View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20115_low_9 (Length: 309)

Name: NF20115_low_9
Description: NF20115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20115_low_9
NF20115_low_9
[»] chr4 (27 HSPs)
chr4 (190-303)||(27863456-27863569)
chr4 (1-44)||(53431738-53431781)
chr4 (1-52)||(7141091-7141141)
chr4 (131-174)||(27863564-27863607)
chr4 (56-124)||(55496069-55496132)
chr4 (56-127)||(30653323-30653389)
chr4 (75-137)||(37114481-37114542)
chr4 (70-127)||(24152677-24152733)
chr4 (75-127)||(19912674-19912725)
chr4 (75-127)||(27531831-27531882)
chr4 (75-127)||(30411299-30411350)
chr4 (75-127)||(40674748-40674800)
chr4 (1-41)||(55495137-55495177)
chr4 (68-127)||(7113555-7113613)
chr4 (75-122)||(38005551-38005597)
chr4 (9-42)||(40674858-40674891)
chr4 (86-127)||(44448448-44448488)
chr4 (75-136)||(45549645-45549705)
chr4 (75-136)||(49335238-49335298)
chr4 (1-54)||(49646122-49646174)
chr4 (75-132)||(53284003-53284059)
chr4 (75-127)||(202291-202342)
chr4 (75-127)||(6238189-6238240)
chr4 (75-127)||(19801910-19801961)
chr4 (75-127)||(39840242-39840293)
chr4 (75-127)||(51924027-51924078)
chr4 (75-127)||(53431631-53431682)
[»] chr3 (20 HSPs)
chr3 (56-127)||(51980733-51980799)
chr3 (75-127)||(40374555-40374606)
chr3 (56-131)||(42528088-42528158)
chr3 (75-132)||(12122928-12122984)
chr3 (75-127)||(32111607-32111658)
chr3 (1-44)||(12122122-12122165)
chr3 (1-44)||(25999118-25999161)
chr3 (1-54)||(2229117-2229169)
chr3 (75-132)||(5505928-5505984)
chr3 (75-132)||(41991731-41991787)
chr3 (1-54)||(43359250-43359302)
chr3 (75-132)||(48747400-48747456)
chr3 (75-127)||(6586266-6586317)
chr3 (75-127)||(8321478-8321529)
chr3 (75-127)||(19274731-19274782)
chr3 (75-127)||(34436022-34436073)
chr3 (75-127)||(45355131-45355182)
chr3 (75-127)||(50938284-50938335)
chr3 (1-33)||(51980850-51980882)
chr3 (86-126)||(54463514-54463553)
[»] chr8 (15 HSPs)
chr8 (75-127)||(4477666-4477717)
chr8 (75-134)||(284812-284870)
chr8 (75-134)||(631007-631065)
chr8 (75-134)||(816819-816877)
chr8 (56-127)||(2773615-2773681)
chr8 (75-127)||(12208807-12208858)
chr8 (75-127)||(12453235-12453286)
chr8 (75-127)||(18146343-18146394)
chr8 (75-127)||(22215112-22215163)
chr8 (75-127)||(43150253-43150304)
chr8 (75-127)||(45069866-45069917)
chr8 (1-52)||(2773531-2773581)
chr8 (75-134)||(5838250-5838308)
chr8 (75-127)||(20697553-20697604)
chr8 (75-127)||(43800816-43800867)
[»] chr7 (23 HSPs)
chr7 (75-127)||(46350883-46350934)
chr7 (1-54)||(9806537-9806589)
chr7 (75-136)||(27826701-27826761)
chr7 (75-132)||(40061159-40061215)
chr7 (70-127)||(44570933-44570989)
chr7 (75-127)||(9806636-9806687)
chr7 (75-127)||(30582672-30582723)
chr7 (75-127)||(35670401-35670452)
chr7 (75-127)||(37658162-37658213)
chr7 (56-132)||(46534404-46534475)
chr7 (70-136)||(981329-981394)
chr7 (70-127)||(21920838-21920894)
chr7 (83-132)||(31969521-31969569)
chr7 (75-132)||(43156564-43156620)
chr7 (75-127)||(3370450-3370501)
chr7 (75-127)||(28494323-28494374)
chr7 (75-127)||(35747026-35747077)
chr7 (75-127)||(42329070-42329121)
chr7 (75-127)||(42329602-42329653)
chr7 (75-127)||(42997515-42997566)
chr7 (75-127)||(43544943-43544994)
chr7 (72-132)||(46536118-46536177)
chr7 (75-127)||(48935236-48935287)
[»] chr2 (16 HSPs)
chr2 (75-127)||(43568364-43568415)
chr2 (75-128)||(18109762-18109814)
chr2 (75-128)||(39532062-39532114)
chr2 (75-127)||(7183329-7183380)
chr2 (75-127)||(10247430-10247481)
chr2 (75-127)||(10361394-10361445)
chr2 (75-127)||(16496663-16496714)
chr2 (75-127)||(26340081-26340132)
chr2 (70-127)||(38928532-38928588)
chr2 (70-127)||(45376910-45376966)
chr2 (75-127)||(8875674-8875725)
chr2 (75-127)||(11018079-11018130)
chr2 (75-127)||(12160961-12161012)
chr2 (75-127)||(14958121-14958172)
chr2 (75-127)||(30523610-30523661)
chr2 (75-127)||(39241208-39241259)
[»] chr5 (18 HSPs)
chr5 (72-127)||(3078585-3078639)
chr5 (75-127)||(1923948-1923999)
chr5 (75-127)||(11575623-11575674)
chr5 (1-36)||(17645422-17645457)
chr5 (75-134)||(29525368-29525426)
chr5 (56-127)||(7157530-7157596)
chr5 (70-127)||(3033394-3033450)
chr5 (75-140)||(6789661-6789725)
chr5 (75-132)||(8520493-8520549)
chr5 (1-54)||(20017254-20017306)
chr5 (75-132)||(41734316-41734372)
chr5 (75-127)||(13018995-13019046)
chr5 (75-127)||(15498646-15498697)
chr5 (75-127)||(24171366-24171417)
chr5 (75-127)||(27813048-27813099)
chr5 (75-127)||(34589973-34590024)
chr5 (75-127)||(37530792-37530843)
chr5 (75-127)||(42709312-42709363)
[»] chr6 (10 HSPs)
chr6 (75-124)||(190927-190975)
chr6 (74-127)||(12130482-12130534)
chr6 (70-127)||(13866265-13866321)
chr6 (75-136)||(18368781-18368841)
chr6 (75-127)||(1789788-1789839)
chr6 (75-127)||(22707292-22707343)
chr6 (1-36)||(6833995-6834030)
chr6 (1-54)||(1789886-1789938)
chr6 (75-136)||(24119286-24119346)
chr6 (83-127)||(18801701-18801744)
[»] chr1 (24 HSPs)
chr1 (75-136)||(5698118-5698178)
chr1 (75-127)||(3796011-3796062)
chr1 (83-127)||(9223841-9223884)
chr1 (75-127)||(12014643-12014694)
chr1 (75-127)||(14390423-14390474)
chr1 (75-127)||(38058750-38058801)
chr1 (76-127)||(30899470-30899520)
chr1 (1-44)||(38624176-38624219)
chr1 (1-42)||(2459594-2459635)
chr1 (75-132)||(2459693-2459749)
chr1 (83-136)||(5698500-5698552)
chr1 (82-127)||(31656370-31656414)
chr1 (70-127)||(44278007-44278063)
chr1 (75-127)||(11332843-11332894)
chr1 (75-127)||(11490864-11490915)
chr1 (75-127)||(11823585-11823636)
chr1 (75-127)||(23259086-23259137)
chr1 (75-127)||(27747608-27747659)
chr1 (75-127)||(29092603-29092654)
chr1 (75-127)||(30358075-30358126)
chr1 (1-33)||(30899370-30899402)
chr1 (75-127)||(35179821-35179872)
chr1 (75-127)||(39325612-39325663)
chr1 (75-127)||(50586226-50586277)
[»] scaffold0115 (2 HSPs)
scaffold0115 (75-127)||(4150-4201)
scaffold0115 (75-127)||(11890-11941)
[»] scaffold0060 (1 HSPs)
