 ggcggatgctggtggacagaggtggtttgtggtatagggt 6176017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 19919429 - 19919573
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||| | ||||| ||||| ||||| |||||||| ||| || | || ||||   |||| ||| |  ||||||||||||     
T  19919429 gtattaaatctagattgtctggttggcaaagtcggtttctatctttcggtggtcgtttgattctactaaagttcgtcctaactgctctacctgtctatgc 19919528  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | |||||||||| ||| | |||||||||||||||| |||||    
T  19919529 actttccttcttcaaagctccgacaggtataatctcttccattga 19919573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 1106505 - 1106560
Alignment:
Q  29 tggtttcttgatcttctactattttgaatggttgattttgaatgagcaaaattgaa 84  Q
    |||||||||||||||||| | || ||||||||||||||||| ||| ||||||||||    
T  1106505 tggtttcttgatcttctattcttgtgaatggttgattttgattgatcaaaattgaa 1106560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 151 - 301
Target Start/End: Original strand, 17270944 - 17271095
Alignment:
Q  151 attaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttc 250  Q
    ||||| |||| |||||| |||||||| ||||||||||| |||||||| ||||| ||| || | || |||||| ||||||| ||  | | |||||| | ||    
T  17270944 attaattctaaattgttcggttggaaaagtcgttttctctcttttgggggtcgtttgatttttctgaagtctgtcctgacctctcttcatgtctacgctc 17271043  T
Q  251 tctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctctttt 301  Q
    | | ||| ||||||  ||||||||||||||||| ||| ||||| ||| ||||    
T  17271044 ttttctttttcaaagttctgtcaggtataatctgttccattgaatctatttt 17271095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 616
Target Start/End: Complemental strand, 38774301 - 38774266
Alignment:
Q  581 ggttagagactactcaacatctgtttttgtcttgtc 616  Q
    ||||||||||||||||||||||||||||||||||||    
T  38774301 ggttagagactactcaacatctgtttttgtcttgtc 38774266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 505
Target Start/End: Complemental strand, 45684850 - 45684759
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatgg 505  Q
    |||||||||||||||||| |||  |||||||| |||||||||||||| ||||||| |||  | ||||||  ||| || || |||||||||||    
T  45684850 gagtttaatattgctttactaggtaaatggtgttggaggatgttagtcgatagagaagggctgtggtatcaggttttagtcgctcgttatgg 45684759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 491
Target Start/End: Original strand, 12341716 - 12341798
Alignment:
Q  409 tgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttg 491  Q
    ||||||||||||| |||||||| || |  |||||||| ||| || ||||||||||||| |||||||| |||  ||||||||||    
T  12341716 tgagagagtttaacattgctttgttggggaaatggtgttggcggctgttagttgataggggaggtttgtggagtagggtgttg 12341798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 507
Target Start/End: Original strand, 48569500 - 48569598
Alignment:
Q  409 tgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtg 507  Q
    ||||||||||||| ||||||||  |||| |||||||| ||| || |||||||||||||||  || || |||  |||||||||||| ||| | |||||||    
T  48569500 tgagagagtttaacattgctttgctagagaaatggtgttggcggttgttagttgatagagatgggttgtggcgtagggtgttggtggctaggtatggtg 48569598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 962365 - 962522
Alignment:
Q  151 attaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttc 250  Q
    |||||| ||||||||| ||||||| | ||||| || || ||||||||||| || ||| |  | || || ||| |||||||| |  | |||||||||| ||    
T  962365 attaaagctagattgtctggttggcatagtcggttcctttcttttggtggccggttgatccttctcaaatctgtcctgactgcacttcctgtctatgctc 962464  T
Q  251 tctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataa 307  Q
    | | ||| |||||| ||| |||||||||||||||||| ||||| ||| | ||||||||    
T  962465 tttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgttaaataa 962522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 432 - 549
Target Start/End: Complemental strand, 35537424 - 35537307
Alignment:
Q  432 ttagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatg 531  Q
    |||||||| ||||| |||||||| ||||||||||| |||||||| ||||||||  |||||| | ||   | ||||||||||| | |||| | | ||| ||    
T  35537424 ttagaaaagtggtgttggaggattttagttgatagtggaggtttttggtatagattgttggcttctaagtgtggtgaggaggcaaggagattggaggttg 35537325  T
Q  532 ggggtcggagtggttctt 549  Q
    |||| ||||||| |||||    
T  35537324 ggggccggagtgattctt 35537307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 557
Target Start/End: Original strand, 962624 - 962772
Alignment:
Q  409 tgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtga 508  Q
    |||| ||||||||||||||||| |||| ||||||||| |||||| ||||||| || ||||  || || |||  ||||||||| || ||| | |||||||     
T  962624 tgagggagtttaatattgctttgttaggaaaatggtgttggaggttgttagtagagagagatgggttgtggcgtagggtgttagtggctaggtatggtgg 962723  T
Q  509 ggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    || ||  ||  | | | ||||||||||||||||| |||| || ||||||    
T  962724 ggcggatggtggtttggaggatgggggtcggagttgttcatcttggtgg 962772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 409 - 505
Target Start/End: Complemental strand, 10868282 - 10868186
Alignment:
Q  409 tgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatgg 505  Q
    |||| ||||||||| ||||||| ||||  |||||||| ||||||||||| || ||||||| |||||| || ||||| ||  | || |||||||||||    
T  10868282 tgagggagtttaattttgctttgttaggtaaatggtgttggaggatgttggtagatagagtaggtttctgatatagtgttctagtcgctcgttatgg 10868186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 513
Target Start/End: Original strand, 52907708 - 52907780
Alignment:
Q  441 tggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    ||||| ||||| ||||||||||||||||  || || |||||||||||||| || || ||||| ||||||||||    
T  52907708 tggtgttggagaatgttagttgatagagaggggttgtggtatagggtgttagtggcccgttacggtgaggagg 52907780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 559
Target Start/End: Complemental strand, 48930342 - 48930255
Alignment:
Q  472 gtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtggtg 559  Q
    |||||||||||||||| ||||| ||  | |||||||||||||  ||||||| | ||| ||||||  ||||||||||| | ||||||||    
T  48930342 gtttatggtatagggttttggtggcgagatatggtgaggaggatgggaggttggaggttgggggctggagtggttctgcgtggtggtg 48930255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 19875869 - 19875788
Alignment:
Q  462 gatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtg 543  Q
    |||||||| || || ||||||||||||||||| ||  | ||||||||||||| | |||||| | ||| |||||| |||||||    
T  19875869 gatagaggtgggttttggtatagggtgttggtggcgagatatggtgaggaggcaaggaggttggaggttgggggccggagtg 19875788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 31920828 - 31920925
Alignment:
Q  425 tgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggt 522  Q
    |||||| ||||  |||||||| ||| | ||||| || |||||||| ||||| |||||||||||| |||| |   | ||||||||||||| ||||||||    
T  31920828 tgctttgttaggtaaatggtgttggcgaatgttggtggatagaggtggtttttggtatagggtgctggtggtgagatatggtgaggaggcagggaggt 31920925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 493
Target Start/End: Complemental strand, 18381705 - 18381653
Alignment:
Q  441 tggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggt 493  Q
    ||||| ||||| ||||| |||||||||||||| ||||||||| |||| |||||    
T  18381705 tggtgttggagaatgttggttgatagaggagggttatggtattgggttttggt 18381653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 8e-38; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 317 - 549
Target Start/End: Complemental strand, 20918730 - 20918499
Alignment:
Q  317 gggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagag 416  Q
    |||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||  ||||||  | || | |||||| ||||| | |||   |||    
T  20918730 gggagggagtgaggataataggaaaatttcttgcattggttggaaaaatgtttgtttaggaaaggagtctagagggttgggg-ttaggaaaatgcaggag 20918632  T
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtag 516  Q
    ||||| | ||||||  ||| ||||||||| | |||| ||||||| |||||||||||||| |||||||||||| | ||  |||||||||||||| ||| ||    
T  20918631 tttaacactgctttgctaggaaaatggtgttcgaggttgttagtagatagaggaggtttgtggtatagggtgctagtaactcgttatggtgagaaggcag 20918532  T
Q  517 ggaggtcgaaggatgggggtcggagtggttctt 549  Q
    |||||| |   | ||||||||||||||||||||    
T  20918531 ggaggttgccagttgggggtcggagtggttctt 20918499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 339 - 519
Target Start/End: Complemental strand, 23811737 - 23811557
Alignment:
Q  339 aaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaa 438  Q
    ||||||| ||||||||||||||||||||||||||||   || |||| |||  | ||  | |||||| |||||||||||||||| ||| |||| ||||| |    
T  23811737 aaaatttattggattggttggaaaaatgtttgtttacgaaaagagcttggcgggttatgagttaggcagatgagagagtttaacatttctttgttagata 23811638  T
Q  439 aatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtaggga 519  Q
    ||||||| |||||| ||||||| || | | ||||||| ||||||||| ||||||| |||||||| |||||||||| |||||    
T  23811637 aatggtgctggaggttgttagtagacatatgaggtttgtggtataggttgttggtagctcgttacggtgaggaggcaggga 23811557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 367 - 549
Target Start/End: Original strand, 19544821 - 19545003
Alignment:
Q  367 tttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatag 466  Q
    ||||||||  ||||||| ||||| | || ||||| ||| || |||| |||||||||| ||| |||||||  |||||||| ||| ||||||| || |||||    
T  19544821 tttgtttacgtaaggagtatggagggttaggggtcaggcagttgagggagtttaatagtgccttattaggcaaatggtgttggcggatgttggtggatag 19544920  T
Q  467 aggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttctt 549  Q
    ||  || || ||||||||||||||||   | || ||||||||||||| || ||||| | ||| |||||| |||||||||||||    
T  19544921 agatgggttttggtatagggtgttggcgacacgatatggtgaggaggcagagaggttggaggttgggggccggagtggttctt 19545003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 432 - 522
Target Start/End: Original strand, 23054455 - 23054545
Alignment:
Q  432 ttagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggt 522  Q
    |||| ||||||||| | |||||||||||||||||||||||| || ||||||||||||||||  ||| |  |||||||||||| ||||||||    
T  23054455 ttaggaaaatggtgttagaggatgttagttgatagaggagggttttggtatagggtgttggcggctagacatggtgaggaggcagggaggt 23054545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 381 - 557
Target Start/End: Complemental strand, 18671877 - 18671701
Alignment:
Q  381 gagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggt 480  Q
    ||||||||| |||||| ||||||| || |||  || |||||| |||||||| |||  |||||||| |||||||||||||||||||||| ||| || ||||    
T  18671877 gagcatggaggtttggtggttaggaagttgaaggaatttaatgttgctttactaggtaaatggtgttggaggatgttagttgatagagcagggttgtggt 18671778  T
Q  481 atagggtgttggttgctcgttatggtg-aggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    ||   || || || ||||||||||| | || |||| ||||||| | |||  ||||| ||||||| |||||||||||||    
T  18671777 atcatgttttagtcgctcgttatggcgaagtaggt-gggaggttggaggtggggggccggagtgtttcttcatggtgg 18671701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 149 - 510
Target Start/End: Original strand, 37942054 - 37942413
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||| |||||||||  |||||||||||| | ||| |||| ||| ||||||  |||||| |||| |||| |  |||  |||| ||||||||||||||    
T  37942054 gtattaaaactagattgtcgggttggaagagtagatttttgtcctttagtggtcacttggttctcctaaagttttccctatcttctttacctgtctatgt 37942153  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttct 347  Q
      | | |||||||||| | | ||| ||||| ||||||| |||||| |||||||||| |||         |||||| |||||||| | ||||||||| |||    
T  37942154 catttccttcttcaaagccccgtcgggtattatctcttatattgaatctcttttaattaaatttatttcgggaggaagtgaggatcttaggaaaatatct 37942253  T
Q  348 tggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgat 447  Q
    |||||   ||| |||| | |||||||    |||||| | ||| | |||||||||||| | |||  |||| ||||| |  || | ||||  |||||||| |    
T  37942254 tggataaattgaaaaactatttgtttgagaaaggaggaaggagggttgggggttaggaaaatgcaagagcttaatttgactattttaggtaaatggtgtt 37942353  T
Q  448 ggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgagg 510  Q
    ||||||| ||||| ||||   | || ||||| |||| ||||||||| ||||||||||||||||    
T  37942354 ggaggattttagtcgata---gggggttatgatataaggtgttggtagctcgttatggtgagg 37942413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 437 - 513
Target Start/End: Complemental strand, 4344469 - 4344393
Alignment:
Q  437 aaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    ||||||||| ||||||||| ||| |||||||   |||||||||||||||||||| || |||||||||||||||||||    
T  4344469 aaaatggtgttggaggatgctagatgatagaaatggtttatggtatagggtgttagtggctcgttatggtgaggagg 4344393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 4937328 - 4937472
