View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20111_high_3 (Length: 330)

Name: NF20111_high_3
Description: NF20111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20111_high_3
NF20111_high_3
[»] chr4 (24 HSPs)
chr4 (2-305)||(2365474-2365777)
chr4 (73-231)||(9777909-9778067)
chr4 (65-298)||(55725082-55725315)
chr4 (65-208)||(8935605-8935748)
chr4 (73-301)||(48805517-48805745)
chr4 (135-298)||(3129365-3129528)
chr4 (73-205)||(2072079-2072211)
chr4 (109-160)||(4551330-4551381)
chr4 (135-301)||(23872849-23873015)
chr4 (117-208)||(19115019-19115110)
chr4 (112-262)||(55464285-55464435)
chr4 (138-229)||(42952950-42953041)
chr4 (141-241)||(53810448-53810548)
chr4 (65-208)||(23657828-23657971)
chr4 (73-176)||(29553238-29553341)
chr4 (74-244)||(7099022-7099192)
chr4 (135-301)||(20675623-20675789)
chr4 (154-208)||(26694548-26694602)
chr4 (65-213)||(54482620-54482768)
chr4 (74-184)||(9690962-9691072)
chr4 (138-208)||(19648306-19648376)
chr4 (74-184)||(54685150-54685260)
chr4 (261-301)||(19648422-19648462)
chr4 (108-156)||(38445613-38445661)
[»] chr2 (19 HSPs)
chr2 (62-273)||(20004486-20004698)
chr2 (78-303)||(32191609-32191825)
chr2 (140-242)||(36804725-36804827)
chr2 (140-283)||(35488443-35488586)
chr2 (138-301)||(11233863-11234026)
chr2 (129-298)||(12646116-12646285)
chr2 (166-229)||(9409673-9409736)
chr2 (140-244)||(8065691-8065795)
chr2 (126-301)||(13550709-13550884)
chr2 (126-301)||(13551162-13551337)
chr2 (117-208)||(28400016-28400107)
chr2 (65-150)||(43310790-43310875)
chr2 (73-229)||(9668451-9668607)
chr2 (117-208)||(15018260-15018351)
chr2 (110-189)||(28598519-28598598)
chr2 (139-205)||(22724908-22724974)
chr2 (62-140)||(37445621-37445699)
chr2 (65-150)||(26146746-26146831)
chr2 (170-303)||(33583798-33583931)
[»] chr3 (32 HSPs)
chr3 (65-302)||(5342584-5342821)
chr3 (155-260)||(38774893-38774998)
chr3 (140-244)||(15481188-15481292)
chr3 (140-244)||(24926118-24926222)
chr3 (73-185)||(25024333-25024445)
chr3 (140-244)||(36709516-36709620)
chr3 (113-305)||(40513093-40513285)
chr3 (65-229)||(44888435-44888599)
chr3 (100-208)||(53941869-53941977)
chr3 (79-305)||(55367155-55367380)
chr3 (108-213)||(9510326-9510431)
chr3 (108-213)||(9518301-9518406)
chr3 (65-150)||(52250648-52250733)
chr3 (72-208)||(6825360-6825496)
chr3 (140-301)||(21739896-21740057)
chr3 (131-301)||(22734096-22734266)
chr3 (135-305)||(34829994-34830164)
chr3 (65-285)||(14863854-14864074)
chr3 (140-244)||(42674869-42674973)
chr3 (6-41)||(38774266-38774301)
chr3 (117-208)||(45684759-45684850)
chr3 (131-213)||(12341716-12341798)
chr3 (115-213)||(48569500-48569598)
chr3 (73-190)||(35537307-35537424)
chr3 (65-213)||(962624-962772)
chr3 (117-213)||(10868186-10868282)
chr3 (109-181)||(52907708-52907780)
chr3 (63-150)||(48930255-48930342)
chr3 (79-160)||(19875788-19875869)
chr3 (100-197)||(31675497-31675594)
chr3 (100-197)||(31920828-31920925)
chr3 (129-181)||(18381653-18381705)
[»] chr7 (32 HSPs)
chr7 (73-305)||(20918499-20918730)
chr7 (103-283)||(23811557-23811737)
chr7 (73-255)||(19544821-19545003)
chr7 (100-190)||(23054455-23054545)
chr7 (65-241)||(18671701-18671877)
chr7 (109-185)||(4344393-4344469)
chr7 (65-229)||(17056060-17056224)
chr7 (100-184)||(20349529-20349613)
chr7 (73-213)||(34104016-34104156)
chr7 (75-237)||(11341337-11341500)
chr7 (74-229)||(13553629-13553784)
chr7 (140-236)||(18768014-18768110)
chr7 (112-301)||(45993153-45993342)
chr7 (141-229)||(5327370-5327458)
chr7 (65-148)||(25018844-25018927)
chr7 (140-242)||(34457590-34457692)
chr7 (141-244)||(36227580-36227683)
chr7 (141-208)||(41340140-41340207)
chr7 (109-175)||(29916671-29916737)
chr7 (130-208)||(33821025-33821103)
chr7 (100-197)||(39658864-39658962)
chr7 (100-181)||(12308615-12308696)
chr7 (130-215)||(32815774-32815859)
chr7 (74-166)||(6335912-6336004)
chr7 (73-169)||(17504064-17504160)
chr7 (73-169)||(17549054-17549150)
chr7 (262-301)||(6335777-6335816)
chr7 (79-205)||(27218591-27218717)
chr7 (138-207)||(19735122-19735191)
chr7 (124-213)||(32482470-32482559)
chr7 (100-184)||(8752886-8752970)
chr7 (109-145)||(22819246-22819282)
[»] chr8 (28 HSPs)
chr8 (153-305)||(26774616-26774768)
chr8 (104-305)||(18187716-18187916)
chr8 (109-298)||(8902402-8902591)
chr8 (93-298)||(16048292-16048498)
chr8 (109-305)||(36025096-36025292)
chr8 (140-244)||(23942693-23942797)
chr8 (65-297)||(28992606-28992838)
chr8 (109-305)||(12341142-12341338)
chr8 (100-228)||(15439683-15439811)
chr8 (100-228)||(15530987-15531115)
chr8 (73-197)||(25193627-25193751)
chr8 (65-205)||(37165590-37165730)
chr8 (131-242)||(20824896-20825007)
chr8 (131-301)||(5585286-5585456)
chr8 (138-229)||(24794350-24794441)
chr8 (65-208)||(36492912-36493055)
chr8 (112-298)||(4987441-4987627)
chr8 (115-205)||(27288657-27288747)
chr8 (110-208)||(29721376-29721474)
chr8 (132-213)||(17700078-17700159)
chr8 (138-226)||(43249252-43249340)
chr8 (102-196)||(4992175-4992269)
chr8 (138-229)||(11393793-11393884)
chr8 (65-136)||(42649750-42649821)
chr8 (140-199)||(44082487-44082546)
chr8 (156-242)||(37434391-37434477)
chr8 (115-207)||(13878954-13879046)
chr8 (129-213)||(25090982-25091066)
[»] chr5 (31 HSPs)
chr5 (100-299)||(26262251-26262450)
chr5 (109-289)||(26262816-26262996)
chr5 (67-245)||(380434-380612)
chr5 (109-301)||(26261690-26261885)
chr5 (109-299)||(35637710-35637899)
chr5 (100-229)||(26263431-26263560)
chr5 (73-184)||(19838156-19838267)
chr5 (65-208)||(22094716-22094859)
chr5 (100-213)||(23923452-23923564)
chr5 (129-301)||(22437811-22437983)
chr5 (154-236)||(38358087-38358169)
chr5 (100-214)||(476779-476893)
chr5 (135-184)||(31864835-31864884)
chr5 (131-210)||(8299646-8299725)
chr5 (131-213)||(10780798-10780880)
chr5 (138-184)||(31864393-31864439)
chr5 (135-301)||(34481549-34481715)
chr5 (126-190)||(588099-588163)
chr5 (81-305)||(29572241-29572465)
chr5 (81-305)||(29573618-29573842)
chr5 (81-305)||(29574995-29575219)
chr5 (81-305)||(29576372-29576596)
chr5 (81-305)||(29577749-29577973)
chr5 (81-305)||(29579126-29579350)
chr5 (65-149)||(41590627-41590711)
chr5 (131-210)||(25856903-25856982)
chr5 (162-213)||(33170286-33170337)
chr5 (65-150)||(4297833-4297918)
chr5 (140-229)||(35122151-35122240)
chr5 (65-213)||(42928662-42928810)
chr5 (115-207)||(27796065-27796157)
[»] chr1 (20 HSPs)
chr1 (95-244)||(27393379-27393528)
chr1 (108-228)||(20987729-20987849)
chr1 (135-301)||(32352683-32352849)
chr1 (109-229)||(33142658-33142778)
chr1 (65-197)||(52692002-52692134)
chr1 (65-305)||(38070363-38070602)
chr1 (65-300)||(25504368-25504603)
chr1 (65-215)||(21405368-21405518)
chr1 (100-305)||(3544470-3544675)
chr1 (113-205)||(13867302-13867394)
chr1 (65-229)||(22191227-22191391)
chr1 (113-305)||(45795854-45796046)
chr1 (65-215)||(3074276-3074426)
chr1 (79-184)||(28358435-28358540)
chr1 (140-241)||(34853081-34853182)
chr1 (100-208)||(1248052-1248160)
chr1 (139-295)||(20796262-20796418)
chr1 (100-152)||(25252182-25252234)
chr1 (109-175)||(19042671-19042737)
chr1 (157-301)||(7396095-7396239)
[»] chr6 (29 HSPs)
chr6 (100-305)||(1104316-1104521)
chr6 (112-305)||(15987879-15988072)
chr6 (74-305)||(26514264-26514495)
chr6 (65-301)||(502905-503141)
chr6 (65-231)||(29056050-29056216)
chr6 (111-305)||(15511195-15511388)
chr6 (100-181)||(10919957-10920038)
chr6 (73-229)||(13086078-13086234)
chr6 (155-244)||(21549469-21549558)
chr6 (65-303)||(32186214-32186452)
chr6 (100-197)||(25350788-25350885)
chr6 (129-210)||(28575925-28576005)
chr6 (112-301)||(33640495-33640684)
chr6 (65-168)||(18588880-18588983)
chr6 (65-297)||(11469100-11469331)
chr6 (100-305)||(14843506-14843711)
chr6 (109-170)||(34180499-34180560)
chr6 (111-214)||(12107091-12107194)
chr6 (131-210)||(17577182-17577261)
chr6 (131-242)||(17605766-17605877)
chr6 (65-208)||(19256171-19256314)
chr6 (140-242)||(23065478-23065580)
chr6 (65-150)||(10362664-10362749)
chr6 (79-160)||(19350489-19350570)
chr6 (65-169)||(7956176-7956279)
chr6 (110-205)||(14551979-14552073)
chr6 (135-301)||(15674430-15674596)
chr6 (86-160)||(29976522-29976596)
chr6 (135-208)||(23346933-23347006)
[»] scaffold0026 (1 HSPs)
scaffold0026 (62-284)||(67608-67830)
[»] scaffold0131 (1 HSPs)
scaffold0131 (126-301)||(3929-4104)
[»] scaffold0113 (1 HSPs)
scaffold0113 (111-190)||(36081-36160)
[»] scaffold0002 (2 HSPs)
scaffold0002 (126-301)||(327508-327683)
scaffold0002 (126-301)||(312054-312229)
[»] scaffold1350 (1 HSPs)
scaffold1350 (154-298)||(164-308)
[»] scaffold0029 (1 HSPs)
scaffold0029 (126-301)||(134227-134402)
[»] scaffold0189 (1 HSPs)
scaffold0189 (65-175)||(6619-6729)
[»] scaffold0043 (1 HSPs)
scaffold0043 (100-305)||(33978-34183)
[»] scaffold0024 (1 HSPs)
scaffold0024 (76-145)||(86730-86799)
[»] scaffold0036 (1 HSPs)
scaffold0036 (157-229)||(3024-3096)


Alignment Details
Target: chr4 (Bit Score: 300; Significance: 1e-169; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 2 - 305
Target Start/End: Original strand, 2365474 - 2365777
Alignment:
Q  2 cacagacaagacaaaaacagatgttgagtagtctctaaccacccacctccttcaatgccaccaccaccatgaagaaccactccgacccccatccttcgac 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  2365474 cacagacaagacaaaaacagatgttgagtagtctctaaccacccacctccttcaatgccaccaccaccatgaagaaccactccgacccccatccttcaac 2365573  T
Q  102 ctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2365574 ctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatat 2365673  T
Q  202 taaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2365674 taaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 2365773  T
Q  302 tccc 305  Q
    ||||    
T  2365774 tccc 2365777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 231
Target Start/End: Original strand, 9777909 - 9778067
Alignment:
Q  73 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 172  Q
    ||||| ||||||| |||||| || || |||||||  ||||||||| |||||| || ||||||||||||||||||| ||  ||| |||||||||  | |||    
T  9777909 aagaaacactccggcccccaaccgtcaacctcccatcctcctcactataacgcgctaccaacaccctataccatatactacctttatcaactagtaacct 9778008  T
Q  173 ccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaac 231  Q
    ||| |||||||||||||||  || |||||||||||| || |||  ||| ||||||||||    
T  9778009 ccaacaccatttttctaattgagaaatattaaactcccttatcctcctcacccccaaac 9778067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 65 - 298
Target Start/End: Complemental strand, 55725315 - 55725082
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| ||||||| |||||| |||||||||| | | |  ||  ||||| ||||||| | ||| |||||||||||||||||||| ||  ||||||| |||    
T  55725315 ccaccaagaagaacaactccggcccccatcctccaaaccaccatcctccacaccatacctagccaccaacaccctataccataatccatctctatctact 55725216  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttcc 264  Q
    |||| |||||| ||||||||  |||| |||||||  ||||||||||||| |  |||||| ||||| | ||||| |||| |    ||||| | |   ||||    
T  55725215 aacaacctccaacaccatttccctaacaaagcaaagttaaactctctcaacctcctaacacccaaccctccatactccctcctcaaacacaaagaattcc 55725116  T
Q  265 aaccaatccaagaaattttcctatgttcctcact 298  Q
    ||||||||||||||||||| || | |||||||||    
T  55725115 aaccaatccaagaaatttttcttttttcctcact 55725082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 8935605 - 8935748
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| ||||||| |||||| |||||||||| | |||||||   | |||| ||||||||||| || || || |||||||| ||||| || ||||| |||    
T  8935605 ccaccaagaagaacaactccggcccccatcctccaacctcccacacacctcgccataacgagcgactaaaactctataccaaaaaccacccctatccact 8935704  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    ||||||||||| ||||||||  ||| ||| ||||||||||||||    
T  8935705 aacatcctccaacaccatttccctagtaaggcaatattaaactc 8935748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 301
Target Start/End: Original strand, 48805517 - 48805745
Alignment:
Q  73 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 172  Q
    ||||||||||||| | ||||  || | |||||||  || ||||||| |||||||    ||||||||||||||| | ||||||||| |||||||| | |||    
T  48805517 aagaaccactccggcacccaatctccaacctcccatccacctcaccgtaacgagttgtcaacaccctataccacatacctcctctttcaactaatagcct 48805616  T
Q  173 ccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatc 272  Q
    ||| ||| | ||  |||||| ||||||||||||||||||||||  ||| | |||||||| |||||  || ||   |||||||| ||| |||||||||| |    
T  48805617 ccaacacaacttacctaatagagcaatattaaactctctcatcctcctcagccccaaacctccataatcttttaataaacaaatattattccaaccaacc 48805716  T
Q  273 caagaaattttcctatgttcctcactccc 301  Q
    || |||| ||| |||   |||||||||||    
T  48805717 catgaaacttttctaatatcctcactccc 48805745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 298
Target Start/End: Complemental strand, 3129528 - 3129365
Alignment:
Q  135 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttc 234  Q
    ||||||||||| ||||| |||||||| || ||||||| ||| ||||||||  |||| |||||| ||||||||||   || ||  || |||||||||| ||    
T  3129528 accctataccacaaaccacctctatccaccaacatccgccaacaccatttccctaacaaagcattattaaactcctgcagctgtctcacccccaaacctc 3129429  T
Q  235 catgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcact 298  Q
    ||||||||||     |||||||| ||||||| || ||||||  |||||||||||| ||||||||    
T  3129428 catgctcctttttggaacaaacagttttccatcctatccaactaattttcctatgatcctcact 3129365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 205
Target Start/End: Original strand, 2072079 - 2072211
Alignment:
Q  73 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 172  Q
    ||||| ||||||| |||||| |||   |||||| | ||||||||||||| |  || |||| |||||||||||| |  ||||||||||| || ||||||      
T  2072079 aagaaacactccgtcccccaacctctaacctccttgcctcctcaccatatctcgccaccagcaccctataccacatccctcctctatccaccaacatctg 2072178  T
Q  173 ccatcaccatttttctaataaagcaatattaaa 205  Q
    ||||||||||||  |||||||||||||||||||    
T  2072179 ccatcaccatttacctaataaagcaatattaaa 2072211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 4551381 - 4551330
Alignment:
Q  109 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatc 160  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  4551381 cctccacaccataacgagcaaccaacaccctataccaaaaacctcctctatc 4551330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 301
Target Start/End: Complemental strand, 23873015 - 23872849
Alignment:
Q  135 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttc 234  Q
    |||| |||||| ||||| |||||||| || ||||||| ||| ||||||||| |||| ||||| | |||||||||  |||  | ||  ||||||||||  |    
T  23873015 acccgataccacaaaccacctctatctaccaacatccgccaacaccattttcctaacaaagctaaattaaactccttcaatttccgtacccccaaaccgc 23872916  T
Q  235 catgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    ||| ||||||   |||||||||| ||| |||||  | |||||||||||||||||  |||||||||||    
T  23872915 catactccttttttaaacaaacagtttgccaacttaaccaagaaattttcctattatcctcactccc 23872849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 19115019 - 19115110
Alignment:
Q  117 ccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    ||||||||||| || || || |||||||| || || || ||||| ||||||| |||||| ||||||||  ||||||||||||||||||||||    
T  19115019 ccataacgagcgactaaaactctataccaaaatccacccctatccactaacaacctccaacaccatttccctaataaagcaatattaaactc 19115110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 112 - 262
Target Start/End: Complemental strand, 55464435 - 55464285
Alignment:
Q  112 cctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctct 211  Q
    ||||||| || ||||||||||  ||||||||||| ||||| |||||||| ||||||| |||||| ||| ||||  |||| ||  || | |||||||| ||    
T  55464435 cctcaccgtaccgagcaaccagtaccctataccacaaaccacctctatctactaacaacctccaacactatttacctaaaaatccagtgttaaactccct 55464336  T
Q  212 catctacctaacccccaaacttccatgctccttagctaaacaaacattttt 262  Q
    ||||| |||||||| ||  | ||||  || |||  ||||||||||||||||    
T  55464335 catcttcctaaccctcatccctccaaacttctttcctaaacaaacattttt 55464285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 42953041 - 42952950
Alignment:
Q  138 ctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaa 229  Q
    |||||||| |||||| ||||||| || ||||||||||| ||||||||  |||| ||||||| ||||||||| ||| |||| ||||||||||||    
T  42953041 ctataccacaaacctactctatctaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaatct-cctaacccccaa 42952950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 53810448 - 53810548
Alignment:
