View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20116_high_48 (Length: 300)
Name: NF20116_high_48
Description: NF20116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20116_high_48 |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 16 - 281
Target Start/End: Original strand, 21139525 - 21139790
Alignment:
| Q |
16 |
atgttggaagattttaagtcacggtatatgacaggtggattggctttgtcatgcaaatattctagtccttttgcagcatccaatgctattttcattcttg |
115 |
Q |
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| T |
21139525 |
atgttggaagattttaagtcacggtatatgacaggtggattggctttgtcatgcaaatattctagtccttttgcagcatccaatgctattttcattcttg |
21139624 |
T |
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| Q |
116 |
tgaaccaatctaatggcttttgttgtggttcaagatctgcattacatttcaataagatgttgatcattaataaaccattaaatttaatgattttctagtc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
21139625 |
tgaaccaatctaatggcttttgttgtggttcaagatctgcattacatttcaataagatgttgataattaataaaccattaaatttaatgattttctagtc |
21139724 |
T |
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| Q |
216 |
atttgattcatttaactacttaaaaaaggtagtctagtacactaaagttttcacatacatagagtt |
281 |
Q |
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||||||||||||||||||| ||||||||||||| |||| |||||||| || | |||||| |||||| |
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| T |
21139725 |
atttgattcatttaactacctaaaaaaggtagtttagtgcactaaagcttccgcatacacagagtt |
21139790 |
T |
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