View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20116_high_84 (Length: 212)

Name: NF20116_high_84
Description: NF20116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20116_high_84
NF20116_high_84
[»] chr6 (34 HSPs)
chr6 (1-150)||(35198447-35198596)
chr6 (1-120)||(34887217-34887335)
chr6 (1-150)||(21893619-21893773)
chr6 (1-150)||(16306897-16307051)
chr6 (1-142)||(28199406-28199551)
chr6 (1-82)||(6086562-6086642)
chr6 (1-82)||(30692015-30692095)
chr6 (1-150)||(30698819-30698972)
chr6 (1-82)||(2837709-2837789)
chr6 (60-150)||(20727049-20727145)
chr6 (1-81)||(53072-53151)
chr6 (59-150)||(1153857-1153954)
chr6 (1-82)||(26704302-26704382)
chr6 (1-73)||(3347495-3347566)
chr6 (1-73)||(18613702-18613773)
chr6 (1-73)||(26946848-26946919)
chr6 (1-73)||(33464493-33464564)
chr6 (1-82)||(3955732-3955809)
chr6 (1-72)||(11167404-11167474)
chr6 (1-76)||(20726951-20727025)
chr6 (59-150)||(18613799-18613896)
chr6 (81-150)||(6086458-6086527)
chr6 (81-150)||(26704200-26704269)
chr6 (1-72)||(9459727-9459797)
chr6 (59-150)||(3347379-3347476)
chr6 (81-139)||(30692129-30692187)
chr6 (59-150)||(33464589-33464685)
chr6 (81-150)||(2837823-2837892)
chr6 (93-146)||(26946729-26946782)
chr6 (91-150)||(3955629-3955688)
chr6 (59-149)||(11167503-11167599)
chr6 (1-73)||(1153757-1153828)
chr6 (81-139)||(53186-53244)
chr6 (1-67)||(17261051-17261116)
[»] chr7 (57 HSPs)
chr7 (1-150)||(6394914-6395062)
chr7 (1-150)||(4477206-4477354)
chr7 (1-150)||(20346651-20346799)
chr7 (1-150)||(46134183-46134337)
chr7 (1-152)||(43021458-43021613)
chr7 (1-150)||(36890708-36890863)
chr7 (1-137)||(5281023-5281163)
chr7 (1-147)||(1803189-1803338)
chr7 (9-150)||(43156884-43157028)
chr7 (1-82)||(12101131-12101211)
chr7 (1-82)||(33359043-33359123)
chr7 (1-80)||(42673624-42673702)
chr7 (60-150)||(43067812-43067908)
chr7 (60-150)||(48865885-48865981)
chr7 (1-73)||(17753763-17753834)
chr7 (1-76)||(12097549-12097623)
chr7 (1-80)||(15656075-15656153)
chr7 (1-76)||(24792291-24792365)
chr7 (1-76)||(43067932-43068006)
chr7 (59-150)||(933546-933643)
chr7 (60-150)||(24792167-24792263)
chr7 (60-150)||(25748745-25748841)
chr7 (81-150)||(37705178-37705247)
chr7 (78-151)||(42204440-42204513)
chr7 (1-73)||(9452753-9452824)
chr7 (1-81)||(33846483-33846562)
chr7 (59-152)||(42964830-42964929)
chr7 (59-151)||(22649530-22649628)
chr7 (1-72)||(22649657-22649727)
chr7 (1-76)||(25748650-25748724)
chr7 (1-72)||(42964959-42965029)
chr7 (59-150)||(9452850-9452947)
chr7 (59-150)||(17753861-17753958)
chr7 (59-150)||(38866805-38866902)
chr7 (60-150)||(12097436-12097532)
chr7 (81-150)||(12101027-12101096)
chr7 (1-73)||(42204318-42204389)
chr7 (1-72)||(933448-933518)
chr7 (1-76)||(7164347-7164421)
chr7 (59-150)||(16894348-16894445)
chr7 (60-150)||(7164445-7164540)
chr7 (81-150)||(33358940-33359009)
chr7 (3-72)||(38866709-38866777)
chr7 (81-150)||(42673737-42673806)
chr7 (1-73)||(46891301-46891372)
chr7 (1-71)||(32041705-32041774)
chr7 (59-141)||(46891188-46891276)
chr7 (1-72)||(4347436-4347505)
chr7 (1-72)||(8630829-8630899)
chr7 (1-74)||(48865796-48865866)
chr7 (81-139)||(33846390-33846448)
chr7 (5-73)||(16894469-16894536)
chr7 (46-82)||(37705109-37705145)
chr7 (100-150)||(3511622-3511672)
chr7 (1-61)||(30180998-30181057)
chr7 (100-142)||(15656208-15656250)
chr7 (1-42)||(3511486-3511527)
[»] chr1 (72 HSPs)
chr1 (1-150)||(46409599-46409747)
chr1 (1-150)||(2473884-2474031)
chr1 (1-150)||(15203274-15203422)
chr1 (1-148)||(49146334-49146486)
chr1 (1-141)||(26663420-26663565)
chr1 (3-147)||(43905818-43905967)
chr1 (1-150)||(6765621-6765775)
chr1 (1-123)||(7145369-7145496)
chr1 (1-150)||(15717946-15718100)
chr1 (1-150)||(40149625-40149779)
chr1 (1-82)||(970487-970567)
chr1 (1-112)||(23498622-23498738)
chr1 (60-150)||(1940594-1940690)
chr1 (1-82)||(29078678-29078758)
chr1 (1-82)||(39260309-39260389)
chr1 (1-82)||(52753110-52753190)
chr1 (1-80)||(8121031-8121109)
chr1 (59-150)||(41928355-41928452)
chr1 (1-82)||(52696953-52697033)
chr1 (1-76)||(13996692-13996766)
chr1 (1-80)||(17587470-17587548)
chr1 (1-76)||(19715130-19715204)
chr1 (1-79)||(25897536-25897613)
chr1 (60-150)||(15554002-15554098)
chr1 (1-73)||(17591850-17591921)
chr1 (1-76)||(15554121-15554195)
chr1 (1-72)||(20089633-20089703)
chr1 (1-76)||(33510646-33510720)
chr1 (1-80)||(46761128-46761206)
chr1 (59-150)||(13996573-13996670)
chr1 (59-150)||(14004687-14004784)
chr1 (1-82)||(29288311-29288389)
chr1 (6-80)||(38171986-38172059)
chr1 (59-150)||(40092756-40092853)
chr1 (1-71)||(42370769-42370838)
chr1 (72-150)||(52697057-52697135)
chr1 (60-150)||(33510744-33510839)
chr1 (81-150)||(52753007-52753076)
chr1 (1-73)||(1170416-1170487)
chr1 (1-69)||(16052258-16052325)
chr1 (1-76)||(1940716-1940790)
chr1 (1-72)||(2347819-2347889)
chr1 (1-76)||(8079678-8079752)
chr1 (1-76)||(26580239-26580313)
chr1 (1-72)||(38829231-38829301)
chr1 (81-139)||(970397-970455)
chr1 (59-150)||(2347917-2348014)
chr1 (59-150)||(19715010-19715107)
chr1 (59-150)||(26580119-26580216)
chr1 (81-139)||(39260218-39260276)
chr1 (93-150)||(16052386-16052443)
chr1 (81-150)||(29078792-29078861)
chr1 (81-150)||(29288423-29288492)
chr1 (1-73)||(5215547-5215618)
chr1 (59-150)||(17591947-17592045)
chr1 (1-72)||(41928468-41928538)
chr1 (100-150)||(8079558-8079608)
chr1 (81-150)||(1170294-1170363)
chr1 (27-80)||(23323032-23323084)
chr1 (1-69)||(40092653-40092720)
chr1 (81-141)||(46761242-46761302)
chr1 (100-150)||(1170759-1170810)
chr1 (1-72)||(32671741-32671810)
chr1 (100-150)||(5215693-5215743)
chr1 (1-71)||(12682982-12683051)
chr1 (92-150)||(38172106-38172164)
chr1 (59-150)||(51359077-51359173)
chr1 (93-150)||(22887997-22888054)
chr1 (72-137)||(23323111-23323176)
chr1 (44-76)||(14004806-14004838)
chr1 (47-76)||(1170656-1170685)
chr1 (93-150)||(8121156-8121213)
[»] chr4 (92 HSPs)
chr4 (1-150)||(37968640-37968788)
chr4 (1-148)||(53875819-53875971)
chr4 (1-150)||(1617246-1617400)
chr4 (1-132)||(40428615-40428751)
chr4 (1-147)||(6611240-6611391)
chr4 (1-150)||(30171742-30171895)
chr4 (1-150)||(44379064-44379218)
chr4 (1-150)||(23704086-23704240)
chr4 (1-150)||(9595779-9595933)
chr4 (1-150)||(30423442-30423595)
chr4 (1-147)||(20877209-20877360)
chr4 (1-82)||(23268997-23269077)
chr4 (1-150)||(48910008-48910162)
chr4 (46-150)||(28360603-28360713)
chr4 (1-82)||(2481359-2481439)
chr4 (1-82)||(23261837-23261917)
chr4 (1-82)||(31969843-31969923)
chr4 (1-82)||(54189707-54189787)
chr4 (59-150)||(52139457-52139554)
chr4 (59-150)||(53408280-53408377)
chr4 (59-141)||(8932033-8932121)
chr4 (60-150)||(27488482-27488578)
chr4 (60-150)||(35490610-35490706)
chr4 (1-82)||(53717415-53717495)
chr4 (1-80)||(45424487-45424565)
chr4 (59-150)||(44784755-44784852)
chr4 (1-147)||(50353963-50354115)
chr4 (59-150)||(55344534-55344631)
chr4 (1-82)||(14987954-14988034)
chr4 (3-76)||(43289917-43289989)
chr4 (81-150)||(53717314-53717383)
chr4 (78-150)||(23776309-23776381)
chr4 (1-73)||(27536064-27536135)
chr4 (90-150)||(37465006-37465066)
chr4 (78-150)||(50055429-50055501)
chr4 (1-76)||(1756721-1756795)
chr4 (1-72)||(6688588-6688658)
chr4 (1-76)||(8591049-8591123)
chr4 (1-76)||(27488605-27488679)
chr4 (1-80)||(33704003-33704080)
chr4 (1-76)||(35490730-35490804)
chr4 (1-76)||(37464883-37464957)
chr4 (1-76)||(38055319-38055393)
chr4 (1-76)||(50055307-50055381)
chr4 (1-72)||(53408182-53408252)
chr4 (72-150)||(2481256-2481334)
chr4 (59-150)||(6688464-6688561)
chr4 (60-139)||(19164822-19164907)
chr4 (59-150)||(38071166-38071263)
chr4 (81-150)||(54189821-54189890)
chr4 (1-73)||(15240988-15241059)
chr4 (1-73)||(16700943-16701014)
chr4 (1-73)||(19913590-19913661)
chr4 (1-73)||(44784877-44784948)
chr4 (1-72)||(11639539-11639609)
chr4 (1-72)||(28032673-28032743)
chr4 (1-72)||(47632197-47632267)
chr4 (59-150)||(8590928-8591025)
chr4 (81-147)||(14988067-14988133)
chr4 (59-150)||(15240862-15240959)
chr4 (59-150)||(15669442-15669539)
chr4 (59-150)||(16701040-16701137)
chr4 (1-71)||(27583594-27583663)
chr4 (59-150)||(38055419-38055516)
chr4 (1-71)||(40680000-40680069)
chr4 (60-147)||(43289800-43289892)
chr4 (59-150)||(47632295-47632392)
chr4 (81-150)||(23261734-23261803)
chr4 (81-150)||(23268894-23268963)
chr4 (81-150)||(33704115-33704184)
chr4 (81-150)||(45424382-45424451)
chr4 (1-78)||(54412790-54412866)
chr4 (1-74)||(55344784-55344856)
chr4 (1-73)||(19164933-19165004)
chr4 (1-76)||(53353225-53353299)
chr4 (59-150)||(27535944-27536040)
chr4 (1-73)||(38071286-38071354)
chr4 (93-150)||(28032546-28032603)
chr4 (81-150)||(44376830-44376899)
chr4 (1-73)||(15669345-15669416)
chr4 (59-150)||(19913467-19913563)
chr4 (60-150)||(1756602-1756697)
chr4 (81-150)||(31969957-31970026)
chr4 (1-69)||(8932142-8932209)
chr4 (110-150)||(30171931-30171971)
chr4 (81-139)||(54412904-54412962)
chr4 (10-72)||(55344654-55344715)
chr4 (1-69)||(23776423-23776490)
chr4 (15-136)||(34615934-34616049)
chr4 (44-80)||(44376043-44376079)
chr4 (1-67)||(52139365-52139428)
chr4 (3-43)||(48748222-48748262)
[»] chr3 (61 HSPs)
chr3 (1-150)||(54534209-54534357)
chr3 (1-150)||(53028376-53028530)
chr3 (1-147)||(25494163-25494314)
chr3 (1-147)||(42104849-42105000)
chr3 (1-150)||(13696952-13697106)
chr3 (7-147)||(34700506-34700651)
chr3 (1-150)||(35226606-35226759)
chr3 (1-79)||(12117610-12117687)
chr3 (60-150)||(35643430-35643526)
chr3 (1-82)||(21581201-21581281)
chr3 (1-82)||(22174939-22175019)
chr3 (1-82)||(42307854-42307934)
chr3 (1-81)||(37698093-37698172)
chr3 (1-76)||(15520097-15520171)
chr3 (1-80)||(20842299-20842377)
chr3 (1-80)||(44609284-44609362)
chr3 (1-76)||(48924958-48925032)
chr3 (1-80)||(50529088-50529166)
chr3 (1-82)||(15520795-15520875)
chr3 (1-82)||(25999547-25999627)
chr3 (81-150)||(42307751-42307820)
chr3 (60-150)||(48924838-48924934)
chr3 (1-73)||(38934104-38934175)
chr3 (1-72)||(8042766-8042836)
chr3 (81-152)||(21581314-21581385)
chr3 (1-76)||(46452117-46452191)
chr3 (1-72)||(50528841-50528911)
chr3 (1-76)||(54870129-54870203)
chr3 (59-150)||(8042864-8042961)
chr3 (1-79)||(24366188-24366265)
chr3 (59-150)||(38934203-38934300)
chr3 (59-150)||(50528717-50528814)
chr3 (81-150)||(2895462-2895531)
chr3 (93-150)||(15519982-15520039)
chr3 (1-82)||(20699308-20699388)
chr3 (1-82)||(29445647-29445727)
chr3 (81-150)||(29445761-29445830)
chr3 (60-150)||(46451996-46452092)
chr3 (93-150)||(54870011-54870068)
chr3 (1-76)||(38856252-38856326)
chr3 (72-150)||(15520900-15520978)
chr3 (72-150)||(20699413-20699491)
chr3 (72-150)||(22174836-22174914)
chr3 (1-75)||(24835655-24835728)
chr3 (59-150)||(32244372-32244469)
chr3 (59-142)||(44689017-44689106)
chr3 (11-80)||(2895358-2895426)
chr3 (81-150)||(12117506-12117575)
chr3 (81-150)||(20842194-20842263)
chr3 (81-150)||(25999661-25999730)
chr3 (1-73)||(16354505-16354576)
chr3 (92-150)||(16354643-16354701)
chr3 (59-150)||(32359508-32359605)
chr3 (72-150)||(50529193-50529271)
chr3 (60-150)||(38856350-38856445)
chr3 (1-72)||(32359418-32359488)
chr3 (1-72)||(44688919-44688989)
chr3 (81-139)||(37698000-37698058)
chr3 (78-121)||(24366298-24366341)
chr3 (100-137)||(44609197-44609234)
chr3 (1-78)||(26122973-26123049)
[»] chr8 (53 HSPs)
chr8 (1-150)||(5320728-5320876)
chr8 (1-142)||(34842268-34842408)
chr8 (1-150)||(39218941-39219089)
chr8 (45-150)||(882976-883081)
chr8 (1-150)||(41575677-41575831)
chr8 (1-150)||(42571755-42571909)
chr8 (1-142)||(144558-144704)
chr8 (1-147)||(39206750-39206899)
chr8 (7-141)||(33286935-33287074)
chr8 (6-150)||(28639451-28639597)
chr8 (1-150)||(38167045-38167198)
chr8 (1-73)||(7812159-7812230)
chr8 (1-81)||(18594701-18594780)
chr8 (1-76)||(6144242-6144316)
chr8 (1-76)||(14422867-14422941)
chr8 (1-76)||(33278564-33278638)
chr8 (1-80)||(36491321-36491399)
chr8 (60-150)||(9807520-9807615)
chr8 (60-150)||(13110666-13110761)
chr8 (1-73)||(7791575-7791646)
chr8 (1-73)||(24113138-24113209)
chr8 (59-140)||(29938601-29938688)
chr8 (1-73)||(34998868-34998939)
chr8 (1-76)||(13110568-13110642)
chr8 (60-152)||(33278662-33278760)
chr8 (1-73)||(7774928-7774998)
chr8 (60-150)||(8021973-8022068)
chr8 (60-150)||(34679308-34679404)
chr8 (1-73)||(2042496-2042567)
chr8 (59-152)||(44804791-44804890)
chr8 (1-76)||(4036011-4036085)
chr8 (1-72)||(22260603-22260673)
chr8 (1-68)||(29938225-29938291)
chr8 (1-72)||(35118004-35118074)
chr8 (59-150)||(24113015-24113112)
chr8 (59-142)||(35117888-35117977)
chr8 (60-150)||(4036111-4036207)
chr8 (1-69)||(10836731-10836798)
chr8 (60-150)||(34998746-34998843)
chr8 (1-72)||(44804917-44804987)
chr8 (59-142)||(2042382-2042471)
chr8 (59-150)||(10836601-10836698)
chr8 (59-150)||(22260478-22260575)
chr8 (1-71)||(34679431-34679500)
chr8 (93-150)||(6144123-6144180)
chr8 (1-76)||(9807424-9807496)
chr8 (81-150)||(36491435-36491504)
chr8 (72-152)||(7812759-7812839)
chr8 (1-76)||(8021875-8021949)
chr8 (81-139)||(18594815-18594873)
chr8 (81-147)||(7792166-7792232)
chr8 (114-150)||(14422973-14423009)
chr8 (1-43)||(66180-66222)
[»] chr5 (44 HSPs)
chr5 (1-152)||(31410641-31410791)
chr5 (1-147)||(1165493-1165644)
chr5 (1-82)||(27679132-27679212)
chr5 (1-150)||(27025121-27025275)
chr5 (1-82)||(26602905-26602985)
chr5 (1-82)||(35782607-35782687)
chr5 (60-150)||(27421121-27421217)
chr5 (1-82)||(33491159-33491239)
chr5 (1-81)||(24105635-24105714)
chr5 (1-76)||(16069518-16069592)
chr5 (1-76)||(16737416-16737490)
chr5 (1-72)||(19358691-19358761)
chr5 (1-76)||(31883309-31883383)
chr5 (60-150)||(35420273-35420368)
chr5 (59-150)||(19358788-19358885)
chr5 (3-76)||(3921748-3921820)
chr5 (59-141)||(4121198-4121286)
chr5 (60-141)||(8374198-8374285)
chr5 (1-73)||(33991305-33991376)
chr5 (1-76)||(1579201-1579275)
chr5 (1-76)||(1605540-1605614)
chr5 (1-76)||(35420393-35420467)
chr5 (59-150)||(3386335-3386432)
chr5 (81-150)||(27679029-27679098)
chr5 (81-150)||(33491056-33491125)
chr5 (1-73)||(4121102-4121173)
chr5 (59-147)||(9007907-9008001)
chr5 (1-76)||(27421023-27421097)
chr5 (60-146)||(1579299-1579390)
chr5 (60-146)||(1605425-1605516)
chr5 (60-150)||(3921844-3921940)
chr5 (81-142)||(26602811-26602872)
chr5 (81-150)||(35782505-35782574)
chr5 (1-73)||(8374311-8374381)
chr5 (78-150)||(16069640-16069712)
chr5 (60-141)||(33991395-33991482)
chr5 (1-72)||(3386459-3386529)
chr5 (1-72)||(9008030-9008100)
chr5 (1-72)||(20992119-20992189)
chr5 (1-76)||(38598419-38598493)
chr5 (60-150)||(16737296-16737392)
chr5 (81-139)||(24105542-24105600)
chr5 (93-150)||(38598297-38598354)
chr5 (1-66)||(5203137-5203200)
[»] chr2 (35 HSPs)
chr2 (1-150)||(6174723-6174871)
chr2 (1-150)||(19901027-19901181)
chr2 (1-150)||(19383828-19383978)
chr2 (3-147)||(16066186-16066335)
chr2 (1-150)||(429978-430132)
chr2 (1-150)||(851159-851312)
chr2 (1-150)||(44947439-44947592)
chr2 (81-150)||(31517075-31517144)
chr2 (1-150)||(39635614-39635768)
chr2 (1-80)||(2178734-2178812)
chr2 (1-72)||(26323159-26323229)
chr2 (3-82)||(31517178-31517256)
chr2 (1-76)||(42937882-42937956)
chr2 (59-150)||(26323033-26323130)
chr2 (1-82)||(28329802-28329882)
chr2 (60-141)||(1482766-1482853)
chr2 (1-73)||(4016201-4016272)