Q  141 taccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgct 240  Q
    ||||| |||||| ||||||| |||||||||||||| ||||||||   || |||| |||||||||||||  |||  | ||||||| |||||| ||||||||    
T  53810448 taccacaaaccttctctatcgactaacatcctccaacaccatttacatagtaaaacaatattaaactccttcaatttcctaaccaccaaacctccatgct 53810547  T
Q  241 c 241  Q
    |    
T  53810548 c 53810548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 23657828 - 23657971
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| ||||||| ||| || |||||||||| | |||||||   | |||| | |||||| || || || || |||||||| ||||| || ||||| |||    
T  23657828 ccaccaagaagaacaacttcggcccccatcctccaacctcccacacacctcgctataacgggcgactaaaactctataccaaaaaccacccctatccact 23657927  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    |||||||| || ||||||||  ||| ||| ||||||||||||||    
T  23657928 aacatccttcaacaccatttccctagtaaggcaatattaaactc 23657971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 29553341 - 29553238
Alignment:
Q  73 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 172  Q
    ||||||||||||| |||||||||| | |||||||     ||||||||||||| |  || || || |||||||| ||||| |||||||| |||||||||||    
T  29553341 aagaaccactccggcccccatcctccaacctcccacaaacctcaccataacgggtgactaaaactctataccaaaaaccacctctatccactaacatcct 29553242  T
Q  173 ccat 176  Q
    ||||    
T  29553241 ccat 29553238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 244
Target Start/End: Original strand, 7099022 - 7099192
Alignment:
Q  74 agaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctc 173  Q
    |||||||||||| |||||||||| | ||||| |  ||||||||||||| | ||| | ||| |||| |||||| |||||  ||| |||||||||||  |||    
T  7099022 agaaccactccggcccccatcctccaacctctcatcctcctcaccatatctagctatcaaaacccgataccacaaaccctctcgatcaactaacaaactc 7099121  T
Q  174 catcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctcctt 244  Q
    || ||| | ||| | || || ||   ||||||||| |||| || |||||| ||||||| ||||| ||||||    
T  7099122 caacacaactttcccaacaacgcctcattaaactccctcaactgcctaacacccaaacctccatactcctt 7099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 301
Target Start/End: Original strand, 20675623 - 20675789
Alignment:
Q  135 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttc 234  Q
    ||||||||||| ||||| ||||| || || ||||||| ||| ||||||||| |||| ||||| | |||||||||  |||  | ||  ||||||||||  |    
T  20675623 accctataccacaaaccacctctgtccaccaacatccgccaacaccattttcctaacaaagctaaattaaactccttcaatttccgcacccccaaaccac 20675722  T
Q  235 catgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    ||  ||| ||   |||||||||| ||| |||||  | |||||||||||||||||  |||||||||||    
T  20675723 caaactctttttttaaacaaacagtttgccaacataaccaagaaattttcctattatcctcactccc 20675789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 26694548 - 26694602
Alignment:
Q  154 ctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    ||||||| |||||||||||||| ||||||||  ||| ||||||||||||||||||    
T  26694548 ctctatccactaacatcctccaacaccatttacctagtaaagcaatattaaactc 26694602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 54482768 - 54482620
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| ||||||| ||||||||||||||||| | | |  ||  |  || ||||||| | ||| ||||||||||||  |||||| ||  |||||||||||    
T  54482768 ccaccacgaagaacaactccgacccccatcctccaaaccaccatctgccacaccatacctagccaccaacaccctacgccataacccctctctatcaact 54482669  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctca 213  Q
    |||| || ||| ||||||||  |||  |||||||| |||||||| ||||    
T  54482668 aacaaccgccaacaccatttccctagcaaagcaatgttaaactcgctca 54482620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 9690962 - 9691072
Alignment:
Q  74 agaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctc 173  Q
    |||| ||||||| |||||| ||| | |||||||  ||||||||||||| | ||| || | |||||||||||| || || | |||||| || |||| ||||    
T  9690962 agaaacactccggcccccaacctccaacctcccagcctcctcaccatatctagctactagcaccctataccaaaacccacatctatccaccaacaacctc 9691061  T
Q  174 catcaccattt 184  Q
    || ||||||||    
T  9691062 caacaccattt 9691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 19648306 - 19648376
Alignment:
Q  138 ctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    |||||||| ||||| || ||||| |||||||||||||| ||||||||  ||| ||| |||| |||||||||    
T  19648306 ctataccaaaaaccacccctatccactaacatcctccaacaccatttccctagtaaggcaacattaaactc 19648376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 54685150 - 54685260
Alignment:
Q  74 agaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctc 173  Q
    |||||||||| | |||||||||| | |||||||  |   | ||||||| | |||||||||||||  ||||||||| |||| |||||||||||| |  |||    
T  54685150 agaaccactctggcccccatcctccaacctcccatcacgcacaccatacctagcaaccaacacctgataccataaccctcttctatcaactaataatctc 54685249  T
Q  174 catcaccattt 184  Q
    || ||||||||    
T  54685250 caacaccattt 54685260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 301
Target Start/End: Original strand, 19648422 - 19648462
Alignment:
Q  261 ttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    |||||||| |||||||| ||||||||||| |||||||||||    
T  19648422 ttccaacctatccaagacattttcctatgatcctcactccc 19648462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 38445613 - 38445661
Alignment:
Q  108 acctcctcaccataacgagcaaccaacaccctataccataaacctcctc 156  Q
    |||||||||||||||||| | ||||||||||| ||| | ||||||||||    
T  38445613 acctcctcaccataacgaactaccaacaccctgtacaacaaacctcctc 38445661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 3e-57; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 62 - 273
Target Start/End: Original strand, 20004486 - 20004698
Alignment:
Q  62 ccaccaccatgaagaaccactccgaccccc-atccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatc 160  Q
    ||||||||| ||||||| ||||| |||||| ||||| | |||||||||| |||||||| |||| ||| ||||| ||||||||||| ||| |||| |||||    
T  20004486 ccaccaccacgaagaacaactccaaccccccatcctccaacctccctacatcctcaccgtaaccagccaccaataccctataccacaaatctcccctatc 20004585  T
Q  161 aactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacattt 260  Q
    ||||||||||||||| |||||||||||||| |||||| | |||||||| ||||||| |||||||||||||| |||||| |||||| ||||||||||||||    
T  20004586 aactaacatcctccaacaccatttttctaacaaagcagtgttaaactccctcatcttcctaacccccaaacctccatgatccttatctaaacaaacattt 20004685  T
Q  261 ttccaaccaatcc 273  Q
    |||||| ||||||    
T  20004686 ttccaaacaatcc 20004698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 78 - 303
Target Start/End: Original strand, 32191609 - 32191825
Alignment:
Q  78 ccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatc 177  Q
    |||||||| |||||||||| | ||||||||||||| |||||||||| ||| | ||| | |||||| |  ||| |||||||||||| ||||||||| || |    
T  32191609 ccactccggcccccatcctccaacctccctacctcatcaccataacaagccatcaatatcctatatcgcaaatctcctctatcaattaacatccttcagc 32191708  T
Q  178 accatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaaga 277  Q
    |||||||| |||         | |||||||| ||||| |  ||||||| ||||| ||||| ||||||| |||||||||||| |||||||||||| || ||    
T  32191709 accattttccta---------tgttaaactccctcatttgtctaaccctcaaacctccatactccttatctaaacaaacatgtttccaaccaattcatga 32191799  T
Q  278 aattttcctatgttcctcactccctc 303  Q
    ||||||| ||||||||||||||||||    
T  32191800 aattttcatatgttcctcactccctc 32191825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 36804725 - 36804827
Alignment:
Q  140 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 239  Q
    |||||| |||||| |||| || |||||||||||||| ||||||||| ||| ||||||||||||||||||| ||| || |||||||||||| | |||||||    
T  36804725 ataccacaaaccttctctctctactaacatcctccaacaccattttcctagtaaagcaatattaaactctttcaacttcctaacccccaaccatccatgc 36804824  T
Q  240 tcc 242  Q
    |||    
T  36804825 tcc 36804827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 283
Target Start/End: Original strand, 35488443 - 35488586
Alignment:
Q  140 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 239  Q
    |||||| || ||| ||||||||||||||| |||||| ||||||||  ||| |||||||| |||||||||  ||| || |||||||||||||| |||||||    
T  35488443 ataccacaacccttctctatcaactaacaacctccaacaccatttacctagtaaagcaacattaaactccttcaacttcctaacccccaaacctccatgc 35488542  T
Q  240 tccttagctaaacaaacatttttccaaccaatccaagaaatttt 283  Q
    ||| |     |||| ||| | |||||||| ||||||||||||||    
T  35488543 tccattttagaacacacagtattccaacctatccaagaaatttt 35488586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 138 - 301
Target Start/End: Complemental strand, 11234026 - 11233863
Alignment:
Q  138 ctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccat 237  Q
    |||||||| |||||| ||||||| || |||||| |||| ||||||||  |||| ||||||| ||||||||| |||| || |||||||||||| | ||||     
T  11234026 ctataccacaaacctactctatctaccaacatcgtccaacaccatttacctaacaaagcaaaattaaactccctcaacttcctaacccccaaccctccag 11233927  T
Q  238 gctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
     |||||| |   |||| | | | |||||||| ||||||| |||||||| | | |||||||||||    
T  11233926 actcctttgaagaacacaaagtattccaacctatccaagtaattttccgacggtcctcactccc 11233863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 129 - 298
Target Start/End: Original strand, 12646116 - 12646285
Alignment:
Q  129 accaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaaccccca 228  Q
    ||||||||||||||||| || ||  ||||||| ||||||| |||||| ||||||||| |||| ||| |||  ||||||||||||| |  |||||| ||||    
T  12646116 accaacaccctataccacaatccatctctatctactaacaacctccaacaccattttcctaacaaaacaaagttaaactctctcaacctcctaacaccca 12646215  T
Q  229 aacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcact 298  Q
    | | ||||| |||| |    ||||| | |   ||||||||||||||||||||||| || | |||||||||    
T  12646216 accctccatactccctcctcaaacacaaagaattccaaccaatccaagaaatttttcttttttcctcact 12646285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 9409673 - 9409736
Alignment:
Q  166 acatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 229  Q
    ||||| |||| ||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  9409673 acatcttccaacaccacttttctaataaagcaatgttaaactctcttatcttcctaacccccaa 9409736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 8065795 - 8065691
Alignment:
Q  140 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 239  Q
    |||||| || ||| ||||||||||||||| |||||| || |||||  ||| |||||||| ||||||||   ||| || ||| |||||||||| |||||||    
T  8065795 ataccacaacccttctctatcaactaacaacctccaacatcatttacctagtaaagcaacattaaacttcttcaacttcctgacccccaaacctccatgc 8065696  T
Q  240 tcctt 244  Q
    |||||    
T  8065695 tcctt 8065691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 301
Target Start/End: Original strand, 13550709 - 13550884
Alignment:
Q  126 gcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacc 224  Q
    ||||| || ||||||||||| ||| | ||||||||||| |||| |||||| ||||||||  |||| || || |||||||||||  || |||| ||| |||    
T  13550709 gcaactaaaaccctataccacaaatcacctctatcaaccaacaacctccaacaccatttccctaacaatgctatattaaactccttcaatct-cctcacc 13550807  T
Q  225 cccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    |||||||  |||  ||||||   |||||||||| ||| |||||  | |||||| ||||||||||  |||||||||||    
T  13550808 cccaaaccgccacactccttttttaaacaaacagtttgccaacttaaccaagatattttcctattatcctcactccc 13550884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 301
Target Start/End: Original strand, 13551162 - 13551337
Alignment:
Q  126 gcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacc 224  Q
    ||||| || ||||||||||| ||| | ||||||||||| |||| |||||| ||||||||  |||| || || |||||||||||  || |||| ||| |||    
T  13551162 gcaactaaaaccctataccacaaatcacctctatcaaccaacaacctccaacaccatttccctaacaatgctatattaaactccttcaatct-cctcacc 13551260  T
Q  225 cccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    |||||||  |||  ||||||   |||||||||| ||| |||||  | |||||| ||||||||||  |||||||||||    
T  13551261 cccaaaccgccacactccttttttaaacaaacagtttgccaacttaaccaagatattttcctattatcctcactccc 13551337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 28400107 - 28400016
Alignment:
Q  117 ccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    ||||||||||| || || |||  |||||| |  ||| ||||||| |||||||||||||| ||||||||  ||| ||||||||||||||||||    
T  28400107 ccataacgagcgactaaaacctgataccacatcccttctctatcgactaacatcctccaacaccatttacctagtaaagcaatattaaactc 28400016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 43310790 - 43310875
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaac 150  Q
    |||||| |||||||||||||| |||||| ||| | |||||||  ||||||| ||||| |  || ||||||||||||||||| ||||    
T  43310790 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcgccatatctcgccaccaacaccctataccacaaac 43310875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 229
Target Start/End: Complemental strand, 9668607 - 9668451
Alignment:
Q  73 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 172  Q
    |||||| |||||| |||||| ||| | |||||||| |  |||| |||||||| || || |  || |||||||| || ||| ||||||| || ||||||||    
T  9668607 aagaacaactccggcccccaacctccaacctccctccaacctcgccataacgggcgactagaacactataccacaaccctactctatctaccaacatcct 9668508  T
Q  173 ccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 229  Q
    ||| ||| ||||  |||| |||||||  |||||||| |||| |  ||||||||||||    
T  9668507 ccaacactatttacctaacaaagcaaagttaaactccctcaacctcctaacccccaa 9668451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 15018260 - 15018351
Alignment:
Q  117 ccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    ||||||||||| || || || |||||||| || || || ||||| ||| ||| |||||| ||||||||  ||||||| ||||||||||||||    
T  15018260 ccataacgagcgactaaaactctataccaaaatccacccctatccactgacaacctccaacaccatttccctaataaggcaatattaaactc 15018351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 28598519 - 28598598
Alignment:
Q  110 ctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttcta 189  Q
    |||||||| ||||||||| ||||||||  ||||  |||| || |||||||| || ||||| ||||| |||||||||||||    
T  28598519 ctcctcactataacgagctaccaacactttatattataatccccctctatccaccaacatactccaacaccatttttcta 28598598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 22724974 - 22724908
Alignment:
Q  139 tataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaa 205  Q
    ||||||| ||||| || ||||| |||||||||||||| ||||||||| ||| ||| |||| ||||||    
T  22724974 tataccaaaaaccacccctatccactaacatcctccaacaccattttcctagtaaggcaacattaaa 22724908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 37445621 - 37445699
Alignment:
Q  62 ccaccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacacccta 140  Q
    ||||||||| ||||||| |||||| |||||||||| | ||||||   ||||| ||||||| | ||| ||||||||||||    
T  37445621 ccaccaccacgaagaacaactccggcccccatcctccaacctcctgtcctccgcaccatacctagccaccaacacccta 37445699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 26146746 - 26146831
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaac 150  Q
    |||||| ||| |||||||||| |||||| ||| | |||||||  ||||||| ||||| |  || ||||||||||||||||| ||||    
T  26146746 ccaccaagaataaccactccggcccccaacctccaacctcccatcctcctcgccatatctcgccaccaacaccctataccacaaac 26146831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 303
Target Start/End: Complemental strand, 33583931 - 33583798
Alignment:
Q  170 cctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaacca 269  Q
    |||||| ||||||||   ||| ||||| ||||||||||| |||| || ||| |||||||| | ||||| ||||||   ||||||||||    ||||| ||    
T  33583931 cctccaacaccatttacttaacaaagctatattaaactccctcaactgccttacccccaaccctccatactccttttgtaaacaaacagagctccaagca 33583832  T
Q  270 atccaagaaattttcctatgttcctcactccctc 303  Q
    ||||| ||||||||||| |  ||||||| |||||    
T  33583831 atccaggaaattttcctgttatcctcacaccctc 33583798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 5e-53; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 65 - 302
Target Start/End: Complemental strand, 5342821 - 5342584
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| |||||||||||||| |||| ||||| | ||||| ||||||||| | |||||||||| || || || |||||||||||||||| ||||||||||    
T  5342821 ccaccacgaagaaccactccggcccctatcctccaacctctctacctccttaacataacgagccacaaatacgctataccataaacctcttctatcaact 5342722  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttcc 264  Q
    ||||| ||||  | ||||||| |||| |||||||| |||||| | ||||||| || ||||||||||| | |||||||||||  |||||||  |||||| |    
T  5342721 aacattctcctactccattttcctaacaaagcaatgttaaacgccctcatctgcccaacccccaaaccttcatgctccttatataaacaactattttttc 5342622  T
