View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20116_high_39 (Length: 343)
Name: NF20116_high_39
Description: NF20116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20116_high_39 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 16645558 - 16645781
Alignment:
| Q |
1 |
aagatatggctacacatgtcaagtccttgaatactataagcactacgtgtctcttcctgtatttcttgtcggaggtgaaaaatcattcatgcaagcaacc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16645558 |
aagatatggctacacatgtcaagtccttgaatactataagcactacgtgtctcttcctgtatttcttgtcggaggtgaaaaatcattcatgcaagcaacc |
16645657 |
T |
|
| Q |
101 |
aattgatatcaaaaagtggataagagagtgactcatactgattcttgagggtcttaatatgtctatgtgacaatatcttccaaaactagaaaatacttaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16645658 |
aattgatatcaaaaagtggataagagagtgactcatactgattcttgagggtcttaatatgtctatgtgacaatatcttccaaaactagaaaatacttaa |
16645757 |
T |
|
| Q |
201 |
ttgatcataacaagttggacattt |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
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| T |
16645758 |
ttgatcataacaagttggacattt |
16645781 |
T |
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