chr2 (1-73)||(30270651-30270722)
chr2 (1-72)||(3873217-3873287)
chr2 (1-72)||(18806857-18806927)
chr2 (59-150)||(3873090-3873187)
chr2 (1-73)||(5733561-5733632)
chr2 (59-150)||(33905896-33905993)
chr2 (59-150)||(42937981-42938078)
chr2 (81-149)||(28329700-28329768)
chr2 (59-150)||(1109526-1109623)
chr2 (59-141)||(4016297-4016386)
chr2 (1-71)||(4232116-4232185)
chr2 (81-150)||(5733686-5733755)
chr2 (59-141)||(18806738-18806826)
chr2 (3-72)||(33906020-33906088)
chr2 (81-150)||(2178630-2178699)
chr2 (1-65)||(30420159-30420222)
chr2 (3-71)||(16588750-16588817)
chr2 (1-65)||(1482883-1482946)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-150)||(145134-145288)
[»] scaffold0012 (2 HSPs)
scaffold0012 (1-82)||(36867-36947)
scaffold0012 (81-150)||(36982-37051)
[»] scaffold0482 (1 HSPs)
scaffold0482 (1-73)||(267-338)
[»] scaffold0444 (1 HSPs)
scaffold0444 (81-150)||(24-93)
[»] scaffold0172 (2 HSPs)
scaffold0172 (1-73)||(10400-10471)
scaffold0172 (59-150)||(10497-10594)
[»] scaffold0920 (2 HSPs)
scaffold0920 (1-72)||(3872-3942)
scaffold0920 (93-147)||(4009-4063)
[»] scaffold1777 (1 HSPs)
scaffold1777 (1-43)||(7-49)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-43)||(7-49)


Alignment Details
Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 35198447 - 35198596
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35198447 acaaggaacttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatctttggcggtgcataa 35198546  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35198547 gtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 35198596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 34887335 - 34887217
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataa 100  Q
    |||||||||| |||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34887335 acaaggagctaatgaatttatgtgacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataattatctttggcggtgcataa 34887237  T
Q  101 gtaacaaaattgttatatac 120  Q
    |||||||||||| |||||||    
T  34887236 gtaacaaaattgctatatac 34887217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 21893619 - 21893773
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||      |||| |||||| ||    
T  21893619 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatgttagttatctttggcagt 21893717  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| |||||||||||||||||||| ||||||||||||| |||||||| |||||||    
T  21893718 gcatgagtaacaaaattgttatatatttatcttactaaattaacacacgtaactaa 21893773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 16307051 - 16306897
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||||||||||| | ||| ||||||||||||||||||||||||||||||||||||      |||| ||| |||||    
T  16307051 acaaggagcttatgaatttatgtaacctcattcgattatttct-ggatccactttttcaaaacatatattttaattataatgttagttatcttttgcggt 16306953  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
     ||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  16306952 acatgagtaacaaaattgctatatacttatcttactaaagtaacacacctaactaa 16306897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 28199551 - 28199406
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||| |||||||||||||||||||||||||||      |||| ||||| |||    
T  28199551 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccac-ttttcaaaacatatattttaattataatgttagttatctttggtggt 28199454  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacac 142  Q
    ||||  |||||||||||| |||||||||||||||||||||||||||||    
T  28199453 gcatgtgtaacaaaattgctatatacttatcttactaaagtaacacac 28199406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6086642 - 6086562
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6086642 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 6086562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 30692015 - 30692095
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30692015 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 30692095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 30698972 - 30698819
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    |||| |||||||||||||||||| | ||| ||||||||| | ||||||||||||||||||||||||||||||||||||||      |||| |||||| ||    
T  30698972 acaatgagcttatgaatttatgtaacctccttcgattcttt-ttggatccactttttcaaaacatatattttaattataatgttagttatctttggcagt 30698874  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
      |  ||||||||||||||||||||  |||||||||||| |||||||| |||||||    
T  30698873 -aagtagtaacaaaattgttatatatctatcttactaaattaacacacgtaactaa 30698819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2837709 - 2837789
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  2837709 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggagccactttttcaaaacatatattttaattataatt 2837789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 20727049 - 20727145
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  20727049 aaacatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaattgctatatacttatcttaccaaagtaacacacataactaa 20727145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 53072 - 53151
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataat 81  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  53072 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggaaccactttttcaaaacatatattttaattataat 53151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 1153857 - 1153954
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  1153857 aaaacatatattttaattataatgttagttatctttggtggtgcatgagtaacaaaattgttatatacttatcttactaaagtaacacatgtaactaa 1153954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26704382 - 26704302
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  26704382 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccacttttccaaaacatatatttaaattataatt 26704302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3347566 - 3347495
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  3347566 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttta 3347495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18613702 - 18613773
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  18613702 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttta 18613773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26946919 - 26946848
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  26946919 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttta 26946848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33464493 - 33464564
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  33464493 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttta 33464564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3955809 - 3955732
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||   |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3955809 acaaggagcttatgaatttatgtaacct---tcgattctctct-ggatccactttttcaaaacatatattttaattataatt 3955732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 11167404 - 11167474
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||||||||||||    
T  11167404 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttt 11167474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 20726951 - 20727025
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||| |||||||||||||||||||||||||||||    
T  20726951 acaaggagcttatgaatttatgtaacctccttcgattctctc-tgggtccactttttcaaaacatatattttaatt 20727025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 18613799 - 18613896
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||| ||||||||||||||||||||||| |||||  |||||||||||||||||||||| |||||||    
T  18613799 aaaacatatattttaattataatgttagttatctttagcggtgcataagtaacaaaattgctatatgtttatcttactaaagtaacacacgtaactaa 18613896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 6086527 - 6086458
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| || |||||||    
T  6086527 ttatctttggcggtgcatcagtaacaaaattgctatatacttatcttactaaagtaacaaacgtaactaa 6086458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 26704269 - 26704200
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  26704269 ttatctttggcggtgcatgagtaacaaaattgttatatacttatcttattgaagtaacacacgtaactaa 26704200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9459727 - 9459797
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    |||||||||||||||||||||||   ||| ||||||||||||| ||||||||||||||||||||||||||||    
T  9459727 acaaggagcttatgaatttatgtatcctccttcgattctctct-ggatccactttttcaaaacatatatttt 9459797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 3347476 - 3347379
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||| ||||||||      ||| ||| ||||||||||||||||||||||| |||||  |||||||||||||||||||||| |||||||    
T  3347476 aaaacatatatttttattataatgttagttatctttagcggtgcataagtaacaaaattgctatatgtttatcttactaaagtaacacacgtaactaa 3347379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 30692129 - 30692187
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaaca 139  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  30692129 ttatttttggcggtgcatcagtaacaaaattgctatatacttatcttactaaagtaaca 30692187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 33464589 - 33464685
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||| ||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  33464589 aaaacatatattttaattataatgttagttatctttagcggtgcatgagtaacaaaattgatatatacttatcttact-aagtaacacacgtaactaa 33464685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 2837823 - 2837892
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| | ||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  2837823 ttatctttggcggtgcatcaataacaaaattgctatatacttatcttattaaagtaacaaacataactaa 2837892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 26946782 - 26946729
Alignment:
Q  93 gtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataa 146  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  26946782 gtgcatgagtaacaaaattgttatatacttatcttaccaaagtaacacacataa 26946729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 3955688 - 3955629
Alignment:
Q  91 cggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| || |||||||    
T  3955688 cggtgcatcagtaacaaaattgctatatacttatcttactaaagtaacaaacgtaactaa 3955629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 149
Target Start/End: Original strand, 11167503 - 11167599
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataacta 149  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||| | |||||| |||||||||||||||||||||| ||||||    
T  11167503 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaatggctatatatttatcttactaaagtaacacacgtaacta 11167599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1153757 - 1153828
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    |||||| ||||||| |||||||| | ||| |||| |||||||| |||||||||||||||||||||||||||||    
T  1153757 acaaggtgcttatgtatttatgtaacctccttcgtttctctct-ggatccactttttcaaaacatatatttta 1153828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 53186 - 53244
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaaca 139  Q
    |||| ||||||||||||| || ||| |||||  ||||||||||||||||||||||||||    
T  53186 ttatctttggcggtgcatcagaaacgaaattactatatacttatcttactaaagtaaca 53244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17261116 - 17261051
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatat 67  Q
    ||||||| ||||||||||||||| | ||| |||||||||||| ||||||| |||||| |||||||||    
T  17261116 acaaggaacttatgaatttatgtaacctccttcgattctctc-tggatccccttttttaaaacatat 17261051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 2e-60; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 6394914 - 6395062
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataa 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  6394914 acaaggagcttatgaatttatgtgacctccttcgattctctct-ggagccactttttccaaacatatattttaattataattatctttggcggtgcataa 6395012  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6395013 gtaacaaaattgttatatacttatcttactaaagtaacacacgtaactaa 6395062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 4477354 - 4477206
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataa 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  4477354 acaaggagcttatgaatttatgtgacctccttcgattctctct-ggagccactttttccaaacatatattttaattataattatctttggcggtgcataa 4477256  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  4477255 gtaacaaaattgttatatacttatcttactaaagtaacacatgtaactaa 4477206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 20346651 - 20346799
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataa 100  Q
    ||||||||||||||||||||||  | ||| ||||||||||||| | ||||||||||||||||||| |||||||||||||||||| ||||||| |||||||    
T  20346651 acaaggagcttatgaatttatgaaacctccttcgattctctct-gaatccactttttcaaaacatttattttaattataattatctttggcgatgcataa 20346749  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||| |||||||||||||||||||| |||||||| |||||||    
T  20346750 gtaacaaaattgctatatacttatcttactaaattaacacacgtaactaa 20346799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 46134337 - 46134183
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataat------tatatttggcggt 94  Q
    ||||||||||||| ||||||||| | ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||      ||| |||||||||    
T  46134337 acaaggagcttattaatttatgtaacctcattcgattctctct-ggatgcactttttcaaaacatatattttaattataatgttagttatctttggcggt 46134239  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  46134238 gcatgagtaacaaaattgttatatacttatcttactaaagtaacacacgtaactaa 46134183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 43021613 - 43021458
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||      |||| |||||||||    
T  43021613 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatgttagttatctttggcggt 43021515  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaaaa 152  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||    
T  43021514 gcatgagtaacaaaattg-tatatacttatcttactaaagtaacacacgtaattaaaa 43021458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 36890863 - 36890708
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccacttttt-caaaacatatattttaattataat------tatatttggcgg 93  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| | ||||||||||| ||||||||||||||||||||||||      ||| |||| |||    
T  36890863 acaaggagcttatgaatttatgtaacctccttcgattctctctag-atccacttttttcaaaacatatattttaattataatgttagttatctttgacgg 36890765  T
Q  94 tgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36890764 tgcaggagtaacaaaattgttatatacttatcttactaaagtaacacacgtaactaa 36890708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 5281023 - 5281163
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||| |||||||||||||||||||||||||||      |||| |||||||||    
T  5281023 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccac-ttttcaaaacatatattttaattataatgttagttatctttggcggt 5281120  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaa 137  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  5281121 gcatgagtaacaaaattgctatatacttatcttactaaagtaa 5281163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 1803189 - 1803338