Q  265 aaccaatccaagaaattttcctatgttcctcactccct 302  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  5342621 aaccaatccaagaaattttcatatgttcctcagtccct 5342584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 38774893 - 38774998
Alignment:
Q  155 tctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaa 254  Q
    ||||||||||||||||||||| |||||||||||||| |||||| | |||||||| ||||||  |||||||||||||| ||||||||||||| ||||||||    
T  38774893 tctatcaactaacatcctccagcaccatttttctaacaaagcagtgttaaactccctcatcgtcctaacccccaaacctccatgctccttatctaaacaa 38774992  T
Q  255 acattt 260  Q
    ||||||    
T  38774993 acattt 38774998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 15481292 - 15481188
Alignment:
Q  140 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 239  Q
    |||||| || ||| |||| ||||||||||||||||| ||||||||  ||||||||||||||||||||||  ||| || |||||||||||||| |||||||    
T  15481292 ataccacaacccttctctgtcaactaacatcctccaacaccatttacctaataaagcaatattaaactccttcaacttcctaacccccaaacctccatgc 15481193  T
Q  240 tcctt 244  Q
    |||||    
T  15481192 tcctt 15481188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 24926222 - 24926118
Alignment:
Q  140 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 239  Q
    |||||| |||||| ||||||| |||||||||||||| ||||||||||||| ||| ||||||||||||||| ||| || |||||||| ||| | |||||||    
T  24926222 ataccacaaaccttctctatccactaacatcctccaacaccatttttctagtaaggcaatattaaactctttcaacttcctaaccctcaaccctccatgc 24926123  T
Q  240 tcctt 244  Q
    |||||    
T  24926122 tcctt 24926118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 25024445 - 25024333
Alignment:
Q  73 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 172  Q
    |||||| ||||||||||||| ||  | |||||||| ||||||||||||| | |||  |||||||||||||||| |||||  ||||||| |||||||||||    
T  25024445 aagaacaactccgacccccaaccgccaacctccctgcctcctcaccatatctagcttccaacaccctataccaaaaaccatctctatccactaacatcct 25024346  T
Q  173 ccatcaccatttt 185  Q
    ||| |||||||||    
T  25024345 ccaacaccatttt 25024333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 244
Target Start/End: Original strand, 36709516 - 36709620
Alignment:
Q  140 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 239  Q
    |||||| || ||| |||| ||||||||||||||||| ||||||||  ||| ||||||||||||||||||  ||| || |||||||||||||| |||||||    
T  36709516 ataccacaacccttctctgtcaactaacatcctccaacaccatttacctagtaaagcaatattaaactccttcaacttcctaacccccaaacctccatgc 36709615  T
Q  240 tcctt 244  Q
    |||||    
T  36709616 tcctt 36709620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 305
Target Start/End: Complemental strand, 40513285 - 40513093
Alignment:
Q  113 ctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc 212  Q
    ||||||||| ||||| ||||  ||||||||||||||||| |||||||| || ||||||| ||| ||||||||  |||| |||||| ||||||| ||   |    
T  40513285 ctcaccataccgagctaccaggaccctataccataaaccacctctatccaccaacatccgccaacaccatttacctaacaaagcactattaaaatcctgc 40513186  T
Q  213 atctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctccc 305  Q
    | || ||| ||||||||||  |||| |||||||  ||| ||||||    ||||| | | ||| ||||||||||| | ||||||||||||||||    
T  40513185 aacttcctcacccccaaacccccatactccttacgtaagcaaacagagctccaagctacccaggaaattttcctgttttcctcactccctccc 40513093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 229
Target Start/End: Original strand, 44888435 - 44888599
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| |||||| ||||||||||| || ||  | |||||||  |||||||||||||||| || ||||||||||||||||| | ||  ||  ||||||||    
T  44888435 ccaccacgaagaaacactccgaccctcaaccaccaacctcccatcctcctcaccataacgcgccaccaacaccctataccacatactacccttatcaact 44888534  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 229  Q
    || | |||||| ||||||||  |||| | || || ||||||||| ||||||  ||| ||||||||    
T  44888535 aataacctccaacaccatttacctaacagagaaacattaaactccctcatcctcctcacccccaa 44888599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 208
Target Start/End: Original strand, 53941869 - 53941977
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 199  Q
    |||||||  ||||||||||||| || || ||||||||| ||||||| || ||  ||||||| || ||||||||||| ||||||||| |||||||||||      
T  53941869 acctcccagcctcctcaccataccgcgccaccaacaccttataccagaacccctctctatccaccaacatcctccaacaccattttcctaataaagcata 53941968  T
Q  200 attaaactc 208  Q
    |||||||||    
T  53941969 attaaactc 53941977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 305
Target Start/End: Original strand, 55367155 - 55367380
Alignment:
Q  79 cactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatca 178  Q
    ||||||| |||||  ||| | ||||| || ||||||||||||| |  || | ||| ||| ||||||| || || ||||||||||||||||||||||| ||    
T  55367155 cactccggccccctacctccaacctctctgcctcctcaccatatctcgctaacaaaaccttataccacaacccacctctatcaactaacatcctccaaca 55367254  T
Q  179 ccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaa 278  Q
    ||||||| |||| || |||| |||||| ||  ||| || ||| |||||| |||  |||| ||||||   | |||||| ||  |||||| | ||||| |||    
T  55367255 ccattttcctaacaacgcaagattaaattccttcaacttcctcaccccc-aacccccatactcctttcgtgaacaaatataattccaagcgatccaggaa 55367353  T
Q  279 attttcctatgttcctcactccctccc 305  Q
    |||||||| |  |||||||||||||||    
T  55367354 attttcctgttgtcctcactccctccc 55367380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 108 - 213
Target Start/End: Original strand, 9510326 - 9510431
Alignment:
Q  108 acctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaact 207  Q
    |||||||||||||| |  ||| ||||||||| |||||| ||||| ||||||| ||||||||||||||| ||||| ||| |||| | ||  ||||||||||    
T  9510326 acctcctcaccataccttgcagccaacacccgataccaaaaaccacctctattaactaacatcctccaacaccactttcctaacatagatatattaaact 9510425  T
Q  208 ctctca 213  Q
    | ||||    
T  9510426 ccctca 9510431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 108 - 213
Target Start/End: Original strand, 9518301 - 9518406
Alignment:
Q  108 acctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaact 207  Q
    |||||||||||||| |  ||| ||||||||| |||||| ||||| ||||||| ||||||||||||||| ||||| ||| |||| | ||  ||||||||||    
T  9518301 acctcctcaccataccttgcagccaacacccgataccaaaaaccacctctattaactaacatcctccaacaccactttcctaacatagatatattaaact 9518400  T
Q  208 ctctca 213  Q
    | ||||    
T  9518401 ccctca 9518406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 52250733 - 52250648
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaac 150  Q
    |||||| |||||||||||||| |||||| ||| | |||||||  ||||||||||||| |  || ||||||||||||||||||||||    
T  52250733 ccaccaagaagaaccactccggcccccaacctccaacctcccatcctcctcaccatatctcgccaccaacaccctataccataaac 52250648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 208
Target Start/End: Original strand, 6825360 - 6825496
Alignment:
Q  72 gaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcc 171  Q
    |||||||| ||||| |||||| ||  | |||||||  ||||||||||||| || || ||||||||||||||||||||||  |  || ||||| ||||  |    
T  6825360 gaagaacctctccggcccccaaccgccaacctcccatcctcctcaccataccgcgccaccaacaccctataccataaactactcctctcaaccaacaaac 6825459  T
Q  172 tccatcaccatttttctaataaagcaatattaaactc 208  Q
     ||| ||||||||  ||||||| ||||||||||||||    
T  6825460 gccaacaccatttgcctaataacgcaatattaaactc 6825496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 21740057 - 21739896
Alignment:
Q  140 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaaacttccatg 238  Q
    ||||||||||||| ||||||| || ||||||||||| ||||||||  |||| ||||||| ||||||||| ||| |||| ||| |||||||| | ||||      
T  21740057 ataccataaacctactctatctaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaatct-ccttacccccaaccctccaga 21739959  T
Q  239 ctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    |||||| |   |||| | | | |||||||| ||||||| |||||||| | | |||||||||||    
T  21739958 ctcctttgaagaacacaaagtattccaacctatccaagtaattttccgacggtcctcactccc 21739896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 301
Target Start/End: Complemental strand, 22734266 - 22734096
Alignment:
Q  131 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaa 230  Q
    ||||||||||||| | | ||  |||||||| ||||||| |  ||| ||||||||  ||| ||||||||||||||| || || | || ||| ||| ||||     
T  22734266 caacaccctatacaacagactacctctatcgactaacaactaccaacaccatttacctagtaaagcaatattaaattcccttaacttcctcacctccaat 22734167  T
Q  231 cttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    | ||||| |||||||   ||||||||| | |||||||  | |||||| ||||||||||| |||||||||||    
T  22734166 cctccatactccttacgcaaacaaacaatattccaacgtaaccaagatattttcctatgatcctcactccc 22734096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 305
Target Start/End: Original strand, 34829994 - 34830164
Alignment:
Q  135 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttc 234  Q
    |||||||||||||| ||  || |||| || ||||||| ||| ||||||||  |||| |||||| ||||||| ||   || || ||| |||||||| | ||    
T  34829994 accctataccataacccaactatatccaccaacatccgccaacaccatttacctaacaaagcactattaaattcatgcaacttcctcacccccaaccctc 34830093  T
Q  235 catgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctccc 305  Q
    ||| |||||||  ||||||||||    ||||| ||||||| ||||||||||| |  |||||||||||||||    
T  34830094 catactccttacgtaaacaaacagagctccaagcaatccaggaaattttcctgttatcctcactccctccc 34830164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 285
Target Start/End: Complemental strand, 14864074 - 14863854
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| ||||||| |||||| |||||  ||| | |||||||  || |||| |||||||  || || |  || ||||||||||||||| || |||| ||     
T  14864074 ccaccaagaagaacaactccggccccccacctccaacctcccacccacctcgccataacaggcgacaagaacactataccataaacctactttatcgacc 14863975  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaaacttccatgctccttagctaaacaaacatttttc 263  Q
    ||||||||||| ||||||||  |||| || |||| ||||||||| ||| |||| |||||||||||| | ||||  ||||||||   |||| | | | |||    
T  14863974 aacatcctccaacaccatttacctaacaatgcaaaattaaactccctcaatct-cctaacccccaaccctccagactccttagaagaacataaagtattc 14863876  T
Q  264 caaccaatccaagaaattttcc 285  Q
    ||||| ||||||| ||||||||    
T  14863875 caacctatccaagtaattttcc 14863854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 42674973 - 42674869
Alignment:
Q  140 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaaacttccatg 238  Q
    |||||| || ||| |||||||||||||||||||||| ||||||||  ||| |||| |||||||||||||  || |||| ||| ||| |||||| ||||||    
T  42674973 ataccacaacccttctctatcaactaacatcctccaacaccatttacctagtaaaacaatattaaactccttcaatct-cctcacctccaaacctccatg 42674875  T
Q  239 ctcctt 244  Q
    ||||||    
T  42674874 ctcctt 42674869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 38774266 - 38774301
Alignment:
Q  6 gacaagacaaaaacagatgttgagtagtctctaacc 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  38774266 gacaagacaaaaacagatgttgagtagtctctaacc 38774301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 45684759 - 45684850
Alignment:
Q  117 ccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    ||||||||||| || || |||  |||||| |  ||| ||||||| |||||||||||||| ||||||||  ||| ||||||||||||||||||    
T  45684759 ccataacgagcgactaaaacctgataccacagcccttctctatcgactaacatcctccaacaccatttacctagtaaagcaatattaaactc 45684850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 12341798 - 12341716
Alignment:
Q  131 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctca 213  Q
    ||||||||||  ||| |||||||| ||||||||||||| || ||| ||||||||  | || |||||||| |||||||||||||    
T  12341798 caacaccctactccacaaacctcccctatcaactaacagccgccaacaccatttccccaacaaagcaatgttaaactctctca 12341716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 48569598 - 48569500
Alignment:
Q  115 caccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctca 213  Q
    ||||||| | ||| ||||||||||||  ||| || ||  ||||||||||||||| || ||| |||||||| ||||  |||||||| |||||||||||||    
T  48569598 caccatacctagccaccaacaccctacgccacaacccatctctatcaactaacaaccgccaacaccatttctctagcaaagcaatgttaaactctctca 48569500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 190
Target Start/End: Original strand, 35537307 - 35537424
Alignment:
Q  73 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 172  Q
    ||||| ||||||| |||||| ||| | | |||| | ||||||||||| |   || | ||||||  |||||||| |||||||| ||||||||||| |||||    
T  35537307 aagaatcactccggcccccaacctccaatctccttgcctcctcaccacacttagaagccaacaatctataccaaaaacctccactatcaactaaaatcct 35537406  T
Q  173 ccatcaccatttttctaa 190  Q
    ||| ||||| ||||||||    
T  35537407 ccaacaccacttttctaa 35537424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 962772 - 962624
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| || |||| ||||||||||||||||| | | |  ||  || || ||||||| | ||| || |||||||||  ||| || ||  |||| || |||    
T  962772 ccaccaagatgaacaactccgacccccatcctccaaaccaccatccgccccaccatacctagccactaacaccctacgccacaacccatctctctctact 962673  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctca 213  Q
    |||| |||||| ||||||||| |||| ||||||||||||||||| ||||    
T  962672 aacaacctccaacaccattttcctaacaaagcaatattaaactccctca 962624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 213
Target Start/End: Original strand, 10868186 - 10868282
Alignment:
Q  117 ccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctca 213  Q
    ||||||||||| || |  || ||||| || |||||| ||||||| || ||||||||||| ||||||||  |||| ||||||| ||||||||| ||||    
T  10868186 ccataacgagcgactagaacactatatcagaaacctactctatctaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctca 10868282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 52907780 - 52907708
Alignment:
Q  109 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacca 181  Q
    |||||||||| ||||| || || |||||||||||||| || ||  |||||||||||||||| ||||| |||||    
T  52907780 cctcctcaccgtaacgggccactaacaccctataccacaacccctctctatcaactaacattctccaacacca 52907708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 48930255 - 48930342
Alignment:
Q  63 caccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaac 150  Q
    |||||||| | |||||||||||  |||||| ||| | |||||||  ||||||||||||| |  || ||||| ||||||||||||||||    
T  48930255 caccaccacgcagaaccactccagcccccaacctccaacctcccatcctcctcaccatatctcgccaccaaaaccctataccataaac 48930342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 19875788 - 19875869
Alignment:
Q  79 cactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatc 160  Q
    ||||||| |||||| ||| | |||||| | ||||||||||||| |  || ||||||||||||||||| || || ||||||||    
T  19875788 cactccggcccccaacctccaacctccttgcctcctcaccatatctcgccaccaacaccctataccaaaacccacctctatc 19875869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 31675497 - 31675594
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagca 197  Q
    |||||||| ||||||||||||| |   | |||| |||||||||||| ||||| |||||||| || ||||| | ||| ||||||||  |||| ||||||    
T  31675497 acctccctgcctcctcaccatatctcaccaccagcaccctataccaaaaaccacctctatccaccaacattcgccaacaccatttacctaacaaagca 31675594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 31920925 - 31920828
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagca 197  Q
    |||||||| ||||||||||||| |   | |||| |||||||||||| ||||| |||||||| || ||||| | ||| ||||||||  |||| ||||||    
T  31920925 acctccctgcctcctcaccatatctcaccaccagcaccctataccaaaaaccacctctatccaccaacattcgccaacaccatttacctaacaaagca 31920828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 18381653 - 18381705
Alignment:
Q  129 accaacaccctataccataaacctcctctatcaactaacatcctccatcacca 181  Q
    ||||| |||| ||||||||| |||||||||||||| ||||| ||||| |||||    
T  18381653 accaaaacccaataccataaccctcctctatcaaccaacattctccaacacca 18381705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 4e-38; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 73 - 305
Target Start/End: Original strand, 20918499 - 20918730
Alignment:
Q  73 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 172  Q
    |||||||||||||||||||| |   | |||||||| ||| ||||||||||||||  || | |||||||||||| |||||||||||||| ||||||| |||    
T  20918499 aagaaccactccgacccccaactggcaacctccctgccttctcaccataacgagttactagcaccctataccacaaacctcctctatctactaacaacct 20918598  T
Q  173 ccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatc 272  Q
    | | ||||||||| |||  |||||| | ||||||||   ||| | ||||| |||||| | || |  ||||||  |||||||||||||||||||||||||     