scaffold0060 (75-134)||(57896-57954)


Alignment Details
Target: chr4 (Bit Score: 106; Significance: 5e-53; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 190 - 303
Target Start/End: Complemental strand, 27863569 - 27863456
Alignment:
Q  190 gaaaccaatttgtctgcaatttagcacttcttcaaccttcttttgaacaacagataggtaatcttcattgttccttatcctttgtgacacaattactcaa 289  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27863569 gaaaccaatttgtctgcaatatagcacttcttcaaccttcttttgaacaacagatcggtaatcttcattgttccttatcctttgtgacacaattactcaa 27863470  T
Q  290 acaaaagagtatac 303  Q
    ||||||||||||||    
T  27863469 acaaaagagtatac 27863456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 53431781 - 53431738
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaagaaaagct 44  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  53431781 ctataagctaaaaagctacttgaattagcttctcaagaaaagct 53431738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7141091 - 7141141
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaagaaaagcttataagct 52  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||||||||    
T  7141091 ctataagttaaaaagctacttgaaatagcttctcaaaaaaag-ttataagct 7141141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 27863607 - 27863564
Alignment:
Q  131 caaagtacatgaacatggttatgttcgtgtttgactttgaaacc 174  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  27863607 caaagtacacgaacatagttatgttcgtgtttgactttgaaacc 27863564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 55496069 - 55496132
Alignment:
Q  56 tttcatccaacaagctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaa 124  Q
    ||||||||||||||||    ||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  55496069 tttcatccaacaagct----tataagctagtccaacaagctat-aagctaacttttttgtgttaccaaa 55496132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 30653323 - 30653389
Alignment:
Q  56 tttcatccaacaagctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    ||||||||||||||||    ||||| |||||||||||||| |||| | ||||||||||||||||||||||||    
T  30653323 tttcatccaacaagct----tataagctagtccaacaagccataa-gctaacttttttgtgttaccaaacac 30653389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 37114481 - 37114542
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaagta 137  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||||||| ||||    
T  37114481 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacacggccatagta 37114542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 24152733 - 24152677
Alignment:
Q  70 ctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||| |||||||||||||||||||||||| ||| || ||| |||||||||||||||||    
T  24152733 ctagcttataaactagtccaacaagctat-aagctagcttatttgtgttaccaaacac 24152677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 19912725 - 19912674
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  19912725 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 19912674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 27531882 - 27531831
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||||||||||||||||||||| |||||| | | |||||||||||||||||    
T  27531882 ttataaactagtccaacaagctat-aagttagcctatttgtgttaccaaacac 27531831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 30411299 - 30411350
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  30411299 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 30411350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 40674800 - 40674748
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| |||||||||||||||   ||| ||||||||||||||||||||||||    
T  40674800 ttataagctagtccaacaagcttataagctaacttttttgtgttaccaaacac 40674748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 55495137 - 55495177
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaagaaaa 41  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  55495137 ctataagttaaaaagctacttgaaatagcttctcaaaaaaa 55495177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 7113555 - 7113613
Alignment:
Q  68 agctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| |||||| ||||||||||||||||| ||| || ||||||| |||||||||||||    
T  7113555 agctagcttataagctagtccaacaagctat-aagctagcttttttatgttaccaaacac 7113613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 122
Target Start/End: Complemental strand, 38005597 - 38005551
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttacca 122  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||||||    
T  38005597 ttataaactagtccaacaagctat-aagctaacttttttatgttacca 38005551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 40674891 - 40674858
Alignment:
Q  9 taaaaagctacttgaattagcttctcaagaaaag 42  Q
    |||||||||||||||| |||||||||||||||||    
T  40674891 taaaaagctacttgaaatagcttctcaagaaaag 40674858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 44448488 - 44448448
Alignment:
Q  86 tccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  44448488 tccaacaagctataa-gttagcttttttgtgttaccaaacac 44448448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 45549705 - 45549645
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaagt 136  Q
    |||||| |||| |||||||||||||| | || ||||||||||||||||||||| ||| ||||    
T  45549705 ttataagctagcccaacaagctataa-gctagcttttttgtgttaccaaacacagccgaagt 45549645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 49335238 - 49335298
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaagt 136  Q
    |||||| ||| ||||||||||||||| | || ||||||||||||||||||||| ||| ||||    
T  49335238 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacacagccgaagt 49335298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 49646174 - 49646122
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaagaaaagcttataagctag 54  Q
    ||||||||| |||||||||||||| ||||||||||| ||| || ||||||||||    