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||| | ||||| || || ||||| |||||||| ||| || | || |||||| |||||||| |  ||||||||||||     
T  4937328 gtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactgctctacctgtctatgc 4937427  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | |||||||||| ||| | |||||||||||||||| |||||    
T  4937428 actttccttcttcaaagctccgacaggtataatctcttccattga 4937472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 557
Target Start/End: Complemental strand, 17056224 - 17056060
Alignment:
Q  393 ttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttgg 492  Q
    |||||||| |||  |||||| ||||||||| || || | ||||  |||||||| |||||| | ||||||||||  ||  || | ||||||||||||||||    
T  17056224 ttgggggtgaggaggatgagggagtttaatgtttctctgttaggtaaatggtgttggaggttattagttgataagggtagtatgtggtatagggtgttgg 17056125  T
Q  493 ttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    | || ||||||||||||||||  ||||||| |  || |||||| ||||||| |||||| ||||||    
T  17056124 tggcgcgttatggtgaggaggatgggaggttggtggttgggggccggagtgtttcttcgtggtgg 17056060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 438 - 522
Target Start/End: Complemental strand, 20349613 - 20349529
Alignment:
Q  438 aaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggt 522  Q
    |||||||| |||| |||||| || ||||||| | | |||||||||||||||||||| ||||| ||||||||||||| ||||||||    
T  20349613 aaatggtgctggatgatgttggtagatagagaaaggttatggtatagggtgttggtggctcggtatggtgaggaggcagggaggt 20349529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 409 - 549
Target Start/End: Complemental strand, 34104156 - 34104016
Alignment:
Q  409 tgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtga 508  Q
    |||| |||||||||| ||  ||| |||| |||||||| |||||||||||  | |||| ||  || || ||||||||||||||||| || ||||| |||||    
T  34104156 tgagggagtttaatagtgtcttactagacaaatggtgctggaggatgttgatggataaagaggggttttggtatagggtgttggtggcgcgttacggtga 34104057  T
Q  509 ggaggtagggaggtcgaaggatgggggtcggagtggttctt 549  Q
    ||||| | |||||| | ||||||||||  ||||||||||||    
T  34104056 ggaggcaaggaggttggaggatgggggctggagtggttctt 34104016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 385 - 547
Target Start/End: Complemental strand, 11341500 - 11341337
Alignment:
Q  385 atggaagtttgggggttaggtagatgagagagtttaatatt-gctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtata 483  Q
    ||||| |||||||||||| |  | |||| ||||||||| || ||| | |||| ||||||||| ||||||||||| ||| |||||   || || |||||||    
T  11341500 atggaggtttgggggttacgcggttgagggagtttaattttagctatgttaggaaaatggtgttggaggatgttggtttatagatagggattttggtata 11341401  T
Q  484 gggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttc 547  Q
    ||||||||| |||| | ||||||||||||| |||||||| | |||  ||||| |||||| ||||    
T  11341400 gggtgttggctgctaggtatggtgaggaggcagggaggttggaggtcgggggccggagttgttc 11341337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 548
Target Start/End: Original strand, 13553629 - 13553784
Alignment:
Q  393 ttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttgg 492  Q
    ||||||||||||  | |||| ||||||||| ||||||| ||||| |||||||| ||||||||||| || ||||||| ||| || |||||||| ||  | |    
T  13553629 ttgggggttaggaggttgagggagtttaattttgctttgttagataaatggtgttggaggatgttggtagatagagtagggttgtggtatagtgttctag 13553728  T
Q  493 ttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttct 548  Q
    | || |||||||| ||||  | |||||||| | ||| |||||| |||||| |||||    
T  13553729 tcgcccgttatggcgaggttggagggaggttggaggttgggggccggagttgttct 13553784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 482
Target Start/End: Complemental strand, 18768110 - 18768014
Alignment:
Q  386 tggaagtttgggggttaggtagat-gagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtat 482  Q
    |||| |||||||||||||| |||| ||  |||||||||||||||||| |||  |||||||| |||||||||||||||||||||| ||| || ||||||    
T  18768110 tggaggtttgggggttagg-agattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagttgatagagaagggttgtggtat 18768014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 510
Target Start/End: Complemental strand, 45993342 - 45993153
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    ||||||||||| ||||||||||| |||||||| ||||||||   ||||||| |    ||||||  |||| | || ||||||||  || |||  |||||||    
T  45993342 gggagtgaggatcataggaaaatgtcttggataggttggaactctgtttgtctccagaaggagtttggagggttaggggttagacagttgaaggagttta 45993243  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgagg 510  Q
    || |||| ||| |||  |||||||| |||||||||||||| ||||| || ||||| |||||||| || || || || |||||||| ||||    
T  45993242 atgttgcattactagggaaatggtgttggaggatgttagtggataggggtggtttttggtatagagttttagtcgcccgttatggcgagg 45993153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 481
Target Start/End: Complemental strand, 5327458 - 5327370
Alignment:
Q  393 ttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggta 481  Q
    ||||| |||||| || |||  ||||||||| |||||||| |||  |||||||| |||||||||||||| ||||||| ||||||||||||    
T  5327458 ttgggagttaggaagttgaaggagtttaatcttgctttactagggaaatggtgttggaggatgttagtggatagagaaggtttatggta 5327370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 474 - 557
Target Start/End: Original strand, 25018844 - 25018927
Alignment:
Q  474 ttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    |||||||||||||||||||| ||  | |||||||||||||  ||||||| | ||| ||||||||| ||||||||||| ||||||    
T  25018844 ttatggtatagggtgttggtggcaagatatggtgaggaggctgggaggttggaggttgggggtcgaagtggttcttcttggtgg 25018927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 482
Target Start/End: Original strand, 34457590 - 34457692
Alignment:
Q  380 ggagcatggaagtttgggggttaggtagat-gagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatg 478  Q
    |||||||||| |||||||||||||| |||| ||  |||||||||||||||||| |||  |||||||| |||  ||||||||||||||||| ||| || ||    
T  34457590 ggagcatggaggtttgggggttagg-agattgaaggagtttaatattgctttactaggtaaatggtgttgggtgatgttagttgatagagaagggttgtg 34457688  T
Q  479 gtat 482  Q
    ||||    
T  34457689 gtat 34457692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 36227580 - 36227683
Alignment:
Q  378 aaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttat 477  Q
    |||||||||||| | |||||| ||||| |  |||  ||||||||| |||||||| |||  || ||||  |||||||||||||||||||||| ||||||||    
T  36227580 aaggagcatggagggttggggtttaggaaattgaaggagtttaatgttgctttactaggtaagtggtattggaggatgttagttgatagagaaggtttat 36227679  T
Q  478 ggta 481  Q
    ||||    
T  36227680 ggta 36227683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 292
Target Start/End: Complemental strand, 17721565 - 17721431
Alignment:
Q  159 tagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttctctacttc 258  Q
    |||||||| ||||||| | ||||| || || |||||||||||||| |||||| | |||||||   |||||||| |  ||||||||||||  || | |||     
T  17721565 tagattgtctggttggcaaagtcggttcctttcttttggtggtcgtttggttcttcttaagttcgtcctgactgctctacctgtctatgcactttccttt 17721466  T
Q  259 ttcaaa-ctctgtcaggtataatctcttctattga 292  Q
    |||||| ||| |||||||||||||||||| |||||    
T  17721465 ttcaaagctccgtcaggtataatctcttccattga 17721431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 42951391 - 42951449
Alignment:
Q  26 gactggtttcttgatcttctactattttgaatggttgattttgaatgagcaaaattgaa 84  Q
    ||||| |||||||||||| |||| | |||||||||||||||||||||| ||||||||||    
T  42951391 gactgatttcttgatcttttactgtcttgaatggttgattttgaatgatcaaaattgaa 42951449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 481
Target Start/End: Complemental strand, 41340207 - 41340140
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggta 481  Q
    ||||||||| |||||||| |||  |||||||| |||||||||||||| ||||||| |||||| |||||    
T  41340207 gagtttaattttgctttactagggaaatggtgttggaggatgttagtggatagagaaggtttgtggta 41340140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 513
Target Start/End: Complemental strand, 29916737 - 29916671
Alignment:
Q  447 tggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    |||||||||||||| || ||| | || |||||||| ||||| ||||| |||||||||||||||||||    
T  29916737 tggaggatgttagtggacagaaggggcttatggtacagggtattggtagctcgttatggtgaggagg 29916671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 492
Target Start/End: Original strand, 33821025 - 33821103
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttgg 492  Q
    ||||||||||| |||||||||||||||||||| ||||||||| | || || ||||  || || ||||||||||| ||||    
T  33821025 gagtttaatatagctttattagaaaaatggtgttggaggatgctggtagacagagatgggttctggtatagggttttgg 33821103  T

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Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 39658864 - 39658962
Alignment:
Q  425 tgctttattagaaaaatggtgatggaggatgttagttgataga-ggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggt 522  Q
    |||||||||||  |||||||| ||||||||||| || |||||| || || || | ||||||||||||||| || || |||||||||||||  |||||||    
T  39658864 tgctttattagggaaatggtgttggaggatgttggtggatagagggggggttctagtatagggtgttggtggcgcggtatggtgaggaggctgggaggt 39658962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 441 - 522
Target Start/End: Original strand, 12308615 - 12308696
Alignment:
Q  441 tggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggt 522  Q
    ||||| ||||||||| ||||||||||  ||| ||| |||||||||||||||| |||  | ||||||||||||| | ||||||    
T  12308615 tggtgttggaggatgctagttgataggagagatttttggtatagggtgttggctgcaaggtatggtgaggaggcatggaggt 12308696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 407 - 492
Target Start/End: Original strand, 32815774 - 32815859
Alignment:
Q  407 gatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttgg 492  Q
    |||||| ||||||||||||||| | |||||||||||||| ||||||||| | |  |||||||| || || ||||  ||||||||||    
T  32815774 gatgagggagtttaatattgctcttttagaaaaatggtgttggaggatgatggcggatagaggggggttgtggttcagggtgttgg 32815859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 548
Target Start/End: Original strand, 6335912 - 6336004
Alignment:
Q  456 ttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttct 548  Q
    ||||| ||||||||||| ||||||||| |||||||||||||| | ||||||| |   |  ||||||| | |||||||||| | ||||||||||    
T  6335912 ttagtagatagaggagggttatggtatcgggtgttggttgctaggtatggtgtgcgcgatgggaggttggaggatgggggccagagtggttct 6336004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 453 - 549
Target Start/End: Original strand, 17504064 - 17504160
Alignment:
Q  453 atgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttctt 549  Q
    ||||||||||||||||  ||| | |||||| | |||||||| ||  | || ||||||||||  ||||||| | |||||||||| |||||||||||||    
T  17504064 atgttagttgatagagatggtctttggtatcgagtgttggtggcgagatacggtgaggaggatgggaggttggaggatgggggccggagtggttctt 17504160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 453 - 549
Target Start/End: Complemental strand, 17549150 - 17549054
Alignment:
Q  453 atgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttctt 549  Q
    ||||||||||||||||  ||| | |||||| | |||||||| ||  | || ||||||||||  ||||||| | |||||||||| |||||||||||||    
T  17549150 atgttagttgatagagatggtctttggtatcgagtgttggtggcgagatacggtgaggaggatgggaggttggaggatgggggccggagtggttctt 17549054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 29968914 - 29968770
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||  ||||||| | ||||| || || || || ||||| || ||| || | || |||||  |||||||| |  ||||||||||||     
T  29968914 gtattaaatctagattggctggttggcaaagtcggttcctttccttcggtggccgtttgattcttctaaagtccgtcctgactgctctacctgtctatgc 29968815  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
    ||| | ||| |||||| ||| |||||||||||||||||| |||||    
T  29968814 tctttcctttttcaaagctccgtcaggtataatctcttccattga 29968770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 6335777 - 6335816
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttgga 360  Q
    |||||||||||||||||||||||||||||| | |||||||    
T  6335777 gggagtgaggaacataggaaaatttcttgggtaggttgga 6335816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 543
Target Start/End: Original strand, 27218591 - 27218717
Alignment:
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtag 516  Q
    |||||| | ||||| ||||  |||||||| ||| || ||||  | |||||||| || || ||||||||||||||||| ||  | ||||||||||||| ||    
T  27218591 tttaatttagctttgttaggtaaatggtgttggcggttgttgatagatagaggtggattttggtatagggtgttggtggcgagatatggtgaggaggcag 27218690  T
Q  517 ggaggtcgaaggatgggggtcggagtg 543  Q
    |||||| |  || |||||| |||||||    
T  27218691 ggaggttggcggttgggggccggagtg 27218717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 2820012 - 2820065
Alignment:
Q  240 tgtctatgttctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
