View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20115_low_1 (Length: 639)
Name: NF20115_low_1
Description: NF20115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20115_low_1 |
 | |
|
| [»] scaffold0070 (2 HSPs) |
| | |
|
| [»] scaffold0830 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 441; Significance: 0; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 18 - 630
Target Start/End: Complemental strand, 5119519 - 5118907
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
5119519 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccatgatgaagatactccaatgcagatgc |
5119420 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
5119419 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtataaccatctttccacacttccatttgacataaactccatcact |
5119320 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| ||||| ||||||| ||| |||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
5119319 |
agagatttgaaatcaggatttgaacaactactcataatttgaactagatttctatgtcgaaggttgcgcattgcattgcattctgcatcaaagcttcttg |
5119220 |
T |
|
| Q |
318 |
atgctgcttccattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagtaa |
417 |
Q |
| |
|
||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||||||| ||||| ||||||||||| |
|
|
| T |
5119219 |
atgcttctgccattgtcaagtcaagtactttaattgctatcatcttcccactagaaagcattccattatacacggatccaaaaccacctcttccaagtaa |
5119120 |
T |
|
| Q |
418 |
tttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaagtggattttca |
517 |
Q |
| |
|
||||| ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| || |||||||| ||| ||||||||| | ||| |
|
|
| T |
5119119 |
attactgtcactgaatccattagttgcttgcacaagttcataataggaaatccttcttggaactcctagagcggataaactcctctcaagtggactgtca |
5119020 |
T |
|
| Q |
518 |
acatttctccttttatgaatctgaagtattatggatgcaacaaccaaaatgcctaacacaacaattatggatgatatgcatatgattgatagcatctttg |
617 |
Q |
| |
|
|| ||| |||||||||| || ||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| |||||||| ||| |||||||| |
|
|
| T |
5119019 |
acctttttccttttatgcattcgaagtattatgcatgcaacaaccaaaatgcctagcacagcaattatggatgatatcaatatgattaataacatctttg |
5118920 |
T |
|
| Q |
618 |
actttttcctatg |
630 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
5118919 |
attttttcctatg |
5118907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 18 - 630
Target Start/End: Complemental strand, 5101960 - 5101348
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||| ||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||| |
|
|
| T |
5101960 |
gtgcaatcatattttcatccaataacacattagcaggcttcaagtcacaatgaaccactggtattaaagaaccatgatggagatactccaatgctgatgc |
5101861 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
5101860 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtataaccatctttccacacttccatttgacataaactccatcact |
5101761 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| ||||| ||||||| ||| |||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
5101760 |
agagatttgaaatcaggatttgaacaactactcataatttgaactagatttctatgtcgaaggttgcgcattgcattgcattctgcatcaaagcttcttg |
5101661 |
T |
|
| Q |
318 |
atgctgcttccattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagtaa |
417 |
Q |
| |
|
||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
5101660 |
atgcttctgccattgtcaagtcaagtactttaattgctatcatcttcccactagaaagcattccttgatacacggatccaaagccaccccttccaagtaa |
5101561 |
T |
|
| Q |
418 |
tttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaagtggattttca |
517 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | |
|
|
| T |
5101560 |
attactctcactgaatccattagttgcttgcactagttcataataggaaatcctttttggaactcctatagtgtgtaaacccctttcaagtgaattttta |
5101461 |
T |
|
| Q |
518 |
acatttctccttttatgaatctgaagtattatggatgcaacaaccaaaatgcctaacacaacaattatggatgatatgcatatgattgatagcatctttg |
617 |
Q |
| |
|
| |||||||||||||| || ||||||||||| |||||||||||||||| | || ||||||||||||||||||||| |||||||| ||| |||||||| |
|
|
| T |
5101460 |
ccctttctccttttatgcattcgaagtattatgcatgcaacaaccaaaatacatagcacaacaattatggatgatatcaatatgattaataacatctttg |
5101361 |
T |
|
| Q |
618 |
actttttcctatg |
630 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5101360 |
actttttcctatg |
5101348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 18 - 617
Target Start/End: Original strand, 5080014 - 5080616
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
5080014 |
gtgcaaccatattttcatccagtaacacattgctaggcttcaaatcacaatgaaccactggtattgaagaaccatgatgaagatactccaatgcagatgc |
5080113 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
||||||||||||||| |||| |||||||||||| | |||||||||||||||| ||| ||||||||||||| |||||||||||||| |||||||| || |
|
|
| T |
5080114 |
cacatctatcattatagtcaatctttgcaagaaacctaaaaaatagttatcagtgtataaccatttttccaagcttccatttgacattaactccattacc |
5080213 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| ||| |||||| | |||||||||||| |||| |||| ||| ||||||||||||||||| |||| ||| ||||| |||||||||| ||||||| ||| |
|
|
| T |
5080214 |
aaagacctgaaattaacatttgaacaactggtgatgatctcaacaagatttcgatgccgaagattgcgcatagcattgcattctgcattaaagctttttg |
5080313 |
T |
|
| Q |
318 |
atgctgcttccattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagtaa |
417 |
Q |
| |
|
|| |||||||| | |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||| |
|
|
| T |
5080314 |
ttgttgcttccaatttcaagtcaagtactttaattgctaccatcttcccactagaaagcattccttgatacacagatccaaagccaccctttcctagtaa |
5080413 |
T |
|
| Q |
418 |
tttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactccta---tagtggataaacccctttcaagtggattt |
514 |
Q |
| |
|