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||| ||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||      |||| ||| |||||    
T  1803189 acaagaagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatgttagttatctttagcggt 1803287  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    |||||  |||||||||||||||||||||||||||||||| |||||||| ||||    
T  1803288 gcata--taacaaaattgttatatacttatcttactaaattaacacacgtaac 1803338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 43156884 - 43157028
Alignment:
Q  9 cttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataat------tatatttggcggtgcataagt 102  Q
    ||||||||||||||| | ||| ||||||||||||  |||||||||||| ||||||||||||||||||||||||      ||| |||||||||||||| ||    
T  43156884 cttatgaatttatgtaacctccttcgattctctcc-ggatccactttt-caaaacatatattttaattataatattagttatctttggcggtgcata-gt 43156980  T
Q  103 aacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||  ||||||||||||||||||||||||||||  |||||||    
T  43156981 aacaaaattcctatatacttatcttactaaagtaacacatgtaactaa 43157028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12101211 - 12101131
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12101211 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 12101131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 33359123 - 33359043
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33359123 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 33359043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42673624 - 42673702
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa 80  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42673624 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataa 42673702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 43067908 - 43067812
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  43067908 aaacatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaattgttatatacttatcttaccaaagaaacacacataactaa 43067812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 48865885 - 48865981
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  48865885 aaacatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaattgttatatacttattttaccaaagtaacacacataactaa 48865981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 17753763 - 17753834
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  17753763 acaaggagcttatgaatttatgtaatctccttcgattctctc-tggatccactttttcaaaacatatatttta 17753834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 12097623 - 12097549
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  12097623 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 12097549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15656075 - 15656153
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa 80  Q
    ||||| ||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15656075 acaagaagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataa 15656153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 24792365 - 24792291
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  24792365 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 24792291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 43068006 - 43067932
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  43068006 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 43067932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 933546 - 933643
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  933546 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgttatatacttatcttactaaagtaacacacgtaactaa 933643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 24792263 - 24792167
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| |||| |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  24792263 aaacatatattttaattataatgttagttatctttgacggtgcatgagtaacaaaattgttatatatttatcttaccaaagtaacacacataactaa 24792167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 25748745 - 25748841
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| |||| ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  25748745 aaacatatattttaattataatgttagttatctttgacggtgtataagtatcaaaattgttatatacttatcttaccaaagtaacacacataactaa 25748841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 37705178 - 37705247
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  37705178 ttatctttggcggtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacacgtaactaa 37705247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 42204440 - 42204513
Alignment:
Q  78 taattatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaaa 151  Q
    ||||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  42204440 taattatctttggtggtgcatgagtaacaaaattgatatatacttatcttactaaagtaacacacgtaactaaa 42204513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9452753 - 9452824
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  9452753 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttta 9452824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 33846562 - 33846483
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataat 81  Q
    ||||||||||||||||||||||| | ||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||    
T  33846562 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggaaccactttttcaagacatatattttaattataat 33846483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 42964929 - 42964830
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaaaa 152  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  42964929 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacacgtaactaaaa 42964830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 59 - 151
Target Start/End: Complemental strand, 22649628 - 22649530
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaaa 151  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  22649628 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacacgtaactaaa 22649530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22649727 - 22649657
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||||||||||| |||| |||||||||||||||||||||||||||||    
T  22649727 acaaggagcttatgaatttatgtaacctcattcgattttctc-tggatccactttttcaaaacatatatttt 22649657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 25748650 - 25748724
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  25748650 acaaggagcttatgaatttatgtaacctccttcgattatctct-ggatccactttttcaaaacatatattttaatt 25748724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 42965029 - 42964959
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||||||||||||    
T  42965029 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttt 42964959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 9452850 - 9452947
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  9452850 aaaacatatattttaattataatgttagttatctttgctggtgcatgagtaacaaaattgttatatacttatcttactaaagtaacacatgtaactaa 9452947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 17753861 - 17753958
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||||||||||||| |||||||||| || ||||||||||||||||||||||||||||  |||||||    
T  17753861 aaaacatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaagtgctatatacttatcttactaaagtaacacatgtaactaa 17753958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 38866805 - 38866902
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  38866805 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacacgtaactaa 38866902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 12097532 - 12097436
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||  ||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  12097532 aaacatatattttaattataatgttagttatctttgatggtgcatgagtaacaaaattgttatatacttatcttaccaaaataacacacataactaa 12097436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 12101096 - 12101027
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| || |||||||    
T  12101096 ttatctttggcggtgcatcagtaacaaaattgctatatacttatcttactaaagtaacaaacgtaactaa 12101027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42204318 - 42204389
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||  | ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  42204318 acaaggagcttatgaatttatgcaacctccttcgattctctct-ggatccactttttcaaaacatatatttta 42204389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 933448 - 933518
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  933448 acaaggagcttatgaatttatgtaacctccttcgaatctctct-ggatccactttttcaaaacatatatttt 933518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 7164347 - 7164421
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||| ||| | ||||||||||||||||||||||||||||||    
T  7164347 acaaggagcttatgaatttatgtaacctctttcgattctatct-gaatccactttttcaaaacatatattttaatt 7164421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 16894445 - 16894348
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||| | ||||||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  16894445 aaaacatatattttaattataatgttagttatctttagtggtgcatgagtaacaaaattgatatatacttatcttactaaagtaacacatgtaactaa 16894348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 7164445 - 7164540
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||| ||||| ||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  7164445 aaacatatattttaattataatgttagttatttttggcg-tgcatgagtaacaaaattgatatatacttatcttaccaaagtaacacacgtaactaa 7164540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 33359009 - 33358940
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| |||||||||| || ||||||||||||| |||||||||||||||||||||||||| || |||||||    
T  33359009 ttatctttggcggtgtatcagtaacaaaattgctatatacttatcttactaaagtaacaaacgtaactaa 33358940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 38866709 - 38866777
Alignment:
Q  3 aaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||| | ||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  38866709 aaggagcttatgaatttatgtaacctccttcgattatctct-ggatccactttttcaaaacatatatttt 38866777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 42673737 - 42673806
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||| | || |||||||    
T  42673737 ttatcttttgcggtgcatgagtaacaaaattgttatatacttatcttactaaagtaatatacctaactaa 42673806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 46891372 - 46891301
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||| ||||||| | ||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  46891372 acaaggagcttatgagtttatgtaacctccttcgattgtctct-ggatccactttttcaaaacatatatttta 46891301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32041705 - 32041774
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattt 71  Q
    ||||||||||||| ||||||||| | || ||||||||||||| || |||||||||||||||||||||||||    
T  32041705 acaaggagcttataaatttatgtaaccttattcgattctctc-tgaatccactttttcaaaacatatattt 32041774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 46891276 - 46891188
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacaca 141  Q
    |||||||||||||||||||||||      ||| |||||||||| || ||| | ||||||||||||||||||| ||||||||||||||||    
T  46891276 aaaacatatattttaattataatgttagttatctttggcggtggatgagtgataaaattgttatatacttattttactaaagtaacaca 46891188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 4347436 - 4347505
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | | | ||| ||||||||| ||||||||||||||||||||||||||||    
T  4347436 acaaggagcttatgaatttatgtaacccc-ttctattctctct-ggatccactttttcaaaacatatatttt 4347505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 8630829 - 8630899
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    |||| |||||||||||||||||| ||| | |||||||||||| |||||| ||||||||||||||||| ||||    
T  8630829 acaaagagcttatgaatttatgtaatccccttcgattctctc-tggatcaactttttcaaaacatatttttt 8630899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48865796 - 48865866
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaa 74  Q
    ||||||||||||||||||||||| | ||| ||||||||||||   |||||| |||| |||||||||||||||||    
T  48865796 acaaggagcttatgaatttatgtaacctccttcgattctctc---gatccatttttccaaaacatatattttaa 48865866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 33846448 - 33846390
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaaca 139  Q
    |||| ||||||||||||| |||||| |||||  ||||||||||||||||||||||||||    
T  33846448 ttatctttggcggtgcatcagtaacgaaattactatatacttatcttactaaagtaaca 33846390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 16894536 - 16894469
Alignment:
Q  5 ggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||| |  || ||||||||| ||| ||||||||||||||||||||| |||||||    
T  16894536 ggagcttatgaatttatgtaacatccttcgattctttct-ggatccactttttcaaaacatttatttta 16894469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 37705109 - 37705145
Alignment:
Q  46 gatccactttttcaaaacatatattttaattataatt 82  Q
    |||||||||||||||||||||||||||||||||||||    
T  37705109 gatccactttttcaaaacatatattttaattataatt 37705145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 3511622 - 3511672
Alignment:
Q  100 agtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| |||||||| |||||||||||||||||||||||||| || |||||||    
T  3511622 agtagcaaaattgctatatacttatcttactaaagtaacatacgtaactaa 3511672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30181057 - 30180998
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaa 61  Q
    ||||||| ||||||||||||||| | | | |||||||||||| ||||||||||||||||||    
T  30181057 acaaggaacttatgaatttatgtaacccccttcgattctctc-tggatccactttttcaaa 30180998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 142
Target Start/End: Original strand, 15656208 - 15656250
Alignment:
Q  100 agtaacaaaattgttatatacttatcttactaaagtaacacac 142  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||    
T  15656208 agtaacaaaattgctatatacgtatcttactaatgtaacacac 15656250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3511486 - 3511527
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctc 42  Q
    ||||||||||||||||||||||| | ||| ||||||||||||    
T  3511486 acaaggagcttatgaatttatgtaacctccttcgattctctc 3511527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 2e-60; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 46409599 - 46409747
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataa 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  46409599 acaaggagcttatgaatttatgtgacctccttcgattctctct-ggatccactttttcaaaacatatattttcattataattatctttggcggtgcataa 46409697  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  46409698 gtaacaaaattgctatatacttatcttactaaagtaacacacgtaactaa 46409747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 2473884 - 2474031
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataa 100  Q
    ||||||||||||||||||||||| | ||| ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  2473884 acaaggagcttatgaatttatgttacctccttcgagtctct-ttggatccacattttcaaaacatatattttaattataattatctttggcggtgcataa 2473982  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||| |||||| ||||||||||||| |||||||| |||||||    