    |||||||||||| | |||||||||| | | ||||||||||||||||||||||||    
T  2820012 tgtctatgttctttccttcttcaaagccccgtcaggtataatctcttctattga 2820065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 13440998 - 13440937
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggtt 210  Q
    |||||||||||||| |||  |||||||| ||||| ||||| |||| ||||||||| ||||||    
T  13440998 gtattaaatctagactgtcgggttggaatagtcggtttctctcttgtggtggtcgcttggtt 13440937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 19735191 - 19735122
Alignment:
Q  415 agtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatag 484  Q
    |||||||| |||| || ||||  |||||||| ||||||||||| || ||||||| |||||| ||||||||    
T  19735191 agtttaattttgcattgttaggtaaatggtgttggaggatgttggtcgatagagtaggtttgtggtatag 19735122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 23741177 - 23741120
Alignment:
Q  27 actggtttcttgatcttctactattttgaatggttgattttgaatgagcaaaattgaa 84  Q
    ||||||||||||| |||||||  | |||||||||||||||| ||| | ||||||||||    
T  23741177 actggtttcttgaacttctacgttcttgaatggttgattttaaattatcaaaattgaa 23741120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 498
Target Start/End: Original strand, 32482470 - 32482559
Alignment:
Q  409 tgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctc 498  Q
    ||||||| |||||| | ||| ||||||  || ||||| |||||||||||||| |||| ||  ||||| ||| ||||||||||||| ||||    
T  32482470 tgagagaatttaatttggctctattagggaagtggtgttggaggatgttagtagatatagagggtttgtggaatagggtgttggtggctc 32482559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 438 - 522
Target Start/End: Original strand, 8752886 - 8752970
Alignment:
Q  438 aaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggt 522  Q
    |||| ||| ||||||||||| || |||||||||||  | |||||||||||| |||| ||  | |||||||||||||  |||||||    
T  8752886 aaatagtgctggaggatgttggtggatagaggagggatgtggtatagggtgctggtggcgagatatggtgaggaggctgggaggt 8752970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 513
Target Start/End: Original strand, 22819246 - 22819282
Alignment:
Q  477 tggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    ||||||||||||||||| || ||||||||||||||||    
T  22819246 tggtatagggtgttggtagcgcgttatggtgaggagg 22819282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 5e-30; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 323 - 522
Target Start/End: Original strand, 26262251 - 26262450
Alignment:
Q  323 gagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaat 422  Q
    |||||| || |||||||||||||||  |||||||||||||  ||||||||||   |||||  ||| | | ||| || | ||  ||||||| |||||||||    
T  26262251 gagtgaagatcataggaaaatttctatgattggttggaaagctgtttgtttaagaaaggaatatgaagggttgaggttaagagagatgagggagtttaat 26262350  T
Q  423 attgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggt 522  Q
    | |||||| |||| ||||||||| ||||||||||||||  |||||| |||||| ||||||||||||||  |||||| ||||||||||||||  |||||||    
T  26262351 actgctttgttaggaaaatggtgttggaggatgttagtaaatagagtaggtttttggtatagggtgttacttgctcattatggtgaggaggatgggaggt 26262450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 333 - 513
Target Start/End: Original strand, 26262816 - 26262996
Alignment:
Q  333 cataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttat 432  Q
    |||||||||||||||| ||||| |||||||  ||||||||||   |||||   || | | ||| |||| ||| ||||||| |||||||||  |||||| |    
T  26262816 cataggaaaatttctttgattgtttggaaagttgtttgtttaagaaaggaatgtgaagggttgagggtaagggagatgagggagtttaatcctgctttgt 26262915  T
Q  433 tagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    ||| ||||||||  ||||||||||||||  |||||| |||||| | |||||||||||| ||||||||||||||||||||||    
T  26262916 taggaaaatggtattggaggatgttagtaaatagagtaggttttttgtatagggtgttagttgctcgttatggtgaggagg 26262996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 224 - 513
Target Start/End: Original strand, 26261593 - 26261885
Alignment:
Q  224 tcctgacttccttacctgtctatgttctctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagg 322  Q
    ||||||||||  || ||||||||| ||| | |||||||||| |||  ||||||||||||||||||||||| | | |||| |||||         ||| ||    
T  26261593 tcctgacttctctatctgtctatgctctttccttcttcaaagctccttcaggtataatctcttctattgaatttattttgaataatttttttg-gggtgg 26261691  T
Q  323 gagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaat 422  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||   || ||| ||||| | |||||||| ||| ||||||| ||||||||     
T  26261692 gagtgaggatcataggaaaatttcttggattggttggaaaactgtttgtttaagaaaagagtatggatggttgggggtaaggcagatgagggagtttaac 26261791  T
Q  423 attgctttattagaaaaatggtgatggagga---tgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    |  ||||| |||| |||  ||||||| ||||   ||||||| ||||||  || ||| | |||||||||| | |||||||| || ||||| ||||    
T  26261792 accgctttgttaggaaagcggtgatgaaggatgttgttagtggatagataagattttttgtatagggtgctagttgctcgctacggtgatgagg 26261885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 377 - 555
Target Start/End: Complemental strand, 380612 - 380434
Alignment:
Q  377 taaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggttta 476  Q
    ||||||| ||||| |||||||||| ||| || |||| |||||||||| ||  ||| |||  |||||||| ||| ||||||| || |||||||  |||||     
T  380612 taaggagtatggaggtttgggggtcaggcagttgagggagtttaatagtgtcttactaggcaaatggtgttggcggatgttggtggatagagatggtttc 380513  T
Q  477 tggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggt 555  Q
    |||||||||||| |||  || || ||||||||||||| |||||||| | ||| |||||| |||||||||||||| ||||    
T  380512 tggtatagggtgctggaagcgcggtatggtgaggaggcagggaggttggaggttgggggccggagtggttcttcttggt 380434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 513
Target Start/End: Complemental strand, 35637899 - 35637710
Alignment:
Q  323 gagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaat 422  Q
    |||||||||  |||||||||| || ||||| | |||||| | | ||||||||   |||||||||||| |||||||| | ||| |  |||| ||||| |||    
T  35637899 gagtgaggataataggaaaatatcatggatcgcttggaatactatttgtttacgaaaggagcatggaggtttgggg-tgaggcaattgagggagttaaat 35637801  T
Q  423 attgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
     |||| ||||||| ||| ||||| |||||| |||| ||||||||||||||||||||||| | ||||||||||||  | ||||| |||||||    
T  35637800 tttgcattattaggaaagtggtgttggaggttgttggttgatagaggaggtttatggtacaaggtgttggttgcgaggtatggcgaggagg 35637710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 393 - 522
Target Start/End: Original strand, 26263431 - 26263560
Alignment:
Q  393 ttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttgg 492  Q
    |||||||| ||  ||||||| |||||||||| |||||| |||| ||||||||| ||||| ||||||||  ||||   |||||| | |||||||||||| |    
T  26263431 ttgggggtaagtgagatgagggagtttaatactgctttgttaggaaaatggtgttggagaatgttagtaaataggataggtttttcgtatagggtgttag 26263530  T
Q  493 ttgctcgttatggtgaggaggtagggaggt 522  Q
    ||||||||||||||||||||| ||| ||||    
T  26263531 ttgctcgttatggtgaggaggaaggaaggt 26263560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 149 - 557
Target Start/End: Original strand, 22094449 - 22094859
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||| ||||| |||  |||||||| |||||||| || ||||||||||| |  |||||| | || ||  || || ||||||| || ||||||||||     
T  22094449 gtattaaagctagactgtcgggttggaatagtcgtttcctctcttttggtggccatttggttcttctcaaagctgtcttgacttctttgcctgtctatgc 22094548  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnnggga-gggagtgaggaacataggaaaatttc 346  Q
    ||| | |||||||||| ||| |||||||||||||||| | ||||| ||| | || |||||         |||  ||| |||||||||| |||||||| ||    
T  22094549 tctttccttcttcaaagctccgtcaggtataatctctgccattgaatctttatttaataatttttttttggggtgggggtgaggaacacaggaaaatatc 22094648  T
Q  347 ttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtga 446  Q
    |||||| || |||     ||||||| |    ||||||  |||| | || ||||||||  || |||  |||||||||||||||||| |||  || |||||     
T  22094649 ttggataggctggtcttctgtttgtctccaaaaggagtttggagggttaggggttagacagttgaaggagtttaatattgctttactagggaagtggtgt 22094748  T
Q  447 tggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggtt 546  Q
    |||||||||||||| ||||| || ||||| |||||||| || || || ||||||||||| ||||     ||||||| | |||||||||| || ||| |||    
T  22094749 tggaggatgttagtggataggggtggtttttggtatagagttttagtcgctcgttatggcgaggtttgtgggaggttggaggatgggggccgaagttgtt 22094848  T
Q  547 cttcatggtgg 557  Q
    |||| ||||||    
T  22094849 cttcgtggtgg 22094859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 30731514 - 30731658
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||||| ||||| || || ||||| |||||||| ||| || | || |||||  |||||||| |  ||||||||||||     
T  30731514 gtattaaatctagattgtctggttggaaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctctacctgtctatgc 30731613  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | |||||||||| ||| | |||||||||||||||| |||||    
T  30731614 actttccttcttcaaagctccgacaggtataatctcttccattga 30731658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 42514660 - 42514516
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||| | ||||| || || ||||| |||||||| ||| || | || |||||| |||||||| |  ||||||||||||     
T  42514660 gtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactgctctacctgtctatgc 42514561  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | |||||||||| ||| | |||||||||||||||| |||||    
T  42514560 actttccttcttcaaagctccgacaggtataatctcttccattga 42514516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 438 - 549
Target Start/End: Complemental strand, 19838267 - 19838156
Alignment:
Q  438 aaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtc 537  Q
    ||||||||  ||||||||||||| |||| ||||||||| ||||||| ||||||| | |||||||||| |||||| | |||||||| || || | |||| |    
T  19838267 aaatggtgcaggaggatgttagtagataaaggaggtttgtggtataaggtgttgttagctcgttatgatgaggatgcagggaggttgatggttaggggac 19838168  T
Q  538 ggagtggttctt 549  Q
     |||||||||||    
T  19838167 agagtggttctt 19838156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 409 - 522
Target Start/End: Complemental strand, 23923564 - 23923452
Alignment:
Q  409 tgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtga 508  Q
    |||| ||||||||| |  |||| ||||  |||||||||||||||||||||||||| ||||| || || ||||||| |||||||| |||| | ||||||||    
T  23923564 tgagggagtttaatttatcttttttagggaaatggtgatggaggatgttagttgacagaggtgggttttggtata-ggtgttggctgctaggtatggtga 23923466  T
Q  509 ggaggtagggaggt 522  Q
    ||||| || |||||    
T  23923465 ggaggcagagaggt 23923452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 321 - 493
Target Start/End: Complemental strand, 22437983 - 22437811
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    ||||||||||| |||||||||| ||| |||||| |||||||   ||||||||    ||||||| |  || |||| ||||| |||  ||||| ||| | ||    
T  22437983 gggagtgaggatcataggaaaacttcatggattagttggaattttgtttgttatcgtaaggaggaatgaggtttaggggtgaggaggatgatagaatata 22437884  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggt 493  Q
    |||| ||| | ||||  |||||| | |||||||||||||| |||||||  ||||| |||||||||||||||||    
T  22437883 atatagctcttttaggtaaatggggctggaggatgttagtagatagagatggtttgtggtatagggtgttggt 22437811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 468
Target Start/End: Complemental strand, 38358169 - 38358087
Alignment:
Q  386 tggaagtttgggggttaggtagat-gagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagag 468  Q
    |||| |||||||||||||| |||| ||  |||||||||||||||||| |||  |||||||| ||||||||||||||||||||||    
T  38358169 tggaggtttgggggttagg-agattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagttgatagag 38358087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 408 - 522
Target Start/End: Complemental strand, 476893 - 476779
Alignment:
Q  408 atgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtg 507  Q
    ||||| |||||||||| |||||| ||||  |||||||| ||| | ||||| || |||||||  ||||| |||||||||||| |||| ||  | |||||||    
T  476893 atgagggagtttaatagtgctttgttaggtaaatggtgttggcgaatgttggtagatagagatggtttttggtatagggtgctggtagcgagatatggtg 476794  T
Q  508 aggaggtagggaggt 522  Q
    |||||| ||||||||    
T  476793 aggaggcagggaggt 476779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 487
Target Start/End: Complemental strand, 31864884 - 31864835
Alignment:
Q  438 aaatggtgatggaggatgttagttgatagaggaggtttatggtatagggt 487  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  31864884 aaatggtgttggaggatgttagtggatagaggaggcttatggtatagggt 31864835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 28534876 - 28535020
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    ||||||||  ||||||||  |||||| | ||||| || || |||||||||||||| ||| || | ||||||||  |||||||| |  ||||||||||||     