T  49646174 ctataagttcaaaagctacttgaaatagcttctcaaaaaacgc-tataagctag 49646122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 53284059 - 53284003
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggcca 132  Q
    |||||| ||| ||||||||||||||| | || ||||||||||||||||||||| ||||    
T  53284059 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacacagcca 53284003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 202342 - 202291
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  202342 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 202291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 6238240 - 6238189
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  6238240 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 6238189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 19801910 - 19801961
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  19801910 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 19801961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 39840242 - 39840293
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  39840242 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 39840293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 51924078 - 51924027
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||||||  ||  ||||||||||||||||||||    
T  51924078 ttataagctagtccaacaagctataaa-ctagtttttttgtgttaccaaacac 51924027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 53431682 - 53431631
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| ||  ||||||||||||||||||||    
T  53431682 ttataagctagtccaacaagctat-aagctacattttttgtgttaccaaacac 53431631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 51980799 - 51980733
Alignment:
Q  56 tttcatccaacaagctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    ||||||||||||||||    ||||| |||||||||||||||||||| | |||||||||||||||||||||||    
T  51980799 tttcatccaacaagct----tataagctagtccaacaagctataaact-aacttttttgtgttaccaaacac 51980733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 40374555 - 40374606
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||    
T  40374555 ttataagctagtccaacaagctataa-gttagcttttttgtgttaccaaacac 40374606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 42528088 - 42528158
Alignment:
Q  56 tttcatccaacaagctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggcc 131  Q
    ||||||||||||||||    ||||| ||||||||||||||||| ||| || ||||||||||||| |||||||||||    
T  42528088 tttcatccaacaagct----tataagctagtccaacaagctat-aagctagcttttttgtgttatcaaacacggcc 42528158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 12122928 - 12122984
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggcca 132  Q
    |||||| ||||||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  12122928 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacacagcca 12122984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 32111607 - 32111658
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  32111607 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 32111658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12122122 - 12122165
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaagaaaagct 44  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||    
T  12122122 ctataagtttaaaagctacttgaaatagcttctcaaaaaaagct 12122165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25999118 - 25999161
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaagaaaagct 44  Q
    ||||||||||||||| |||||||| ||||||||||| |||||||    
T  25999118 ctataagttaaaaaggtacttgaaatagcttctcaaaaaaagct 25999161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2229117 - 2229169
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaagaaaagcttataagctag 54  Q
    ||||||||| |||||||||||||| ||||||||||| ||| || ||||||||||    
T  2229117 ctataagttcaaaagctacttgaaatagcttctcaaaaaacgc-tataagctag 2229169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 5505984 - 5505928
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggcca 132  Q
    |||||| ||||||||||||| ||||| | || ||||||||||||||||||||| ||||    
T  5505984 ttataagctagtccaacaagttataa-gctagcttttttgtgttaccaaacacagcca 5505928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 41991731 - 41991787
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggcca 132  Q
    |||||| ||| ||||||||||||||| | || ||||||||||||||||||||| ||||    
T  41991731 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacacagcca 41991787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43359250 - 43359302
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaagaaaagcttataagctag 54  Q
    ||||||| | |||||||||||||| ||||||||||| |||||| ||||||||||    
T  43359250 ctataagctcaaaagctacttgaaatagcttctcaaaaaaagc-tataagctag 43359302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 48747456 - 48747400
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggcca 132  Q
    |||||| ||||||||| || |||||| | |||||||||||||||||||||||| ||||    
T  48747456 ttataagctagtccaataaactataa-gctaacttttttgtgttaccaaacacagcca 48747400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 6586317 - 6586266
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| |||||||||||| ||||||| | ||||||||| |||||||||||||    
T  6586317 ttataagctagtccaacaaactataaact-aacttttttatgttaccaaacac 6586266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 8321478 - 8321529
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  8321478 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 8321529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 19274782 - 19274731
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  19274782 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 19274731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 34436022 - 34436073