||| ||||||| ||||||||||||||||| || |||||| ||||||||||||||||| || |||| | || |||||| | |||||||||||||| |
|
|
| T |
5080414 |
attagtctcactaaatccattagttgcttgcacaagttcagaataggaaatcctttttaaaagccctaaatttgttgataaatctttttcaagtggattt |
5080513 |
T |
|
| Q |
515 |
tcaacatttctccttttatgaatctgaagtattatggatgcaacaaccaaaatgcctaacacaacaattatggatgatatgcatatgattgatagcatct |
614 |
Q |
| |
|
||||| | | || |||| || || ||||||| |||| |||||| | |||||||||| |||||||||||||||||||||||||||| ||| ||| ||||| |
|
|
| T |
5080514 |
tcaacttctttctttttgtgcatttgaagtactatgcatgcaatagccaaaatgcccaacacaacaattatggatgatatgcatacaattaataacatct |
5080613 |
T |
|
| Q |
615 |
ttg |
617 |
Q |
| |
|
||| |
|
|
| T |
5080614 |
ttg |
5080616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 405; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 18 - 622
Target Start/End: Original strand, 14412325 - 14412929
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||| |||| ||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
14412325 |
gtgcaatcatagcttcatctagtaacacattactaggcttcaagtcacaatgaaccactggtattgaagaaccatgatggagatactccaatgcagatgc |
14412424 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
14412425 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaattgttattagagtataaccatttttccaaacttccgtttgacataaactccatcact |
14412524 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || |||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
14412525 |
agagatttgaaatcaggatttgaacaactactgataatttggacgagatttctatgccggaggttgcgcattgcattgcattctgcatcaaagcttcttg |
14412624 |
T |
|
| Q |
318 |
atgctgcttccattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagtaa |
417 |
Q |
| |
|
| | ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||| ||||||||||||||||| |
|
|
| T |
14412625 |
aagtagcttccattgttaagtcaagtactttaactgctatcatcttcccaatagaaagcattcctttatacactgatccaaaaccaccccttccaagtaa |
14412724 |
T |
|
| Q |
418 |
tttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaagtggattttca |
517 |
Q |
| |
|
||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||| ||||| |
|
|
| T |
14412725 |
attagtctcgctgaatccattagttgcttggacgagttcataataggaaatccttattggaactcctacagtggataaacccctttcacgtggactttca |
14412824 |
T |
|
| Q |
518 |
acatttctccttttatgaatctgaagtattatggatgcaacaaccaaaatgcctaacacaacaattatggatgatatgcatatgattgatagcatctttg |
617 |
Q |
| |
|
|| ||| |||||||||| || ||||| ||| | ||||||||| | |||||| |||||| |||||||| ||||||| |||||||| |||||||||||| |
|
|
| T |
14412825 |
acctttttccttttatgcatttgaagcattgtacatgcaacaataataatgcccaacacagcaattatgagtgatatggatatgattaatagcatctttg |
14412924 |
T |
|
| Q |
618 |
acttt |
622 |
Q |
| |
|
|||| |
|
|
| T |
14412925 |
tcttt |
14412929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 18 - 578
Target Start/End: Complemental strand, 16886241 - 16885678
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
16886241 |
gtgcaaccatattttcatctagtaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccatgatggagatactccaatgcagatgc |
16886142 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||| |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
16886141 |
aacatctatcattatattcaacctttgcaagaaatctaaacaatagttatccgagtataaccatttttcaacacttccatttgacataaactccatcacc |
16886042 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| || |||||||| |||||||||||| | |||| || ||| ||||||||||| ||||| ||| ||||||||| |||||||| ||||| ||||||| |
|
|
| T |
16886041 |
aatgacttgaaatctttatttgaacaacttgtaataacctcaacaagatttcgatgtcgaagaatgcgcattgcattgcattctgcgtcaaaacttcttg |
16885942 |
T |
|
| Q |
318 |
atgctgcttccattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagtaa |
417 |
Q |
| |
|
||| ||||||||| |||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||||||||| || || || ||| |||||||||| |
|
|
| T |
16885941 |
atgttgcttccatattcaagtcaagtactttaattgctaccatcttcccggtagaaagcattccctgatacacagagccgaagcccccctttccaagtaa |
16885842 |
T |
|
| Q |
418 |
tttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactccta---tagtggataaacccctttcaagtggattt |
514 |
Q |
| |
|
|||||||| || ||||||||||||||||| || ||||||||||| ||||||||| ||||||| |||| ||| ||||||||| |||||||||||||| |
|
|
| T |
16885841 |
gttactctcgctaaatccattagttgcttgcacaagttcataatatgaaatccttcttggaacccctaaatcagttgataaacccatttcaagtggattt |
16885742 |
T |
|
| Q |
515 |
tcaacatttctccttttatgaatctgaagtattatggatgcaacaaccaaaatgcctaacacaa |
578 |
Q |
| |
|
||||| ||| || ||||||| || |||| |||||| || |||||||||||| ||| ||||| |
|
|
| T |
16885741 |
tcaacttttttctttttatgcattagaagaattatgcataggacaaccaaaatggctatcacaa |
16885678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 173; Significance: 1e-92; HSPs: 18)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 18 - 523
Target Start/End: Original strand, 23258468 - 23258961
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| |||||||| ||| |||||| ||| || | ||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
23258468 |
gtgcaaccatattttcatccaacaagacattagaaggttttagatcgcaatgaaccacgggtattgaagaaccatgatggagatattccaatgcagatgc |
23258567 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||| || |||||||||||||||| || ||| |||||| || || |||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
23258568 |
aacatctatcattatatttaacctttgcaagaaatttaagcaatggttatctgaatataaccatttgtccacacttccatttgacatgaactccatcacc |
23258667 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| |||||||||||| |||| |||||||| |||||||||| ||| |||||||||||||| || || | ||||||||| ||||||||||||||||| ||| |
|
|
| T |
23258668 |
aatgatttgaaatcaagattggaacaactgctgataatcttaaccagatttcgatgccgtagatttctcattgcattgcattctgcatcaaagctctttg |