T  28534876 gtattaaaaatagattgtcaggttggcaaagtcggttcctttcttttggtggtcgtttgattcttcttaagtccgtcctgactgctctacctgtctatgc 28534975  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | ||| |||||| ||| |||||||||||||||||| |||||    
T  28534976 actttcctttttcaaagctccgtcaggtataatctcttccattga 28535020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 148 - 286
Target Start/End: Original strand, 4297508 - 4297647
Alignment:
Q  148 agtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatg 247  Q
    ||||||||||| ||||||| || ||  || ||||| ||| | || |||||||| || || ||| |||| ||||||||| |||| ||  ||||||||||||    
T  4297508 agtattaaatcgagattgtctgatttcaatagtcggtttttatcgtttggtggccggttagttctcctaaagtctatcttgacctctctacctgtctatg 4297607  T
Q  248 ttctctacttcttcaa-actctgtcaggtataatctcttc 286  Q
     ||| | ||||||||| |||| |||||||||||| |||||    
T  4297608 ctctttccttcttcaagactccgtcaggtataatttcttc 4297647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 412 - 491
Target Start/End: Original strand, 8299646 - 8299725
Alignment:
Q  412 gagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttg 491  Q
    |||||||||| |||||||| || |  |||||||| |||||| ||||||||||||| |||||||| |||  ||||||||||    
T  8299646 gagagtttaacattgctttgttggggaaatggtgttggaggctgttagttgataggggaggtttgtggagtagggtgttg 8299725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 19838462 - 19838360
Alignment:
Q  192 ttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttctctacttcttcaaa--ctctgtcaggtataatctcttctat 289  Q
    |||| ||||||| ||| || | || |||||| |||||||||| || |||||||||||||| | ||||||||||  ||||| |||||| |||||||||| |    
T  19838462 tttttgtggtcgtttgattcttctcaagtctgtcctgacttctttgcctgtctatgttctttccttcttcaaaagctctgacaggtacaatctcttctgt 19838363  T
Q  290 tga 292  Q
    |||    
T  19838362 tga 19838360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 22737019 - 22737074
Alignment:
Q  29 tggtttcttgatcttctactattttgaatggttgattttgaatgagcaaaattgaa 84  Q
    |||||||||||||||||||  | |||||||||||||||||||||| ||| ||||||    
T  22737019 tggtttcttgatcttctaccgtcttgaatggttgattttgaatgatcaagattgaa 22737074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 491
Target Start/End: Complemental strand, 10780880 - 10780798
Alignment:
Q  409 tgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttg 491  Q
    ||||||||||||| |||||||| || |  |||||||| ||| || ||||||||||||| |||||||| |||  ||||||||||    
T  10780880 tgagagagtttaacattgctttgttggggaaatggtgttggcggctgttagttgataggggaggtttgtggagtagggtgttg 10780798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 438 - 484
Target Start/End: Complemental strand, 31864439 - 31864393
Alignment:
Q  438 aaatggtgatggaggatgttagttgatagaggaggtttatggtatag 484  Q
    |||||||| |||||||||||||| ||||||||||| |||||||||||    
T  31864439 aaatggtgttggaggatgttagtggatagaggaggcttatggtatag 31864393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 487
Target Start/End: Complemental strand, 34481715 - 34481549
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    |||||||||||  | ||||||||||||||| |  ||||| ||| ||||||||||   |||||| ||||  |||||||||| ||| |  |||  |||||||    
T  34481715 gggagtgaggataacaggaaaatttcttggttaagttggcaaactgtttgtttaaaaaaggagtatggtggtttgggggtgaggaaagtgaaggagttta 34481616  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggt 487  Q
    | || ||||| ||||  |||||||| ||| ||||||| || || ||||| || || |||||||||||    
T  34481615 acatagctttgttagggaaatggtgttggcggatgttggtagacagaggtgggttgtggtatagggt 34481549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 432 - 496
Target Start/End: Complemental strand, 588163 - 588099
Alignment:
Q  432 ttagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgc 496  Q
    |||| ||| ||||| ||||||||| | ||||||||| | |||||||||||||||||||| |||||    
T  588163 ttaggaaagtggtgttggaggatgctggttgatagatgtggtttatggtatagggtgttagttgc 588099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 292
Target Start/End: Complemental strand, 23239319 - 23239179
Alignment:
Q  153 taaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttctc 252  Q
    |||||||||||||| ||||||| | ||||| || || ||||| |||||||| | | || | || |||||  |||||||| |  ||||||||||||  ||     
T  23239319 taaatctagattgtctggttggcaaagtcggttcctttctttcggtggtcgttcgattcttctaaagtccgtcctgactgctctacctgtctatgcactt 23239220  T
Q  253 tacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
    | ||| |||||| ||| |||||||||||||||||| |||||    
T  23239219 tcctttttcaaagctccgtcaggtataatctcttccattga 23239179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 541
Target Start/End: Original strand, 29572241 - 29572465
Alignment:
Q  317 gggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagag 416  Q
    ||||||||||||||| ||||| ||||||  |||||||  |||||| |   ||||| |    ||||||  |||| || |||||||||||||  | || |||    
T  29572241 gggagggagtgaggatcatagaaaaattctttggattaattggaataccatttgtctcaacaaggagtctggaggtctgggggttaggtaactaagggag 29572340  T
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtag 516  Q
    |||||| |  || | ||||  ||||| || |||| |||||||||||| ||| | || || ||||| |||||||||| |||| | ||||||||||||| ||    
T  29572341 tttaatttatctcttttagggaaatgatgttggaagatgttagttgacagatgtgggttttggtaaagggtgttggctgctaggtatggtgaggaggcag 29572440  T
Q  517 ggaggtcgaaggatgggggtcggag 541  Q
     ||||| | ||| |||||| |||||    
T  29572441 agaggttggaggttgggggccggag 29572465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 541
Target Start/End: Original strand, 29573618 - 29573842
Alignment:
Q  317 gggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagag 416  Q
    ||||||||||||||| ||||| ||||||  |||||||  |||||| |   ||||| |    ||||||  |||| || |||||||||||||  | || |||    
T  29573618 gggagggagtgaggatcatagaaaaattctttggattaattggaataccatttgtctcaacaaggagtctggaggtctgggggttaggtaactaagggag 29573717  T
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtag 516  Q
    |||||| |  || | ||||  ||||| || |||| |||||||||||| ||| | || || ||||| |||||||||| |||| | ||||||||||||| ||    
T  29573718 tttaatttatctcttttagggaaatgatgttggaagatgttagttgacagatgtgggttttggtaaagggtgttggctgctaggtatggtgaggaggcag 29573817  T
Q  517 ggaggtcgaaggatgggggtcggag 541  Q
     ||||| | ||| |||||| |||||    
T  29573818 agaggttggaggttgggggccggag 29573842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 541
Target Start/End: Original strand, 29574995 - 29575219
Alignment:
Q  317 gggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagag 416  Q
    ||||||||||||||| ||||| ||||||  |||||||  |||||| |   ||||| |    ||||||  |||| || |||||||||||||  | || |||    
T  29574995 gggagggagtgaggatcatagaaaaattctttggattaattggaataccatttgtctcaacaaggagtctggaggtctgggggttaggtaactaagggag 29575094  T
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtag 516  Q
    |||||| |  || | ||||  ||||| || |||| |||||||||||| ||| | || || ||||| |||||||||| |||| | ||||||||||||| ||    
T  29575095 tttaatttatctcttttagggaaatgatgttggaagatgttagttgacagatgtgggttttggtaaagggtgttggctgctaggtatggtgaggaggcag 29575194  T
Q  517 ggaggtcgaaggatgggggtcggag 541  Q
     ||||| | ||| |||||| |||||    
T  29575195 agaggttggaggttgggggccggag 29575219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 541
Target Start/End: Original strand, 29576372 - 29576596
Alignment:
Q  317 gggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagag 416  Q
    ||||||||||||||| ||||| ||||||  |||||||  |||||| |   ||||| |    ||||||  |||| || |||||||||||||  | || |||    
T  29576372 gggagggagtgaggatcatagaaaaattctttggattaattggaataccatttgtctcaacaaggagtctggaggtctgggggttaggtaactaagggag 29576471  T
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtag 516  Q
    |||||| |  || | ||||  ||||| || |||| |||||||||||| ||| | || || ||||| |||||||||| |||| | ||||||||||||| ||    
T  29576472 tttaatttatctcttttagggaaatgatgttggaagatgttagttgacagatgtgggttttggtaaagggtgttggctgctaggtatggtgaggaggcag 29576571  T
Q  517 ggaggtcgaaggatgggggtcggag 541  Q
     ||||| | ||| |||||| |||||    
T  29576572 agaggttggaggttgggggccggag 29576596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 541
Target Start/End: Original strand, 29577749 - 29577973
Alignment:
Q  317 gggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagag 416  Q
    ||||||||||||||| ||||| ||||||  |||||||  |||||| |   ||||| |    ||||||  |||| || |||||||||||||  | || |||    
T  29577749 gggagggagtgaggatcatagaaaaattctttggattaattggaataccatttgtctcaacaaggagtctggaggtctgggggttaggtaactaagggag 29577848  T
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtag 516  Q
    |||||| |  || | ||||  ||||| || |||| |||||||||||| ||| | || || ||||| |||||||||| |||| | ||||||||||||| ||    
T  29577849 tttaatttatctcttttagggaaatgatgttggaagatgttagttgacagatgtgggttttggtaaagggtgttggctgctaggtatggtgaggaggcag 29577948  T
Q  517 ggaggtcgaaggatgggggtcggag 541  Q
     ||||| | ||| |||||| |||||    
T  29577949 agaggttggaggttgggggccggag 29577973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 541
Target Start/End: Original strand, 29579126 - 29579350
Alignment:
Q  317 gggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagag 416  Q
    ||||||||||||||| ||||| ||||||  |||||||  |||||| |   ||||| |    ||||||  |||| || |||||||||||||  | || |||    
T  29579126 gggagggagtgaggatcatagaaaaattctttggattaattggaataccatttgtctcaacaaggagtctggaggtctgggggttaggtaactaagggag 29579225  T
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtag 516  Q
    |||||| |  || | ||||  ||||| || |||| |||||||||||| ||| | || || ||||| |||||||||| |||| | ||||||||||||| ||    
T  29579226 tttaatttatctcttttagggaaatgatgttggaagatgttagttgacagatgtgggttttggtaaagggtgttggctgctaggtatggtgaggaggcag 29579325  T
Q  517 ggaggtcgaaggatgggggtcggag 541  Q
     ||||| | ||| |||||| |||||    
T  29579326 agaggttggaggttgggggccggag 29579350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 33870906 - 33870854
Alignment:
Q  29 tggtttcttgatcttctactattttgaatggttgattttgaatgagcaaaatt 81  Q
    |||||||||||||||||||| | || |||| |||||||||||||| |||||||    
T  33870906 tggtttcttgatcttctactttcttaaatgattgattttgaatgatcaaaatt 33870854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 557
Target Start/End: Complemental strand, 41590711 - 41590627
Alignment:
Q  473 tttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    ||||||||||||||||||||| ||  | |||||||||||||  ||||||| |  || |||||| ||||| |||||||| ||||||    
T  41590711 tttatggtatagggtgttggtggcgaggtatggtgaggaggatgggaggttggcggttgggggccggagaggttcttcttggtgg 41590627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 491
Target Start/End: Original strand, 25856903 - 25856982
Alignment:
Q  412 gagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttg 491  Q
    |||||||||| |||||||| || |  |||||||| | |||| ||||||||||||| |||||||| |||  ||||||||||    
T  25856903 gagagtttaacattgctttgttggggaaatggtgttagaggctgttagttgataggggaggtttgtggagtagggtgttg 25856982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 26262655 - 26262714
Alignment:
Q  159 tagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaa 218  Q
    |||||||| || |||||||||||||||||| |||||||||| ||| ||| || |||||||    
T  26262655 tagattgtctgtttggaagagtcgttttctttcttttggtgatcgcttgattctccttaa 26262714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 460
Target Start/End: Complemental strand, 33170337 - 33170286
Alignment:
Q  409 tgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagt 460  Q
    |||| ||||||||||||||||| |||| ||||||||| |||||| |||||||    
T  33170337 tgagggagtttaatattgctttgttaggaaaatggtgttggaggttgttagt 33170286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 292
Target Start/End: Original strand, 35983036 - 35983135
Alignment:
Q  194 ttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
    |||||||||| ||| || | ||||||||| |||||||| |  ||||||||||||  || | ||| |||||| |||||||||||||||||| ||| |||||    
T  35983036 ttggtggtcgtttgattcttcttaagtctgtcctgactgctctacctgtctatgcactttcctttttcaaagctctgtcaggtataatcttttccattga 35983135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 4297833 - 4297918
Alignment:
Q  472 gtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    |||||||||||||||||||||| ||  | |||||||||||||  ||||||| |  || |||||  ||||| |||||||| ||||||    
T  4297833 gtttatggtatagggtgttggtggcgaggtatggtgaggaggatgggaggttggcggttggggcccggagaggttcttcttggtgg 4297918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 35122151 - 35122240
Alignment:
Q  393 ttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtat 482  Q
    ||||||||||||  | ||||  |||||||| |||| ||| |||  |||||||| |||||||||||||| ||||||| ||| || ||||||    