T  2473983 gtaacaaaattgctatatagttatcttactaaa-taacacacgtaactaa 2474031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 15203274 - 15203422
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataa 100  Q
    ||||||||||||||||||||||| | ||  ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||| ||||| |||    
T  15203274 acaaggagcttatgaatttatgtaaccttcttcgattctctct-ggatccactttttcaaaacatatgttttaattataattatctttggtggtgcttaa 15203372  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
     ||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  15203373 ataacaaaattgctatatacttatcttactaaagtaacacaggtaactaa 15203422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 49146334 - 49146486
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    |||| |||||||||||||||||| |  |||||||||||||||| ||||||||||||||||||| ||||||||||||||||      |||||||| |||||    
T  49146334 acaaagagcttatgaatttatgtaacgtcattcgattctctct-ggatccactttttcaaaacttatattttaattataatgttagttatatttagcggt 49146432  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataact 148  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  49146433 gcatgagtaacaaaattgctatatacttatcttactaaagtaacacacgtaact 49146486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 26663420 - 26663565
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||      |||| ||| |||||    
T  26663420 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccattttttcaaaacatatattttaattataatgttagttatctttagcggt 26663518  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacaca 141  Q
    |||| ||||||||||||||||||||||| |||||||||| |||||||    
T  26663519 gcatgagtaacaaaattgttatatacttgtcttactaaattaacaca 26663565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 43905818 - 43905967
Alignment:
Q  3 aaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggtgc 96  Q
    |||||||||||||||||| || | ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||      |||| ||| |||||||    
T  43905818 aaggagcttatgaatttacgtaacctccttcgattgtctct-ggatccactttttcaaaacatatattttaattataatgttagttatctttagcggtgc 43905916  T
Q  97 ataagtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    || |||||||||||||||||||||||||||||||||| |||||||| ||||    
T  43905917 atgagtaacaaaattgttatatacttatcttactaaattaacacacgtaac 43905967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 6765621 - 6765775
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    |||||||| |||||||||||||| ||||| ||||||||| ||| | ||||||||||| ||||||||||||||||||||||      |||| ||||||  |    
T  6765621 acaaggagtttatgaatttatgtaatctccttcgattctatctcg-atccacttttttaaaacatatattttaattataatgttagttatctttggcaat 6765719  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  6765720 gcatgagtaacaaaattgttatatacttatcttactaaattaacacacgtaactaa 6765775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 7145369 - 7145496
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||      ||||||||||||||    
T  7145369 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatatattaattataatgttagttatatttggcggt 7145467  T
Q  95 gcataagtaacaaaattgttatatactta 123  Q
     ||||||||||||||||| ||||||||||    
T  7145468 acataagtaacaaaattgctatatactta 7145496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 15717946 - 15718100
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||| ||||||| | ||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||      |||| |||| |  |    
T  15717946 acaaggagcttatgattttatgtaacctccttcaattctct-ttggatccactttttcaaaacatatattttaattataatgttagttatctttgacaat 15718044  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||| |||||||    
T  15718045 gcatgagtaacaaaattgctatatacttatcttactaaattaacacacgtaactaa 15718100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 40149625 - 40149779
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| |||||||||||| || ||||||||||||||||||||||| ||||||||||      |||| |||||| ||    
T  40149625 acaaggagcttatgaatttatgtaacctccttcgattctctc-tgaatccactttttcaaaacatatatattaattataatgttggttatctttggcagt 40149723  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
     ||| ||||||||||||| ||||||||||||||| |||| |||||||| |||||||    
T  40149724 acatgagtaacaaaattgatatatacttatcttattaaattaacacacgtaactaa 40149779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 970567 - 970487
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  970567 acaaggagcttatgaatttatgtaatctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 970487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 23498622 - 23498738
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||      |||| |||  ||||    
T  23498622 acaaggagcttatgaatttatgtaacctctttcgattctctct-ggatccactttttcaaaacatatattttaattataatgttagttatcttttacggt 23498720  T
Q  95 gcataagtaacaaaattg 112  Q
    ||||||||||||||||||    
T  23498721 gcataagtaacaaaattg 23498738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 1940690 - 1940594
Alignment:
Q  60 aaacatatattttaattataatt------atatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      || ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  1940690 aaacatatattttaattataattttggttatctttggcggtgcataagtaacaaaattgctatatacttatcttaccaaagtaacacacataactaa 1940594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29078678 - 29078758
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29078678 acaaggagcttatgaatttatgtaacctccttcgattctctcttg-atccactttttcaaaacatatattttaattataatt 29078758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 39260389 - 39260309
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39260389 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 39260309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 52753190 - 52753110
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  52753190 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 52753110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8121031 - 8121109
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa 80  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8121031 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataa 8121109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 41928452 - 41928355
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  41928452 aaaacatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaattgttatatacttatcttactaaagtaacacatttaactaa 41928355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 52696953 - 52697033
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  52696953 acaaggagcttatgaatttatgtaacctccttcgattatctct-ggatccactttttcaaaacatatattttaattataatt 52697033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13996766 - 13996692
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    |||||||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13996766 acaaggagtttatgaatttatgtaacctcattcgattctctct-ggatccactttttcaaaacatatattttaatt 13996692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 17587548 - 17587470
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa 80  Q
    ||||||||||||||||||||||| | ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  17587548 acaaggagcttatgaatttatgtaacctccttcgattctttct-ggatccactttttcaaaacatatattttaattataa 17587470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 19715204 - 19715130
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  19715204 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 19715130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25897536 - 25897613
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattata 79  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  25897536 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaatatatattttaattata 25897613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 15554098 - 15554002
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| |||| |||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  15554098 aaacatatattttaattataatgttagttatctttgacggtgcatgagtaacaaaatttttatatacttatcttactaaaataacacacataactaa 15554002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 17591850 - 17591921
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  17591850 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttta 17591921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15554195 - 15554121
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| |||||||||||| |||||||| ||||||||||||||||||||||||    
T  15554195 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccattttttcaaaacatatattttaatt 15554121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 20089633 - 20089703
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||||||||||||    
T  20089633 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttt 20089703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 33510646 - 33510720
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| |||||||||||| || ||||||||||||||||||||||||||||||    
T  33510646 acaaggagcttatgaatttatgtaacctccttcgattctctc-tgaatccactttttcaaaacatatattttaatt 33510720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 46761128 - 46761206
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa 80  Q
    ||||||||||||||||||||||| |  || ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  46761128 acaaggagcttatgaatttatgtaacttccttcgattctctctag-atccactttttcaaaacatatattttaattataa 46761206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 13996670 - 13996573
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  13996670 aaaacatatattttaattataatgttaattatctttggttgtgcatgagtaacaaaattgttatatacttatcttactaaagtaacacaggtaactaa 13996573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 14004784 - 14004687
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  14004784 aaaacatatattttaattataatgttaattatctttggttgtgcatgagtaacaaaattgttatatacttatcttactaaagtaacacaggtaactaa 14004687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29288311 - 29288389
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    |||||||||||||||||  |||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29288311 acaaggagcttatgaat--atgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 29288389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 38171986 - 38172059
Alignment:
Q  6 gagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa 80  Q
    |||||||||||||||||| | ||| ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  38171986 gagcttatgaatttatgtaacctccttcgattctctctag-atccactttttcaaaacatatattttaattataa 38172059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 40092756 - 40092853
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||| ||||||||| |||||||||||||||||||  |||||||||||||||||||||| |||||||    
T  40092756 aaaacatatattttaattataatgttagttatctttagcggtgcatgagtaacaaaattgttatatgtttatcttactaaagtaacacacgtaactaa 40092853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42370838 - 42370769
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattt 71  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||    
T  42370838 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatattt 42370769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 52697057 - 52697135
Alignment:
Q  72 taattataattatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||| ||||||| ||| ||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  52697057 taattttaattatcttttgcggtacatgagtaacaaaattgttatattcttatcttactaaagtaacacacctaactaa 52697135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 33510744 - 33510839
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||| ||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  33510744 aaacatatattttaattataatgttagttatctttggcg-tgcatgagtaacaaaattgctatatacttatcttaccaaagtaacacacataactaa 33510839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 52753076 - 52753007
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| || |||||||    
T  52753076 ttatctttggcggtgcatcagtaacaaaattgctatatacttatcttactaaagtaacaaacgtaactaa 52753007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1170487 - 1170416
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    |||||||| |||||||||||||| | ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  1170487 acaaggagtttatgaatttatgtaacctccttcgattctct-ttggatccactttttcaaaacatatatttta 1170416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16052258 - 16052325
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatat 69  Q
    ||||||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||||||||||||    
T  16052258 acaaggagcttatgaatttatgtaacctccttcgattctctctt-gatccactttttcaaaacatatat 16052325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1940790 - 1940716
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  1940790 acaaggagcttatgaatttatgtaacctccttcaattctctct-ggatctactttttcaaaacatatattttaatt 1940716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 2347819 - 2347889
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    |||| |||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||    
T  2347819 acaatgagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatatttt 2347889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8079752 - 8079678
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    |||||||| |||||||||||||| ||||| || |||||||||||  ||||||||||||||||||||||||||||||    
T  8079752 acaaggagtttatgaatttatgtaatctcctttgattctctctta-atccactttttcaaaacatatattttaatt 8079678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26580313 - 26580239
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||| ||||| |||||||| |||||||||||||||||||||||    
T  26580313 acaaggagcttatgaatttatgtaacctccttcgattatctct-ggatccacattttcaaaacatatattttaatt 26580239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 38829231 - 38829301
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | |||  |||||||||||| ||||||||||||||||||||||||||||    
T  38829231 acaaggagcttatgaatttatgtaacctccatcgattctctct-ggatccactttttcaaaacatatatttt 38829301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 970455 - 970397
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaaca 139  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  970455 ttatctttggcggtgcatcagtaacaaaattgctatatacttatcttactaaagtaaca 970397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 2347917 - 2348014
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  || ||| ||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  2347917 aaaacatatattttaattataatgttagttatctttggttgtacatgagtaacaaaatttctatatacttatcttactaaagtaacacacataactaa 2348014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 19715107 - 19715010
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  19715107 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacaggtaactaa 19715010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 26580216 - 26580119
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||| |||||||||||||||||| |||||||||| |||||||    
T  26580216 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgctatatacttatcttactagagtaacacacgtaactaa 26580119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 39260276 - 39260218