T  20918599 cgaacaccattttcctagcaaagcagtgttaaactcctgcattttcctaa-ccccaaccctctagactcctttcctaaacaaacatttttccaaccaatg 20918697  T
Q  273 caagaaattttcctatgttcctcactccctccc 305  Q
    ||||||||||||||||  |||||||||||||||    
T  20918698 caagaaattttcctattatcctcactccctccc 20918730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 103 - 283
Target Start/End: Original strand, 23811557 - 23811737
Alignment:
Q  103 tccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatatt 202  Q
    ||||| |||||||||| |||||||| ||||||| ||||||||| ||||||| | | || ||||||| |||||| |||||||| ||||| |||| ||| ||    
T  23811557 tccctgcctcctcaccgtaacgagctaccaacaacctataccacaaacctcatatgtctactaacaacctccagcaccatttatctaacaaagaaatgtt 23811656  T
Q  203 aaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaatttt 283  Q
    |||||||||||||| |||||| |  || |  ||| |||| ||   |||||||||||||||||||||||||||| |||||||    
T  23811657 aaactctctcatctgcctaactcataacccgccaagctcttttcgtaaacaaacatttttccaaccaatccaataaatttt 23811737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 255
Target Start/End: Complemental strand, 19545003 - 19544821
Alignment:
Q  73 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 172  Q
    ||||||||||||| |||||| ||| | ||||| || ||||||||||||| || |   |||||||||||||||| || ||  ||||||| || |||||||     
T  19545003 aagaaccactccggcccccaacctccaacctctctgcctcctcaccatatcgtgtcgccaacaccctataccaaaacccatctctatccaccaacatccg 19544904  T
Q  173 ccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaa 255  Q
    ||| ||||||||  ||||||| ||| |||||||||| |||| || ||| ||||| || | ||||| |||||||  ||||||||    
T  19544903 ccaacaccatttgcctaataaggcactattaaactccctcaactgcctgacccctaaccctccatactccttacgtaaacaaa 19544821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 100 - 190
Target Start/End: Complemental strand, 23054545 - 23054455
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaa 190  Q
    |||||||| ||||||||||||  | |||  |||||||||||||||| || |||||||||||||||||||||||| | ||||||||| ||||    
T  23054545 acctccctgcctcctcaccatgtctagccgccaacaccctataccaaaaccctcctctatcaactaacatcctctaacaccattttcctaa 23054455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 241
Target Start/End: Original strand, 18671701 - 18671877
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcct-caccataacgagcaaccaacaccctataccataaacctcctctatcaac 163  Q
    ||||||||||||| ||||||| |||||  ||| | ||||||| |||| || | ||||||||||| || || ||   |||||| || ||| ||||||||||    
T  18671701 ccaccatgaagaaacactccggccccccacctccaacctccc-acctacttcgccataacgagcgactaaaacatgataccacaaccctgctctatcaac 18671799  T
Q  164 taacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctc 241  Q
    |||||||||||| ||||||||  ||| |||||||| |||||| ||  ||| || ||||||| |||||| |||||||||    
T  18671800 taacatcctccaacaccatttacctagtaaagcaacattaaattccttcaacttcctaaccaccaaacctccatgctc 18671877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 4344393 - 4344469
Alignment:
Q  109 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttt 185  Q
    ||||||||||||||||||| || ||||||||||||||||||||   ||||||| ||| ||||||||| |||||||||    
T  4344393 cctcctcaccataacgagccactaacaccctataccataaaccatttctatcatctagcatcctccaacaccatttt 4344469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 229
Target Start/End: Original strand, 17056060 - 17056224
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| |||||| ||||||| |||||| ||  | |||||||  |||||||||||||||| || ||||||||||||||||| | ||  ||  ||||||||    
T  17056060 ccaccacgaagaaacactccggcccccaaccaccaacctcccatcctcctcaccataacgcgccaccaacaccctataccacatactacccttatcaact 17056159  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 229  Q
    || | |||||| ||||||||  |||| | || || ||||||||| ||||||  ||| ||||||||    
T  17056160 aataacctccaacaccatttacctaacagagaaacattaaactccctcatcctcctcacccccaa 17056224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 184
Target Start/End: Original strand, 20349529 - 20349613
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccattt 184  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||||||| | | ||||||| || |||||| |||| ||||||||    
T  20349529 acctccctgcctcctcaccataccgagccaccaacaccctataccataacctttctctatctaccaacatcatccagcaccattt 20349613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 213
Target Start/End: Original strand, 34104016 - 34104156
Alignment:
Q  73 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 172  Q
    ||||||||||||  |||||||||| | |||||| | |||||||||| ||||| || ||||||||||||||||| || ||  || |||| |  ||||||||    
T  34104016 aagaaccactccagcccccatcctccaacctccttgcctcctcaccgtaacgcgccaccaacaccctataccaaaacccctctttatccatcaacatcct 34104115  T
Q  173 ccatcaccatttttctaataaagcaatattaaactctctca 213  Q
    ||| |||||||| |||| |||  || |||||||||| ||||    
T  34104116 ccagcaccatttgtctagtaagacactattaaactccctca 34104156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 11341337 - 11341500
Alignment:
Q  75 gaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctcc 174  Q
    |||| |||||| |||||  ||| | |||||||| ||||||||||||| | |||| |||||||||||||||| || ||   ||||| ||| ||||||||||    
T  11341337 gaacaactccggcccccgacctccaacctccctgcctcctcaccatacctagcagccaacaccctataccaaaatccctatctataaaccaacatcctcc 11341436  T
Q  175 atcaccatttttctaataaagc-aatattaaactctctcatctacctaacccccaaacttccat 237  Q
    | ||||||||| |||| | ||| || ||||||||| |||| |  | |||||||||||| |||||    
T  11341437 aacaccattttcctaacatagctaaaattaaactccctcaaccgcgtaacccccaaacctccat 11341500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 74 - 229
Target Start/End: Complemental strand, 13553784 - 13553629
Alignment:
Q  74 agaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctc 173  Q
    ||||| |||||| |||||| ||| | |||||||| |  |||| |||||||| || || |  || |||||||| || ||| ||||||| || |||||||||    
T  13553784 agaacaactccggcccccaacctccaacctccctccaacctcgccataacgggcgactagaacactataccacaaccctactctatctaccaacatcctc 13553685  T
Q  174 catcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 229  Q
    || |||||||| ||||| ||||||| ||||||||| |||| |  ||||||||||||    
T  13553684 caacaccatttatctaacaaagcaaaattaaactccctcaacctcctaacccccaa 13553629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 18768014 - 18768110
Alignment:
Q  140 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaaacttcca 236  Q
    |||||| || ||| |||||||||||||||||||||| ||||||||  ||| ||||||||||||||||||  || |||| |||||||||||||| ||||    
T  18768014 ataccacaacccttctctatcaactaacatcctccaacaccatttacctagtaaagcaatattaaactccttcaatct-cctaacccccaaacctcca 18768110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 112 - 301
Target Start/End: Original strand, 45993153 - 45993342
Alignment:
Q  112 cctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctct 211  Q
    |||| |||||||| || || || || |||||||| ||||| || ||||| |||||||||||||| ||||||||  ||| ||| |||| |||||||||  |    
T  45993153 cctcgccataacgggcgactaaaactctataccaaaaaccacccctatccactaacatcctccaacaccatttccctagtaatgcaacattaaactcctt 45993252  T
Q  212 catctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    || ||  |||||||| || | ||||  ||||||    | |||||||   |||||||| |||||||| ||||||||||| |||||||||||    
T  45993253 caactgtctaacccctaaccctccaaactccttctggagacaaacagagttccaacctatccaagacattttcctatgatcctcactccc 45993342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 5327370 - 5327458
Alignment:
Q  141 taccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 229  Q
    |||||||||||| ||||||| |||||||||||||| ||||||||  ||| |||||||| |||||||||  ||| || |||||| |||||    
T  5327370 taccataaaccttctctatccactaacatcctccaacaccatttccctagtaaagcaagattaaactccttcaacttcctaactcccaa 5327458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 148
Target Start/End: Complemental strand, 25018927 - 25018844
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataa 148  Q
    |||||| ||||||||||| ||||||||| ||| | |||||||  ||||||||||||| |  || ||||||||||||||||||||    
T  25018927 ccaccaagaagaaccacttcgacccccaacctccaacctcccagcctcctcaccatatcttgccaccaacaccctataccataa 25018844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 34457692 - 34457590
Alignment:
Q  140 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaaacttccatg 238  Q
    |||||| || ||| |||||||||||||||||  ||| ||||||||  ||| ||||||||||||||||||  || |||| |||||||||||||| ||||||    
T  34457692 ataccacaacccttctctatcaactaacatcacccaacaccatttacctagtaaagcaatattaaactccttcaatct-cctaacccccaaacctccatg 34457594  T
Q  239 ctcc 242  Q
    ||||    
T  34457593 ctcc 34457590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 244
Target Start/End: Complemental strand, 36227683 - 36227580
Alignment:
Q  141 taccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgct 240  Q
    |||||||||||| ||||||||||||||||||||||  |||| ||  ||| |||||||| |||||||||  |||  | ||||| |||||| | ||||||||    
T  36227683 taccataaaccttctctatcaactaacatcctccaataccacttacctagtaaagcaacattaaactccttcaatttcctaaaccccaaccctccatgct 36227584  T
Q  241 cctt 244  Q
    ||||    
T  36227583 cctt 36227580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 41340140 - 41340207
Alignment:
Q  141 taccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    ||||| |||||| ||||||| |||||||||||||| ||||||||  ||| |||||||| |||||||||    
T  41340140 taccacaaaccttctctatccactaacatcctccaacaccatttccctagtaaagcaaaattaaactc 41340207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 29916671 - 29916737
Alignment:
Q  109 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctcca 175  Q
    ||||||||||||||||||| ||||| ||||| |||||||| || | ||| || ||||||||||||||    
T  29916671 cctcctcaccataacgagctaccaataccctgtaccataagccccttctgtccactaacatcctcca 29916737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 33821103 - 33821025
Alignment:
Q  130 ccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    |||| ||||||||||| || ||  |||| || || | ||||||||| |||||||||||||||||||| |||||||||||    
T  33821103 ccaaaaccctataccagaacccatctctgtctaccagcatcctccaacaccatttttctaataaagctatattaaactc 33821025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 39658962 - 39658864
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcc-tctatcaactaacatcctccatcaccatttttctaataaagca 197  Q
    |||||||  ||||||||||||| || || ||||||||||||||| | || || || |||||| || ||||||||||| ||||||||  |||||||||||    
T  39658962 acctcccagcctcctcaccataccgcgccaccaacaccctatactagaaccccccctctatccaccaacatcctccaacaccatttccctaataaagca 39658864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 12308696 - 12308615
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacca 181  Q
    |||||| | ||||||||||||| |  ||| |||||||||||||||| ||| |||  |||||||||| ||||||||| |||||    
T  12308696 acctccatgcctcctcaccataccttgcagccaacaccctataccaaaaatctctcctatcaactagcatcctccaacacca 12308615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 32815859 - 32815774
Alignment:
Q  130 ccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatc 215  Q
    ||||||||||  |||| || || ||||||||  | | ||||||||| |||||||||||||| | ||||||||||||||| ||||||    
T  32815859 ccaacaccctgaaccacaacccccctctatccgccatcatcctccaacaccatttttctaaaagagcaatattaaactccctcatc 32815774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 166
Target Start/End: Complemental strand, 6336004 - 6335912
Alignment:
Q  74 agaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaa 166  Q
    |||||||||| | |||||||||| | |||||||  |   | ||||||| | |||||||||||||| ||||||||| ||||||||||| |||||    
T  6336004 agaaccactctggcccccatcctccaacctcccatcgcgcacaccatacctagcaaccaacacccgataccataaccctcctctatctactaa 6335912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 17504160 - 17504064
Alignment:
Q  73 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacat 169  Q
    ||||||||||||| |||||||||| | |||||||  |||||||||| || |  || |||||||| | |||||| | |||  ||||||||||||||||    
T  17504160 aagaaccactccggcccccatcctccaacctcccatcctcctcaccgtatctcgccaccaacactcgataccaaagaccatctctatcaactaacat 17504064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 17549054 - 17549150
Alignment:
Q  73 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacat 169  Q
    ||||||||||||| |||||||||| | |||||||  |||||||||| || |  || |||||||| | |||||| | |||  ||||||||||||||||    
T  17549054 aagaaccactccggcccccatcctccaacctcccatcctcctcaccgtatctcgccaccaacactcgataccaaagaccatctctatcaactaacat 17549150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 6335816 - 6335777
Alignment:
Q  262 tccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  6335816 tccaacctacccaagaaattttcctatgttcctcactccc 6335777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 205
Target Start/End: Complemental strand, 27218717 - 27218591
Alignment:
Q  79 cactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatca 178  Q
    ||||||| |||||| ||  | |||||||| ||||||||||||| |  || ||||||||||||||||| || || |||||||| |  |||| || ||| ||    
T  27218717 cactccggcccccaaccgccaacctccctgcctcctcaccatatctcgccaccaacaccctataccaaaatccacctctatctatcaacaaccgccaaca 27218618  T
Q  179 ccatttttctaataaagcaatattaaa 205  Q
    ||||||  |||| ||||| | ||||||    
T  27218617 ccatttacctaacaaagctaaattaaa 27218591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 19735122 - 19735191
Alignment:
Q  138 ctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaact 207  Q
    |||||||| |||||| ||||||| || ||||||||||| ||||||||  |||| || |||| ||||||||    
T  19735122 ctataccacaaacctactctatcgaccaacatcctccaacaccatttacctaacaatgcaaaattaaact 19735191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 213
Target Start/End: Complemental strand, 32482559 - 32482470
Alignment:
Q  124 gagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctca 213  Q
    |||| ||||||||||||| ||| |||||  || |||| |||||||||||||| ||||| ||  |||||| ||| | |||||| |||||||    
T  32482559 gagccaccaacaccctattccacaaaccctctatatctactaacatcctccaacaccacttccctaatagagccaaattaaattctctca 32482470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 184
Target Start/End: Complemental strand, 8752970 - 8752886
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccattt 184  Q
    |||||||  ||||||||||||| |  || |||| |||||||||||| |  ||||||||||| || ||||||||||| ||| ||||    
T  8752970 acctcccagcctcctcaccatatctcgccaccagcaccctataccacatccctcctctatccaccaacatcctccagcactattt 8752886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 22819282 - 22819246
Alignment:
Q  109 cctcctcaccataacgagcaaccaacaccctatacca 145  Q
    |||||||||||||||| || |||||||||||||||||    
T  22819282 cctcctcaccataacgcgctaccaacaccctatacca 22819246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 153 - 305
Target Start/End: Complemental strand, 26774768 - 26774616
Alignment:
Q  153 cctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaac 252  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||||||  ||||||| ||||| |   |||||| ||||| || |||||||||| |||||     
T  26774768 cctctatcaactaacatcctccaacaccattttgctaacaaagcaatggtaaactccctcatttgtgtaaccctcaaacatctatgctccttatctaaat 26774669  T
Q  253 aaacatttttccaaccaatccaagaaattttcctatgttcctcactccctccc 305  Q
    |||  ||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  26774668 aaatgtttttccaaccaatccatgaaattttcctatgttcctcacttcctccc 26774616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 104 - 305
Target Start/End: Original strand, 18187716 - 18187916
Alignment:
Q  104 ccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatatta 203  Q
    |||||||||||||||||| | | |||||| | |||||||||| ||||| |||||||| |||||||  ||||| ||||||||  |||| |||||| | |||    
T  18187716 ccctacctcctcaccatatcaatcaaccagctccctataccacaaaccacctctatctactaacaatctccaacaccatttacctaacaaagcagtgtta 18187815  T
Q  204 aactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctc 303  Q
    ||||| ||| | | |||||||||||| | ||||  ||| ||  ||||||||||| ||||||||| ||||||||||||||||||||  ||||||| |||||    
T  18187816 aactccctcgtatgcctaacccccaaccctccagactcttttcctaaacaaaca-ttttccaactaatccaagaaattttcctattgtcctcacaccctc 18187914  T
Q  304 cc 305  Q
    ||    
T  18187915 cc 18187916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 109 - 298
Target Start/End: Original strand, 8902402 - 8902591
Alignment:
Q  109 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    ||||||||||||||||||| || |||||||||||||| || ||  |||||||||||||||||| ||| ||||||||| |||| | ||| | |||||| ||    