T  35122151 ttgggggttaggaggttgaggaagtttaatgttgcattactagggaaatggtgttggaggatgttagtggatagagaaggattgtggtat 35122240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 557
Target Start/End: Complemental strand, 42928810 - 42928662
Alignment:
Q  409 tgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtga 508  Q
    |||||||||||||||||||||| || | ||| ||||| ||| |  ||||| | ||||| | || |||||||| |||||||||||| ||| | |||| ||     
T  42928810 tgagagagtttaatattgctttgttgggaaagtggtgttggcgattgttaatagatagggaagctttatggtgtagggtgttggtggctaggtatgatgt 42928711  T
Q  509 ggaggtagggagg-tcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    || || | ||||| | | |||||||||| |||||| ||||||| ||||||    
T  42928710 ggcgg-atggaggtttggaggatgggggccggagttgttcttcgtggtgg 42928662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 507
Target Start/End: Complemental strand, 27796157 - 27796065
Alignment:
Q  415 agtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtg 507  Q
    ||||||| ||||||||  |||  |||||||| ||| || |||||||||||||||  || ||||||  |||||||||||| ||| | |||||||    
T  27796157 agtttaacattgctttgctagggaaatggtgttggcggttgttagttgatagagaggggttatggcgtagggtgttggtggctaggtatggtg 27796065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 7e-29; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 378 - 527
Target Start/End: Original strand, 27393379 - 27393528
Alignment:
Q  378 aaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttat 477  Q
    ||||||||| |  |||||||||| ||| || || | ||||||||| |||| || |||| ||| ||||| |||||| |||| |||||||||||||||||||    
T  27393379 aaggagcattgtggtttgggggtgaggaagttgcgggagtttaatcttgcattgttaggaaagtggtgttggaggttgttggttgatagaggaggtttat 27393478  T
Q  478 ggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaag 527  Q
    |||||| ||||||||||||| | ||||||||||||| |||||||| ||||    
T  27393479 ggtatatggtgttggttgctaggtatggtgaggaggcagggaggttgaag 27393528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 149 - 487
Target Start/End: Original strand, 32352512 - 32352849
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||| |||  |||||||| ||||| ||||| |||||||||||||| |||||| | || || ||| || |||| ||  | ||||||||||     
T  32352512 gtattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacctctctgcctgtctatgc 32352611  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttct 347  Q
     || | |||||||||| |||   ||||||||||||| |||||||| ||| | || | ||          ||| |||||||||||  ||||||||||||||    
T  32352612 actttccttcttcaaagctccagcaggtataatctcctctattgattctttgtttatta--ttttttttgggggggagtgaggataataggaaaatttct 32352709  T
Q  348 tggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgat 447  Q
    ||| |  ||||| ||| ||||||||||   |||||| ||||  |||||||||| ||| |  |||  ||||||||| | ||||| |||| ||||||||| |    
T  32352710 tggttaagttggcaaactgtttgtttaaaaaaggagtatggcggtttgggggtgaggaaattgaaggagtttaatttagctttgttaggaaaatggtgtt 32352809  T
Q  448 ggaggatgttagttgatagaggaggtttatggtatagggt 487  Q
    || ||||||| || |||||||| ||||| |||||||||||    
T  32352810 ggcggatgttggtggatagaggtggtttgtggtatagggt 32352849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 394 - 514
Target Start/End: Complemental strand, 20987849 - 20987729
Alignment:
Q  394 tgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggt 493  Q
    ||||||||||| || |||| || ||||||| ||| || ||||  |||||||| ||||||||||| || ||||||| ||| |||||| |||||||||||||    
T  20987849 tgggggttaggcagttgagggaatttaatactgcgttgttagggaaatggtgctggaggatgttggtggatagagaagggttatggcatagggtgttggt 20987750  T
Q  494 tgctcgttatggtgaggaggt 514  Q
     ||||| ||||||||||||||    
T  20987749 ggctcggtatggtgaggaggt 20987729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 393 - 513
Target Start/End: Original strand, 33142658 - 33142778
Alignment:
Q  393 ttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttgg 492  Q
    |||||||| |||  ||||||||| |||||| | ||| | ||||  |||||||| |||||| ||||||||||||||| ||| || ||||||||||||||||    
T  33142658 ttgggggtgaggaggatgagagaatttaatttggctctcttaggtaaatggtgttggaggttgttagttgatagagaaggcttgtggtatagggtgttgg 33142757  T
Q  493 ttgctcgttatggtgaggagg 513  Q
    | || ||||| ||||||||||    
T  33142758 tggcccgttacggtgaggagg 33142778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 557
Target Start/End: Complemental strand, 52692134 - 52692002
Alignment:
Q  425 tgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcg 524  Q
    ||||||||||| ||||||||| ||||||||||| || |||||||  || || ||||||||||||||||| || || |||||||||||||  ||||||| |    
T  52692134 tgctttattaggaaaatggtgttggaggatgttggtggatagagaggggttctggtatagggtgttggtggcgcggtatggtgaggaggctgggaggttg 52692035  T
Q  525 aaggatgggggtcggagtggttcttcatggtgg 557  Q
      ||  | ||||||||||| |||||| ||||||    
T  52692034 gtggtagagggtcggagtgattcttcttggtgg 52692002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 5498026 - 5497882
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||| |||  |||||||| ||||| ||||| |||||||||||||| |||||| | || || ||| ||||||| || || ||||||||||     
T  5498026 gtattaaatctagactgtcgggttggaatagtcggtttctatcttttggtggtcgcttggttcttctcaaatctgtcctgacctctttgcctgtctatgc 5497927  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
      | | |||||||||| |||  |||||||||||||| ||||||||    
T  5497926 aatttccttcttcaaagctccatcaggtataatctcctctattga 5497882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 6051543 - 6051399
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||| | ||||| || || ||||| |||||||| ||| || | || |||||| |||||||| |  ||||||||||||     
T  6051543 gtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactgctctacctgtctatgc 6051444  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | |||||||||| ||| | |||||||||||||||| |||||    
T  6051443 actttccttcttcaaagctccgacaggtataatctcttccattga 6051399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 317 - 557
Target Start/End: Complemental strand, 38070602 - 38070363
Alignment:
Q  317 gggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagag 416  Q
    |||||||||||||||  | ||||||||||| ||||| | |||||  | ||||||||||  ||||||  ||||  |||||||| | ||  || |||  ||     
T  38070602 gggagggagtgaggataacaggaaaatttcatggatcgcttggagcactgtttgtttacgtaaggaagatgggggtttgggg-tgagacagttgaatgaa 38070504  T
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtag 516  Q
    |||||||||| |||||||  ||||||||| ||| || |||| || ||||||||||| || |||||||| || ||||| ||  | |||||||||||||  |    
T  38070503 tttaatattgttttattaagaaaatggtgttggcggttgttggtggatagaggagggttgtggtatagagttttggtggcaaggtatggtgaggaggctg 38070404  T
Q  517 ggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    || ||| | ||| |||||||||||||| |||| | ||||||    
T  38070403 ggcggttggaggttgggggtcggagtgtttctacttggtgg 38070363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 322 - 557
Target Start/End: Original strand, 25504368 - 25504603
Alignment:
Q  322 ggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaa 421  Q
    |||||||||| ||||||||||| |||||||| |||||||    ||||||| |    ||||||  |||| | || ||||||||  || |||  ||||||||    
T  25504368 ggagtgaggatcataggaaaatatcttggataggttggagctctgtttgtctccagaaggagtttggagggttaggggttagacagttgatggagtttaa 25504467  T
Q  422 tattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggagg 521  Q
    |||||| ||| |||  |||||||| |||||||||||||| ||||| || ||||| |||||||| || || || || |||||||| |||| |   ||||||    
T  25504468 tattgccttactagggaaatggtgttggaggatgttagtggataggggtggtttttggtatagagttttagtcgcccgttatggcgaggtgtgtgggagg 25504567  T
Q  522 tcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    | | ||| |||||| | |||| ||||||| ||||||    
T  25504568 ttggaggttgggggccagagttgttcttcttggtgg 25504603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 238 - 522
Target Start/End: Original strand, 3544390 - 3544675
Alignment:
Q  238 cctgtctatgttctctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacata 336  Q
    ||||||||||  || | |||||||||| ||| ||||||||||||||||   ||||| ||| |||| |||||         |||||||||||||||  | |    
T  3544390 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaatttttttggggagggagtgaggataaca 3544489  T
Q  337 ggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattaga 436  Q
    |||||||||| ||| | | ||||||   ||||||||||   |||||| ||||| | ||||| || || ||| |||| |||||||||  || ||| ||||     
T  3544490 ggaaaatttcctgggtcgcttggaactctgtttgtttacaaaaggagtatggagggttgggagtgagatagctgagggagtttaattgtgttttgttagg 3544589  T
Q  437 aaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggt 522  Q
     |||||||| ||| | ||||| || |||||||  ||||| |||||||||||| |||| ||  | ||||||||||||| ||||||||    
T  3544590 taaatggtgttggcgaatgttggtagatagagatggtttttggtatagggtgctggtagcgagatatggtgaggaggcagggaggt 3544675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 151 - 509
Target Start/End: Original strand, 13867042 - 13867394
Alignment:
Q  151 attaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttc 250  Q
    |||||||||||| |||| || ||  | ||||||||||| |||||||| ||||| |||||  | ||||||||| |||||||| | |||||||| |||| ||    
T  13867042 attaaatctagactgttggggtgacaaagtcgttttctctcttttggaggtcggttggtccttcttaagtctgtcctgactgcattacctgtatatgctc 13867141  T
Q  251 tctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttcttg 349  Q
    | | |||||||||  ||| ||||||||||||||||   ||||| ||| |||| ||||          |||||||||||||||  | ||||||||||| ||    
T  13867142 tttccttcttcaaggctccgtcaggtataatctctgtcattgaatctatttttaatattttttttttgggagggagtgaggataacaggaaaatttcctg 13867241  T
Q  350 gattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatgg 449  Q
    | ||| || ||     ||||| |||  || ||||       |||||||||| ||| || ||   || ||||||| |||||| ||||  |||||||| |||    
T  13867242 ggttgcttagagctcggtttgcttacgtatggag-------gtttgggggtgaggaagttgcaggaatttaatagtgctttgttaggtaaatggtgttgg 13867334  T
Q  450 aggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgag 509  Q
     ||||||| || |||||||| |||||||||||||||||  |||| ||||| |||||||||    
T  13867335 cggatgttggtggatagaggtggtttatggtatagggtcctggtagctcggtatggtgag 13867394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 407 - 557
Target Start/End: Complemental strand, 21405518 - 21405368
Alignment:
Q  407 gatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggt 506  Q
    |||||| ||||||||| || || | |||| ||||||||| |||||| | ||||||||||  ||  || | ||||||||||||||||| || |||||||||    
T  21405518 gatgagggagtttaatgtttctctgttaggaaaatggtgttggaggttattagttgataagggtagtatgtggtatagggtgttggtagcacgttatggt 21405419  T
Q  507 gaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    |||||||  ||||||| |  || |||||| | ||||| |||||| ||||||    
T  21405418 gaggaggatgggaggttggtggttgggggccagagtgtttcttcgtggtgg 21405368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 557
Target Start/End: Original strand, 22191227 - 22191391
Alignment:
Q  393 ttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttgg 492  Q
    |||||||| |||  |||||| ||||||||| || || | ||||  |||||||| |||||| | ||||||||||  ||  || | ||||||||||||||||    
T  22191227 ttgggggtgaggaggatgagggagtttaatgtttctctgttaggtaaatggtgttggaggttattagttgataagggtagtatgtggtatagggtgttgg 22191326  T
Q  493 ttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    | ||  |||||||||||||||  ||||||| |  || |||||| ||||||| |||||| ||||||    
T  22191327 tggcgtgttatggtgaggaggatgggaggttggtggttgggggccggagtgtttcttcgtggtgg 22191391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 926546 - 926487
Alignment:
Q  25 ggactggtttcttgatcttctactattttgaatggttgattttgaatgagcaaaattgaa 84  Q
    |||||||||||||||||||||| ||| |||| ||||||| ||||||||| ||||||||||    
T  926546 ggactggtttcttgatcttctaatatcttgagtggttgactttgaatgatcaaaattgaa 926487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 509
Target Start/End: Complemental strand, 45796046 - 45795854
Alignment:
Q  317 gggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagag 416  Q
    |||||||||||||||  | |||||| ||| |||| ||| |||||    ||||||||||  ||||||| ||||| | |||||||| ||| || ||   ||     
T  45796046 gggagggagtgaggataacaggaaatttttttgggttgcttggagctctgtttgtttacgtaaggagtatggagggttgggggtgaggaagttgcaggaa 45795947  T
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgag 509  Q
    ||||||| |||||| ||||  |||||||| ||| ||||||| || |||| ||| ||||||||||||| |||  |||| || || |||||||||    
T  45795946 tttaatagtgctttgttaggtaaatggtgttggcggatgttggtggataaaggtggtttatggtataaggtcctggtagcacggtatggtgag 45795854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 48072626 - 48072770
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||| |||  |||||||| ||||| ||||| |||||||||||||| |||||| | || || ||| || |||| ||  | ||||||||||     