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaaca 139  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  39260276 ttatctttggcggtgcatcagtaacaaaattgctatatacttatcttactaaagtaaca 39260218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 16052386 - 16052443
Alignment:
Q  93 gtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  16052386 gtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacacgtaactaa 16052443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 29078792 - 29078861
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||||||| ||||| || |||||||    
T  29078792 ttatctttggcggtgcatcagtaacaaaattgctatatacttatcttactaaactaacaaacgtaactaa 29078861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 29288423 - 29288492
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| || |||||||    
T  29288423 ttatctttggcggtacatcagtaacaaaattgctatatacttatcttactaaagtaacaaacgtaactaa 29288492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5215547 - 5215618
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| ||||||| |||| ||||||||| ||||||||||||||||||||    
T  5215547 acaaggagcttatgaatttatgtaacctccttcgattatctc-tggatccaccttttcaaaacatatatttta 5215618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 17591947 - 17592045
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataag-taacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||| |||||||||||| ||||||||||| |||||  |||||||||||||||||||||| |||||||    
T  17591947 aaaacatatattttaattataatgttagttatctttagcggtgcataagataacaaaattgctatatgtttatcttactaaagtaacacacgtaactaa 17592045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 41928538 - 41928468
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||  |||||||||||| |||||||||||||||||||||||| ||||    
T  41928538 acaaggagcttatgaatttatgtaaccttcttcgattctctc-tggatccactttttcaaaacatatttttt 41928468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 8079608 - 8079558
Alignment:
Q  100 agtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  8079608 agtaataaaattgctatatacttatcttactaaagtaacacacataactaa 8079558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 1170363 - 1170294
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||| ||||||||||| ||||||||||| |||||  |||||||||||||||||||||| |||||||    
T  1170363 ttatctttagcggtgcataaataacaaaattgctatatgtttatcttactaaagtaacacacgtaactaa 1170294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 23323032 - 23323084
Alignment:
Q  27 ctcattcgattctctcttggatccactttttcaaaacatatattttaattataa 80  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  23323032 ctcattcgattctctctag-atccactttttcaaaacatatattttaattataa 23323084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 40092653 - 40092720
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatat 69  Q
    ||||||||||||||||||||||| | ||  ||||||| ||||| |||||||||||||||||||||||||    
T  40092653 acaaggagcttatgaatttatgtaacctttttcgattttctct-ggatccactttttcaaaacatatat 40092720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 46761242 - 46761302
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacaca 141  Q
    |||| ||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  46761242 ttatctttggtgctgcatgagtaacaaaattgctatatacttatcttactaaagtaacaca 46761302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 1170759 - 1170810
Alignment:
Q  100 agtaacaaaattgttatatacttatc-ttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  1170759 agtaacaaaattgttatatacttatctttcctaaagtaacacacataactaa 1170810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 32671741 - 32671810
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | | | |||||||||||| ||||||||| |||||||||||||||||||    
T  32671741 acaaggagcttatgaatttatgtaacccccttcgattctctc-tggatccac-ttttcaaaacatatatttt 32671810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 5215693 - 5215743
Alignment:
Q  100 agtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  5215693 agtaacaaaattgctatatacttatcttactaaagtaacacatgtaactaa 5215743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 12682982 - 12683051
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattt 71  Q
    ||||| ||||||||||||||||| | ||| |||||||||||| || |||||||||||||||| ||||||||    
T  12682982 acaagaagcttatgaatttatgtaacctccttcgattctctc-tgaatccactttttcaaaatatatattt 12683051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 38172106 - 38172164
Alignment:
Q  92 ggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||||||||  |||||||    
T  38172106 ggtgcatgagtaacaaaattgctatatacttatcttactaatgtaacacatctaactaa 38172164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 51359173 - 51359077
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||||| | ||||| ||||||||||||| |||||| |||||||||||||||||||||  |||||||    
T  51359173 aaaacatatattttaattataatgttagttatctttggtg-tgcatgagtaacaaaattgctatatatttatcttactaaagtaacacatgtaactaa 51359077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 22888054 - 22887997
Alignment:
Q  93 gtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||| ||||| |||||||||||||||||||||||||| ||||| |||| |||||||    
T  22888054 gtgcatgagtaataaaattgttatatacttatcttactagagtaatacacgtaactaa 22887997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 23323111 - 23323176
Alignment:
Q  72 taattataattatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaa 137  Q
    ||||| || |||| ||| ||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  23323111 taattttagttatcttttgcggtacatgagtaacaaaattgctatatacttatcttactaaagtaa 23323176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 14004838 - 14004806
Alignment:
Q  44 tggatccactttttcaaaacatatattttaatt 76  Q
    |||||||||||||||||||||||||||||||||    
T  14004838 tggatccactttttcaaaacatatattttaatt 14004806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 76
Target Start/End: Original strand, 1170656 - 1170685
Alignment:
Q  47 atccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||||||||||    
T  1170656 atccactttttcaaaacatatattttaatt 1170685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 8121156 - 8121213
Alignment:
Q  93 gtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||| ||||||||||||| ||||||||||||| | ||||||| ||||  |||||||    
T  8121156 gtgcatgagtaacaaaattgctatatacttatctcattaaagtagcacatctaactaa 8121213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 5e-58; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 37968788 - 37968640
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataa 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  37968788 acaaggagcttatgaatttatgtgacctccttcgattctctctag-atccactttttcaaaacatatattttaattataattatctttgacggtgcataa 37968690  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  37968689 gtaacaaaatttttatatacttatcttactaaagtaacacacgtaactaa 37968640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 53875819 - 53875971
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||  | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||      |||| |||| ||||    
T  53875819 acaaggagcttatgaatttatgcaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatgttagttatctttgacggt 53875917  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataact 148  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  53875918 gcatgagtaacaaaattgttatatacttatcttactaaagtaacacacgtaact 53875971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 1617246 - 1617400
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||      |||| |||||| ||    
T  1617246 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatgttagttatctttggcagt 1617344  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||| |||||||    
T  1617345 gcatgagtaacaaaattgctatatacttatcttactaaattaacacacgtaactaa 1617400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 40428751 - 40428615
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||      |||| |||||||||    
T  40428751 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatgttagttatctttggcggt 40428653  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaa 132  Q
    |||||||||||||||||| |||||||||||||||||||    
T  40428652 gcataagtaacaaaattgctatatacttatcttactaa 40428615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 6611391 - 6611240
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    |||| |||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||      |||| ||| |||||    
T  6611391 acaaagagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatgttagttatctttagcggt 6611293  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| ||||    
T  6611292 gcatgagtaacaaaattgttatatacttatcttactaaattaacacacgtaac 6611240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 30171742 - 30171895
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataat------tatatttggcggt 94  Q
    ||||||||||||||||||||| | | ||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||      ||| |||||||||    
T  30171742 acaaggagcttatgaatttatttaacctccttcgattctctct-ggatccactttt-caaaacatatattttaattataatgttagttatttttggcggt 30171839  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  30171840 gcatgagtaacaaaattgctatatacttatcttactaaagtaacacacgtaactaa 30171895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 44379218 - 44379064
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||  | ||| ||||||||||||| | ||||||||||||||||||||||||||||||||||      |||| |||||||||    
T  44379218 acaaggagcttatgaatttatgcaacctccttcgattctctct-gaatccactttttcaaaacatatattttaattataatgttacttatctttggcggt 44379120  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| | ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  44379119 gcatgaataacaaaattgttatatacttatcttactaaagtaacacatgtaactaa 44379064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 23704240 - 23704086
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | |||||| |||||||| ||||||||||||||||||||||||||||||||||||||      |||| |||||||||    
T  23704240 acaaggagcttatgaatttatgtaacctcatttgattctct-ttggatccactttttcaaaacatatattttaattataatgttagttatctttggcggt 23704142  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||| |||||||||| ||||||||||| |||||||  ||| |||| |||||||    
T  23704141 gcataagcaacaaaattgatatatacttattttactaatttaaaacacgtaactaa 23704086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 9595933 - 9595779
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataat------tatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||||      ||| || ||||||    
T  9595933 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccacttttccaaaatatatattttaattataatgttagctatcttcggcggt 9595835  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||| |||||||||||||||||||  ||| |||| |||||||    
T  9595834 gcataagtaacaaaattgctatatacttatcttactaatttaaaacacgtaactaa 9595779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 30423595 - 30423442
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    |||||||||||| |||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||      |||| ||||  |||    
T  30423595 acaaggagctta-gaatttatgtaacctccttcgattctct-ttggatccactttttcaaaacatatattttaattataatgttagttatctttgatggt 30423498  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||| |||||||    
T  30423497 gcatgagtaacaaaattgatatatacttatcttactaaaataacacacgtaactaa 30423442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 20877209 - 20877360
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    |||||||||||||| ||||| || | ||| || |||||||||| | ||||||||||||||||||||||||||||||||||      |||| |||  ||||    
T  20877209 acaaggagcttatggatttacgtaacctccttagattctctctag-atccactttttcaaaacatatattttaattataatgttagttatctttaccggt 20877307  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||| ||||    
T  20877308 gcatgagtaacaaaattgatatatacttatcttactaaattaacacacgtaac 20877360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23269077 - 23268997
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23269077 acaaggagcttatgaatttatgtaatctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 23268997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 48910008 - 48910162
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| ||||| ||||||||||||   ||||||||||||||| |||||||||||||||||||      |||  |||||  |     
T  48910008 acaaggagcttatgaatttatgtaatctccttcgattctctc-cagatccactttttcaatacatatattttaattataatgttagttaattttggaagc 48910106  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    | || ||||||||||||| |||||||||||||||||||| |||||||| |||||||    
T  48910107 gaatgagtaacaaaattgctatatacttatcttactaaattaacacacgtaactaa 48910162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 28360603 - 28360713
Alignment:
Q  46 gatccactttttcaaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaaca 139  Q
    ||||||||||||||||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  28360603 gatccactttttcaaaacatatattttaattataatgttaattatctttggttgtgcatgagtaacaaaattgctatatacttatcttactaaagtaaca 28360702  T
Q  140 cacataactaa 150  Q
    ||| |||||||    
T  28360703 cacgtaactaa 28360713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 2481439 - 2481359
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2481439 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 2481359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23261917 - 23261837
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23261917 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 23261837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31969843 - 31969923
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31969843 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 31969923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 54189707 - 54189787
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  54189707 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 54189787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 52139457 - 52139554
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      |||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  52139457 aaaacatatattttaattataatgttagttatatttggttgtgcatgagtaacaaaattgttatatacttatcttactaaagtaacacacgtaactaa 52139554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 53408280 - 53408377
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53408280 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 53408377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 8932121 - 8932033
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacaca 141  Q
    |||||||||||||||||||||||      ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8932121 aaaacatatattttaattataatgttagttatctttggcggtgcataagtaacaaaattgttatatacttatcttactaaaataacaca 8932033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 27488578 - 27488482
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| |||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27488578 aaacatatattttaattataatgttagttatctttgacggtgcatgagtaacaaaattgttatatacttatcttaccaaagtaacacacataactaa 27488482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 35490706 - 35490610