23258767 |
T |
|
| Q |
318 |
atgctgcttccattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagtaa |
417 |
Q |
| |
|
|| ||| |||| |||||||||||| ||||||| ||| || |||| | |||||||||||||| ||||| || ||| |||||||||| |
|
|
| T |
23258768 |
------------tttgcaaatcaaatactttaactgcaatcatctcaccatcaggaagcttcccttgatacacagagccaaagccccccgttccaagtaa |
23258855 |
T |
|
| Q |
418 |
tttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaagtggattttca |
517 |
Q |
| |
|
|| |||||| |||||||||| |||||||| || ||||||||||| || || ||| |||||||||||| || |||||||||||||||| ||||||| |
|
|
| T |
23258856 |
attgctctcattgaatccatttgttgcttgcacaagttcataatatgatattcttcttggaactcctaaggttgataaacccctttcaacaatattttca |
23258955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 18 - 533
Target Start/End: Original strand, 25695624 - 25696139
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| |||||||| ||| ||||| |||||| | |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |
|
|
| T |
25695624 |
gtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccactggtattgaggaaccatgatggagatattccaatgcagatgc |
25695723 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||| || ||||||||||||||| | | ||||||||| || || |||||||| || ||||||||||||||||| ||||||||||| |
|
|
| T |
25695724 |
aacatctatcattatatttaacctttgcaagaaacttagacaatagttatttgaatataaccatttgtctacacttccatttgacatgaactccatcacc |
25695823 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| |||||||||||| ||||||| ||||| |||||||||| || ||||||||||| || || || | ||| ||||| ||||||||||||||||| ||| |
|
|
| T |
25695824 |
aatgatttgaaatcaagatttgagcaactgctgataatctttaccagatttcgatgtcgtagatttctcatcgcattgcattctgcatcaaagctctttg |
25695923 |
T |
|
| Q |
318 |
atgctgcttc-cattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagta |
416 |
Q |
| |
|
|| ||| || |||| ||| |||| ||||||||| || ||||||| ||| | |||| | || ||||| ||||| |||||||| ||||||||||| | |
|
|
| T |
25695924 |
attttgcctctgattg-caaatcaattactttaacggcaatcatctcaccatcaagaagcttcccctgataaacagagccaaatcccccccttccaagga |
25696022 |
T |
|
| Q |
417 |
atttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaagtggattttc |
516 |
Q |
| |
|
| ||||||||| ||||||||||||||||||| || |||||||||||||| || ||| ||||| |||| | ||| || |||||||||||||| | |||||| |
|
|
| T |
25696023 |
aattactctcattgaatccattagttgcttgcacaagttcataataggatattcttcttggagctcccaaagttgacaaacccctttcaagagtattttc |
25696122 |
T |
|
| Q |
517 |
aacatttctccttttat |
533 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
25696123 |
attctttctccttttat |
25696139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 18 - 507
Target Start/End: Original strand, 25647276 - 25647765
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| |||||||| ||| ||||| |||||| | ||| || ||||||||||||||||| ||||| ||||||||||| |||||| | ||||| |
|
|
| T |
25647276 |
gtgcaaccatattttcatccaacaagacatttgaaggctttagatctcattgaaccactggtattgatgaaccatgatggagatattccaattctgatgc |
25647375 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||| || |||||||||||||||| | | ||||||||| || || |||||||| || ||||||||||||||||| ||||||||||| |
|
|
| T |
25647376 |
aacatctatcattatatttaacctttgcaagaaatttagacaatagttatttgaatataaccatttgtctacacttccatttgacatgaactccatcacc |
25647475 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| |||||||||||| ||||||| ||||| |||||||||| || ||||||||||| || || || | ||||||||||||||||||||||||||| ||| |
|
|
| T |
25647476 |
aatgatttgaaatcaagatttgatcaacttctgataatctttaccagatttcgatgtcgtagatttctcattgcattacattctgcatcaaagctctttg |
25647575 |
T |
|
| Q |
318 |
atgctgcttc-cattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagta |
416 |
Q |
| |
|
|| ||| || ||||| || |||| |||||||||||| ||||||| ||| | |||| | || ||||| |||||||||||| | ||||||||||| | |
|
|
| T |
25647576 |
attttgcctctgattgt-aaatcaattactttaactgcaatcatctcaccatcaagaagcttcccctgataaacagatccaaatgctccccttccaagga |
25647674 |
T |
|
| Q |
417 |
atttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaag |
507 |
Q |
| |
|
| ||||||||| ||||||||||||||||||| || |||||||||||||| || ||| ||||| |||||| ||| || |||||||||||||| |
|
|
| T |
25647675 |
aattactctcattgaatccattagttgcttgcacaagttcataataggatattcttcttggagctcctaaagttgacaaacccctttcaag |
25647765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 18 - 507
Target Start/End: Original strand, 25715457 - 25715946
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| |||||||| ||| ||||| |||||| | |||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
25715457 |
gtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccactggtattgaagaaccacgatggagatattccaatgcagatgc |
25715556 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||| || ||||||||||||||| | | |||| |||| || || ||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
25715557 |
aacatctatcattatatttaacctttgcaagaaacttagacaatatttatttgaatataaccatttttctacacttccatttgacatgaactccatcacc |
25715656 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| |||||||||||| ||||||| ||||| |||||||||| || ||||| ||||| || || || | ||| ||||| ||||||||||||||||| ||| |
|
|
| T |
25715657 |
aatgatttgaaatcaagatttgagcaacttctgataatctttaccagattccgatgtcgtagatttctcatcgcattgcattctgcatcaaagctctttg |
25715756 |
T |
|
| Q |
318 |
atgctgcttc-cattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagta |
416 |
Q |
| |
|
|| ||| || |||| ||| |||| |||||| ||||| ||||||| ||| | |||| |||||||||| ||||| |||||||| ||||||||||| | |
|
|
| T |
25715757 |
attttgcctctgattg-caaatcaattacttttactgcaatcatctcaccatcatgaagctttccttgataaacagagccaaatcccccccttccaagga |
25715855 |
T |
|
| Q |
417 |
atttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaag |
507 |
Q |
| |
|
| ||||||||| ||||||||||||||||||| || | |||||||||||| || ||| ||||| |||||| ||| || |||||||||||||| |
|
|
| T |
25715856 |
aattactctcattgaatccattagttgcttgcacaatttcataataggatattcttcttggagctcctaaagttgaaaaacccctttcaag |
25715946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 18 - 533
Target Start/End: Original strand, 25322920 - 25323435
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| || ||||| || ||||| |||||| | ||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
25322920 |
gtgcaaccatatttttatccaataagacattggaaggctttagatcacaatgaaccacaggtattgaagaaccatgatgaagatattccaatgcagatgc |
25323019 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||| || |||||||| ||||||| | | ||||||||| || || |||||||| || ||||||||||||||||| ||||||||||| |
|
|
| T |
25323020 |
aacatctatcattatatttaacctttgtaagaaatttagacaatagttatttgaatataaccatttgtcaacacttccatttgacatgaactccatcacc |
25323119 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| |||||||||||| ||||||| |||||||||||||||| || ||||||||||| || || || | ||||||||| |||||| |||||||||| ||| |
|
|
| T |
25323120 |
aatgatttgaaatcaagatttgagcaactactgataatctttaccagatttcgatgtcgtagatttctcattgcattgcattctacatcaaagctctttg |
25323219 |
T |
|
| Q |
318 |
atgctgcttc-cattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagta |
416 |
Q |
| |
|
|| ||| || |||| ||| |||| |||||||||||| ||||||| ||| | |||| |||| ||||| ||||| |||||||| ||||||||||| | |
|
|
| T |
25323220 |
attttgcctctgattg-caaatcaattactttaactgcaatcatctcaccatcaagaagctttccctgataaacagagccaaatcccccccttccaagga |
25323318 |
T |
|
| Q |
417 |
atttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaagtggattttc |
516 |
Q |
| |
|
| ||||||||| | ||||||||||||||||| | ||||||||||| || || ||| ||||| |||||| ||| || |||||||||||||| | |||||| |
|
|
| T |
25323319 |
aattactctcatttaatccattagttgcttgcaaaagttcataatatgatattcttcttggagctcctaaagttgacaaacccctttcaagagtattttc |
25323418 |
T |
|
| Q |
517 |
aacatttctccttttat |
533 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
25323419 |
attctttctccttttat |
25323435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 18 - 507
Target Start/End: Original strand, 25341244 - 25341733
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| |||||||| || |||||| |||||| | ||| |||||||||||||||| ||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
25341244 |
gtgcaaccatattttcatccaataagacattagaaggctttagatcgcaatgaaccactggtactgaagaaccatgatggagatattccaatgcagatgc |
25341343 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||| || |||||||||||||||| | ||| ||||| || || ||||| || || ||||||||||||||||| ||||||||||| |
|
|
| T |
25341344 |
aacatctatcattatatttaacctttgcaagaaatttattcaattgttatttgaatataaccaattgtctacacttccatttgacatgaactccatcacc |
25341443 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| |||||||||||| ||||||||||||| |||||||||| ||| | ||||||||| || || || | ||||||||| ||||||||||||||||| ||| |
|
|
| T |
25341444 |
aatgatttgaaatcaagatttgaacaactgctgataatcttaaccatatttcgatgtcgtagatttctcattgcattgcattctgcatcaaagctctttg |
25341543 |
T |
|
| Q |
318 |
atgctgcttc-cattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagta |
416 |
Q |
| |
|
|| ||| || |||| ||| |||| ||||||||| || ||||||| ||| | |||| | || ||||| ||||| |||||||| ||||||||||| | |
|
|
| T |
25341544 |
attttgcctctgattg-caaatcaattactttaacggcaatcatctcaccatcaagaagcttgccctgataaacagagccaaatcccccccttccaagga |
25341642 |
T |
|
| Q |
417 |
atttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaag |
507 |
Q |
| |
|
| ||||||||| ||||||||||||||||||| || | |||||||||||| || ||| ||||| |||| | ||| || |||||||||||||| |
|
|
| T |
25341643 |
aattactctcattgaatccattagttgcttgcacaatttcataataggatattcttcttggagctcccaaagttgacaaacccctttcaag |
25341733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 18 - 507
Target Start/End: Original strand, 25800542 - 25801031
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| |||||||| || |||||| |||||| | ||| |||||||||||||||||||||||||| ||||||||||| || | ||||||||| |
|
|
| T |
25800542 |
gtgcaaccatattttcatccaataagacattagaaggctttagatcgcaatgaaccactggtattgaagaaccatgatggagatattctactgcagatgc |
25800641 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||| || |||||||| ||||||| | | ||||||||| || || |||||||| || ||||||||||||||||| ||||||||||| |
|
|
| T |
25800642 |
aacatctatcattatatttaacctttgtaagaaatttagacaatagttatttgaatataaccatttgtctacacttccatttgacatgaactccatcacc |
25800741 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| |||||||||||| ||||||| ||||| |||||||||| || | ||||||||| || || || | ||| ||||| ||||||||||||||||| ||| |
|
|
| T |
25800742 |
aatgatttgaaatcaagatttgagcaactgctgataatctttaccaaatttcgatgacgtagatttctcatcgcattgcattctgcatcaaagctctttg |
25800841 |
T |
|
| Q |
318 |
atgctgcttc-cattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagta |
416 |
Q |
| |
|
|| ||| || |||| ||| |||| |||||| ||||| ||||||| ||| || |||| | || ||||| ||||| |||||||| ||||||||||| | |
|
|
| T |
25800842 |
attttgcctctgattg-caaatcaattactttgactgcaatcatctcaccatcaggaagcttcccctgataaacagagccaaatcccccccttccaagga |
25800940 |
T |
|
| Q |
417 |
atttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaag |
507 |
Q |
| |
|
| ||||||||| ||||||||||||||||||| || ||||||||||| || || ||| ||||| |||||| ||| || |||||||||||||| |
|
|
| T |
25800941 |
aattactctcattgaatccattagttgcttgcacaagttcataatacgatattcttcttggagctcctaaagttgacaaacccctttcaag |
25801031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 18 - 533
Target Start/End: Complemental strand, 22900606 - 22900091