T  48072626 gtattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacctctctgcctgtctatgc 48072725  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | |||||||||| |||   ||||||||||||| ||||||||    
T  48072726 gctttccttcttcaaagctccagcaggtataatctcctctattga 48072770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 557
Target Start/End: Complemental strand, 3074426 - 3074276
Alignment:
Q  407 gatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggt 506  Q
    |||||| ||||||||| || || | |||| ||||||||| |||||| |  |||  |||| |||  || | ||||||||||||||||| || |||||||||    
T  3074426 gatgagggagtttaatgtttctctgttaggaaaatggtgttggaggttactagacgataaaggtagtatgtggtatagggtgttggtagcgcgttatggt 3074327  T
Q  507 gaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    |||||||  ||||||| |  || |||||  ||||||| |||||| ||||||    
T  3074326 gaggaggatgggaggttggcggttggggaccggagtgtttcttcgtggtgg 3074276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 465
Target Start/End: Original strand, 7395939 - 7396239
Alignment:
Q  168 tggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttctctacttcttcaaa-ct 266  Q
    ||||||||||||||||||||| || ||||| || || |||||| |  | |||||| || |||| || ||  ||||||||| ||| | |||||||||| ||    
T  7395939 tggttggaagagtcgttttctctcctttggcggccgtttggttttgttaaagtctgtcttgacctctttgtctgtctatgatctttccttcttcaaagct 7396038  T
Q  267 ctgtcaggtataatctcttctattgagtctcttttaaataa--nnnnnnnnngggagggagtgaggaacataggaaaatttcttggattggttggaaaaa 364  Q
    |  |||||||||||||||||  |||| ||| | ||||||||           ||| ||||||||| | ||||||||||| | |||||| |||||| | ||    
T  7396039 ccatcaggtataatctcttccgttgaatctttattaaataatttttttttttgggtgggagtgagaaccataggaaaatcttttggataggttggcataa 7396138  T
Q  365 tgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgat 464  Q
    ||| ||| |   ||||||| ||||| | ||| |||||||  || |||| |||||||||  |||||| ||||  |  ||||| ||||||||||| ||||||    
T  7396139 tgtgtgtctgcataaggagtatggagggttgagggttagacagttgagggagtttaattatgcttttttaggcatgtggtgttggaggatgttggttgat 7396238  T
Q  465 a 465  Q
    |    
T  7396239 a 7396239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 438 - 543
Target Start/End: Complemental strand, 28358540 - 28358435
Alignment:
Q  438 aaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtc 537  Q
    |||||||| |||||  |||| || |||||||| || || ||||| ||||||||||| ||  | ||||||||||||| |||||||| | ||| |||||| |    
T  28358540 aaatggtgttggagattgttggtagatagaggcgggttttggtacagggtgttggtggcgagatatggtgaggaggcagggaggttggaggttgggggcc 28358441  T
Q  538 ggagtg 543  Q
    ||||||    
T  28358440 ggagtg 28358435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 381 - 482
Target Start/End: Original strand, 34853081 - 34853182
Alignment:
Q  381 gagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggt 480  Q
    ||||||||| ||||| |||| ||| || ||| |||||||||| ||| |||| |||  |||   || |||||||||||||||||||||| |||||| ||||    
T  34853081 gagcatggaggtttgagggtaaggaagctgaaagagtttaatgttgatttactaggtaaacattgttggaggatgttagttgatagagaaggtttgtggt 34853180  T
Q  481 at 482  Q
    ||    
T  34853181 at 34853182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 522
Target Start/End: Original strand, 1248052 - 1248160
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    |||||||||| |||||| ||||  |||| ||| ||| | || || || |||| ||| ||||| ||||||||| ||||||| ||  | |||||||||||||    
T  1248052 gagtttaatagtgctttgttaggtaaatagtgttggtgtatattggtggataaaggtggtttttggtataggctgttggtggcgagatatggtgaggagg 1248151  T
Q  514 tagggaggt 522  Q
    |||||||||    
T  1248152 tagggaggt 1248160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 327 - 483
Target Start/End: Complemental strand, 20796418 - 20796262
Alignment:
Q  327 gaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattg 426  Q
    ||||| ||| |||||||| ||||||| |||||||| | | | ||||   | ||||||  |||| | ||||||||||||  | |||| ||||||||| |||    
T  20796418 gaggaccatcggaaaattacttggataggttggaatactttgtgttctccaaaggagtctggaggattgggggttaggaggttgagggagtttaattttg 20796319  T
Q  427 ctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtata 483  Q
    |||| ||||  |||||||| ||||||||||| ||  |||||| ||| || |||||||    
T  20796318 ctttgttaggtaaatggtgttggaggatgttggtaaatagagtagggttgtggtata 20796262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 470 - 522
Target Start/End: Original strand, 25252182 - 25252234
Alignment:
Q  470 aggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggt 522  Q
    |||||| ||||||||||||||||| |||||||||| ||| |||| ||||||||    
T  25252182 aggtttgtggtatagggtgttggtagctcgttatgatgaagaggcagggaggt 25252234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 549
Target Start/End: Original strand, 49264167 - 49264565
Alignment:
Q  151 attaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttc 250  Q
    ||||||||||||||||| |||||||| ||||| ||||| || || |||||||| |||||  |  | ||  |  | |||||||| || |||||||||| ||    
T  49264167 attaaatctagattgttaggttggaatagtcggtttctctcgttcggtggtcgcttggtccttttgaaagcagttctgacttcgttgcctgtctatgctc 49264266  T
Q  251 tctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttcttg 349  Q
    | |  ||||| ||| |||  ||||||||||||||||| ||||| ||| | || |||||         ||| ||||||||||| | | |||||||| ||||    
T  49264267 tttctttctttaaagctccatcaggtataatctcttccattgaatctttgttgaataactttttttgggg-gggagtgaggaccgtcggaaaattacttg 49264365  T
Q  350 gattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatgg 449  Q
    ||| |||||||| | | | ||||   | ||||||  |||| | ||||||||||||  | |||| ||||||||  ||| ||| ||||  |||||||| |||    
T  49264366 gataggttggaatactttgtgttctccaaaggagtctggagggttgggggttaggaggttgagggagtttaactttgttttgttaggtaaatggtgttgg 49264465  T
Q  450 aggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttctt 549  Q
    | |||||| || ||||||| ||| || |||| ||| ||  | || || |||||||| ||||  | |||||||| | ||| |||||| |||||| ||||||    
T  49264466 aagatgttggtagatagagtagggttgtggtgtagtgttatagtcgcccgttatggcgaggttggagggaggttggaggttgggggccggagttgttctt 49264565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 447 - 513
Target Start/End: Complemental strand, 19042737 - 19042671
Alignment:
Q  447 tggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    ||||| ||||||||||||||||  || || |||||||||||||| || || ||||| ||||||||||    
T  19042737 tggagaatgttagttgatagagaggggttgtggtatagggtgttagtggcccgttacggtgaggagg 19042671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 46526733 - 46526791
Alignment:
Q  26 gactggtttcttgatcttctactattttgaatggttgattttgaatgagcaaaattgaa 84  Q
    |||| |||||||| ||||||| | | ||||||| |||||||||||||| ||||||||||    
T  46526733 gacttgtttcttgttcttctattgtcttgaatgattgattttgaatgatcaaaattgaa 46526791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 51052820 - 51052706
Alignment:
Q  150 tattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgtt 249  Q
    ||||||||||||||||| ||||||| | ||||| || || ||||| |||||||| ||| || | || |||||  |||||||| |  ||||||||||||      
T  51052820 tattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctctacctgtctatgca 51052721  T
Q  250 ctctacttcttcaaa 264  Q
    || | ||||||||||    
T  51052720 ctttccttcttcaaa 51052706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 5809456 - 5809387
Alignment:
Q  214 cttaagtctatcctgacttccttacctgtctatgttctctacttcttcaaa-ctctgtcaggtataatct 282  Q
    ||||||||| |||||||  | ||||||||||||| ||| | |||||||||| ||| ||||||||||||||    
T  5809456 cttaagtctgtcctgaccgcgttacctgtctatgctctttccttcttcaaagctccgtcaggtataatct 5809387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 303
Target Start/End: Original strand, 47622279 - 47622432
Alignment:
Q  151 attaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttc 250  Q
    |||||||||||||||| |||||||   ||||| ||||| ||||||||||||||  |  |  | || |||||| |||||||| |  | ||||||||||  |    
T  47622279 attaaatctagattgtctggttggcgtagtcggtttctctcttttggtggtcgcctaatccttctaaagtctgtcctgactgctcttcctgtctatgcac 47622378  T
Q  251 tctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaa 303  Q
    | | ||| |||||| ||| ||||| |||||||||||| ||||| ||||| ||||    
T  47622379 tttcctttttcaaagctccgtcagatataatctcttccattgaatctctgttaa 47622432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 926615 - 926647
Alignment:
Q  52 ttgaatggttgattttgaatgagcaaaattgaa 84  Q
    |||||||||||||||||||||| ||||||||||    
T  926615 ttgaatggttgattttgaatgatcaaaattgaa 926647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 35541974 - 35541830
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    ||||||||| |||||||  ||||||| | ||||| ||||| || || ||||| || ||| || | || |||||  |||||||| |  ||||||||||||     
T  35541974 gtattaaatatagattggctggttggcaaagtcggtttctttccttaggtggccgtttgattcttctaaagtccgtcctgactgctctacctgtctatgc 35541875  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | ||| |||||| ||| |||||||||||||||||| |||||    
T  35541874 actttcctttttcaaagctccgtcaggtataatctcttccattga 35541830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 5e-27; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 166 - 522
Target Start/End: Original strand, 1104164 - 1104521
Alignment:
Q  166 tttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttctctacttcttcaaa- 264  Q
    ||||| |||||||| || ||||| |||||||||||||| ||| |  | | ||||| | | ||||||||  |  ||||||||| ||| | ||||||||||     
T  1104164 tttgggtggaagagccgctttctttcttttggtggtcgcttgatcgttcctaagtttgtactgacttctctgtctgtctatgctctttccttcttcaaag 1104263  T
Q  265 ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttcttggattggttggaaaaa 364  Q
    |||  | ||||| |||||||| |||||| ||| | || |||||         |||||||||||||||  |||| ||||||| ||||||  | ||||||||    
T  1104264 ctccattaggtacaatctcttatattgaatctttattgaataattttttttggggagggagtgaggacaatagcaaaattttttggatcagctggaaaaa 1104363  T
Q  365 tgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgat 464  Q
    |||||||  ||  |||||   |||| | || ||||||||| ||||||| ||| |||| | |||||| ||||  |||||||| |||||  |||||||  ||    
T  1104364 tgtttgtccaggaaaggattctggagggtttggggttaggcagatgagggagattaacactgctttgttaggtaaatggtgttggagtttgttagtaaat 1104463  T
Q  465 agaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggt 522  Q
    ||| | ||||| |||||||||||| |||||||||||||||||||||||| || |||||    
T  1104464 agatgtggtttgtggtatagggtgatggttgctcgttatggtgaggaggcagtgaggt 1104521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 317 - 510
Target Start/End: Original strand, 15987879 - 15988072
Alignment:
Q  317 gggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagag 416  Q
    ||||||||||||| || |||||||||||||||||||||||||| | ||| | |||||   ||||||  || || |||| ||||||||| ||||||  |||    
T  15987879 gggagggagtgagaaatataggaaaatttcttggattggttggcataatatatgtttgagtaaggattattgaggtttaggggttaggaagatgatggag 15987978  T
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgagg 510  Q
    ||||| |||||||| ||||  ||||  ||||| ||||||||||| | || | | ||||||||||| | ||| ||||| ||||| ||||||||||    
T  15987979 tttaacattgctttgttaggtaaattatgatgtaggatgttagtggctaaaaggggtttatggtacaaggtattggtagctcggtatggtgagg 15988072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 317 - 548
Target Start/End: Complemental strand, 26514495 - 26514264
Alignment:
Q  317 gggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagag 416  Q
    |||||||||||||||  ||||||||||||| ||||||| |||||     || ||||||   |||||| ||||| | |||||||| ||  |||| || ||     
T  26514495 gggagggagtgaggataataggaaaatttcctggattgcttggagctcagtatgtttacgaaaggagtatggagggttgggggtgagacagataagggaa 26514396  T
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtag 516  Q
    ||||||| |||||||||||  ||  |||| ||||||||| | || |||||||  || || |||||||| |||||||| ||||| ||||||||||||| ||    
T  26514395 tttaatagtgctttattagggaataggtgttggaggatgctggtggatagagaggggttctggtatagagtgttggtggctcggtatggtgaggaggcag 26514296  T
Q  517 ggaggtcgaaggatgggggtcggagtggttct 548  Q
    |||| | | ||| |||||| ||||||||||||    
T  26514295 ggagtttggaggttgggggccggagtggttct 26514264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 321 - 557
Target Start/End: Original strand, 502905 - 503141
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    ||||||||||| ||||||||||| |||||||| |||||||    ||||||| ||   ||||||  |||| | || ||||||||  || |||  |||||||    
T  502905 gggagtgaggatcataggaaaatgtcttggataggttggagctctgtttgtctacaaaaggagtttggagggttaggggttagacagttgaaggagttta 503004  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggag 520  Q
    ||||||| ||| |||  |||||||| |||||||||||||| ||||| || ||||| || ||||| || || || || |||||||| |||| |   |||||    