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  35490706 aaacatatattttaattataatgttggttatctttggcggtgcatgagtaacaaaattgctatatacttatcttaccaaagtaacacacataactaa 35490610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 53717495 - 53717415
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  53717495 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaagatatattttaattataatt 53717415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 45424565 - 45424487
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa 80  Q
    ||||||||||||||||||||||| | ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  45424565 acaaggagcttatgaatttatgtaacctccttcgattctttct-ggatccactttttcaaaacatatattttaattataa 45424487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 44784852 - 44784755
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  44784852 aaaacatatattttaattataatgttagttatctttagcggtgcatgagtaacaaaattgttatatatttatcttactaaagtaacacacgtaactaa 44784755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 50353963 - 50354115
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatata-ttttaattataa------ttatatttggcgg 93  Q
    ||||||||||||||||||||||| | ||| ||||||| |||| ||||| ||||||||||||||||||| ||||||||||||      |||| |||  | |    
T  50353963 acaaggagcttatgaatttatgtaacctccttcgattatctc-tggattcactttttcaaaacatatatttttaattataatgttagttatctttaacag 50354061  T
Q  94 tgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    || || ||||||||||||| ||||||| |||||||||||| |||| ||||||||    
T  50354062 tgtatgagtaacaaaattgctatatacctatcttactaaattaacgcacataac 50354115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 55344631 - 55344534
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||| || |||||||    
T  55344631 aaaacatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaattgttatatacttattttactaaagtaacatacgtaactaa 55344534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14987954 - 14988034
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    |||| |||||||||||||||||| | ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  14987954 acaatgagcttatgaatttatgtaacctccttcgattctttct-ggatccactttttcaaaacatatattttaattataatt 14988034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 43289989 - 43289917
Alignment:
Q  3 aaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  43289989 aaggagcttatgaatttatgtaacctccttcgattctct-ttggatccactttttcaaaacatatattttaatt 43289917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 53717383 - 53717314
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  53717383 ttatctttggtggtgcataagtaacaaaattgttatatacttatcttactaaagtaatacacgtaactaa 53717314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 23776381 - 23776309
Alignment:
Q  78 taattatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  23776381 taattatctttggtggtgcatgagtaacaaaattgttatatacttatcttactaaagtaacacatgtaactaa 23776309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27536135 - 27536064
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  27536135 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttta 27536064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 37465006 - 37465066
Alignment:
Q  90 gcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37465006 gcggtgcatgagtaacaaaattgttatatacttatcttactaaagtaacacacctaactaa 37465066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 50055429 - 50055501
Alignment:
Q  78 taattatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||| |||||| |||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  50055429 taattatctttggcagtgcatgagtaacaaaattgttatatacttatcttaccaaagtaagacacataactaa 50055501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1756795 - 1756721
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| |||||||||||| || ||||||||||||||||||||||||||||||    
T  1756795 acaaggagcttatgaatttatgtaacctctttcgattctctc-tgaatccactttttcaaaacatatattttaatt 1756721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 6688658 - 6688588
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||||||||||||    
T  6688658 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttt 6688588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8591123 - 8591049
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  8591123 acaaggagcttatgaatttatgtaacctccttcggttctctct-ggatccactttttcaaaacatatattttaatt 8591049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 27488679 - 27488605
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    |||| |||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  27488679 acaaagagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 27488605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33704003 - 33704080
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa 80  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  33704003 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttc-aaacatatattttaattataa 33704080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35490804 - 35490730
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | | | ||||||||||||| ||||||||||||||||||||||||||||||||    
T  35490804 acaaggagcttatgaatttatgtaaccaccttcgattctctct-ggatccactttttcaaaacatatattttaatt 35490730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37464883 - 37464957
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    |||| |||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  37464883 acaaagagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 37464957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38055319 - 38055393
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | |||  |||||||||||| ||||||||||||||||||||||||||||||||    
T  38055319 acaaggagcttatgaatttatgtaacctccatcgattctctct-ggatccactttttcaaaacatatattttaatt 38055393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 50055307 - 50055381
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||| |||||||||||||||||||||||||||    
T  50055307 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggattcactttttcaaaacatatattttaatt 50055381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 53408182 - 53408252
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||||||||||||    
T  53408182 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttt 53408252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 150
Target Start/End: Complemental strand, 2481334 - 2481256
Alignment:
Q  72 taattataattatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||| || |||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2481334 taattttagttatcttttgcggtacatgagtaacaaaattgttatatacttatcttactaaagtaacacacctaactaa 2481256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 6688561 - 6688464
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  6688561 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacacgtaactaa 6688464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 19164907 - 19164822
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaaca 139  Q
    ||||||||||||||||||||||      ||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  19164907 aaacatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaattgctatatacttatcttactaaagtaaca 19164822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 38071263 - 38071166
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||||   |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38071263 aaaacatatattttaattataatgttagttatctttgattgtgcatgagtaacaaaattgttatatacttatcttactaaagtaacacacgtaactaa 38071166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 54189821 - 54189890
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| || |||||||    
T  54189821 ttatctttggcggtgcatcagtaacaaaattgctatatacttatcttactaaagtaacaaacgtaactaa 54189890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15241059 - 15240988
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  15241059 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatacatttta 15240988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16700943 - 16701014
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||| ||||||||| | ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  16700943 acaaggagcttataaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatatttta 16701014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19913661 - 19913590
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  19913661 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatacatttta 19913590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44784948 - 44784877
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    |||| |||||||||||||||||| | ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  44784948 acaatgagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatatttta 44784877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 11639609 - 11639539
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||| || |||||||||| ||||||||||||||||||||||||||||    
T  11639609 acaaggagcttatgaatttatgtaacctcttttgattctctct-ggatccactttttcaaaacatatatttt 11639539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28032743 - 28032673
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  28032743 acaaggagcttatgaatttatgtaacctccttcgattatctct-ggatccactttttcaaaacatatatttt 28032673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 47632197 - 47632267
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  47632197 acaaggagcttatgaatttatgtaacctccttcaattctctct-ggatccactttttcaaaacatatatttt 47632267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 8591025 - 8590928
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  ||| || ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  8591025 aaaacatatattttaattataatgttagttatctttggttgtggatgagtaacaaaattgctatatacttatcttactaaagtaacacacgtaactaa 8590928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 14988067 - 14988133
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    |||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  14988067 ttatctttggcggtgcatgagtaacaaaattactatatacttatcttactaaagtaacacacgtaac 14988133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 15240959 - 15240862
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||  |||||||||||||||||||||| |||||  |||||||||||||||||||||| |||||||    
T  15240959 aaaacatatattttaattataatgttagttatctttaacggtgcataagtaacaaaattgatatatgtttatcttactaaagtaacacacgtaactaa 15240862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 15669442 - 15669539
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||  |||||||||||||||||||||| |||||  |||||||||||||||||||||| |||||||    
T  15669442 aaaacatatattttaattataatgttagttatctttaacggtgcataagtaacaaaattgatatatgtttatcttactaaagtaacacacgtaactaa 15669539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 16701040 - 16701137
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||| ||||||||      ||| ||| ||||||||||||||||||||||| |||||  |||||||||||||||||||||| |||||||    
T  16701040 aaaacatatatttttattataatgttagttatctttagcggtgcataagtaacaaaattgctatatgtttatcttactaaagtaacacacgtaactaa 16701137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27583663 - 27583594
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattt 71  Q
    ||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||||||||| ||||||||    
T  27583663 acaaggagcttatgaatttatgtaatctccttcaattctctc-tggatccactttttcaaaatatatattt 27583594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 38055419 - 38055516
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||||   |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  38055419 aaaacatatattttaattataatgttagttatctttgattgtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacacgtaactaa 38055516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40680069 - 40680000
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattt 71  Q
    ||||| ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| ||||||||    
T  40680069 acaagaagcttatgaatttatgtaacctcattcgattctctc-tggatccactttttcaaaatatatattt 40680000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 60 - 147
Target Start/End: Complemental strand, 43289892 - 43289800
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    ||||||||||||||||||||||      ||| ||||||||| ||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  43289892 aaacatatattttaattataatgttggttatctttggcggt-catgagtaacaaaattgctatatacttatcttaccaaagtaacacacataac 43289800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 47632295 - 47632392
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||||    
T  47632295 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgctatatacttatcttactaaagtatcacacgtaactaa 47632392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 23261803 - 23261734
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| |||||||||| || ||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  23261803 ttatctttggcggtgtattagtaacaaaattgctatatacttatcttacaaaagtaacacacgtaactaa 23261734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 23268963 - 23268894
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| |||||||||| || ||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  23268963 ttatctttggcggtgtattagtaacaaaattgctatatacttatcttacaaaagtaacacacgtaactaa 23268894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 33704115 - 33704184
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  33704115 ttattttttgcggtgcatgagtaacaaaattgctatatacttatcttattaaagtaacacacctaactaa 33704184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 45424451 - 45424382
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||| ||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  45424451 ttatcttttgcggtacatgagtaacaaaattgttgtatacttatcttactaaagtaacacacctaactaa 45424382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 54412790 - 54412866
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattat 78  Q
    ||||||||| ||||||||||||| | ||| |||||||||||| |||| |||||||||||||||||| |||||||||||    
T  54412790 acaaggagcatatgaatttatgtaacctccttcgattctctc-tggaaccactttttcaaaacatacattttaattat 54412866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 55344856 - 55344784
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaa 74  Q
    ||||||||||||||||||||||| | ||| || |||||||||| |||||||||||||||| |||||||||||||    
T  55344856 acaaggagcttatgaatttatgtaacctcctttgattctctct-ggatccactttttcaagacatatattttaa 55344784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19165004 - 19164933
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||| || ||||| |||||||||||||||||||||||||||||    
T  19165004 acaaggagcttatgaatttatgtaacctccttcgtttttctct-ggatccactttttcaaaacatatatttta 19164933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 53353225 - 53353299
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    |||||||||||||| |||||||| | ||| |||||||||||||   ||||||||||||||||||||||||||||||    
T  53353225 acaaggagcttatggatttatgtaacctccttcgattctctctaa-atccactttttcaaaacatatattttaatt 53353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 27536040 - 27535944