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||||| | ||||||||| ||||| |||||||||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
22900606 |
gtgcaaccatatcttcgtccagcaagacattactaggctttagatcacaatggaccacaggtattgaagaaccatgatggagatattccaatgcatatgc |
22900507 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||| || |||||||||||||||| ||| || | |||| || || |||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
22900506 |
aacatctatcattatatttaacctttgcaagaaatttaaacaacaattatttgaatataaccatttgtccacacttccatttgacatgaactccatcacc |
22900407 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| | |||||||||| |||||||||||| |||||||||| ||| |||||||||||||| || || | || |||||| |||||| ||||||||| | | |
|
|
| T |
22900406 |
aatgctttgaaatcaatatttgaacaactgctgataatcttaaccagatttcgatgccgtagatttctcaatgcattgcattctcgatcaaagctccgta |
22900307 |
T |
|
| Q |
318 |
atgctgcttccattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagtaa |
417 |
Q |
| |
|
|| | | ||| |||| |||| |||||||| || | |||| ||| | |||||| | || | ||||||||| |||||||| ||||||||||| || |
|
|
| T |
22900306 |
atttttcctccgagttcaaatcaatcactttaaccgcaaatatctcaccatttgaaagcttcccctcatacacagacccaaatcctccccttccaagcaa |
22900207 |
T |
|
| Q |
418 |
tttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaagtggattttca |
517 |
Q |
| |
|
||||||||| | |||||||| |||||||| || || |||||||| ||||| ||| ||||| |||| | ||| |||||| |||||||| | ||||||| |
|
|
| T |
22900206 |
attactctcattaaatccatttgttgcttgcacaagctcataataagaaattcttcttggagctccaagagttgataaatttctttcaagagtattttca |
22900107 |
T |
|
| Q |
518 |
acatttctccttttat |
533 |
Q |
| |
|
|| || ||||||||| |
|
|
| T |
22900106 |
accattttccttttat |
22900091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 18 - 507
Target Start/End: Original strand, 25453246 - 25453735
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| |||||||| ||| |||||| |||||| | ||||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
25453246 |
gtgcaaccatattttcatccaacaagacattagaaggctttagatcacaatgaaccacaggcattgaagaaccatgatgaagatattccaatgcagatgc |
25453345 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||| || ||||||||||||||| | | ||||||||| || || |||||||| || ||||||||||||||||| || ||||| || |
|
|
| T |
25453346 |
aacatctatcattatatttaacctttgcaagaaactgagacaatagttatttgaatataaccatttgtctacacttccatttgacatgaattccattacc |
25453445 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| |||||||||||| ||||||| ||||| |||||||||| || ||||||||||| || || || | ||||||||| |||||| |||||||||| ||| |
|
|
| T |
25453446 |
aatgatttgaaatcaagatttgagcaactgctgataatctttaccagatttcgatgtcgtagatttctcattgcattgcattcttcatcaaagctctttg |
25453545 |
T |
|
| Q |
318 |
atgctgcttc-cattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagta |
416 |
Q |
| |
|
|| ||| || |||| ||| |||| |||||||||||| ||||||| ||| | |||| | || ||||| ||||| |||||||| ||||||||||| | |
|
|
| T |
25453546 |
attttgcctctgattg-caaatcaattactttaactgcaatcatctcaccatcaagaagcttcccctgataaacagagccaaatcccccccttccaagga |
25453644 |
T |
|
| Q |
417 |
atttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaag |
507 |
Q |
| |
|
| ||||||||| ||||||||||||||||||| | |||||||||||||| || ||| ||||| ||| | ||| || |||||||||||||| |
|
|
| T |
25453645 |
aattactctcattgaatccattagttgcttgcaaaagttcataataggatattcttcttggagttcccaaagttgacaaacccctttcaag |
25453735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 18 - 483
Target Start/End: Original strand, 25685911 - 25686379
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| |||||||| ||| ||||| |||||| | ||| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
25685911 |
gtgcaaccatattttcatccaacaagacattcgaaggctttagatcgcaatgaaccacaggtattgaagaaccatgatgaagatattccaatgcagatgc |
25686010 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatca---gagtacaaccatttttccacacttccatttgacataaactccatc |
214 |
Q |
| |
|
|||||||||||||| || |||||||| ||||||| | | ||||||||| | || || |||||||| || ||||||||||||||||| ||||||||| |
|
|
| T |
25686011 |
aacatctatcattatatttaacctttgtaagaaatttagacaatagttattatttgaatataaccatttgtctacacttccatttgacatgaactccatc |
25686110 |
T |
|
| Q |
215 |
actagagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttc |
314 |
Q |
| |
|
|| | ||||| |||||| ||||||| ||||||| |||||||| || ||||||||||| || || || | ||| ||||| ||||||||||||||||| |
|
|
| T |
25686111 |
accaatgatttaaaatcaagatttgagcaactaccgataatctttactagatttcgatgtcgtagatttctcatcgcattgcattctgcatcaaagctca |
25686210 |
T |
|
| Q |
315 |
ttgatgctgcttc-cattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaa |
413 |
Q |
| |
|
||||| ||| || |||| ||| |||| |||||||||||| ||||||| ||| | |||| | || ||||| ||||| |||||||| |||||||||| |
|
|
| T |
25686211 |
ttgattttgcctctgattg-caaatcaattactttaactgcaatcatctcaccatcaagaagcttcccatgataaacagagccaaatcccccccttccaa |
25686309 |
T |
|
| Q |
414 |
gtaatttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcc |
483 |
Q |
| |
|
| || ||||||||| ||||||||||||||||||| || |||||||||||||| || ||| ||||| |||| |
|
|
| T |
25686310 |
ggaaattactctcattgaatccattagttgcttgaacaagttcataataggatattcttcttggagctcc |
25686379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 18 - 533
Target Start/End: Original strand, 25475925 - 25476440
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| || ||||| || |||||| |||||| | ||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
25475925 |
gtgcaaccatatttttatccaacatgacattagaaggctttagatcgcaatgaaccacaggtattgaagaaccatgatggagatattccaatgcagatgc |
25476024 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||| || | |||| | || |||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