T  503005 atattgccttactagggaaatggtgttggaggatgttagtggataggggtggtttttgatatagagttttagtcgcccgttatggcgaggtgtgtgggag 503104  T
Q  521 gtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    || | |||||||||| |||||| ||||||| ||||||    
T  503105 gttggaggatgggggccggagttgttcttcttggtgg 503141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 391 - 557
Target Start/End: Complemental strand, 29056216 - 29056050
Alignment:
Q  391 gtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgtt 490  Q
    |||||||||| |||  |||||| ||||||||| || || | |||||||||||||| |||||| | ||||| |||| ||   || | ||||||||||||||    
T  29056216 gtttgggggtgaggaggatgagggagtttaatgtttctctgttagaaaaatggtgttggaggttattagtcgataaagatagtatgtggtatagggtgtt 29056117  T
Q  491 ggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    ||| || ||||||||||||||||  ||||||| |  || |||||| ||||||| |||||| ||||||    
T  29056116 ggtagcacgttatggtgaggaggatgggaggttggcggttgggggccggagtgtttcttcgtggtgg 29056050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 26206273 - 26206129
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||| |||  |||||||| ||||| ||||| |||||||||||||| |||||| | || || ||| ||||||| || || ||||||||||     
T  26206273 gtattaaatctagactgtcgggttggaatagtcggtttctatcttttggtggtcgcttggttcttctcaaatctgtcctgacctctttgcctgtctatgc 26206174  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | |||||||||| |||  |||||||||||||| ||||||||    
T  26206173 actttccttcttcaaagctccatcaggtataatctcctctattga 26206129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 317 - 511
Target Start/End: Complemental strand, 15511388 - 15511195
Alignment:
Q  317 gggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagag 416  Q
    |||| |||||||| || |||||||||||||||||||||||||| | ||| | |||||  |||||||  ||||| |||| ||||||||| ||||||| |||    
T  15511388 gggacggagtgagaaatataggaaaatttcttggattggttggcataatatctgtttgactaaggattatggaggtttaggggttaggaagatgagggag 15511289  T
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgagga 511  Q
    |||||  |||||||  |||  ||||  ||||  ||||||||||| | || |   ||||||||||| | ||||||||| ||||| ||||| |||||    
T  15511288 tttaactttgcttt-gtaggtaaattatgatataggatgttagtggctaaaaagggtttatggtacaaggtgttggtagctcggtatggcgagga 15511195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 441 - 522
Target Start/End: Original strand, 10919957 - 10920038
Alignment:
Q  441 tggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggt 522  Q
    ||||| ||||||||||| ||||||||||| || || ||||||||||||||||||||| | |||||||||||||  |||||||    
T  10919957 tggtgttggaggatgttggttgatagaggggggttttggtatagggtgttggttgctaggtatggtgaggaggcggggaggt 10920038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 549
Target Start/End: Complemental strand, 13086234 - 13086078
Alignment:
Q  393 ttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttgg 492  Q
    |||||||||||| || |||  ||||||||| ||||||| ||||  |||||||| ||||||||||| || ||||||| |||||| |||||||| ||  | |    
T  13086234 ttgggggttaggaagttgaaggagtttaatgttgctttgttaggtaaatggtgttggaggatgttggtagatagagtaggtttgtggtatagtgttctag 13086135  T
Q  493 ttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttctt 549  Q
    | || |||||||| ||||  | |||||||| | ||| |||||| |||||| ||||||    
T  13086134 tcgcccgttatggcgaggttggagggaggttggaggttgggggccggagttgttctt 13086078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 378 - 467
Target Start/End: Complemental strand, 21549558 - 21549469
Alignment:
Q  378 aaggagcatggaagtttgggggttaggtagat-gagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgataga 467  Q
    |||||||||||| |||||||||| ||| |||| ||  |||||||||||||||||| |||  |||||||| |||||||||||||||||||||    
T  21549558 aaggagcatggaggtttgggggtgagg-agattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagttgataga 21549469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 319 - 557
Target Start/End: Complemental strand, 32186452 - 32186214
Alignment:
Q  319 gagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtt 418  Q
    |||||||||||||  | ||||||||||| ||||||| |||||    | ||||||||| ||||||| ||| | |  ||||||| ||| || | ||||||||    
T  32186452 gagggagtgaggataacaggaaaatttcctggattgcttggagctctatttgtttaggtaaggagtatgaagggctgggggtgaggcagtttagagagtt 32186353  T
Q  419 taatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtaggg 518  Q
    |||| | || || || || |||||||| |||  | |||| || |||||||| || || ||||||||||||||||| ||  | ||| |||||| ||  |||    
T  32186352 taatttagccttgttggataaatggtgttggcagttgttggtggatagaggtgggttttggtatagggtgttggtggcgagatatagtgaggtggctggg 32186253  T
Q  519 aggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    |||| | ||| |||||| ||||||| |||||| ||||||    
T  32186252 aggttggaggttgggggccggagtgcttcttcttggtgg 32186214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 522
Target Start/End: Complemental strand, 25350885 - 25350788
Alignment:
Q  425 tgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggt 522  Q
    ||||||||||| ||||||||  ||||||||||| || |||||||  || || ||||||||||||||||| || || |||||||||||||  |||||||    
T  25350885 tgctttattaggaaaatggttttggaggatgttggtggatagagatgggttctggtatagggtgttggtggcgcggtatggtgaggaggctgggaggt 25350788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 412 - 493
Target Start/End: Original strand, 28575925 - 28576005
Alignment:
Q  412 gagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggt 493  Q
    ||||||||||||| ||| |||||  |||||| || |||||||||||||| |||||||| || ||||||||||||||||||||    
T  28575925 gagagtttaatatggctctattaagaaaatgatgttggaggatgttagtggatagagg-ggattatggtatagggtgttggt 28576005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 510
Target Start/End: Complemental strand, 33640684 - 33640495
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    ||||||||||| ||||||||||| |||||||| ||||||||   ||||||| |    ||||||  |||| | || ||||||||  || |||  |||||||    
T  33640684 gggagtgaggatcataggaaaatgtcttggataggttggaactctgtttgtctccagaaggagtttggagggttaggggttagacagttgaaggagttta 33640585  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgagg 510  Q
    || |||| ||| |||  |||||||| |||||||||||||| ||||| || ||||| |||||||| || || || || |||||||| ||||    
T  33640584 atgttgccttactagggaaatggtgttggaggatgttagtggataggggtggtttttggtatagagttttagtcgcccgttatggcgagg 33640495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 16266829 - 16266770
Alignment:
Q  25 ggactggtttcttgatcttctactattttgaatggttgattttgaatgagcaaaattgaa 84  Q
    |||||||||||||||||||||  | | |||||||||||||||||||||| ||||||||||    
T  16266829 ggactggtttcttgatcttcttttgtcttgaatggttgattttgaatgatcaaaattgaa 16266770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 557
Target Start/End: Complemental strand, 18588983 - 18588880
Alignment:
Q  454 tgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatg 553  Q
    |||||||||||||||  || ||||||||| | |||||||| ||| | |||||||||||||  ||||||| | |||||||||||||   |||||||| |||    
T  18588983 tgttagttgatagagacgggttatggtatcgagtgttggtggctagatatggtgaggaggacgggaggttggaggatgggggtcgtgttggttctttatg 18588884  T
Q  554 gtgg 557  Q
    ||||    
T  18588883 gtgg 18588880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 238 - 522
Target Start/End: Original strand, 14843426 - 14843711
Alignment:
Q  238 cctgtctatgttctctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacata 336  Q
    ||||||||||  || | |||||||||| ||| ||||||||||||||||   ||||| ||| |||| |||||         |||||||||||||||  | |    
T  14843426 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctctgtcattgaatctatttttaataaatttttttggggagggagtgaggataaaa 14843525  T
Q  337 ggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattaga 436  Q
    |||||||||| ||| | | ||||||   ||||||||||   |||||| ||||| | ||||| || ||  || |||| |||||||||| || ||| ||||     
T  14843526 ggaaaatttcctgggtcgcttggaactctgtttgtttacaaaaggagtatggagggttgggagtgagaaagctgagggagtttaatagtgatttgttagg 14843625  T
Q  437 aaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggt 522  Q
     |||||||| ||| | ||||| || |||||||  ||||| |||||||||||| |||| ||  | ||||||||||||  ||||||||    
T  14843626 taaatggtgttggcgaatgttggtagatagagatggtttttggtatagggtgctggtagcgagatatggtgaggagacagggaggt 14843711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 325 - 557
Target Start/End: Complemental strand, 11469331 - 11469100
Alignment:
Q  325 gtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatat 424  Q
    ||||||| |||||||||||| ||| ||||||||| || | ||||||||   | ||||||  |||| || ||| ||||||| || ||| ||||||||||||    
T  11469331 gtgaggatcataggaaaattacttagattggttgaaatattgtttgttcgtcaaaggagtttggaggtctggcggttaggaagttgaaagagtttaatat 11469232  T
Q  425 tgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtga-ggaggtagggaggtc 523  Q
     || ||  |||  |||||||| ||||||||||| || |||| || ||| || |||||| | ||||| || || || |||||||| | |||| |||||||     
T  11469231 agcattgctaggtaaatggtgttggaggatgttggtagataaagaagggttgtggtatcgtgtgttagtcgcccgatatggtgacgtaggt-gggaggtt 11469133  T
Q  524 gaaggatgggggtcggagtggttcttcatggtgg 557  Q
    | |||| ||||| |||||| ||||||| ||||||    
T  11469132 ggaggaaggggg-cggagttgttcttcttggtgg 11469100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 452 - 513
Target Start/End: Complemental strand, 34180560 - 34180499
Alignment:
Q  452 gatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    |||||||||||||||||||||| | | |||||||||||||| |||| | |||||||||||||    
T  34180560 gatgttagttgatagaggaggtctttcgtatagggtgttggctgctagatatggtgaggagg 34180499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 408 - 511
Target Start/End: Original strand, 12107091 - 12107194
Alignment:
Q  408 atgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtg 507  Q
    ||||||||||||||| | ||| ||||||| |||||||| || |  |||||||| ||||||   ||||| |||||||| ||||||||  ||||||||| ||    
T  12107091 atgagagagtttaatttggctctattagagaaatggtgttgaaaaatgttagtagatagaaatggtttgtggtatagagtgttggtgactcgttatgatg 12107190  T
Q  508 agga 511  Q
    ||||    
T  12107191 agga 12107194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 412 - 491
Target Start/End: Original strand, 17577182 - 17577261
Alignment:
Q  412 gagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttg 491  Q
    |||||||||| |||||||| || |  |||||||| |||||| ||||||||||||| |||||||| |||  ||||||||||    
T  17577182 gagagtttaacattgctttgttggggaaatggtgttggaggctgttagttgataggggaggtttgtggagtagggtgttg 17577261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 491
Target Start/End: Original strand, 17605766 - 17605877
Alignment:
Q  380 ggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatgg 479  Q
    |||| ||||| | ||||| ||||||  | ||||||||||||| |||||||| || |  |||||||| ||| || ||||||||||||| |||||||| |||    
T  17605766 ggagtatggagggttgggtgttaggaggttgagagagtttaacattgctttgttggggaaatggtgttggtggctgttagttgataggggaggtttgtgg 17605865  T
Q  480 tatagggtgttg 491  Q
      ||||||||||    
T  17605866 agtagggtgttg 17605877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 557
Target Start/End: Complemental strand, 19256314 - 19256171
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggagg 513  Q
    ||||||||| |||| ||| |||  |||||||| |||||||||||||| ||||| || ||||| |||||||| || || || || |||||||| |||| |     
T  19256314 gagtttaatgttgcattactagggaaatggtgttggaggatgttagtggataggggtggtttttggtatagagttttagtcgcccgttatggcgaggtgt 19256215  T
Q  514 tagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
      ||||||| | ||| |||||| | |||| ||||||| ||||||    
T  19256214 gtgggaggttggaggttgggggccagagttgttcttcttggtgg 19256171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 482
Target Start/End: Original strand, 23065478 - 23065580
Alignment:
Q  380 ggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatgg 479  Q
    |||||||||| |||| ||||||||  || |||  ||||||||| ||| |||| |||  |||||||| | |||| ||||||||||||||| |||||| |||    
T  23065478 ggagcatggaggtttcggggttagaaagttgaaggagtttaatgttgatttactaggtaaatggtgttagaggttgttagttgatagagaaggtttgtgg 23065577  T
Q  480 tat 482  Q
    |||    
T  23065578 tat 23065580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 10362749 - 10362664
Alignment:
Q  472 gtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcatggtgg 557  Q
    |||||||||||||||| ||||| ||  | |||||||||||||  ||||||| | |||  ||||| |||||||||||||| ||||||    
T  10362749 gtttatggtatagggttttggtggcgagatatggtgaggaggatgggaggttggaggtggggggccggagtggttcttcttggtgg 10362664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 543
Target Start/End: Complemental strand, 19350570 - 19350489
Alignment:
Q  462 gatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtg 543  Q