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||||||||      ||| ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  27536040 aaaaaatatattttaattataatgttagttatctttggcg-tgcatgagtaacaaaattgctatatacttatcttactaaagtaacacatgtaactaa 27535944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 38071354 - 38071286
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||   |||||||||||| |||||||||||||||||||||||||||||    
T  38071354 acaaggagcttatgaatttatgtaacct---tcgattctctct-ggatccactttttcaaaacatatatttta 38071286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 28032603 - 28032546
Alignment:
Q  93 gtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| || |||||||    
T  28032603 gtgcatgagtaacaaaattgctatatacttatcttactaaagtaacaaacgtaactaa 28032546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 44376830 - 44376899
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| |||| |||||||| ||||||||||||  || |||||||||||||||||||||||||| |||||||    
T  44376830 ttatctttgacggtgcatgagtaacaaaattactacatacttatcttactaaagtaacacacgtaactaa 44376899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15669345 - 15669416
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    |||| |||||||||||||||||| | ||| ||| ||||||||| |||||||||||||||||||||| ||||||    
T  15669345 acaaagagcttatgaatttatgtaacctccttccattctctct-ggatccactttttcaaaacatacatttta 15669416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 19913563 - 19913467
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||| ||||||||||      ||| ||| ||||||||||||||||||| ||| |||||  |||||||||||||||||||||| |||||||    
T  19913563 aaaacatatattgtaattataatgttagttatctttagcggtgcataagtaacaaa-ttgatatatgtttatcttactaaagtaacacacgtaactaa 19913467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 1756697 - 1756602
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||| ||||| ||||| ||||||| |||||||||||||||| |||||||||||  |||||||    
T  1756697 aaacatatattttaattataatgttagttatctttggcg-tgcatgagtaataaaattgatatatacttatcttaccaaagtaacacatgtaactaa 1756602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 31969957 - 31970026
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| |||||||||| || |||||||||||||  ||||||||||||||||||| ||||| || |||||||    
T  31969957 ttatctttggcggtgtatcagtaacaaaattgcaatatacttatcttactaaaataacaaacgtaactaa 31970026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8932209 - 8932142
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatat 69  Q
    ||||||| ||||||||||||||| | ||| |||||||||||| || |||||||||||||||| ||||||    
T  8932209 acaaggaacttatgaatttatgtaacctccttcgattctctc-tgcatccactttttcaaaatatatat 8932142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 30171931 - 30171971
Alignment:
Q  110 ttgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  30171931 ttgttatatacttatcttactaaagtaacacacgtaactaa 30171971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 54412904 - 54412962
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaaca 139  Q
    |||| ||| ||||||||| |||||| |||||  ||||||||||||||||||||||||||    
T  54412904 ttatctttagcggtgcatcagtaacgaaattactatatacttatcttactaaagtaaca 54412962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 55344715 - 55344654
Alignment:
Q  10 ttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    |||||||||||||| | ||| |||||||||||| |||||||| |||||||| |||||||||||    
T  55344715 ttatgaatttatgtaacctccttcgattctctc-tggatccagtttttcaagacatatatttt 55344654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23776490 - 23776423
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatat 69  Q
    ||||||| ||||||||||||||| | ||  ||||||||||||  ||||||||| |||||||||||||||    
T  23776490 acaaggatcttatgaatttatgtaaccttcttcgattctctc-aggatccactctttcaaaacatatat 23776423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 136
Target Start/End: Original strand, 34615934 - 34616049
Alignment:
Q  15 aatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataagtaacaaaattgtt 114  Q
    ||||||||| | ||| ||||||| ||||||| ||||||||||||||||||||| ||||  || |   | || ||  |  |||||||||||||||||||||    
T  34615934 aatttatgtaacctccttcgattttctcttg-atccactttttcaaaacatatttttttttttt---tttagttatctttgcataagtaacaaaattgtt 34616029  T
Q  115 atatacttatcttactaaagta 136  Q
    ||||  ||||||||||||||||    
T  34616030 atat--ttatcttactaaagta 34616049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 44376043 - 44376079
Alignment:
Q  44 tggatccactttttcaaaacatatattttaattataa 80  Q
    |||||| ||||||||||||||||||||||||||||||    
T  44376043 tggatctactttttcaaaacatatattttaattataa 44376079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 52139365 - 52139428
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatat 67  Q
    ||||| ||||||||||||||||| | ||| ||||||||||   ||||| ||||||||||||||||||    
T  52139365 acaagaagcttatgaatttatgtaacctccttcgattctc---tggatacactttttcaaaacatat 52139428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 48748222 - 48748262
Alignment:
Q  3 aaggagcttatgaatttatgtgatctcattcgattctctct 43  Q
    ||||||||||||||||||||| ||||| ||| |||||||||    
T  48748222 aaggagcttatgaatttatgtaatctccttcaattctctct 48748262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 5e-58; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 54534357 - 54534209
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataa 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||| ||||    
T  54534357 acaaggagcttatgaatttatgtgacctccttcgattctctct-ggagccactttttccaaacatatattttaattataattatctttggcggtgtataa 54534259  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54534258 gtaacaaaattgttatatacttatcttactaaagtaacacacgtaactaa 54534209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 53028376 - 53028530
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| | ||||||||||||||||||||||||||||||||||      |||| |||||| ||    
T  53028376 acaaggagcttatgaatttatgtaacctccttcgattctctct-gaatccactttttcaaaacatatattttaattataatgttagttatctttggcagt 53028474  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| |||||||||||| |||||||||||| |||||||| ||||||||||||||||    
T  53028475 gcatgagtaacaaaattcttatatacttatattactaaattaacacacataactaa 53028530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 25494314 - 25494163
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||  | ||| ||||||||||||| | ||||| ||||||||||||||||||||||||||||      |||| ||| |||||    
T  25494314 acaaggagcttatgaatttatgcaacctccttcgattctctct-gaatccagtttttcaaaacatatattttaattataatgttagttatctttagcggt 25494216  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| ||||    
T  25494215 gcatgagtaacaaaattgttatatacttatcttactaaattaacacacgtaac 25494163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 42105000 - 42104849
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataat------tatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| |||||||| |||| | || || |||||||||||||||||||||||||||||      ||| ||| |||||    
T  42105000 acaaggagcttatgaatttatgtaacctccttcgattccctct-gaattcagtttttcaaaacatatattttaattataatgttagttatctttagcggt 42104902  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| ||||    
T  42104901 gcatgagtaacaaaattgttatatacttatcttactaaattaacacacgtaac 42104849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 13696952 - 13697106
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatta------taattatatttggcggt 94  Q
    ||||||||||||||||||| ||| | ||| || |||||||||| |||||||||||||||||||||||||||||||||      || |||| ||||||| |    
T  13696952 acaaggagcttatgaatttgtgtaacctcctttgattctctct-ggatccactttttcaaaacatatattttaattagaatgttagttatctttggcgat 13697050  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||| ||| |||||||||||||||||||| |||||| | |||||||    
T  13697051 gcatgagtaacaaagttgctatatacttatcttactaaattaacacgcgtaactaa 13697106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 34700506 - 34700651
Alignment:
Q  7 agcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataat------tatatttggcggtgcataa 100  Q
    ||||||||||||||| | | ||| || |||| ||||| ||||||| |||||||||||||||||||||||||||||      ||| ||| ||||||||| |    
T  34700506 agcttatgaatttatataacctcctttgattatctct-ggatccattttttcaaaacatatattttaattataatgttagttatcttttgcggtgcatga 34700604  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||    
T  34700605 gtaacaaaattgttatatacttatcttactaaattaacacacgtaac 34700651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 35226606 - 35226759
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatta------taattatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| |||||||||||| |||| ||| |||||||||||||||||||||||||      || |||| |||||| ||    
T  35226606 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggaacca-tttttcaaaacatatattttaattagaacgttagttatctttggcagt 35226703  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||| ||| ||||||| |||||||||||| |||||||| |||||||    
T  35226704 gcatgagtaacaaagttgctatatacctatcttactaaattaacacacgtaactaa 35226759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 12117687 - 12117610
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattata 79  Q
    ||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12117687 acaaggagcttatgaatttatgtaacctcattcgattctctct-ggatccactttttcaaaacatatattttaattata 12117610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 35643430 - 35643526
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35643430 aaacatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaattgatatatacttatcttactaaagtaacacacataactaa 35643526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 21581201 - 21581281
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| |  || ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21581201 acaaggagcttatgaatttatgtaacatccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 21581281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22175019 - 22174939
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  22175019 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatcaactttttcaaaacatatattttaattataatt 22174939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 42307934 - 42307854
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  42307934 acaaggagcttatgaatttatgtaacctctttcgattctctctag-atccactttttcaaaacatatattttaattataatt 42307854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37698172 - 37698093
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataat 81  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  37698172 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggaaccactttttcaaaacatatattttaattataat 37698093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15520171 - 15520097
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  15520171 acaaggagcttatgaatttatgtaacctcattcgattctctc-tggatccactttttcaaaacatatatttaaatt 15520097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 20842377 - 20842299
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa 80  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  20842377 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatcaactttttcaaaacatatattttaattataa 20842299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44609362 - 44609284
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa 80  Q
    |||||||| |||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44609362 acaaggagtttatgaatttatgtaacctctttcgattctctct-ggatccactttttcaaaacatatattttaattataa 44609284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 48925032 - 48924958
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  48925032 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 48924958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 50529088 - 50529166
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa 80  Q
    |||||||| |||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50529088 acaaggagtttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataa 50529166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15520795 - 15520875
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||| ||| | ||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  15520795 acaaggagcttatgaatttttgtaacctccttcgattctctctcg-atccactttttcaaaacatatattttaattataatt 15520875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 25999547 - 25999627
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||  ||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  25999547 acaaggagcttatgaatttatgtaaccttcttcgattctctct-ggatccactttttcaaaacatatgttttaattataatt 25999627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 42307820 - 42307751
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||    
T  42307820 ttatctttggcggtgcatcagtaacaaaattgttatatacttatcttactaaagtaacaaacgtaactaa 42307751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 48924934 - 48924838
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  48924934 aaacatatattttaattataatattagttatctttggcggtgcatgagtaacaaaattgctatatacttatgttaccaaagtaacacacataactaa 48924838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38934104 - 38934175
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  38934104 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttta 38934175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 8042766 - 8042836
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||||||||||||    
T  8042766 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttt 8042836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 21581314 - 21581385
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaaaa 152  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || |||||||||    
T  21581314 ttatttttggcggtgcatcagtaacaaaattgttatatgcttatcttactaaagtaacaaacgtaactaaaa 21581385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 46452191 - 46452117
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| | ||||||||||||||||||||||||||||||    
T  46452191 acaaggagcttatgaatttatgtaacctccttcgattctctctag-atccactttttcaaaacatatattttaatt 46452117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 50528911 - 50528841
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||||    
T  50528911 acaaggagcttatgaatttatgtaacctcattcgattctatc-tggatccactttttcaaaacatatatttt 50528841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 54870203 - 54870129
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  54870203 acaaggagcttatgaatttatgtaacctccttcgattctttct-ggatccactttttcaaaacatatattttaatt 54870129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 8042864 - 8042961
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  8042864 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacacgtaactaa 8042961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 24366188 - 24366265
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattata 79  Q
    ||||||||||||||||||||||| | ||| || |||||||||||| ||||||||||||||||||||||||||| |||||    
T  24366188 acaaggagcttatgaatttatgtaacctccttagattctctcttg-atccactttttcaaaacatatattttacttata 24366265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 38934203 - 38934300