25476025 |
aacatctatcattatattcaacctttgcaagaaactcaaacaacaattatttaaatataaccatttgtccacacttccatttgacatgaactccatcacc |
25476124 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| ||||||||||| ||||||||||||||| ||||||| ||| ||||||||||| || || || | | ||||||| |||||| |||||||||| ||| |
|
|
| T |
25476125 |
aatgatttgaaatcgagatttgaacaactacaaataatcttaacaagatttcgatgtcgtagatttctcgttgcattgcattctacatcaaagctctttg |
25476224 |
T |
|
| Q |
318 |
atgctgcttc-cattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagta |
416 |
Q |
| |
|
| ||| || | || ||| |||| ||||||||| || ||||||| || | || | || |||| ||||| ||||| || |||| |||||||| |
|
|
| T |
25476225 |
cttttgcctctgactg-caaatcaattactttaaccgcaatcatctcatcattgcggagattcccccgatatacagagccaaagcccccccgtccaagta |
25476323 |
T |
|
| Q |
417 |
atttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaagtggattttc |
516 |
Q |
| |
|
| |||| |||| ||||||||||||||||||| || ||||||||||||||||| ||| || || |||||| ||| ||||||||||||||||| | ||||| |
|
|
| T |
25476324 |
aattacactcattgaatccattagttgcttgcacaagttcataataggaaattcttcttagagctcctaaagttgataaacccctttcaagagtattttg |
25476423 |
T |
|
| Q |
517 |
aacatttctccttttat |
533 |
Q |
| |
|
|| ||| ||||||||| |
|
|
| T |
25476424 |
aatctttttccttttat |
25476440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 18 - 447
Target Start/End: Complemental strand, 24912880 - 24912451
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| |||||||| ||| ||||| |||||| | ||||||||||||||| || ||||||||||| |||| ||||| |||||||||||||| |
|
|
| T |
24912880 |
gtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacaggcattgaagaaccaagatgaagatattccaatgcagatgc |
24912781 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||| || ||||||||||||||| | | ||||||||| || || |||||||| || ||||||||||||||||| ||||||||||| |
|
|
| T |
24912780 |
aacatctatcattatatttaacctttgcaagaaacttagacaatagttatttgaatataaccatttgtctacacttccatttgacatgaactccatcacc |
24912681 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| |||||||||||| ||||||| ||||| |||||||||| || ||||||||||| || || || | ||| ||||| |||||| |||||||||| ||| |
|
|
| T |
24912680 |
aatgatttgaaatcaagatttgagcaactgctgataatctttaccagatttcgatgtcgtagatttctcatcgcattgcattctacatcaaagctctttg |
24912581 |
T |
|
| Q |
318 |
atgctgcttc-cattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagta |
416 |
Q |
| |
|
|| ||| || |||| ||| |||| |||||||||||| ||||||| ||| | |||| | || ||||| ||||| |||||||| ||||||||||| | |
|
|
| T |
24912580 |
attttgcctctgattg-caaatcaattactttaactgcaatcatctcaccatcaagaagcttcccatgataaacagagccaaatcccccccttccaagga |
24912482 |
T |
|
| Q |
417 |
atttactctcactgaatccattagttgcttg |
447 |
Q |
| |
|
| ||||||||| ||||||||||||||||||| |
|
|
| T |
24912481 |
aattactctcattgaatccattagttgcttg |
24912451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 18 - 507
Target Start/End: Original strand, 25570150 - 25570639
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| |||||||| || ||||| ||||| | |||||| |||||||| || ||||||||||| ||||| ||||| | |||||||||||| |
|
|
| T |
25570150 |
gtgcaaccatattttcatccaacatgacattggagggctttagatcacagtgaaccacaggcattgaagaaccatgatgaagatatttcaatgcagatgc |
25570249 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||| || ||||||||||||||| | | ||||||||| || || |||||||| || ||||||||||||||||| ||||||||||| |
|
|
| T |
25570250 |
aacatctatcattatatttaacctttgcaagaaacttagacaatagttatttgaatataaccatttgtctacacttccatttgacatgaactccatcacc |
25570349 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| |||||||||||| ||||||| |||||||||||||||| || ||||||||||| || || || | ||||||||| ||||||||||||||||| ||| |
|
|
| T |
25570350 |
aatgatttgaaatcaagatttgagcaactactgataatctttaccagatttcgatgtcgtagatttctcattgcattgcattctgcatcaaagctctttg |
25570449 |
T |
|
| Q |
318 |
atgctgcttc-cattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagta |
416 |
Q |
| |
|
|| ||| || ||||| || |||| |||||| ||||| || |||| ||| || |||| |||||||||||||| ||||| | ||||||||||||| |
|
|
| T |
25570450 |
attttgcctctgattgt-aaatcaaatactttgactgcaataatctcaccatcaggaagctccccttgatacacagagccaaagctcccccttccaagta |
25570548 |
T |
|
| Q |
417 |
atttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaag |
507 |
Q |
| |
|
|||| |||||| |||||||||| ||||||| | ||||||||||| || || ||| || || |||||| || ||||||||||||||||| |
|
|
| T |
25570549 |
attttctctcattgaatccatttgttgctttcaaaagttcataatatgatattcttcttagagctcctaaagctgataaacccctttcaag |
25570639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 52 - 517
Target Start/End: Original strand, 25604935 - 25605400
Alignment:
| Q |
52 |
aggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgccacatctatcattatgttcaacctttgcaagaaa |
151 |
Q |
| |
|
|||||| | ||| ||||||||||| |||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||| || |||||||| |||||| |
|
|
| T |
25604935 |
aggctttagatctcaatgaaccacaggtattgaagaaccatgatgaagatattccaatgcagatgcaacatctatcattatatttaacctttgtaagaaa |
25605034 |
T |
|
| Q |
152 |
tccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcactagagatttgaaatcaggatttgaacaactactga |
251 |
Q |
| |
|
| | | ||||||||| || || ||||||||||| ||||||||||||||||| ||||||||||| | |||||||||||| ||||||| ||||| |||| |
|
|
| T |
25605035 |
tttagacaatagttatttgaatataaccatttttctacacttccatttgacatgaactccatcaccaatgatttgaaatcaagatttgagcaactgctga |
25605134 |
T |
|
| Q |
252 |
taatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttgatgctgcttc-cattgtcaagtcaagtactttaa |
350 |
Q |
| |
|
|||||| || ||||| ||||| || || || | ||| ||||| ||||||||||||||||| ||||| ||| || |||| ||| |||| |||||||| |
|
|
| T |