    |||||||| || || ||||||||||||||||| ||  | ||||||||||||| |||||||| | ||| |||||| |||||||    
T  19350570 gatagaggtgggttttggtatagggtgttggtggcgagatatggtgaggaggcagggaggttggaggttgggggccggagtg 19350489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 453 - 557
Target Start/End: Original strand, 7956176 - 7956279
Alignment:
Q  453 atgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggttcttcat 552  Q
    ||||||||||||||||  ||| | |||||| | |||||||| ||| | |||||||||||||  ||||||| | ||||| | || ||||||||||||| ||    
T  7956176 atgttagttgatagagatggtctttggtatcgagtgttggtggctagatatggtgaggaggacgggaggttggaggat-gaggccggagtggttctttat 7956274  T
Q  553 ggtgg 557  Q
    |||||    
T  7956275 ggtgg 7956279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 14552073 - 14551979
Alignment:
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgt-tagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggag 512  Q
    |||||||||||| ||||||  |||||||| |||||| ||| |||| |||||||  ||||| ||||||| |||||| |||||||||||||| ||||||    
T  14552073 tttaatattgctctattaggtaaatggtgttggagg-tgtctagtggatagagagggtttgtggtataaggtgtt-gttgctcgttatggcgaggag 14551979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 280
Target Start/End: Complemental strand, 19350855 - 19350752
Alignment:
Q  178 agtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttctctacttcttcaaa-ctctgtcaggta 276  Q
    ||||||||||| ||||| || ||||| |||||| | ||||||||| | |||| |||  | ||||||||||| || | |||||||||| ||| ||||||||    
T  19350855 agtcgttttctatctttcgggggtcgtttggttcttcttaagtctgtactgagttcgcttcctgtctatgtactttccttcttcaaagctccgtcaggta 19350756  T
Q  277 taat 280  Q
    ||||    
T  19350755 taat 19350752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 321 - 487
Target Start/End: Complemental strand, 15674596 - 15674430
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    |||||||||||  ||||||||||||||||| |  | ||| ||| ||||||||||   |||||| ||||  ||||||||||  || |  |||  |||||||    
T  15674596 gggagtgaggataataggaaaatttcttggttaagctggcaaactgtttgtttaaaaaaggagtatggcggtttgggggtgcggaaattgaaggagttta 15674497  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggt 487  Q
    || | ||||| |||| ||||||||| ||| ||||||| || ||  |||  ||||| |||||||||||    
T  15674496 atttagctttgttaggaaaatggtgttggcggatgttggtggaccgagatggtttgtggtatagggt 15674430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 536
Target Start/End: Original strand, 29976522 - 29976596
Alignment:
Q  462 gatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggt 536  Q
    |||||||| || || ||||||||||||||||| ||  | ||||||||||||| |||||||| | ||| |||||||    
T  29976522 gatagaggtgggttttggtatagggtgttggtggcgagatatggtgaggaggcagggaggttggaggttgggggt 29976596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 13938656 - 13938499
Alignment:
Q  151 attaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgttc 250  Q
    |||||| ||||||||| |||| || | ||||| || || ||||||||||| |||||| |  | || || ||| |||||||| |  | ||| |||||| ||    
T  13938656 attaaagctagattgtctggtcggcatagtcggttcctttcttttggtggccgattgatccttctcaaatctgtcctgactgcacttcctatctatgctc 13938557  T
Q  251 tctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataa 307  Q
    | | ||| |||||| ||| |||||||||||||||||| ||||| ||| | ||||||||    
T  13938556 tttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgttaaataa 13938499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 487
Target Start/End: Original strand, 23346933 - 23347006
Alignment:
Q  414 gagtttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggt 487  Q
    ||||||||| | ||||| |||| ||||||||| ||| ||||| | || |||||||| ||||| |||||||||||    
T  23346933 gagtttaatttagctttgttaggaaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagggt 23347006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 2554545 - 2554401
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||  | ||||| || || ||||| |||||||| ||| || | || ||||   |||||||| |  ||||||||||||     
T  2554545 gtattaaatctagattgtctggttgacaaagtcggttcctttctttcggtggtcgtttgattctactaaagttcgtcctgactgctctacctgtctatgc 2554446  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | ||| |||||| ||| ||| |||||||||||||| |||||    
T  2554445 actttcctttttcaaagctccgtcgggtataatctcttccattga 2554401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 11060062 - 11060206
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||| ||| |||| |||| ||||||||| ||||||||| | ||||||||||| ||  ||||| |  | |||||| ||||||| |  || ||||||||||     
T  11060062 gtataaaagctaggttgtctggttggaacagtcgttttttatcttttggtggccgtctggttttgttaaagtctgtcctgacctttttgcctgtctatgc 11060161  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | ||||||||||  ||  ||||||||||||||||| |||||    
T  11060162 gctttccttcttcaaagttccatcaggtataatctcttccattga 11060206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 338 - 560
Target Start/End: Complemental strand, 67830 - 67608
Alignment:
Q  338 gaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaa 437  Q
    |||||||  ||||||||||||||| | ||||||| |  | |||||| ||||| |||||||||||||| || | |  ||||||||| | ||  |  ||| |    
T  67830 gaaaattcattggattggttggaacattgtttgtctttcaaaggaggatggaggtttgggggttaggcagttaaatgagtttaatttagcccttctagga 67731  T
Q  438 aaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtc 537  Q
     | | ||| |||||| ||||| |||| |||||||| || ||||||||||||||| || || | ||||||||||||| |||||||| | ||| ||||||      
T  67730 tagtagtgttggaggttgttaattgacagaggagggttttggtatagggtgttgatttctaggtatggtgaggaggcagggaggttggaggttgggggct 67631  T
Q  538 ggagtggttcttcatggtggtgg 560  Q
    ||||||||||||| |||||||||    
T  67630 ggagtggttcttcttggtggtgg 67608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 105043 - 105187
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||||| ||||||| | ||||| || || ||||| |||||||| ||| || | || |||||| |||||||| |  ||||||||||||     
T  105043 gtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcctgactgctctacctgtctatgc 105142  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattga 292  Q
     || | |||||||||| ||| | |||||||||||||||| |||||    
T  105143 actttccttcttcaaagctccgacaggtataatctcttccattga 105187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 468
Target Start/End: Complemental strand, 484 - 164
Alignment:
Q  149 gtattaaatctagattgtttggttggaagagtcgttttctgtcttttggtggtcgattggttatccttaagtctatcctgacttccttacctgtctatgt 248  Q
    |||||||||||||||| | ||||||| | ||||| || || || |||||||||||  || || | || || ||  |||| ||| |  | ||||||||||     
T  484 gtattaaatctagattttctggttggcatagtcggttcctctcctttggtggtcgcctgattcttctcaaatccgtcctaactgcgcttcctgtctatgc 385  T
Q  249 tctctacttcttcaaa-ctctgtcaggtataatctcttctattgagtctcttttaaataannnnnnnnngggagggagtgaggaacataggaaaatttct 347  Q
    ||| | ||| |||||| ||| |||| ||||||||||||| ||||| ||| | ||||||||         ||| || ||||||||| | || |||||||||    
T  384 tctttcctttttcaaagctccgtcaagtataatctcttcaattgaatctttgttaaataaatttttttgggggggtagtgaggaaaaaagaaaaatttct 285  T
Q  348 tggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgat 447  Q
    ||||||||||||||   | | |||||    | |||| ||||| | ||||| ||||||  | ||||||||||||| |||||||| ||||  |||||||| |    
T  284 tggattggttggaattctttgtgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgctttgttagggaaatggtgtt 185  T
Q  448 ggaggatgttagttgatagag 468  Q
    ||||| ||||||| |||||||    
T  184 ggaggttgttagtagatagag 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 496
Target Start/End: Original strand, 3929 - 4104
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    ||||||||||| ||||||||||||   ||||| || ||||||| | |||||| |   |||||| ||||| |||||||||| ||  || |||  |||||||    
T  3929 gggagtgaggatcataggaaaattagctggataggatggaaaactatttgttcaaaaaaggagtatggaggtttgggggtgagacagttgaaggagttta 4028  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgc 496  Q
    ||| |||| | ||||  |||||||| ||| ||||||| || |||||||  ||||| ||||||||||| || |||||    
T  4029 atagtgctctgttagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgc 4104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 432 - 511
Target Start/End: Complemental strand, 36160 - 36081
Alignment:
Q  432 ttagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgagga 511  Q
    |||| ||||||||| ||||||||| |||| ||||||   ||||| |||||||| |||||||| |||||||||||||||||    
T  36160 ttaggaaaatggtgttggaggatgatagtagatagaaatggtttgtggtatagagtgttggtggctcgttatggtgagga 36081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 496
Target Start/End: Original strand, 327508 - 327683
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    ||||||||||| ||||||||||||   ||||| || ||||||| | ||||||     |||||| ||||| |||||||||| ||  || |||  |||||||    
T  327508 gggagtgaggatcataggaaaattagctggataggatggaaaactatttgttccagaaaggagtatggaggtttgggggtgagacagttgaaggagttta 327607  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgc 496  Q
    ||| |||||| ||||  |||||||| ||| ||||||| || |||||||  ||||| ||||||||||| || |||||    
T  327608 atagtgctttgttagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgc 327683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 496
Target Start/End: Original strand, 312054 - 312229
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    ||||||||||| ||||||||||||   ||||| || ||||||| | ||||||     |||||| | ||| |||||||||| ||  || |||  |||||||    
T  312054 gggagtgaggatcataggaaaattagctggataggatggaaaactatttgttccagaaaggagtacggaggtttgggggtgagacagttgaaggagttta 312153  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgc 496  Q
    ||| |||||| ||||  |||||||| ||| ||||||| || |||||||  ||||| ||||||||||| || |||||    
T  312154 atagtgctttgttagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgc 312229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 496
Target Start/End: Original strand, 134227 - 134402
Alignment:
Q  321 gggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagagttta 420  Q
    ||||||||||| ||||||||||||   ||||| || ||||||| | ||||||     |||||| | ||| |||||||||| ||  || |||  |||||||    
T  134227 gggagtgaggatcataggaaaattagctggataggatggaaaactatttgttccagaaaggagtacggaggtttgggggtgagacagttgaaggagttta 134326  T
Q  421 atattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgc 496  Q
    ||| |||||| ||||  |||||||| ||| ||||||| || |||||||  ||||| ||||||||||| || |||||    
T  134327 atagtgctttgttagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgc 134402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 447 - 557
Target Start/End: Complemental strand, 6729 - 6619
Alignment:
Q  447 tggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggtt 546  Q
    ||||||||||| || ||  |||| ||||| ||||||||||| || || ||  | ||||||||||||| |||||||| | ||| ||||||  |||||| ||    
T  6729 tggaggatgttggtagagcgaggcggtttgtggtatagggttttagtggcgagatatggtgaggaggcagggaggttggaggttgggggctggagtgctt 6630  T
Q  547 cttcatggtgg 557  Q
    | |||||||||    
T  6629 catcatggtgg 6619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 522
Target Start/End: Original strand, 33978 - 34183
Alignment:
Q  317 gggagggagtgaggaacataggaaaatttcttggattggttggaaaaatgtttgtttagctaaggagcatggaagtttgggggttaggtagatgagagag 416  Q
    |||||||||||||||  | ||||||||||| | | | | ||||||   ||||||||||   |||||| ||||| | ||||| || ||  || |||| |||    
T  33978 gggagggagtgaggataacaggaaaatttcctaggtcgcttggaactctgtttgtttacaaaaggagtatggagggttgggagtgagacagctgagggag 34077  T
Q  417 tttaatattgctttattagaaaaatggtgatggaggatgttagttgatagaggaggtttatggtatagggtgttggttgctcgttatggtgaggaggtag 516  Q
    ||||||| |||||| ||||  ||| |||| ||| | ||||| || || ||||  ||||| |||||||||||| |||| ||  | ||||||||||||  ||    
T  34078 tttaatagtgctttgttaggtaaaaggtgttggcgaatgttggtagagagagatggtttttggtatagggtgctggtagcgagatatggtgaggagacag 34177  T
Q  517 ggaggt 522  Q
    ||||||    
T  34178 ggaggt 34183  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 546
Target Start/End: Original strand, 86730 - 86799
Alignment:
Q  477 tggtatagggtgttggttgctcgttatggtgaggaggtagggaggtcgaaggatgggggtcggagtggtt 546  Q
    |||||| | |||||||||||| | ||||||||||||   ||||||| | |||||||||||| ||||||||    
T  86730 tggtatcgagtgttggttgctagatatggtgaggagtgtgggaggttggaggatgggggtcagagtggtt 86799  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 3024 - 3096
Alignment:
Q  393 ttgggggttaggtagatgagagagtttaatattgctttattagaaaaatggtgatggaggatgttagttgata 465  Q
    |||||||||||| || ||||||  |||||| || |||||||||  |||||||| ||||||||| | |||||||    
T  3024 ttgggggttaggcagttgagagcttttaatttttctttattaggtaaatggtgttggaggatggtggttgata 3096  T

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