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  34436022 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 34436073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 45355182 - 45355131
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||| |||||||||| | | |||||||||||||||||||||    
T  45355182 ttataacctagtccaagaagctataaact-agcttttttgtgttaccaaacac 45355131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 50938284 - 50938335
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| |||||| || ||||||||||||||    
T  50938284 ttataagctagtccaacaagctat-aagctaacttattcgtgttaccaaacac 50938335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 51980882 - 51980850
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttct 33  Q
    |||||||||||||||||||||||| ||||||||    
T  51980882 ctataagttaaaaagctacttgaaatagcttct 51980850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 54463514 - 54463553
Alignment:
Q  86 tccaacaagctataaagttaacttttttgtgttaccaaaca 126  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  54463514 tccaacaaactataa-gttaacttttttgtgttaccaaaca 54463553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000007; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 4477666 - 4477717
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  4477666 ttataatctagtccaacaagctataa-gctaacttttttgtgttaccaaacac 4477717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 284870 - 284812
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaa 134  Q
    |||||| ||| |||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  284870 ttataagctaatccaacaagctataaact-aacttttttgtgttaccaaacacagccaaa 284812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 631007 - 631065
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaa 134  Q
    |||||| ||| |||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  631007 ttataagctaatccaacaagctataaact-aacttttttgtgttaccaaacacagccaaa 631065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 816819 - 816877
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaa 134  Q
    |||||| ||| |||||||||||||||| | ||||||||||||||||||||||| ||||||    
T  816819 ttataagctaatccaacaagctataaact-aacttttttgtgttaccaaacacagccaaa 816877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 2773615 - 2773681
Alignment:
Q  56 tttcatccaacaagctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    ||||||||||||||||    ||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  2773615 tttcatccaacaagct----tataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 2773681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 12208858 - 12208807
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  12208858 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 12208807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 12453286 - 12453235
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  12453286 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 12453235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 18146394 - 18146343
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  18146394 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 18146343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 22215163 - 22215112
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | ||||||||||||||||||||||||    
T  22215163 ttataagctaatccaacaagctataa-gctaacttttttgtgttaccaaacac 22215112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 43150304 - 43150253
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  43150304 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 43150253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 45069866 - 45069917
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  45069866 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 45069917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 2773531 - 2773581
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaagaaaagcttataagct 52  Q
    ||||||| |||||||||||||||| ||||||||||| ||||| |||||||||    
T  2773531 ctataagctaaaaagctacttgaaatagcttctcaaaaaaag-ttataagct 2773581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 5838308 - 5838250
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaa 134  Q
    |||||| ||| ||||||||||||||| |||| ||||||||| ||||||||||| ||||||    
T  5838308 ttataagctaatccaacaagctataa-gttagcttttttgtattaccaaacacagccaaa 5838250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 20697553 - 20697604
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | |||||||||||| |||||||||||    
T  20697553 ttataagctaatccaacaagctataa-gctaacttttttgtattaccaaacac 20697604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 43800816 - 43800867
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  43800816 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 43800867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 46350883 - 46350934
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  46350883 ttataaactaatccaacaagctataa-gctaacttttttgtgttaccaaacac 46350934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9806537 - 9806589
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaagaaaagcttataagctag 54  Q
    ||||||||||||||||||||||||||||||||| || ||| || ||||||||||    
T  9806537 ctataagttaaaaagctacttgaattagcttcttaaaaaacgc-tataagctag 9806589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 27826761 - 27826701
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaagt 136  Q
    |||||| ||| ||||||||||||||| | || ||||||||||||||||||||| ||||||||    
T  27826761 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacacagccaaagt 27826701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 40061215 - 40061159
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggcca 132  Q
    |||||| ||||||||||||||||||| | || ||||||||||||||||||||| ||||    