T  8902402 cctcctcaccataacgagccactaacaccctataccacaagccagctctatcaactaacatccgccaacaccattttcctaagagagccagattaaattc 8902501  T
Q  209 tctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcact 298  Q
    |||||||  |||||||||||||| ||| | |||||||   | ||||| | | ||||||| |||||||||  |||||||||| ||| ||||    
T  8902502 tctcatcctcctaacccccaaacctccttcctccttacggacacaaatactattccaactaatccaagatgttttcctatggtccgcact 8902591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 298
Target Start/End: Complemental strand, 16048498 - 16048292
Alignment:
Q  93 tccttcgacctccctacc-tcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaat 191  Q
    |||||| ||||||| ||| ||| | |||||||| || |||| ||||||| | || ||||| |||||||| |  ||||||||||| ||||||||  ||||     
T  16048498 tccttcaacctccccaccctccactccataacgggccaccaccaccctaaagcacaaaccccctctatccatcaacatcctccaacaccatttacctaaa 16048399  T
Q  192 aaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgtt 291  Q
    | ||| || |||||||| ||||||| ||||  |||||| | ||||| ||||||   |||||||||| |||||||| ||||||||||| ||||||||||||    
T  16048398 agagccatgttaaactccctcatctgcctagtccccaaccctccatactcctttcgtaaacaaacacttttccaaacaatccaagaagttttcctatgtt 16048299  T
Q  292 cctcact 298  Q
    |||||||    
T  16048298 cctcact 16048292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 305
Target Start/End: Original strand, 36025096 - 36025292
Alignment:
Q  109 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    ||||||||||||| |  || ||||| || ||||||||||| ||||||||||| || ||||||| ||| ||||||| | ||||||||||||||||||| ||    
T  36025096 cctcctcaccatatctcgccaccaaaactctataccataaccctcctctatccaccaacatccgccaacaccattatcctaataaagcaatattaaattc 36025195  T
Q  209 tctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctccc 305  Q
     |||| || ||| |||||||| |  || |  || |||  |||||||||| |  ||||| | ||||| ||||||||||| |  |||||||||||||||    
T  36025196 actcaactgcctcacccccaatcccccctcttctttacgtaaacaaacagtgctccaagcgatccaggaaattttcctgttatcctcactccctccc 36025292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 244
Target Start/End: Original strand, 23942693 - 23942797
Alignment:
Q  140 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 239  Q
    |||||| || ||| ||||||||||||||| |||||| ||||||||  ||| |||||||| |||||||||  ||| || ||| |||||||||| |||||||    
T  23942693 ataccacaacccttctctatcaactaacaacctccaacaccatttacctagtaaagcaacattaaactccttcaacttcctgacccccaaacctccatgc 23942792  T
Q  240 tcctt 244  Q
    |||||    
T  23942793 tcctt 23942797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 297
Target Start/End: Complemental strand, 28992838 - 28992606
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| |||||| ||||| | |||||| ||||| ||||| |  ||||||||||||||||||| ||||||||||||||||| ||||    | |||| |||    
T  28992838 ccaccacgaagaaacactctggcccccaaccttcaacctctcatcctcctcaccataacgagctaccaacaccctataccacaaactgtttttatcgact 28992739  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttcc 264  Q
    |  | |||||| |||||||| ||||| |   ||||||||||||| ||||||  |   |||||||||| || |  |||||||   | ||||| ||| ||||    
T  28992738 agtaacctccaacaccatttctctaacaggtcaatattaaactccctcatcctctgcacccccaaacctctagactccttactgacacaaatattattcc 28992639  T
Q  265 aaccaatccaagaaattttcctatgttcctcac 297  Q
    || ||| ||| || ||||||||||| |||||||    
T  28992638 aagcaacccatgagattttcctatgatcctcac 28992606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 305
Target Start/End: Original strand, 12341142 - 12341338
Alignment:
Q  109 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    ||||||||||||| |  || ||||  |||||| |||| || ||||||||||| |||||||||||||| ||||| ||| |||| ||||| |||||||| ||    
T  12341142 cctcctcaccatacctcgccaccagtaccctaaaccacaaccctcctctatccactaacatcctccaacaccactttcctaacaaagccatattaaattc 12341241  T
Q  209 tctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctccc 305  Q
      ||| ||  || ||||||||||  |||| ||||||   |||||| ||     ||||| ||||||| ||||||||||| |  |||||||||||||||    
T  12341242 cttcaactgtctcacccccaaacccccattctcctttcgtaaacataccgaactccaagcaatccaggaaattttcctgttatcctcactccctccc 12341338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 228
Target Start/End: Original strand, 15439683 - 15439811
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 199  Q
    |||||||| |||||||||||||  | ||  ||||||||||||||||||||||  ||||||  || ||||||  ||| ||||||||  ||| ||| ||| |    
T  15439683 acctccctgcctcctcaccatactgcgcccccaacaccctataccataaaccatctctattcaccaacatctgccaacaccatttacctagtaaggcact 15439782  T
Q  200 attaaactctctcatctacctaaccccca 228  Q
    ||||||||| |||| || |||||||||||    
T  15439783 attaaactccctcaactgcctaaccccca 15439811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 228
Target Start/End: Original strand, 15530987 - 15531115
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 199  Q
    |||||||| |||||||||||||  | ||  ||||||||||||||||||||||  ||||||  || ||||||  ||| ||||||||  ||| ||| ||| |    
T  15530987 acctccctgcctcctcaccatactgcgcccccaacaccctataccataaaccatctctattcaccaacatctgccaacaccatttacctagtaaggcact 15531086  T
Q  200 attaaactctctcatctacctaaccccca 228  Q
    ||||||||| |||| || |||||||||||    
T  15531087 attaaactccctcaactgcctaaccccca 15531115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 25193627 - 25193751
Alignment:
Q  73 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 172  Q
    ||||| ||||||| |||||  ||| | |||||||  ||||||||||||| ||  | |||||||||| |||||| || ||  ||||||| || ||||||||    
T  25193627 aagaatcactccggccccctacctccaacctcccagcctcctcaccataccgcaccaccaacacccgataccagaacccatctctatccaccaacatcct 25193726  T
Q  173 ccatcaccatttttctaataaagca 197  Q
    ||| ||||||||| |||||||||||    
T  25193727 ccagcaccattttcctaataaagca 25193751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 37165730 - 37165590
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| | |||| ||||||| |||||| ||| | ||| |||  ||||||| ||||| |  || ||||  ||||||||||| || ||||||||||| |||    
T  37165730 ccaccaagtagaaacactccggcccccaacctccaaccgcccatcctcctcgccatatctcgccaccagtaccctataccacaagcctcctctatccact 37165631  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaa 205  Q
    ||||||||||| || || ||| |||||| ||||||||||||    
T  37165630 aacatcctccaacatcactttcctaatagagcaatattaaa 37165590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 20824896 - 20825007
Alignment:
Q  131 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaa 230  Q
    ||||||||||  ||| |||||||| ||||||||||||| |||||| ||||||||  | || |||||||| ||||||||||||| |  |||||| |||||     
T  20824896 caacaccctactccacaaacctcccctatcaactaacagcctccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctaacacccaac 20824995  T
Q  231 cttccatgctcc 242  Q
    | ||||| ||||    
T  20824996 cctccatactcc 20825007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 301
Target Start/End: Original strand, 5585286 - 5585456
Alignment:
Q  131 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaa 230  Q
    ||||||||||||| | | ||  |||||||| ||||||| |  ||| ||||||||  ||| ||||||||||||||| || || | || ||| ||| ||||     
T  5585286 caacaccctatacaacagactacctctatcgactaacaactaccaacaccatttacctagtaaagcaatattaaattcccttaacttcctcacctccaat 5585385  T
Q  231 cttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    | ||||| |||||||   ||||||||| | |||||||  | |||||| ||||||||||| |||||||||||    
T  5585386 cctccatactccttacgcaaacaaacaatattccaacgtaaccaagatattttcctatgatcctcactccc 5585456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 24794350 - 24794441
Alignment:
Q  138 ctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaa 229  Q
    |||||||| |||||| ||||||| || ||||||||||| ||||||||  |||| ||||||| ||||||||| ||| |||| ||||||||||||    
T  24794350 ctataccacaaacctactctatctaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaatct-cctaacccccaa 24794441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 36492912 - 36493055
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| |||||||| ||||| |||||| ||  | |||||||  ||||||||||||| |  || ||||||||||||||||||||||  |  || |||||     
T  36492912 ccaccaagaagaacctctccggcccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctataccataaactactcctctcaacc 36493011  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    ||||  | ||| ||||||||  ||||||| |||| |||||||||    
T  36493012 aacaaacgccaacaccatttgcctaataacgcaacattaaactc 36493055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 298
Target Start/End: Complemental strand, 4987627 - 4987441
Alignment:
Q  112 cctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctct 211  Q
    |||| |||||||| || || || || |||||||| ||||| || | ||| |||||||||||||| ||||||||  ||| ||| |||| |||||||||  |    
T  4987627 cctcgccataacgggcgactaaaactctataccaaaaaccacccccatccactaacatcctccaacaccatttccctagtaaggcaacattaaactcctt 4987528  T
Q  212 catctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcact 298  Q
    || ||  |||||||| || | ||||  ||||||    | |||||||   |||||||| |||||||| ||||||||||| ||||||||    
T  4987527 caactgtctaacccctaaccctccaaactccttctggagacaaacagagttccaacctatccaagacattttcctatgatcctcact 4987441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 27288657 - 27288747
Alignment:
Q  115 caccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaa 205  Q
    |||||||||| | | |||||||||||||||||||||||| | | |  || || |||||||| ||||||||| |||||||||  ||||||||    
T  27288657 caccataacgggtagccaacaccctataccataaacctcatatgttcaccaatatcctccaacaccattttcctaataaagatatattaaa 27288747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 208
Target Start/End: Complemental strand, 29721474 - 29721376
Alignment:
Q  110 ctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    |||||||||||| |  || ||||| ||||||||||| || || |||  |||||||||||||||||| ||||||||  |||| || |||| |||||||||    
T  29721474 ctcctcaccatatctcgccaccaaaaccctataccacaacccaccttgatcaactaacatcctccaacaccatttgcctaacaacgcaagattaaactc 29721376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 17700078 - 17700159
Alignment:
Q  132 aacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctca 213  Q
    |||||||||  ||| |||||||| ||||||||||||| || ||| ||||||||  | || |||||||| |||||||||||||    
T  17700078 aacaccctactccacaaacctcccctatcaactaacagccgccaacaccatttccccaacaaagcaatgttaaactctctca 17700159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 43249340 - 43249252
Alignment:
Q  138 ctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccc 226  Q
    |||||||| || ||| ||||||| || || |||||||| ||||||||  |||| ||||||| |||||||||||||| |  |||||||||    
T  43249340 ctataccacaaccctactctatctaccaatatcctccaacaccatttacctaacaaagcaaaattaaactctctcaacctcctaacccc 43249252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 4992269 - 4992175
Alignment:
Q  102 ctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcc-tctatcaactaacatcctccatcaccatttttctaataaagc 196  Q
    |||||||| ||||||||||| | ||||||||| ||||||||||| |||||||| ||| || | ||  | |||||| |||||||||||||| |||||    
T  4992269 ctccctacttcctcaccatacctagcaaccaagaccctatacca-aaacctccttctctccattagtaacctccaacaccatttttctaacaaagc 4992175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 11393884 - 11393793
Alignment:
Q  138 ctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 229  Q
    |||||||| |||||| ||||||| || |||| |||||| ||||||||  |||| || |||| ||||||||| ||||   |||||||||||||    
T  11393884 ctataccacaaacctactctatcgaccaacaacctccaacaccatttacctaacaatgcaaaattaaactccctcaatcacctaacccccaa 11393793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 42649750 - 42649821
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacac 136  Q
    |||||| | |||||||||||| |||||||| ||| |||||||  ||||||||||||| | ||| ||||||||    
T  42649750 ccaccacgtagaaccactccggcccccatctttcaacctcccgtcctcctcaccatatctagccaccaacac 42649821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 44082546 - 44082487
Alignment:
Q  140 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 199  Q
    |||||| || ||| |||||||||||||||||||||| ||||||||  ||| |||||||||    
T  44082546 ataccacaacccttctctatcaactaacatcctccaacaccatttacctagtaaagcaat 44082487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 37434477 - 37434391
Alignment:
Q  156 ctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctcc 242  Q
    ||||||||||||| || ||| ||||||||| | || |||||||| ||||||||||||| |  |||||| ||||| | ||||| ||||    
T  37434477 ctatcaactaacagccgccaacaccattttcccaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactcc 37434391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 207
Target Start/End: Complemental strand, 13879046 - 13878954
Alignment:
Q  115 caccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaact 207  Q
    ||||||| | ||| ||||||||||||  |||||| ||  ||||||||||||||| || ||| ||||||||  |||  |||||||| |||||||    
T  13879046 caccatacctagccaccaacaccctacgccataacccctctctatcaactaacaaccgccaacaccatttccctagcaaagcaatgttaaact 13878954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 25090982 - 25091066
Alignment:
Q  129 accaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctca 213  Q
    ||||||||||||  ||| || ||  ||||||||||||||| || | | ||||||||  |||| |||||||| |||||||||||||    
T  25090982 accaacaccctacgccacaacccctctctatcaactaacaaccgctaacaccatttccctaacaaagcaatgttaaactctctca 25091066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 299
Target Start/End: Complemental strand, 26262450 - 26262251
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 199  Q
    |||||||  |||||||||||||| ||||||  |||||||||||||| |||||| ||||||  |||||||||||||| ||||||||| |||| |||||| |    
T  26262450 acctcccatcctcctcaccataatgagcaagtaacaccctataccaaaaacctactctatttactaacatcctccaacaccattttcctaacaaagcagt 26262351  T
Q  200 attaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactc 299  Q
    ||||||||| |||||||  || | || ||| | | |||  |||||   ||||||||||  |||||||||||||  ||||||||||||||| || ||||||    
T  26262350 attaaactccctcatctctcttaacctcaacccttcatattcctttcttaaacaaacagctttccaaccaatcatagaaattttcctatgatcttcactc 26262251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 289
Target Start/End: Complemental strand, 26262996 - 26262816
Alignment:
Q  109 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    |||||||||||||||||||||| |||||||||||| | |||||| ||||||  ||||||||||||||  |||||||| |||| ||||||  |||||||||    
T  26262996 cctcctcaccataacgagcaactaacaccctatacaaaaaacctactctatttactaacatcctccaataccattttcctaacaaagcaggattaaactc 26262897  T
Q  209 tctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatg 289  Q
     ||||||| ||| |||| ||| | | ||   |||||   ||||||||||  ||||||| ||||| ||||||||||||||||    
T  26262896 cctcatctcccttaccctcaacccttcacattcctttcttaaacaaacaactttccaaacaatcaaagaaattttcctatg 26262816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 67 - 245
Target Start/End: Original strand, 380434 - 380612
Alignment:
Q  67 accatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaa 166  Q
    |||| |||||||||||||| |||||| ||| | |||||||| ||||||||||||| || ||  ||| |||||||||||| |||||  ||||||| || ||    
T  380434 accaagaagaaccactccggcccccaacctccaacctccctgcctcctcaccataccgcgcttccagcaccctataccagaaaccatctctatccaccaa 380533  T
Q  167 catcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctcctta 245  Q
    ||||| ||| ||||||||  ||| |||  || |||||||||| |||| || ||| |||||||||| ||||| |||||||    
T  380534 catccgccaacaccatttgcctagtaagacactattaaactccctcaactgcctgacccccaaacctccatactcctta 380612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 301
Target Start/End: Complemental strand, 26261885 - 26261690
Alignment:
Q  109 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaaca---tcctccatcaccatttttctaataaagcaatattaaa 205  Q
    |||| ||||| || |||||||| | |||||||||| | ||| ||  |||||| |||||||   |||| |||||||  ||| |||| |||||  | |||||    
T  26261885 cctcatcaccgtagcgagcaactagcaccctatacaaaaaatcttatctatccactaacaacatccttcatcaccgctttcctaacaaagcggtgttaaa 26261786  T
Q  206 ctctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    ||| ||||||| ||| |||||||| | ||||| ||| ||   |||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  26261785 ctccctcatctgccttacccccaaccatccatactcttttcttaaacaaacagttttccaaccaatccaagaaattttcctatgatcctcactccc 26261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 299
Target Start/End: Original strand, 35637710 - 35637899
Alignment:
Q  109 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    ||||||| ||||| |  |||||||||||| | ||||||||||||||||||||||| |||| |||||| ||||| ||| ||||||| |||| ||| |||||    
T  35637710 cctcctcgccatacctcgcaaccaacaccttgtaccataaacctcctctatcaaccaacaacctccaacaccactttcctaataatgcaaaatttaactc 35637809  T
Q  209 tctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactc 299  Q
     ||||  | ||| | |||||||| ||||||||||||   |||||||| | | |||||| | ||||| || ||||||||||  |||||||||    
T  35637810 cctcaattgcctca-ccccaaacctccatgctcctttcgtaaacaaatagtattccaagcgatccatgatattttcctattatcctcactc 35637899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 100 - 229
Target Start/End: Complemental strand, 26263560 - 26263431
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 199  Q
    |||| ||| |||||||||||||||||||||| |||||||||||| | ||||||   ||||  |||||||| ||||| ||||||||| |||| |||||| |    
T  26263560 accttccttcctcctcaccataacgagcaactaacaccctatacgaaaaacctatcctatttactaacattctccaacaccattttcctaacaaagcagt 26263461  T
Q  200 attaaactctctcatctacctaacccccaa 229  Q
    ||||||||| |||||||  || ||||||||    
T  26263460 attaaactccctcatctcacttacccccaa 26263431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 19838156 - 19838267
Alignment:
Q  73 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 172  Q
    ||||||||||| | |||| | || || |||||||| | |||||| |||||||||| | ||||||| ||||||| ||||||||| |||| |||||||||||    
T  19838156 aagaaccactctgtcccctaaccatcaacctccctgcatcctcatcataacgagctaacaacaccttataccacaaacctcctttatctactaacatcct 19838255  T
Q  173 ccatcaccattt 184  Q
    ||  ||||||||    
T  19838256 cctgcaccattt 19838267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 22094859 - 22094716
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| ||||||| ||| || |||||||||| | |||||||     |||| ||||||||||| || || || |||||||| ||||| || ||||| |||    
T  22094859 ccaccacgaagaacaacttcggcccccatcctccaacctcccacaaacctcgccataacgagcgactaaaactctataccaaaaaccacccctatccact 22094760  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    ||||||||||| ||||| ||  ||| ||||||||||||||||||    
T  22094759 aacatcctccaacaccacttccctagtaaagcaatattaaactc 22094716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 100 - 213
Target Start/End: Original strand, 23923452 - 23923564
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 199  Q
    ||||| || ||||||||||||| | |||| |||||||| ||||||| || || ||||| ||||||||||||||||||||||||||  |||| ||||  |     
T  23923452 acctctctgcctcctcaccatacctagcagccaacacc-tataccaaaacccacctctgtcaactaacatcctccatcaccatttccctaaaaaagataa 23923550  T
Q  200 attaaactctctca 213  Q
    ||||||||| ||||    
T  23923551 attaaactccctca 23923564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 301
Target Start/End: Original strand, 22437811 - 22437983
Alignment:
Q  129 accaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaaccccca 228  Q
    ||||||||||||||||| |||||  ||||||| |||||||||||||| | ||||||  |||| | ||| |||||| | ||| |||||  ||| ||||| |    
T  22437811 accaacaccctataccacaaaccatctctatctactaacatcctccagccccatttacctaaaagagctatattatattctatcatcctcctcaccccta 22437910  T
Q  229 aacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    ||| ||  | |||||||    ||||||||   ||||||| |||||| ||| |||||||||| |||||||||||    
T  22437911 aacctcattcctccttacgataacaaacaaaattccaactaatccatgaagttttcctatgatcctcactccc 22437983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 38358087 - 38358169
Alignment:
Q  154 ctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaaacttcca 236  Q
    |||||||||||||||||||||| ||||||||  ||| ||||||||||||||||||  || |||| |||||||||||||| ||||    
T  38358087 ctctatcaactaacatcctccaacaccatttacctagtaaagcaatattaaactccttcaatct-cctaacccccaaacctcca 38358169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 100 - 214
Target Start/End: Original strand, 476779 - 476893
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 199  Q
    |||||||| ||||||||||||| |  || |||| |||||||||||| |||||  ||||||| || ||||| | ||| ||||||||  |||| |||||| |    
T  476779 acctccctgcctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaagcact 476878  T
Q  200 attaaactctctcat 214  Q
    ||||||||| |||||    
T  476879 attaaactccctcat 476893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 31864835 - 31864884
Alignment:
Q  135 accctataccataaacctcctctatcaactaacatcctccatcaccattt 184  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  31864835 accctataccataagcctcctctatccactaacatcctccaacaccattt 31864884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 8299725 - 8299646
Alignment:
Q  131 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctc 210  Q
    ||||||||||  ||| |||||||| ||||||||||||| |||||| ||||||||  | || |||||||| ||||||||||    
T  8299725 caacaccctactccacaaacctcccctatcaactaacagcctccaacaccatttccccaacaaagcaatgttaaactctc 8299646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 10780798 - 10780880
Alignment:
Q  131 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctca 213  Q
    ||||||||||  ||| |||||||| ||||||||||||| || ||| ||||||||  | || |||||||| |||||||||||||    
T  10780798 caacaccctactccacaaacctcccctatcaactaacagccgccaacaccatttccccaacaaagcaatgttaaactctctca 10780880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 31864393 - 31864439
Alignment:
Q  138 ctataccataaacctcctctatcaactaacatcctccatcaccattt 184  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  31864393 ctataccataagcctcctctatccactaacatcctccaacaccattt 31864439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 301
Target Start/End: Original strand, 34481549 - 34481715
Alignment:
Q  135 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttc 234  Q
    ||||||||||| || || ||||| || || ||||||| ||| ||||||||  |||| ||||| || ||||||||  |||  | ||| ||||||||||  |    
T  34481549 accctataccacaacccacctctgtctaccaacatccgccaacaccatttccctaacaaagctatgttaaactccttcactttcctcacccccaaaccac 34481648  T
Q  235 catgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    ||| ||||||   |||||||||| ||| |||||  | ||||||||||||||| |  |||||||||||    
T  34481649 catactccttttttaaacaaacagtttgccaacttaaccaagaaattttcctgttatcctcactccc 34481715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 588099 - 588163
Alignment:
Q  126 gcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaa 190  Q
    ||||| |||||||||||||||||||| | ||||||||| | ||||||||| ||||| ||| ||||    
T  588099 gcaactaacaccctataccataaaccacatctatcaaccagcatcctccaacaccactttcctaa 588163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 305
Target Start/End: Complemental strand, 29572465 - 29572241
Alignment:
Q  81 ctccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacc 180  Q
    ||||| |||||| ||| | ||||| || ||||||||||||| | |||| |||||||||| ||||| || || | ||| |||||||||||| |||| || |    
T  29572465 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29572366  T
Q  181 atttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaat 280  Q
    ||||  |||| | ||  | ||||||||| || |  ||||||||||||| || ||||  ||||||    | |||||   | ||||||  |||||||  |||    
T  29572365 atttccctaaaagagataaattaaactcccttagttacctaacccccagacctccagactccttgttgagacaaatggtattccaattaatccaaagaat 29572266  T
Q  281 tttcctatgttcctcactccctccc 305  Q
    ||| ||||| |||||||||||||||    
T  29572265 ttttctatgatcctcactccctccc 29572241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 305
Target Start/End: Complemental strand, 29573842 - 29573618
Alignment:
Q  81 ctccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacc 180  Q
    ||||| |||||| ||| | ||||| || ||||||||||||| | |||| |||||||||| ||||| || || | ||| |||||||||||| |||| || |    
T  29573842 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29573743  T
Q  181 atttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaat 280  Q
    ||||  |||| | ||  | ||||||||| || |  ||||||||||||| || ||||  ||||||    | |||||   | ||||||  |||||||  |||    
T  29573742 atttccctaaaagagataaattaaactcccttagttacctaacccccagacctccagactccttgttgagacaaatggtattccaattaatccaaagaat 29573643  T
Q  281 tttcctatgttcctcactccctccc 305  Q
    ||| ||||| |||||||||||||||    
T  29573642 ttttctatgatcctcactccctccc 29573618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 305
Target Start/End: Complemental strand, 29575219 - 29574995
Alignment:
Q  81 ctccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacc 180  Q
    ||||| |||||| ||| | ||||| || ||||||||||||| | |||| |||||||||| ||||| || || | ||| |||||||||||| |||| || |    
T  29575219 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29575120  T
Q  181 atttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaat 280  Q
    ||||  |||| | ||  | ||||||||| || |  ||||||||||||| || ||||  ||||||    | |||||   | ||||||  |||||||  |||    
T  29575119 atttccctaaaagagataaattaaactcccttagttacctaacccccagacctccagactccttgttgagacaaatggtattccaattaatccaaagaat 29575020  T
Q  281 tttcctatgttcctcactccctccc 305  Q
    ||| ||||| |||||||||||||||    
T  29575019 ttttctatgatcctcactccctccc 29574995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 305
Target Start/End: Complemental strand, 29576596 - 29576372
Alignment:
Q  81 ctccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacc 180  Q
    ||||| |||||| ||| | ||||| || ||||||||||||| | |||| |||||||||| ||||| || || | ||| |||||||||||| |||| || |    
T  29576596 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29576497  T
Q  181 atttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaat 280  Q
    ||||  |||| | ||  | ||||||||| || |  ||||||||||||| || ||||  ||||||    | |||||   | ||||||  |||||||  |||    
T  29576496 atttccctaaaagagataaattaaactcccttagttacctaacccccagacctccagactccttgttgagacaaatggtattccaattaatccaaagaat 29576397  T
Q  281 tttcctatgttcctcactccctccc 305  Q
    ||| ||||| |||||||||||||||    
T  29576396 ttttctatgatcctcactccctccc 29576372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 305
Target Start/End: Complemental strand, 29577973 - 29577749
Alignment:
Q  81 ctccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacc 180  Q
    ||||| |||||| ||| | ||||| || ||||||||||||| | |||| |||||||||| ||||| || || | ||| |||||||||||| |||| || |    
T  29577973 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29577874  T
Q  181 atttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaat 280  Q
    ||||  |||| | ||  | ||||||||| || |  ||||||||||||| || ||||  ||||||    | |||||   | ||||||  |||||||  |||    
T  29577873 atttccctaaaagagataaattaaactcccttagttacctaacccccagacctccagactccttgttgagacaaatggtattccaattaatccaaagaat 29577774  T
Q  281 tttcctatgttcctcactccctccc 305  Q
    ||| ||||| |||||||||||||||    
T  29577773 ttttctatgatcctcactccctccc 29577749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 305
Target Start/End: Complemental strand, 29579350 - 29579126
Alignment:
Q  81 ctccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacc 180  Q
    ||||| |||||| ||| | ||||| || ||||||||||||| | |||| |||||||||| ||||| || || | ||| |||||||||||| |||| || |    
T  29579350 ctccggcccccaacctccaacctctctgcctcctcaccatacctagcagccaacaccctttaccaaaacccacatctgtcaactaacatcttccaacatc 29579251  T
Q  181 atttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaat 280  Q
    ||||  |||| | ||  | ||||||||| || |  ||||||||||||| || ||||  ||||||    | |||||   | ||||||  |||||||  |||    
T  29579250 atttccctaaaagagataaattaaactcccttagttacctaacccccagacctccagactccttgttgagacaaatggtattccaattaatccaaagaat 29579151  T
Q  281 tttcctatgttcctcactccctccc 305  Q
    ||| ||||| |||||||||||||||    
T  29579150 ttttctatgatcctcactccctccc 29579126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 41590627 - 41590711
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaa 149  Q
    |||||| |||||||| ||||| |||||| ||  | |||||||  ||||||||||||| |  || |||||||||||||||||||||    
T  41590627 ccaccaagaagaacctctccggcccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctataccataaa 41590711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 25856982 - 25856903
Alignment:
Q  131 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctc 210  Q
    ||||||||||  ||| |||||||| ||||||||||||| |||| | ||||||||  | || |||||||| ||||||||||    
T  25856982 caacaccctactccacaaacctcccctatcaactaacagcctctaacaccatttccccaacaaagcaatgttaaactctc 25856903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 33170286 - 33170337
Alignment:
Q  162 actaacatcctccatcaccatttttctaataaagcaatattaaactctctca 213  Q
    ||||||| |||||| ||||||||| |||| ||||||||||||||||| ||||    
T  33170286 actaacaacctccaacaccattttcctaacaaagcaatattaaactccctca 33170337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 4297918 - 4297833
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaac 150  Q
    |||||| |||||||| |||||  ||||| ||  | |||||||  ||||||||||||| |  || ||||||||||||||||||||||    
T  4297918 ccaccaagaagaacctctccgggccccaaccgccaacctcccatcctcctcaccatacctcgccaccaacaccctataccataaac 4297833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 35122240 - 35122151
Alignment:
Q  140 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 229  Q
    |||||| || ||| ||||||| |||||||||||||| ||||||||  ||| ||| |||| ||||||||  |||| |  ||||||||||||    
T  35122240 ataccacaatccttctctatccactaacatcctccaacaccatttccctagtaatgcaacattaaacttcctcaacctcctaacccccaa 35122151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 42928662 - 42928810
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcga-cctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaac 163  Q
    |||||| ||||||| |||||| |||||||||| | | ||||| | || || || |||| | ||| |||||||||||| |||||||| || | ||||| |     
T  42928662 ccaccacgaagaacaactccggcccccatcctccaaacctccat-ccgccacatcatacctagccaccaacaccctacaccataaagcttccctatctat 42928760  T
Q  164 taacatcctccatcaccatttttctaataaagcaatattaaactctctca 213  Q
    |||||  | ||| ||||| ||| | || ||||||||||||||||||||||    
T  42928761 taacaatcgccaacaccactttcccaacaaagcaatattaaactctctca 42928810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 27796065 - 27796157
Alignment:
Q  115 caccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaact 207  Q
    ||||||| | ||| ||||||||||||  |||||| ||  ||||||||||||||| || ||| ||||||||  |||  |||||||| |||||||    
T  27796065 caccatacctagccaccaacaccctacgccataacccctctctatcaactaacaaccgccaacaccatttccctagcaaagcaatgttaaact 27796157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 95 - 244
Target Start/End: Complemental strand, 27393528 - 27393379
Alignment:
Q  95 cttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaa 194  Q
    |||| |||||||| ||||||||||||| | ||||||||||||| ||||||||||||||||||||||||| |||| |||||| ||||| ||| |||| ||     
T  27393528 cttcaacctccctgcctcctcaccatacctagcaaccaacaccatataccataaacctcctctatcaaccaacaacctccaacaccactttcctaacaat 27393429  T
Q  195 gcaatattaaactctctcatctacctaacccccaaacttccatgctcctt 244  Q
    |||| ||||||||| | || || ||| ||||||||||  | |||||||||    
T  27393428 gcaagattaaactcccgcaacttcctcacccccaaaccacaatgctcctt 27393379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 228
Target Start/End: Original strand, 20987729 - 20987849
Alignment:
Q  108 acctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaact 207  Q
    |||||||||||||| ||||| ||||||||||||| |||||| ||| ||||||| || ||||||||||| ||||||||  |||| || ||| ||||||| |    
T  20987729 acctcctcaccataccgagccaccaacaccctatgccataacccttctctatccaccaacatcctccagcaccatttccctaacaacgcagtattaaatt 20987828  T
Q  208 ctctcatctacctaaccccca 228  Q
    | |||| || |||||||||||    
T  20987829 ccctcaactgcctaaccccca 20987849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 301
Target Start/End: Complemental strand, 32352849 - 32352683
Alignment:
Q  135 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttc 234  Q
    ||||||||||| ||||| |||||||| || ||||||| ||| ||||||||| |||| ||||| | |||||||||  |||  | ||| ||||||||||  |    
T  32352849 accctataccacaaaccacctctatccaccaacatccgccaacaccattttcctaacaaagctaaattaaactccttcaatttcctcacccccaaaccgc 32352750  T
Q  235 catgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    ||| ||||||   |||||||||| ||| |||||  | |||||||||||||||||  |||||||||||    
T  32352749 catactccttttttaaacaaacagtttgccaacttaaccaagaaattttcctattatcctcactccc 32352683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 33142778 - 33142658
Alignment:
Q  109 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    |||||||||| ||||| || ||||||||||||||||| || ||| ||||||||||||||| |||||| ||||||||  |||| | ||| | |||||| ||    