25605135 |
taatctttaccagattccgatgtcgtagatttctcatcgcattgcattctgcatcaaagctctttgattttgcctctgattg-caaatcaattactttaa |
25605233 |
T |
|
| Q |
351 |
ctgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagtaatttactctcactgaatccattagttgcttggac |
450 |
Q |
| |
|
| || ||||| | ||| | |||| | || ||||| |||||||||||| | ||||||||||| || ||||||||| |||||||||| |||||||| || |
|
|
| T |
25605234 |
cggcaatcatttcaccatcaagaagcttgccctgataaacagatccaaatgctccccttccaaggaaattactctcattgaatccatttgttgcttgcac |
25605333 |
T |
|
| Q |
451 |
gagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaagtggattttca |
517 |
Q |
| |
|
||||||||||| || || ||| ||||| |||| | ||| || ||||||||| |||| | ||||||| |
|
|
| T |
25605334 |
aagttcataatatgatattcttcttggagctcccaaagttgacaaaccccttccaagagtattttca |
25605400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 120 - 507
Target Start/End: Complemental strand, 24875151 - 24874764
Alignment:
| Q |
120 |
catctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcactag |
219 |
Q |
| |
|
||||||||||||| || ||||||||||||||| | | ||||||||| || || ||||| | || ||||||||||||||||| ||||||||||| | |
|
|
| T |
24875151 |
catctatcattatatttaacctttgcaagaaacttagacaatagttatttgaatataaccaactgtctacacttccatttgacatgaactccatcaccaa |
24875052 |
T |
|
| Q |
220 |
agatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttgat |
319 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||| || ||||||||||| || || || | ||||||||| ||||||||||||||||| ||||| |
|
|
| T |
24875051 |
tgatttgaaatcaagatttgagcaactactgataatctttaccagatttcgatgacgtagatttctcattgcattgcattctgcatcaaagctctttgat |
24874952 |
T |
|
| Q |
320 |
gctgcttc-cattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagtaat |
418 |
Q |
| |
|
||| || ||||| || |||| |||||| ||||| || |||| ||| || |||| |||||||||||||| ||||| | ||||||||||||||| |
|
|
| T |
24874951 |
tttgcctctgattgt-aaatcaaatactttgactgcaataatctcaccatcaggaagctccccttgatacacagagccaaagctcccccttccaagtaat |
24874853 |
T |
|
| Q |
419 |
ttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaag |
507 |
Q |
| |
|
|| |||||| |||||||||| ||||||| | ||||||||||| || || ||| || || |||||| || ||||||||||||||||| |
|
|
| T |
24874852 |
tttctctcattgaatccatttgttgcttacaaaagttcataatatgatattcttcttagagctcctaaagctgataaacccctttcaag |
24874764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 200 - 507
Target Start/End: Original strand, 25311445 - 25311752
Alignment:
| Q |
200 |
gacataaactccatcactagagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacatt |
299 |
Q |
| |
|
||||| ||||||||||| | |||||||||||| ||||||||||||| |||||||||| ||| ||||||||||| || || || | ||||||||| |||| |
|
|
| T |
25311445 |
gacatgaactccatcaccaatgatttgaaatcaagatttgaacaactgctgataatcttaaccagatttcgatgtcgtagatttctcattgcattgcatt |
25311544 |
T |
|
| Q |
300 |
ctgcatcaaagcttcttgatgctgcttc-cattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaa |
398 |
Q |
| |
|
||||||||||||| ||||| ||| || |||| ||| |||| ||||||||| || ||||||| ||| | |||| | || ||||| ||||| |||| |
|
|
| T |
25311545 |
ctgcatcaaagctctttgattttgcctctgattg-caaatcaattactttaacggcaatcatctcaccatcaagaagcttgccctgataaacagagccaa |
25311643 |
T |
|
| Q |
399 |
atccaccccttccaagtaatttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacc |
498 |
Q |
| |
|
|||| ||||||||||| || ||||||||| ||||||||||||||||||| || | |||||||||||| || ||| ||||| |||| | ||| || ||||| |
|
|
| T |
25311644 |
atcccccccttccaaggaaattactctcattgaatccattagttgcttgcacaatttcataataggatattcttcttggagctcccaaagttgacaaacc |
25311743 |
T |
|
| Q |
499 |
cctttcaag |
507 |
Q |
| |
|
||||||||| |
|
|
| T |
25311744 |
cctttcaag |
25311752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 25490461 - 25490594
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| |||||||| ||| ||||| |||||| | ||||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
25490461 |
gtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacaggcattgaagaaccatgatgaagatattccaatgcagatgc |
25490560 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaa |
151 |
Q |
| |
|
|||||||||||||| || ||||||||||||||| |
|
|
| T |
25490561 |
aacatctatcattatatttaacctttgcaagaaa |
25490594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 24875226 - 24875157
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaaga |
87 |
Q |
| |
|
|||||||||||| |||||||| ||| ||||| |||||| | ||||||||||||||||||||||||||| |
|
|
| T |
24875226 |
gtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccactggtattgaaga |
24875157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 155; Significance: 6e-82; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 18 - 528
Target Start/End: Original strand, 10324117 - 10324621
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| |||||||| ||| |||||| |||||| | ||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
10324117 |
gtgcaaccatattttcatccaacaagacattagaaggctttagatcacaatgaaccacgggtattgaagaaccatgatggagatattccaatgcagatgc |
10324216 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||| || ||||| |||||||||| || |||||||||| || || ||||| | |||||||||||||||||||| ||||||| ||| |
|
|
| T |
10324217 |
aacatctatcattatatttaacctatgcaagaaatttaagcaatagttatctgaatataaccaatcgtccacacttccatttgacatgaactccagcacc |
10324316 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| | |||||||||| |||||||||||||||||||||||| ||| ||||||||||| || || || | |||| |||| |||||||||||||||||| ||| |
|
|
| T |
10324317 |
aatgctttgaaatcatgatttgaacaactactgataatcttaaccagatttcgatgtcgtagatttctcattacattgcattctgcatcaaagcttgttg |
10324416 |
T |
|
| Q |
318 |
atgctgcttccattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagtaa |
417 |
Q |
| |
|
|| ||| || || | |||| |||||| ||||| ||||||| || || |||||| || ||||||||||| ||||| | |||||||||||||| |
|
|
| T |
10324417 |
attttgcctc---tg---aatcaattactttgactgcaatcatctcaccgtcaggaagcatcccctgatacacagagccaaagctcccccttccaagtaa |
10324510 |
T |
|
| Q |
418 |
tttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaagtggattttca |
517 |
Q |
| |
|
|||||||||| |||| ||||| ||||||| || ||||||||||| || || ||| ||| | |||||| | ||||| |||||||||| | ||||||| |
|
|
| T |
10324511 |
tttactctcattgaaaccatttgttgcttccacaagttcataatatgatattcttcttgtagctcctaaaactgataattccctttcaagagtattttca |
10324610 |
T |
|
| Q |
518 |
acatttctcct |
528 |
Q |
| |
|
|| ||| |||| |
|
|
| T |
10324611 |
acgtttttcct |
10324621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 149; Significance: 2e-78; HSPs: 2)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 18 - 533
Target Start/End: Complemental strand, 16840 - 16325
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| |||||||| ||| ||||| |||||| | ||||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
16840 |
gtgcaaccatattttcatccaacaagacattggaaggctttagatcacaatgaaccacaggcattgaagaaccatgatgaagatattccaatgcagatgc |
16741 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|| ||||||||||| || ||||||||||||||| | | ||||||||| || || ||||| | || ||||||||||||||||| ||||||||||| |
|
|
| T |
16740 |
aacttctatcattatatttaacctttgcaagaaacttagacaatagttatttgaatataaccaactgtctacacttccatttgacatgaactccatcacc |
16641 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| |||||||||||| ||||||| ||||| |||||||||| || | ||||||||| || || || | ||| ||||| ||||||||||||||||| ||| |
|
|
| T |
16640 |
aatgatttgaaatcaagatttgagcaactgctgataatctttaccaaatttcgatgtcgtagatttctcatcgcattgcattctgcatcaaagctctttg |
16541 |
T |
|
| Q |
318 |
atgctgcttcc-attgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagta |
416 |
Q |
| |
|
|| ||| || |||| ||| |||| ||||||||| || ||||||| ||| | |||| | || ||||| ||||| |||||||| || |||||||| | |
|
|
| T |
16540 |
attttgcctctgattg-caaatcaattactttaacggcaatcatctcaccatcaagaagcttcccctgataaacagagccaaatcccccacttccaagga |
16442 |
T |
|
| Q |
417 |
atttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaagtggattttc |
516 |
Q |
| |
|
| ||||||||| ||||||||||||||||||| || |||||||||||||| || ||| ||||| |||||| ||| || |||||||||||||| | |||||| |
|
|
| T |
16441 |
aattactctcattgaatccattagttgcttgcacaagttcataataggatattcttcttggagctcctagagttgacaaacccctttcaagagtattttc |
16342 |
T |
|
| Q |
517 |
aacatttctccttttat |
533 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
16341 |
attctttctccttttat |
16325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 404 - 507
Target Start/End: Complemental strand, 49972 - 49869
Alignment:
| Q |
404 |
ccccttccaagtaatttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaaccccttt |
503 |
Q |
| |
|
|||| ||||||||| |||| |||||| ||||||||||||||||| || ||||||||||||||||| ||| || || |||||| ||| ||||||||||||| |
|
|
| T |
49972 |
ccccgtccaagtaaattacactcactaaatccattagttgcttgcacaagttcataataggaaattcttcttagagctcctaaagttgataaaccccttt |
49873 |
T |
|
| Q |
504 |
caag |
507 |
Q |
| |
|
|||| |
|
|
| T |
49872 |
caag |
49869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0830 (Bit Score: 147; Significance: 3e-77; HSPs: 1)
Name: scaffold0830
Description:
Target: scaffold0830; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 18 - 523
Target Start/End: Complemental strand, 4326 - 3821
Alignment:
| Q |
18 |
gtgcaaccatatcttcatccagcaacacattactaggcttcaaatcacaatgaaccactggtattgaagaaccgtgatggagatactccaatgcagatgc |
117 |
Q |
| |
|
|||||||||||| |||||||| ||| ||||| |||||| | ||| ||||||||||| |||||||||||||| ||||| ||||| |||||||| ||||| |
|
|
| T |
4326 |
gtgcaaccatattttcatccaacaagacatttgaaggctttagatctcaatgaaccacaggtattgaagaaccatgatgtagatattccaatgctgatgc |
4227 |
T |
|
| Q |
118 |
cacatctatcattatgttcaacctttgcaagaaatccaaaaaatagttatcagagtacaaccatttttccacacttccatttgacataaactccatcact |
217 |
Q |
| |
|
|||||||||||||| || |||||||||||||||| | | | || |||| || || |||||||| || ||||||||||||||||| ||||||||||| |
|
|
| T |
4226 |
aacatctatcattatatttaacctttgcaagaaatttatacattatttatttgaatataaccatttgtctacacttccatttgacatgaactccatcacc |
4127 |
T |
|
| Q |
218 |
agagatttgaaatcaggatttgaacaactactgataatctgaacgagatttcgatgccgaaggttgcacattgcattacattctgcatcaaagcttcttg |
317 |
Q |
| |
|
| |||||||||||| ||||||||||||| |||||||||| ||| ||||||||||| || || || | ||||||||| |||||| ||||||| || ||| |
|
|
| T |
4126 |
aatgatttgaaatcaagatttgaacaactgctgataatcttaaccagatttcgatgtcgtagatttctcattgcattgcattctacatcaaaactctttg |
4027 |
T |
|
| Q |
318 |
atgctgcttc-cattgtcaagtcaagtactttaactgctatcatcttcccactagaaagcattccttgatacacagatccaaatccaccccttccaagta |
416 |
Q |
| |
|
|| ||| || |||| ||| |||| |||||||||||| ||||||| ||| ||| |||| | || | ||||||||| ||||| | ||||||||||||| |
|
|
| T |
4026 |
attttgcctcagattg-caaatcaattactttaactgcaatcatctcaccattaggaagcttcccctcatacacagaaccaaagctcccccttccaagta |
3928 |
T |
|
| Q |
417 |
atttactctcactgaatccattagttgcttggacgagttcataataggaaatcctttttggaactcctatagtggataaacccctttcaagtggattttc |
516 |
Q |
| |
|
|||| ||||| ||||||||| ||||||| || ||||||||||| || || ||| ||||| |||||| | |||||||||||||||| | |||||| |
|
|
| T |
3927 |
atttgctctcttcgaatccatttgttgcttccacaagttcataatatgatattcttcttggagctcctaatgctgataaacccctttcaaaagtattttc |
3828 |
T |
|
| Q |
517 |
aacattt |
523 |
Q |
| |
|
||||||| |
|
|
| T |
3827 |
aacattt |
3821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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