T  40061215 ttataagctagtccaacaagctataa-gctagcttttttgtgttaccaaacacagcca 40061159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 44570989 - 44570933
Alignment:
Q  70 ctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||| |||||| ||||||||| ||||||||| | ||||||||||||||||||||||||    
T  44570989 ctagcttataagctagtccaataagctataa-gctaacttttttgtgttaccaaacac 44570933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 9806636 - 9806687
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||||||  |||||||||| |||||||||||||    
T  9806636 ttataagctagtccaacaagctataaa-ctaacttttttatgttaccaaacac 9806687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 30582723 - 30582672
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  30582723 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 30582672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 35670401 - 35670452
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  35670401 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 35670452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 37658162 - 37658213
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  37658162 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 37658213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 46534475 - 46534404
Alignment:
Q  56 tttcatccaacaagctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggcca 132  Q
    ||||||||||||||||    ||||| ||| ||||||||||||||| | || ||||||||||||||||||||| ||||    
T  46534475 tttcatccaacaagct----tataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacacagcca 46534404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 981394 - 981329
Alignment:
Q  70 ctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaagt 136  Q
    |||| |||||| ||| |||||||| |||||| | |||||||||||||||||||||||| | ||||||    
T  981394 ctagcttataagctaatccaacaaactataa-gctaacttttttgtgttaccaaacacagtcaaagt 981329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 21920838 - 21920894
Alignment:
Q  70 ctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||| |||||| ||||||||||||||||| ||| || ||| |||||||||||||||||    
T  21920838 ctagcttataagctagtccaacaagctat-aagctagcttatttgtgttaccaaacac 21920894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 31969521 - 31969569
Alignment:
Q  83 tagtccaacaagctataaagttaacttttttgtgttaccaaacacggcca 132  Q
    ||||||||||| |||||| | |||||||||||||||||||||||| ||||    
T  31969521 tagtccaacaatctataa-gctaacttttttgtgttaccaaacacagcca 31969569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 43156620 - 43156564
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggcca 132  Q
    |||||| ||| ||||||||||||||| | || ||||||||||||||||||||| ||||    
T  43156620 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacacagcca 43156564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 3370501 - 3370450
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||||||| ||||| || ||||||| ||||||||||||| |||||||||||    
T  3370501 ttataaactaatccaaaaaactataaa-ttaacttttttgtattaccaaacac 3370450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 28494323 - 28494374
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  28494323 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 28494374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 35747077 - 35747026
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    ||||||||| ||| |||||||||||| | || |||||||||||||||||||||    
T  35747077 ttataaacttgtcgaacaagctataa-gctagcttttttgtgttaccaaacac 35747026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 42329070 - 42329121
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  42329070 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 42329121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 42329602 - 42329653
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||||||||||||||||||||||| | |   ||||||||||||||||||||    
T  42329602 ttataaactagtccaacaagctataa-gctggtttttttgtgttaccaaacac 42329653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 42997566 - 42997515
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| |||||||||||| |||||||| ||||||||| ||||||| ||||||    
T  42997566 ttataagctagtccaacaaactataaag-taactttttagtgttactaaacac 42997515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 43544943 - 43544994
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| |||||| ||| || ||||||||||||||    
T  43544943 ttataagctagtccaacaagctat-aagttagcttattcgtgttaccaaacac 43544994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 46536177 - 46536118
Alignment:
Q  72 agtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggcca 132  Q
    ||||||||| ||| |||||||||||| || | || ||||||||||||||||||||| ||||    
T  46536177 agtttataagctaatccaacaagctacaa-gctagcttttttgtgttaccaaacacagcca 46536118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 48935287 - 48935236
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||||||| ||||||||||||| ||| || ||| |||||||||||||||||    
T  48935287 ttataaactaatccaacaagctat-aagctagcttatttgtgttaccaaacac 48935236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000007; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 43568415 - 43568364
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  43568415 ttataagctaatccaacaagctataa-gttaacttttttgtgttaccaaacac 43568364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 18109762 - 18109814
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacg 128  Q
    |||||| ||||||||||||||||| ||| || ||||||||||||||||||||||    
T  18109762 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacacg 18109814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 39532114 - 39532062
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacg 128  Q
    |||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  39532114 ttataagctagtccaacaagctat-aagctaatttttttgtgttaccaaacacg 39532062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 7183329 - 7183380