T  33142778 cctcctcaccgtaacgggccaccaacaccctataccacaagccttctctatcaactaacaacctccaacaccatttacctaagagagccaaattaaattc 33142679  T
Q  209 tctcatctacctaacccccaa 229  Q
    |||||||  ||| ||||||||    
T  33142678 tctcatcctcctcacccccaa 33142658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 197
Target Start/End: Original strand, 52692002 - 52692134
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| |||||| ||||||||||| |  ||  | |||||||  ||||||||||||| || || ||||||||||||||||| || ||  ||||||| ||     
T  52692002 ccaccaagaagaatcactccgaccctctaccaccaacctcccagcctcctcaccataccgcgccaccaacaccctataccagaacccctctctatccacc 52692101  T
Q  165 aacatcctccatcaccatttttctaataaagca 197  Q
    ||||||||||| ||||||||| |||||||||||    
T  52692102 aacatcctccaacaccattttcctaataaagca 52692134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 305
Target Start/End: Original strand, 38070363 - 38070602
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| | |||| |||||||||||||| ||| | ||| |||  ||||||||||||| |  || ||||| || |||||||| || ||||||||||| ||     
T  38070363 ccaccaagtagaaacactccgacccccaacctccaaccgcccagcctcctcaccataccttgccaccaaaactctataccacaaccctcctctatccacc 38070462  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttcc 264  Q
    |||| || ||| |||||||||  ||||||| |||||||||| ||  ||| ||  || | ||||||||  ||||  ||||||  |||||||||| |  |||    
T  38070463 aacaaccgccaacaccattttcttaataaaacaatattaaattcattcaactgtctca-ccccaaacccccatcttccttacgtaaacaaacagtgctcc 38070561  T
Q  265 aaccaatccaagaaattttcctatgttcctcactccctccc 305  Q
    || | ||||| ||||||||||| |  |||||||||||||||    
T  38070562 aagcgatccatgaaattttcctgttatcctcactccctccc 38070602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 65 - 300
Target Start/End: Complemental strand, 25504603 - 25504368
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| ||||||| |||| | |||||| ||| | |||||||   | |||| |||||||| || || || || |||||||| ||||| || ||||| |||    
T  25504603 ccaccaagaagaacaactctggcccccaacctccaacctcccacacacctcgccataacgggcgactaaaactctataccaaaaaccacccctatccact 25504504  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttcc 264  Q
    ||||||||||| ||||||||  ||| ||| ||||||||||||||  ||| ||  |||||||| || | ||||  ||||||    | |||||||    |||    
T  25504503 aacatcctccaacaccatttccctagtaaggcaatattaaactccatcaactgtctaacccctaaccctccaaactccttctggagacaaacagagctcc 25504404  T
Q  265 aaccaatccaagaaattttcctatgttcctcactcc 300  Q
    |||| |||||||| ||||||||||| ||||||||||    
T  25504403 aacctatccaagatattttcctatgatcctcactcc 25504368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 215
Target Start/End: Original strand, 21405368 - 21405518
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| |||||| ||||| | |||||| ||  | |||||||  |||||||||||||||| || ||||||||||||||||| | ||  ||  ||||||||    
T  21405368 ccaccacgaagaaacactctggcccccaaccaccaacctcccatcctcctcaccataacgtgctaccaacaccctataccacatactacccttatcaact 21405467  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatc 215  Q
    || | |||||| ||||||||| |||| | || || ||||||||| ||||||    
T  21405468 aataacctccaacaccattttcctaacagagaaacattaaactccctcatc 21405518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 100 - 305
Target Start/End: Complemental strand, 3544675 - 3544470
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 199  Q
    |||||||| ||||||||||||| |  || |||| |||||||||||| |||||  ||||||| || ||||| | ||| ||||||||  |||| ||| ||      
T  3544675 acctccctgcctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaaacaca 3544576  T
Q  200 attaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactc 299  Q
    ||||||||| |||| ||| || || ||||| | ||||| ||||||   ||||||||||   |||||| | | ||| ||||||||||| |  |||||||||    
T  3544575 attaaactccctcagctatctcactcccaaccctccatactccttttgtaaacaaacagagttccaagcgacccaggaaattttcctgttatcctcactc 3544476  T
Q  300 cctccc 305  Q
    ||||||    
T  3544475 cctccc 3544470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 13867394 - 13867302
Alignment:
Q  113 ctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaa 205  Q
    ||||||||| ||||| ||||  ||||||||||||||||| |||||||| || ||||||| ||| ||||||||  |||| |||||| |||||||    
T  13867394 ctcaccataccgagctaccaggaccctataccataaaccacctctatccaccaacatccgccaacaccatttacctaacaaagcactattaaa 13867302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 229
Target Start/End: Complemental strand, 22191391 - 22191227
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| |||||| ||||||| |||||| ||  | |||||||  |||||||||||||||  || ||||||||||||||||| | ||  ||  ||||||||    
T  22191391 ccaccacgaagaaacactccggcccccaaccaccaacctcccatcctcctcaccataacacgccaccaacaccctataccacatactacccttatcaact 22191292  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 229  Q
    || | |||||| ||||||||  |||| | || || ||||||||| ||||||  ||| ||||||||    
T  22191291 aataacctccaacaccatttacctaacagagaaacattaaactccctcatcctcctcacccccaa 22191227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 305
Target Start/End: Original strand, 45795854 - 45796046
Alignment:
Q  113 ctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc 212  Q
    ||||||||| || || ||||  ||| ||||||||||||| ||| |||| || ||||||| ||| ||||||||  |||| |||||| ||||||| ||   |    
T  45795854 ctcaccataccgtgctaccaggaccttataccataaaccacctttatccaccaacatccgccaacaccatttacctaacaaagcactattaaattcctgc 45795953  T
Q  213 atctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctccc 305  Q
    | || ||| |||||||| | ||||| |||||||  ||||||||||    ||||| ||| |||| ||| |||||| |  |||||||||||||||    
T  45795954 aacttcctcacccccaaccctccatactccttacgtaaacaaacagagctccaagcaacccaaaaaaatttcctgttatcctcactccctccc 45796046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 215
Target Start/End: Original strand, 3074276 - 3074426
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| |||||| |||||||  ||||| ||  | |||||||  |||||||||||||||| || ||||||||||||||||| | ||  ||| ||||  ||    
T  3074276 ccaccacgaagaaacactccggtccccaaccgccaacctcccatcctcctcaccataacgcgctaccaacaccctataccacatactacctttatcgtct 3074375  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatc 215  Q
    |  | |||||| ||||||||| |||| | || || ||||||||| ||||||    
T  3074376 agtaacctccaacaccattttcctaacagagaaacattaaactccctcatc 3074426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 28358435 - 28358540
Alignment:
Q  79 cactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatca 178  Q
    ||||||| |||||| ||| | |||||||| ||||||||||||| |  || ||||||||||| ||||| || || |||||||| || ||||  ||||| ||    
T  28358435 cactccggcccccaacctccaacctccctgcctcctcaccatatctcgccaccaacaccctgtaccaaaacccgcctctatctaccaacaatctccaaca 28358534  T
Q  179 ccattt 184  Q
    ||||||    
T  28358535 ccattt 28358540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 34853182 - 34853081
Alignment:
Q  140 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 239  Q
    |||||| |||||| |||||||||||||||||||||| ||   |||  ||| |||| ||| |||||||||| ||| || ||| |||| ||||| |||||||    
T  34853182 ataccacaaaccttctctatcaactaacatcctccaacaatgtttacctagtaaatcaacattaaactctttcagcttccttaccctcaaacctccatgc 34853083  T
Q  240 tc 241  Q
    ||    
T  34853082 tc 34853081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 208
Target Start/End: Complemental strand, 1248160 - 1248052
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 199  Q
    |||||||||||||||||||||| |  || ||||||| ||||||||| ||||| ||| |||| || || || | ||| ||| ||||  |||| |||||| |    
T  1248160 acctccctacctcctcaccatatctcgccaccaacagcctataccaaaaaccacctttatccaccaatatacaccaacactatttacctaacaaagcact 1248061  T
Q  200 attaaactc 208  Q
    |||||||||    
T  1248060 attaaactc 1248052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 295
Target Start/End: Original strand, 20796262 - 20796418
Alignment:
Q  139 tataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatg 238  Q
    ||||||| || ||| ||||||  || ||||||||||| ||||||||  |||| ||||||| ||||||||| |||| |  |||||||||||| | ||||      
T  20796262 tataccacaaccctactctatttaccaacatcctccaacaccatttacctaacaaagcaaaattaaactccctcaacctcctaacccccaatcctccaga 20796361  T
Q  239 ctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctc 295  Q
    |||||| |   |||| | | | |||||||| ||||||| |||||||| ||| |||||    
T  20796362 ctcctttggagaacacaaagtattccaacctatccaagtaattttccgatggtcctc 20796418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 25252234 - 25252182
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacct 152  Q
    |||||||| |||| ||| |||||||||| ||||||||||||||||| ||||||    
T  25252234 acctccctgcctcttcatcataacgagctaccaacaccctataccacaaacct 25252182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 19042671 - 19042737
Alignment:
Q  109 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctcca 175  Q
    |||||||||| ||||| || || |||||||||||||| || ||  |||||||||||||||| |||||    
T  19042671 cctcctcaccgtaacgggccactaacaccctataccacaacccctctctatcaactaacattctcca 19042737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 301
Target Start/End: Complemental strand, 7396239 - 7396095
Alignment:
Q  157 tatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaac 256  Q
    ||||||| ||||||||||| |||||  |  |||| ||||||  ||||||||| |||| ||  ||||||| ||| | ||||| |||||||   | ||| ||    
T  7396239 tatcaaccaacatcctccaacaccacatgcctaaaaaagcataattaaactccctcaactgtctaaccctcaaccctccatactccttatgcagacacac 7396140  T
Q  257 atttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    ||| | |||||| |||||| | ||||||||||| | |||||||||    
T  7396139 attatgccaacctatccaaaagattttcctatggttctcactccc 7396095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 9e-27; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 100 - 305
Target Start/End: Complemental strand, 1104521 - 1104316
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 199  Q
    ||||| || |||||||||||||||||||||||| |||||||||||| ||||| | |||||  |||||||  ||||| ||||||||  |||| |||||| |    
T  1104521 acctcactgcctcctcaccataacgagcaaccatcaccctataccacaaaccacatctatttactaacaaactccaacaccatttacctaacaaagcagt 1104422  T
Q  200 attaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactc 299  Q
     |||| ||| ||||||| ||||||||| || | ||||   |||||  ||  ||||||||||||||| |  |||||| ||||||| ||||  |||||||||    
T  1104421 gttaatctccctcatctgcctaaccccaaaccctccagaatcctttcctggacaaacatttttccagctgatccaaaaaattttgctattgtcctcactc 1104322  T
Q  300 cctccc 305  Q
    ||||||    
T  1104321 cctccc 1104316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 305
Target Start/End: Complemental strand, 15988072 - 15987879
Alignment:
Q  112 cctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctct 211  Q
    |||||||||| ||||| ||||| ||| | ||||||||||| | | || | ||||||||||| |||||  ||||  |||| |||||||| ||||||||  |    
T  15988072 cctcaccataccgagctaccaataccttgtaccataaaccccttttagccactaacatcctacatcataatttacctaacaaagcaatgttaaactccat 15987973  T
Q  212 catctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctccc 305  Q
    ||||| ||||||||| |||| || ||  ||||||   ||||| | ||| | |||||||||||||||||||||||||| || |||||||||||||    
T  15987972 catcttcctaacccctaaacctcaataatccttactcaaacatatattatgccaaccaatccaagaaattttcctatatttctcactccctccc 15987879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 305
Target Start/End: Original strand, 26514264 - 26514495
Alignment:
Q  74 agaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctc 173  Q
    |||||||||||| |||||| ||| | | |||||| ||||||||||||| ||||| |||||||| |||||||| || ||  ||||||| || | |||||||    
T  26514264 agaaccactccggcccccaacctccaaactccctgcctcctcaccataccgagccaccaacactctataccagaacccctctctatccaccagcatcctc 26514363  T
Q  174 catcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatcc 273  Q
    || ||||  ||  ||||||||||| ||||||| || || ||||  || |||||||| | ||||| ||||||   |||||| ||     ||||| ||||||    
T  26514364 caacacctattccctaataaagcactattaaattcccttatctgtctcacccccaaccctccatactcctttcgtaaacatactgagctccaagcaatcc 26514463  T
Q  274 aagaaattttcctatgttcctcactccctccc 305  Q
    | |||||||||||||  |||||||||||||||    
T  26514464 aggaaattttcctattatcctcactccctccc 26514495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 301
Target Start/End: Complemental strand, 503141 - 502905
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| ||||||| |||||| |||||||||| | |||||||   | |||| |||||||| || || || || ||||| || ||||| || ||||| |||    
T  503141 ccaccaagaagaacaactccggcccccatcctccaacctcccacacacctcgccataacgggcgactaaaactctatatcaaaaaccacccctatccact 503042  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttcc 264  Q
    ||||||||||| ||||||||  ||| ||| ||||||||||||||  ||| ||  |||||||| || | ||||  ||||||   || |||||||    |||    
T  503041 aacatcctccaacaccatttccctagtaaggcaatattaaactccttcaactgtctaacccctaaccctccaaactccttttgtagacaaacagagctcc 502942  T
Q  265 aaccaatccaagaaattttcctatgttcctcactccc 301  Q
    |||| |||||||| ||||||||||| |||||||||||    
T  502941 aacctatccaagacattttcctatgatcctcactccc 502905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 231
Target Start/End: Original strand, 29056050 - 29056216
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| |||||| ||||||| |||||| ||  | |||||||  |||||||||||||||| || ||||||||||||||||| | ||   || |||| |||    
T  29056050 ccaccacgaagaaacactccggcccccaaccgccaacctcccatcctcctcaccataacgtgctaccaacaccctataccacatactatctttatcgact 29056149  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaac 231  Q
    || | |||||| |||||||||||||| | || || ||||||||| ||||||  ||| ||||||||||    
T  29056150 aataacctccaacaccatttttctaacagagaaacattaaactccctcatcctcctcacccccaaac 29056216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 111 - 305
Target Start/End: Original strand, 15511195 - 15511388
Alignment:
Q  111 tcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctc 210  Q
    ||||| ||||| ||||| ||||||||| | |||||||||||   | || | |||||||||||  ||||  ||||  |||  |||||||  |||||||| |    
T  15511195 tcctcgccataccgagctaccaacaccttgtaccataaaccctttttagccactaacatcctatatcataatttacctac-aaagcaaagttaaactccc 15511293  T
Q  211 tcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccctccc 305  Q
    |||||| ||||||||| |||| |||||  |||||||  ||||| | ||| | |||||||||||||||||||||||||| || |||||||| ||||    
T  15511294 tcatcttcctaacccctaaacctccataatccttagtcaaacagatattatgccaaccaatccaagaaattttcctatatttctcactccgtccc 15511388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 10920038 - 10919957
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcacca 181  Q
    |||||||  ||||||||||||| | ||||||||||||||||||||| || || ||||||||||| ||||||||||| |||||    
T  10920038 acctccccgcctcctcaccatacctagcaaccaacaccctataccaaaacccccctctatcaaccaacatcctccaacacca 10919957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 229
Target Start/End: Original strand, 13086078 - 13086234
Alignment:
Q  73 aagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcct 172  Q
    |||||| |||||| |||||| ||| | |||||||| |  |||| |||||||| || || |  || |||||||| |||||| ||||||| || ||||||||    
T  13086078 aagaacaactccggcccccaacctccaacctccctccaacctcgccataacgggcgactagaacactataccacaaacctactctatctaccaacatcct 13086177  T
Q  173 ccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 229  Q
    ||| ||||||||  |||| ||||||| |||||||||  ||| || ||||||||||||    
T  13086178 ccaacaccatttacctaacaaagcaacattaaactccttcaacttcctaacccccaa 13086234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 244
Target Start/End: Original strand, 21549469 - 21549558
Alignment:
Q  155 tctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctc-atctacctaacccccaaacttccatgctcctt 244  Q
    ||||||||||||||||||||| ||||||||  ||| ||||||||||||||||||  || |||| ||| |||||||||| ||||||||||||    
T  21549469 tctatcaactaacatcctccaacaccatttacctagtaaagcaatattaaactccttcaatct-cctcacccccaaacctccatgctcctt 21549558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 303
Target Start/End: Original strand, 32186214 - 32186452
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| |||||| ||||||| |||||| ||| | |||||||  || |||||| ||| |  || ||||||||||||||||| || || |||||||| ||     
T  32186214 ccaccaagaagaagcactccggcccccaacctccaacctcccagccacctcactatatctcgccaccaacaccctataccaaaacccacctctatccacc 32186313  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttcc 264  Q
