View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20113_high_7 (Length: 247)
Name: NF20113_high_7
Description: NF20113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20113_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 15 - 229
Target Start/End: Original strand, 40954345 - 40954559
Alignment:
| Q |
15 |
cagagagcagctgagtggggtttggtgctcagaacagacgctgaaaccgggaaaccacaaggagtgggagttagaaactccggtgacgatgaacagaatg |
114 |
Q |
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| T |
40954345 |
cagagagcagctgagtggggtttggtgctcagaacagacgctgaaaccgggaaaccacaaggagtgggagttagaaactccggtgacgatgaacagaatg |
40954444 |
T |
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| Q |
115 |
gcaagttctccggcaaaaggaattccaataactccggcagagtttccggtgactcttccgacggtggtgatcctcgcgggtttccgagagtttcagagga |
214 |
Q |
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| T |
40954445 |
gcaagttctccggcaaaaggaattccaataactccggcagagtttccggtgactcttccgacggtggtgatcctcgcgggtttccgagagtttcagagga |
40954544 |
T |
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| Q |
215 |
tttgaaagatgcttt |
229 |
Q |
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| T |
40954545 |
tttgaaagatgcttt |
40954559 |
T |
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