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    ||||||||||||||||||| |||| ||| || |||||||||||||||||||||    
T  7183329 ttataaactagtccaacaaactat-aagctagcttttttgtgttaccaaacac 7183380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 10247430 - 10247481
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| |||||||||||| |||||| | ||||||||||||||||||||||||    
T  10247430 ttataagctagtccaacaaactataa-gctaacttttttgtgttaccaaacac 10247481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 10361445 - 10361394
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  10361445 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 10361394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 16496663 - 16496714
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||||||| ||||||||||||| ||| || |||||||||||||||||||||    
T  16496663 ttataaactaatccaacaagctat-aagctagcttttttgtgttaccaaacac 16496714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 26340081 - 26340132
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||| ||||| |||| |||||||||||||||||||||    
T  26340081 ttataagctagtccaacaagttataa-gttagcttttttgtgttaccaaacac 26340132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 38928532 - 38928588
Alignment:
Q  70 ctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||| |||||| ||||||||||||||||| ||| || ||||||| |||||||||||||    
T  38928532 ctagcttataagctagtccaacaagctat-aagctagcttttttatgttaccaaacac 38928588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 45376966 - 45376910
Alignment:
Q  70 ctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||| |||||| ||||||||||||||||||||  || ||| |||||||||||||||||    
T  45376966 ctagcttataagctagtccaacaagctataaa-ctagcttatttgtgttaccaaacac 45376910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 8875725 - 8875674
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||| ||||| | ||||||||||||||||||||||||    
T  8875725 ttataagctaatccaacaagttataa-gctaacttttttgtgttaccaaacac 8875674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 11018079 - 11018130
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  11018079 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 11018130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 12160961 - 12161012
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  12160961 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 12161012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 14958172 - 14958121
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||||||| |||||||||||||||| ||| ||| ||||| |||||||||||    
T  14958172 ttataaactaatccaacaagctataaa-ttagcttctttgtattaccaaacac 14958121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 30523661 - 30523610
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  30523661 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 30523610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 39241208 - 39241259
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  39241208 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 39241259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 3078585 - 3078639
Alignment:
Q  72 agtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    ||||||||| ||||||||||||| ||||| | ||||||||||||||||||||||||    
T  3078585 agtttataagctagtccaacaagttataa-gctaacttttttgtgttaccaaacac 3078639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 1923999 - 1923948
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  1923999 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 1923948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 11575674 - 11575623
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  11575674 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 11575623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 17645457 - 17645422
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaa 36  Q
    ||||||||||||||| ||||||||||||||||||||    
T  17645457 ctataagttaaaaagatacttgaattagcttctcaa 17645422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 29525368 - 29525426
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaa 134  Q
    |||||| ||| ||||||||||||||| | || ||||||||||||||||||||| ||||||    
T  29525368 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacacagccaaa 29525426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 7157530 - 7157596
Alignment:
Q  56 tttcatccaacaagctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    ||||||||||||||||    |||||  |||||||||||||||||| | || |||||||||||||||||||||    
T  7157530 tttcatccaacaagct----tataagttagtccaacaagctataa-gctagcttttttgtgttaccaaacac 7157596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 3033450 - 3033394
Alignment:
Q  70 ctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||| |||||| ||||||||||||||||| ||| || ||||||| |||||||||||||    
T  3033450 ctagcttataagctagtccaacaagctat-aagctagcttttttatgttaccaaacac 3033394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 6789661 - 6789725
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaagtacat 140  Q
    |||||| ||| ||||||||||||||| | || ||||||||||||||||||||| ||| || |||||    
T  6789661 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacacagcccaaatacat 6789725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 8520549 - 8520493
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggcca 132  Q
    |||||| ||||||||||||||||| |||||| ||| || |||||||||||||| ||||    
T  8520549 ttataagctagtccaacaagctat-aagttagcttattcgtgttaccaaacacagcca 8520493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20017254 - 20017306
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaagaaaagcttataagctag 54  Q
    |||||||||||||||||||||| |||||||||| || ||| || ||||||||||    