    |||| |  ||| |||||||| || || || || | |||||||||||| | || ||| |||||||  | | ||| ||||||| ||||||||| |    |||    
T  32186314 aacaactgccaacaccatttatccaacaaggctaaattaaactctctaaactgcctcacccccagcccttcatactccttacctaaacaaatagagctcc 32186413  T
Q  265 aaccaatccaagaaattttcctatgttcctcactccctc 303  Q
    || ||||||| ||||||||||| |  |||||||||||||    
T  32186414 aagcaatccaggaaattttcctgttatcctcactccctc 32186452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 100 - 197
Target Start/End: Original strand, 25350788 - 25350885
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagca 197  Q
    |||||||  ||||||||||||| || || ||||||||||||||||| || ||  ||||||| || |||||||||||  |||||||| |||||||||||    
T  25350788 acctcccagcctcctcaccataccgcgccaccaacaccctataccagaacccatctctatccaccaacatcctccaaaaccattttcctaataaagca 25350885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 28576005 - 28575925
Alignment:
Q  129 accaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctc 210  Q
    |||||||||||||||||||| || |||||||| |||||||||||||| || ||||||  ||||| ||| |||||||||||||    
T  28576005 accaacaccctataccataatcc-cctctatccactaacatcctccaacatcattttcttaatagagccatattaaactctc 28575925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 112 - 301
Target Start/End: Original strand, 33640495 - 33640684
Alignment:
Q  112 cctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctct 211  Q
    |||| |||||||| || || || || |||||||| ||||| || ||||| |||||||||||||| ||||||||  ||| ||| |||| |||||||||  |    
T  33640495 cctcgccataacgggcgactaaaactctataccaaaaaccacccctatccactaacatcctccaacaccatttccctagtaaggcaacattaaactcctt 33640594  T
Q  212 catctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    || ||  |||||||| || | ||||  ||||||    | |||||||   |||||||| |||||||| ||||||||||| |||||||||||    
T  33640595 caactgtctaacccctaaccctccaaactccttctggagacaaacagagttccaacctatccaagacattttcctatgatcctcactccc 33640684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 168
Target Start/End: Original strand, 18588880 - 18588983
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    ||||||| ||||||||   ||||||||||||| | |||||||  ||||||||||||| | ||| |||||||| | ||||||||| ||  |||||||||||    
T  18588880 ccaccataaagaaccaacacgacccccatcctccaacctcccgtcctcctcaccatatctagccaccaacactcgataccataacccgtctctatcaact 18588979  T
Q  165 aaca 168  Q
    ||||    
T  18588980 aaca 18588983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 297
Target Start/End: Original strand, 11469100 - 11469331
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcc-tcaccataacgagcaaccaacaccctataccataaacctcctctatcaac 163  Q
    |||||| ||||||| |||||| ||||| |||| | ||||||| |||| | |||||||| || || || ||||| | |||||| || ||| || |||| ||    
T  11469100 ccaccaagaagaacaactccg-cccccttcctccaacctccc-acctacgtcaccatatcgggcgactaacacacgataccacaacccttctttatctac 11469197  T
Q  164 taacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttc 263  Q
     ||||||||||| ||||||||  |||  || || |||||||||||| ||| || ||||||| ||| || ||||  |||||| |   |||||||| | ||     
T  11469198 caacatcctccaacaccatttacctagcaatgctatattaaactctttcaacttcctaaccgccagacctccaaactcctttgacgaacaaacaatattt 11469297  T
Q  264 caaccaatccaagaaattttcctatgttcctcac 297  Q
    ||||||||| ||| |||||||||||| |||||||    
T  11469298 caaccaatctaagtaattttcctatgatcctcac 11469331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 305
Target Start/End: Complemental strand, 14843711 - 14843506
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 199  Q
    ||||||||  |||||||||||| |  || |||| |||||||||||| |||||  ||||||| || ||||| | ||| ||||||||  |||| ||| || |    
T  14843711 acctccctgtctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctatctaccaacattcgccaacaccatttacctaacaaatcact 14843612  T
Q  200 attaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactc 299  Q
    ||||||||| |||| ||  || || ||||| | ||||| ||||||   ||||||||||   |||||| | | ||| ||||||||||| |  |||||||||    
T  14843611 attaaactccctcagctttctcactcccaaccctccatactccttttgtaaacaaacagagttccaagcgacccaggaaattttccttttatcctcactc 14843512  T
Q  300 cctccc 305  Q
    ||||||    
T  14843511 cctccc 14843506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 34180499 - 34180560
Alignment:
Q  109 cctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatc 170  Q
    ||||||||||||| | |||| |||||||||||||| | | ||||||||||||||||||||||    
T  34180499 cctcctcaccatatctagcagccaacaccctatacgaaagacctcctctatcaactaacatc 34180560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 12107194 - 12107091
Alignment:
Q  111 tcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctc 210  Q
    |||||| |||||||||  |||||||| |||||||| |||||   |||||| ||||||||  | || |||||||| ||||||| ||| | |||||||||||    
T  12107194 tcctcatcataacgagtcaccaacactctataccacaaaccatttctatctactaacatttttcaacaccatttctctaatagagccaaattaaactctc 12107095  T
Q  211 tcat 214  Q
    ||||    
T  12107094 tcat 12107091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 17577261 - 17577182
Alignment:
Q  131 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctc 210  Q
    ||||||||||  ||| |||||||| ||||||||||||| |||||| ||||||||  | || |||||||| ||||||||||    
T  17577261 caacaccctactccacaaacctcccctatcaactaacagcctccaacaccatttccccaacaaagcaatgttaaactctc 17577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 17605877 - 17605766
Alignment:
Q  131 caacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaa 230  Q
    ||||||||||  ||| |||||||| ||||||||||||| || ||| ||||||||  | || |||||||| ||||||||||||| |  |||||| |||||     
T  17605877 caacaccctactccacaaacctcccctatcaactaacagccaccaacaccatttccccaacaaagcaatgttaaactctctcaacctcctaacacccaac 17605778  T
Q  231 cttccatgctcc 242  Q
    | ||||| ||||    
T  17605777 cctccatactcc 17605766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 19256171 - 19256314
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    |||||| ||||||| |||| | |||||| ||| | |||||||   | |||| |||||||| || || || || |||||||| ||||| || ||||| |||    
T  19256171 ccaccaagaagaacaactctggcccccaacctccaacctcccacacacctcgccataacgggcgactaaaactctataccaaaaaccacccctatccact 19256270  T
Q  165 aacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    ||||||||||| ||||||||  ||| ||| |||| |||||||||    
T  19256271 aacatcctccaacaccatttccctagtaatgcaacattaaactc 19256314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 23065580 - 23065478
Alignment:
Q  140 ataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgc 239  Q
    |||||| |||||| ||||||||||||||| |||| | ||||||||  ||| |||| ||| |||||||||  ||| ||  |||||||| |||| |||||||    
T  23065580 ataccacaaaccttctctatcaactaacaacctctaacaccatttacctagtaaatcaacattaaactccttcaactttctaaccccgaaacctccatgc 23065481  T
Q  240 tcc 242  Q
    |||    
T  23065480 tcc 23065478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 10362664 - 10362749
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaac 150  Q
    |||||| |||||||||||||| |||||  ||| | |||||||  ||||||||||||| |  || ||||| ||||||||||||||||    
T  10362664 ccaccaagaagaaccactccggccccccacctccaacctcccatcctcctcaccatatctcgccaccaaaaccctataccataaac 10362749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 19350489 - 19350570
Alignment:
Q  79 cactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatc 160  Q
    ||||||| |||||| ||| | |||||||| ||||||||||||| |  || ||||||||||||||||| || || ||||||||    
T  19350489 cactccggcccccaacctccaacctccctgcctcctcaccatatctcgccaccaacaccctataccaaaacccacctctatc 19350570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 7956279 - 7956176
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    ||||||| ||||||||||||| || | ||||| | |||||||  ||||||||||||| | ||| |||||||| | |||||| | |||  |||||||||||    
T  7956279 ccaccataaagaaccactccggcctc-atcctccaacctcccgtcctcctcaccatatctagccaccaacactcgataccaaagaccatctctatcaact 7956181  T
Q  165 aacat 169  Q
    |||||    
T  7956180 aacat 7956176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 14551979 - 14552073
Alignment:
Q  110 ctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaacta-acatcctccatcaccatttttctaataaagcaatattaaa 205  Q
    |||||| |||||||||||||| |||||| ||||||| |||||  ||||||| |||| ||| |||||| ||||||||  |||||| ||||||||||||    
T  14551979 ctcctcgccataacgagcaac-aacaccttataccacaaaccctctctatccactagaca-cctccaacaccatttacctaatagagcaatattaaa 14552073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 301
Target Start/End: Original strand, 15674430 - 15674596
Alignment:
Q  135 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttc 234  Q
    ||||||||||| |||||  |||  || || ||||||| ||| ||||||||| |||| ||||| | |||||||||  |||  | ||  ||||||||||  |    
T  15674430 accctataccacaaaccatctcggtccaccaacatccgccaacaccattttcctaacaaagctaaattaaactccttcaatttccgcacccccaaaccgc 15674529  T
Q  235 catgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    ||| ||||||   |||||||||| ||| ||| |  | |||||||||||||||||  |||||||||||    
T  15674530 catactccttttttaaacaaacagtttgccagcttaaccaagaaattttcctattatcctcactccc 15674596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 29976596 - 29976522
Alignment:
Q  86 acccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatc 160  Q
    ||||||| ||| | |||||||| ||||||||||||| |  || ||||||||||||||||| || || ||||||||    
T  29976596 acccccaacctccaacctccctgcctcctcaccatatctcgccaccaacaccctataccaaaacccacctctatc 29976522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 23347006 - 23346933
Alignment:
Q  135 accctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactc 208  Q
    ||||||||||| ||||| |||||||| || | ||||| ||| ||||||||| |||| ||||| | |||||||||    
T  23347006 accctataccacaaaccacctctatccaccagcatccgccaacaccattttcctaacaaagctaaattaaactc 23346933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 284
Target Start/End: Original strand, 67608 - 67830
Alignment:
Q  62 ccaccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatca 161  Q
    ||||||||| |||||||||||||  |||||| ||| | |||||||| ||||||||||||| | || || ||||||||||||||| || |||||||| |||    
T  67608 ccaccaccaagaagaaccactccagcccccaacctccaacctccctgcctcctcaccatacctagaaatcaacaccctataccaaaaccctcctctgtca 67707  T
Q  162 actaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttt 261  Q
    | ||||| |||||| ||| | | | |||  |  || | |||||||||  | | || |||||||||||||| ||||| |||||| |  | ||||||| | |    
T  67708 attaacaacctccaacactactatcctagaagggctaaattaaactcatttaactgcctaacccccaaacctccatcctcctttgaaagacaaacaatgt 67807  T
Q  262 tccaaccaatccaagaaattttc 284  Q
    ||||||||||||||  |||||||    
T  67808 tccaaccaatccaatgaattttc 67830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 301
Target Start/End: Complemental strand, 4104 - 3929
Alignment:
Q  126 gcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaaccc 225  Q
    ||||| || ||||||||||| |||||  ||||||| || ||||||| ||| ||||||||  |||| | |||| ||||||||||  ||| ||  || ||||    
T  4104 gcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacagagcactattaaactccttcaactgtctcaccc 4005  T
Q  226 ccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    |||||| ||||| ||||||   | |||||| | ||||||| || |||||   |||||||||||| |||||||||||    
T  4004 ccaaacctccatactccttttttgaacaaatagttttccatcctatccagctaattttcctatgatcctcactccc 3929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 36081 - 36160
Alignment:
Q  111 tcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaa 190  Q
    ||||||||||||||||| |||||||| |||||||| |||||   |||||| |||| ||||||||| ||||||||| ||||    
T  36081 tcctcaccataacgagccaccaacactctataccacaaaccatttctatctactatcatcctccaacaccattttcctaa 36160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 301
Target Start/End: Complemental strand, 327683 - 327508
Alignment:
Q  126 gcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaaccc 225  Q
    ||||| || ||||||||||| |||||  ||||||| || ||||||| ||| ||||||||  |||| |||||| ||||||||||  ||| ||  || ||||    
T  327683 gcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccttcaactgtctcaccc 327584  T
Q  226 ccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    |||||| ||||| ||||||     |||||| | ||||||| || |||||   |||||||||||| |||||||||||    
T  327583 ccaaacctccatactcctttctggaacaaatagttttccatcctatccagctaattttcctatgatcctcactccc 327508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 301
Target Start/End: Complemental strand, 312229 - 312054
Alignment:
Q  126 gcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaaccc 225  Q
    ||||| || ||||||||||| |||||  ||||||| || ||||||| ||| ||||||||  |||| |||||| ||||||||||  ||| ||  || ||||    
T  312229 gcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccttcaactgtctcaccc 312130  T
Q  226 ccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    |||||| ||| | ||||||     |||||| | ||||||| || |||||   |||||||||||| |||||||||||    
T  312129 ccaaacctccgtactcctttctggaacaaatagttttccatcctatccagctaattttcctatgatcctcactccc 312054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 298
Target Start/End: Original strand, 164 - 308
Alignment:
Q  154 ctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaaacttccatgctccttagctaaaca 253  Q
    ||||||| ||||||| |||||| ||||||||  |||| |||||||| ||||||||||||| |  |||||| ||||| | ||||| |||| |    |||||    
T  164 ctctatctactaacaacctccaacaccatttccctaacaaagcaatgttaaactctctcaacctcctaacacccaaccctccatactccctcctcaaaca 263  T
Q  254 aacatttttccaaccaatccaagaaattttcctatgttcctcact 298  Q
     | |   ||||||||||||||||||||||| || | |||||||||    
T  264 caaagaattccaaccaatccaagaaatttttcttttttcctcact 308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 301
Target Start/End: Complemental strand, 134402 - 134227
Alignment:
Q  126 gcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaaccc 225  Q
    ||||| || ||||||||||| |||||  ||||||| || ||||||| ||| ||||||||  |||| |||||| ||||||||||  ||| ||  || ||||    
T  134402 gcaactaaaaccctataccacaaaccatctctatccaccaacatccgccaacaccatttccctaacaaagcactattaaactccttcaactgtctcaccc 134303  T
Q  226 ccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactccc 301  Q
    |||||| ||| | ||||||     |||||| | ||||||| || |||||   |||||||||||| |||||||||||    
T  134302 ccaaacctccgtactcctttctggaacaaatagttttccatcctatccagctaattttcctatgatcctcactccc 134227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 6619 - 6729
Alignment:
Q  65 ccaccatgaagaaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaact 164  Q
    ||||||||| ||| ||||||  |||||| ||| | |||||||| ||||||||||||| |  || || || ||||||||||| ||||| ||||  || ||     
T  6619 ccaccatgatgaagcactccagcccccaacctccaacctccctgcctcctcaccatatctcgccactaaaaccctataccacaaaccgcctcgctctacc 6718  T
Q  165 aacatcctcca 175  Q
    |||||||||||    
T  6719 aacatcctcca 6729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 305
Target Start/End: Complemental strand, 34183 - 33978
Alignment:
Q  100 acctccctacctcctcaccataacgagcaaccaacaccctataccataaacctcctctatcaactaacatcctccatcaccatttttctaataaagcaat 199  Q
    ||||||||  |||||||||||| |  || |||| |||||||||||| |||||  |||| || || ||||| | ||| |||| |||  |||| |||||| |    
T  34183 acctccctgtctcctcaccatatctcgctaccagcaccctataccaaaaaccatctctctctaccaacattcgccaacaccttttacctaacaaagcact 34084  T
Q  200 attaaactctctcatctacctaacccccaaacttccatgctccttagctaaacaaacatttttccaaccaatccaagaaattttcctatgttcctcactc 299  Q
    ||||||||| |||| ||  || || ||||| | ||||| ||||||   ||||||||||   |||||| | | | | ||||||||||| |  |||||||||    
T  34083 attaaactccctcagctgtctcactcccaaccctccatactccttttgtaaacaaacagagttccaagcgacctaggaaattttcctgttatcctcactc 33984  T
Q  300 cctccc 305  Q
    ||||||    
T  33983 cctccc 33978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 145
Target Start/End: Complemental strand, 86799 - 86730
Alignment:
Q  76 aaccactccgacccccatccttcgacctccctacctcctcaccataacgagcaaccaacaccctatacca 145  Q
    |||||||| |||||||||||| | |||||||   |||||||||||| | |||||||||||| | ||||||    
T  86799 aaccactctgacccccatcctccaacctcccacactcctcaccatatctagcaaccaacactcgatacca 86730  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 3096 - 3024
Alignment:
Q  157 tatcaactaacatcctccatcaccatttttctaataaagcaatattaaactctctcatctacctaacccccaa 229  Q
    ||||||| | ||||||||| ||||||||  ||||||||| || ||||||  |||||| || ||||||||||||    
T  3096 tatcaaccaccatcctccaacaccatttacctaataaagaaaaattaaaagctctcaactgcctaacccccaa 3024  T

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