T  20017254 ctataagttaaaaagctacttggattagcttcttaaaaaatgc-tataagctag 20017306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 41734316 - 41734372
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggcca 132  Q
    |||||| ||| ||||||||||||||| | || ||||||||||||||||||||| ||||    
T  41734316 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacacagcca 41734372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 13019046 - 13018995
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||| ||||| | || |||||||||||||||||||||    
T  13019046 ttataagctagtccaacaagttataa-gctagcttttttgtgttaccaaacac 13018995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 15498697 - 15498646
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  15498697 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 15498646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 24171417 - 24171366
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  24171417 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 24171366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 27813048 - 27813099
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||||||| | ||||||||||||| | || |||||||||||||||||||||    
T  27813048 ttataaactaattcaacaagctataa-gctagcttttttgtgttaccaaacac 27813099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 34589973 - 34590024
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  34589973 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 34590024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 37530792 - 37530843
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  37530792 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 37530843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 42709363 - 42709312
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  42709363 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 42709312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 190975 - 190927
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaa 124  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  190975 ttataaactagtccaacaagctataaa-ctaacttttttgtgttatcaaa 190927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 12130534 - 12130482
Alignment:
Q  74 tttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    ||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||    
T  12130534 tttataagctaatccaacaagctataa-gctaacttttttgtgttaccaaacac 12130482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 13866321 - 13866265
Alignment:
Q  70 ctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    ||||||||||| ||||||||||||||||| ||| || ||||||| |||||||||||||    
T  13866321 ctagtttataagctagtccaacaagctat-aagctagcttttttatgttaccaaacac 13866265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 18368781 - 18368841
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaagt 136  Q
    |||||| ||||||||||||||||| ||| || ||||||||||||||||||||| ||| ||||    
T  18368781 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacacagcctaagt 18368841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 1789839 - 1789788
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  1789839 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 1789788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 22707343 - 22707292
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||||||| ||||||||||||| ||| || |||||||||||||||||||||    
T  22707343 ttataaactaatccaacaagctat-aagctagcttttttgtgttaccaaacac 22707292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 6833995 - 6834030
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaa 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  6833995 ctataagttaaaaagctacttgaaatagcttctcaa 6834030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1789938 - 1789886
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaagaaaagcttataagctag 54  Q
    |||||||||||||||||||||| |||||||||| || ||| || ||||||||||    
T  1789938 ctataagttaaaaagctacttggattagcttcttaaaaaacgc-tataagctag 1789886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 24119286 - 24119346
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaagt 136  Q
    |||||| ||| ||||||||||||||| | || ||||||||||||||||||||| ||| ||||    
T  24119286 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacacagcctaagt 24119346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 18801744 - 18801701
Alignment:
Q  83 tagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||||||||||||||| | || |||||||||||||||||||||    
T  18801744 tagtccaacaagctataa-gctagcttttttgtgttaccaaacac 18801701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 5698178 - 5698118
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaagt 136  Q
    |||||| ||||||||||||||||||| | || ||||||||||||||||||||| ||| ||||    
T  5698178 ttataagctagtccaacaagctataa-gctagcttttttgtgttaccaaacacagccgaagt 5698118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 3796011 - 3796062
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  3796011 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 3796062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 9223884 - 9223841
Alignment:
Q  83 tagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||||||||||||||| |||| |||||||||||||||||||||    
T  9223884 tagtccaacaagctataa-gttagcttttttgtgttaccaaacac 9223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 12014694 - 12014643
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||||||| ||||||||| ||||| | ||||||||||||||||||||||||    
T  12014694 ttataaactaatccaacaagttataa-gctaacttttttgtgttaccaaacac 12014643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 14390474 - 14390423
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  14390474 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 14390423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 38058801 - 38058750
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  38058801 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 38058750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 30899470 - 30899520
Alignment:
Q  76 tataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    ||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  30899470 tataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 30899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38624219 - 38624176
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaagaaaagct 44  Q
    |||||||||||||||||||||||| |||||| |||| |||||||    
T  38624219 ctataagttaaaaagctacttgaaatagcttttcaaaaaaagct 38624176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2459594 - 2459635
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttctcaagaaaag 42  Q
    ||||||| |||||||||||||||| ||||||||||| |||||    
T  2459594 ctataagctaaaaagctacttgaaatagcttctcaaaaaaag 2459635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 2459693 - 2459749
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggcca 132  Q
    |||||| ||| ||||||||||||||| | || ||||||||||||||||||||| ||||    
T  2459693 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacacagcca 2459749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 5698552 - 5698500
Alignment:
Q  83 tagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaagt 136  Q
    |||||||||||||||||| | || ||||||||||||||||||||| ||| ||||    
T  5698552 tagtccaacaagctataa-gctagcttttttgtgttaccaaacacagccgaagt 5698500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 31656414 - 31656370
Alignment:
Q  82 ctagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||||||||||||||||| | | |||||||||||||||||||||    
T  31656414 ctagtccaacaagctataaact-agcttttttgtgttaccaaacac 31656370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 44278007 - 44278063
Alignment:
Q  70 ctagtttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||| |||||| ||||||||||||||||| |||||| ||| ||||||||| |||||||    
T  44278007 ctagcttataagctagtccaacaagctat-aagttagcttatttgtgttatcaaacac 44278063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 11332894 - 11332843
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| |||||||||||| ||||||| | | |||||||||||||||||||||    
T  11332894 ttataagctagtccaacaaactataaact-agcttttttgtgttaccaaacac 11332843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 11490915 - 11490864
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| |||||||||||| ||||||| | | |||||||||||||||||||||    
T  11490915 ttataagctagtccaacaaactataaact-agcttttttgtgttaccaaacac 11490864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 11823636 - 11823585
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| |||||||||||||||| | | |||||||||||||||||||||    
T  11823636 ttataagctaatccaacaagctataaact-agcttttttgtgttaccaaacac 11823585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 23259137 - 23259086
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| |||||| || ||||||||||||||    
T  23259137 ttataagctagtccaacaagctat-aagctaacttattcgtgttaccaaacac 23259086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 27747659 - 27747608
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  27747659 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 27747608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 29092654 - 29092603
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    ||||||| |||||||| ||||||| | | ||||||||||||||||||||||||    
T  29092654 ttataaattagtccaaaaagctatga-gctaacttttttgtgttaccaaacac 29092603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 30358126 - 30358075
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  30358126 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 30358075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30899370 - 30899402
Alignment:
Q  1 ctataagttaaaaagctacttgaattagcttct 33  Q
    ||||||| |||||||||||||||||||||||||    
T  30899370 ctataagctaaaaagctacttgaattagcttct 30899402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 35179872 - 35179821
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || ||||||| |||||||||||||    
T  35179872 ttataagctagtccaacaagctat-aagctagcttttttatgttaccaaacac 35179821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 39325663 - 39325612
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  39325663 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 39325612  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 50586226 - 50586277
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||| ||||||||||||||| | || |||||||||||||||||||||    
T  50586226 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacac 50586277  T

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Target: scaffold0115 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 4201 - 4150
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  4201 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 4150  T

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Target: scaffold0115; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 11941 - 11890
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacac 127  Q
    |||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  11941 ttataagctagtccaacaagctat-aagctagcttttttgtgttaccaaacac 11890  T

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Target: scaffold0060 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 57896 - 57954
Alignment:
Q  75 ttataaactagtccaacaagctataaagttaacttttttgtgttaccaaacacggccaaa 134  Q
    |||||| ||| ||||||||||||||| | || ||||||||||||||||||||| ||||||    
T  57896 ttataagctaatccaacaagctataa-gctagcttttttgtgttaccaaacacagccaaa 57954  T

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