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||| ||||||||||||||||||||||| |||||  |||||||||||||||||||||| |||||||    
T  38934203 aaaacatatattttaattataatgttagttatctttagcggtgcataagtaacaaaattgctatatgtttatcttactaaagtaacacacgtaactaa 38934300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 50528814 - 50528717
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| || |||||||||||||||||||||||||||||||||||||||| |||||||    
T  50528814 aaaacatatattttaattataatgttagttatctttggttgtgcatgagcaacaaaattgttatatacttatcttactaaagtaacacacgtaactaa 50528717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 2895462 - 2895531
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  2895462 ttatcttttgcggtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacacctaactaa 2895531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 15520039 - 15519982
Alignment:
Q  93 gtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15520039 gtgcatgagtaacaaaattgttatatacttatcttactaaagtaacacacgtaactaa 15519982  T

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Target: chr3; HSP #35
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 20699308 - 20699388
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    |||||||||||| |||||| ||| | ||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  20699308 acaaggagcttaggaatttttgtaacctccttcgattctctctcg-atccactttttcaaaacatatattttaattataatt 20699388  T

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Target: chr3; HSP #36
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29445647 - 29445727
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||| ||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  29445647 acaaggagcttatgaatttatgtaacctccttccattctatct-ggatccactttttcaaaagatatattttaattataatt 29445727  T

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Target: chr3; HSP #37
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 29445761 - 29445830
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  29445761 ttatctttggtggtgcatgagtaacaaaattgttatatacttatcttactaaagtaatacacgtaactaa 29445830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 46452092 - 46451996
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| |||| | |||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  46452092 aaacatatattttaattataatgttagttatctttgaccgtgcatgagtaacaaaattgttatatacttatcttaccaaaataacacacataactaa 46451996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 54870068 - 54870011
Alignment:
Q  93 gtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54870068 gtgcatgagtaacaaaattgttatatacttatcttactaaagtaacacacgtaactaa 54870011  T

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Target: chr3; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38856252 - 38856326
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||| ||||| | ||||||||||||||||||||||||||||||    
T  38856252 acaaggagcttatgaatttatgtaacctctttcgattatctct-gaatccactttttcaaaacatatattttaatt 38856326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 15520900 - 15520978
Alignment:
Q  72 taattataattatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||| || |||| ||| ||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  15520900 taattttagttatcttttgcggtacatgagtaacaaaattgctatatacttatcttactaaagtaacacacctaactaa 15520978  T

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Target: chr3; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 20699413 - 20699491
Alignment:
Q  72 taattataattatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||| || |||| ||| ||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  20699413 taattttagttatcttttgcggtacatgagtaacaaaattgctatatacttatcttactaaagtaacacacctaactaa 20699491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 150
Target Start/End: Complemental strand, 22174914 - 22174836
Alignment:
Q  72 taattataattatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||| || |||| ||| ||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  22174914 taattttagttatcttttgcggtacatgagtaacaaaattgctatatacttatcttactaaagtaacacacctaactaa 22174836  T

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Target: chr3; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 24835728 - 24835655
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaat 75  Q
    ||||||||||||||||||||||| | ||| ||||||| ||||| | |||||||||||||||||||||||||||||    
T  24835728 acaaggagcttatgaatttatgtaaactccttcgattatctctag-atccactttttcaaaacatatattttaat 24835655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 32244372 - 32244469
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  32244372 aaaacatatattttaattataatgttagttatctttggttgtgcatgactaacaaaattgctatatacttatcttactaaagtaacacacgtaactaa 32244469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 142
Target Start/End: Original strand, 44689017 - 44689106
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacac 142  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  44689017 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacac 44689106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 2895358 - 2895426
Alignment:
Q  11 tatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa 80  Q
    ||||||||||| | | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2895358 tatgaatttatataacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataa 2895426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 12117575 - 12117506
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||||| | ||||||||||| |||||||    
T  12117575 ttatctttggcggtgcatgagtaacaaaattgctatatacttatcttattgaagtaacacacgtaactaa 12117506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 20842263 - 20842194
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||| ||||||||| | ||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  20842263 ttatcttttgcggtgcatgactaacaaaatggttatatacttatcttactaaagtaacacacctaactaa 20842194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 25999661 - 25999730
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| |||||||||| || ||||||||||||| |||||||||||||||||||||||||| || |||||||    
T  25999661 ttatctttggcggtgtatcagtaacaaaattgctatatacttatcttactaaagtaacaaacgtaactaa 25999730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16354505 - 16354576
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| | ||||| ||||| |||||||||||||||||||||||||||||    
T  16354505 acaaggagcttatgaatttatgtaacctcctgcgattatctct-ggatccactttttcaaaacatatatttta 16354576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 16354643 - 16354701
Alignment:
Q  92 ggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||| || ||| |||||||||||||||||||||| |||||||    
T  16354643 ggtgcataagtaacaaaattgctagatatttatcttactaaagtaacacacgtaactaa 16354701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 32359508 - 32359605
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||||||||      ||| |||||  |||||| ||||||||||||| |||||| |||||||||||||||||||||| |||||||    
T  32359508 aaaaaatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgctatataattatcttactaaagtaacacacgtaactaa 32359605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 50529193 - 50529271
Alignment:
Q  72 taattataattatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||| || |||| ||| ||||| ||| ||||||||||||| |||||||||||||||||||||||| |||| |||||||    
T  50529193 taattttagttatcttttgcggtacatgagtaacaaaattgctatatacttatcttactaaagtaagacacctaactaa 50529271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 38856350 - 38856445
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||| ||||| ||||| ||||||| |||||||||||||||| |||||||||||| |||||||    
T  38856350 aaacatatattttaattataatgttagttatctttggcg-tgcatgagtaataaaattgatatatacttatcttaccaaagtaacacacgtaactaa 38856445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 32359418 - 32359488
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    |||| |||||||||||||||||| | ||| |||||||||||| ||||||||||||||| || ||||||||||    
T  32359418 acaaagagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttccaagcatatatttt 32359488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 44688919 - 44688989
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    |||| |||||||||||||||||  | ||| ||||||||||||| | ||||||||||||||||||||||||||    
T  44688919 acaatgagcttatgaatttatgcaacctccttcgattctctctag-atccactttttcaaaacatatatttt 44688989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 37698058 - 37698000
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaaca 139  Q
    |||| ||||||||||||| |||||| |||||  ||||||||||||||||||||||||||    
T  37698058 ttatctttggcggtgcatcagtaacgaaattactatatacttatcttactaaagtaaca 37698000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 121
Target Start/End: Original strand, 24366298 - 24366341
Alignment:
Q  78 taattatatttggcggtgcataagtaacaaaattgttatatact 121  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||    
T  24366298 taattatctttggcggtgcatgagtaacaaaattgttatatact 24366341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 44609234 - 44609197
Alignment:
Q  100 agtaacaaaattgttatatacttatcttactaaagtaa 137  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  44609234 agtaacaaaattgctatatacttatcttactaaagtaa 44609197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26122973 - 26123049
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattat 78  Q
    ||||| |||||||||||||| || |  |  ||||||||||||| || || ||||||||||||||||||||| ||||||    
T  26122973 acaagtagcttatgaatttacgtaacattcttcgattctctctagg-tctactttttcaaaacatatatttaaattat 26123049  T

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Target: chr8 (Bit Score: 110; Significance: 1e-55; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 5320728 - 5320876
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataa 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  5320728 acaaggagcttatgaatttatgtgacctccttcgattctctct-ggatccactttttcaaaatatatattttaattataattatctttggcggtgcataa 5320826  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
     |||||||||| ||||||||||||||| |||||||||||||| |||||||    
T  5320827 ataacaaaattattatatacttatcttgctaaagtaacacacgtaactaa 5320876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 34842408 - 34842268
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataa 100  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  34842408 acaaggagcttattaatttatgtgacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataattatctttggcggtgcaaaa 34842310  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacac 142  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  34842309 gtaacaaaattgctatatacttatcttactaaagtaacacac 34842268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 39218941 - 39219089
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataa 100  Q
    |||||||||| |||||||||||||| ||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  39218941 acaaggagctgatgaatttatgtgacctccttcgattctctctag-atccactttttcaaaacatatattttaattataattatctttgacggtgcataa 39219039  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  39219040 gtaacaaaattgctatatacttatcttactaaagtaacacacgtaactaa 39219089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 882976 - 883081
Alignment:
Q  45 ggatccactttttcaaaacatatattttaattataattatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacat 144  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  882976 ggatccactttttcaaaacatgtattttaactataattatctttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacgt 883075  T
Q  145 aactaa 150  Q
    ||||||    
T  883076 aactaa 883081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 41575677 - 41575831
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||||||||||||||||| | ||||||||||||||||||||||||||||||||||      |||| |||| ||||    
T  41575677 acaaggagcttatgaatttatgtaacctcattcgattctctctag-atccactttttcaaaacatatattttaattataatgttagttatctttgacggt 41575775  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  41575776 gcatgagtaacaaaattactatatacttatcttactaaagtaacacacgtaactaa 41575831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 42571755 - 42571909
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||| ||||||||||||||  | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||      |||| |||||||||    
T  42571755 acaaggaacttatgaatttatgcaacctctttcgattctctct-ggatccactttttcaaaacatatattttaattataatgttagttatctttggcggt 42571853  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||  ||||||||||| |||||||||||||||||||||||||||||  |||||||    
T  42571854 gcatgggtaacaaaattattatatacttatcttactaaagtaacacatgtaactaa 42571909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 144558 - 144704
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||      |||| |||| | ||    
T  144558 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttagttataatgttagttatctttgccagt 144656  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacac 142  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  144657 gcatgagtaacaaaattgctatatacttatcttactaaattaacacac 144704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 39206750 - 39206899
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataat------tatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||      ||| ||| |||||    
T  39206750 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccaccttttcaaaacatatattttaattataatgttcgctatctttagcggt 39206848  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    ||||  |||||||||||  |||||||||||||||||||| |||||||| ||||    
T  39206849 gcat--gtaacaaaattactatatacttatcttactaaattaacacacgtaac 39206899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 33287074 - 33286935
Alignment:
Q  7 agcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggtgcataa 100  Q
    ||||||||||||||||| | ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||      |||| |||||| ||||||      
T  33287074 agcttatgaatttatgtaacctccttcgattctct-ttgaatccactttttcaaaacatatattttaattataatgttagttatctttggcagtgcatgg 33286976  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacaca 141  Q
    |||||||||||  |||||||||||||||||||| |||||||    
T  33286975 gtaacaaaatttctatatacttatcttactaaattaacaca 33286935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 28639451 - 28639597
Alignment:
Q  6 gagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa--tta--tat-ttggcggtgcataa 100  Q
    ||||||||||  |||||| | ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||  ||| ||||| |||||| |    
T  28639451 gagcttatga--ttatgtaacctccttcgattctct-ttggatccactttttcaaaacatatattttaattataatgttagttatcttggcagtgcatga 28639547  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
     |||||||||||||||||| ||||||||||||| |||||||| |||||||    
T  28639548 ataacaaaattgttatatatttatcttactaaattaacacacgtaactaa 28639597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 38167198 - 38167045
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||| ||||||||||||||||| | ||| |||||||||| || ||| ||| ||||||||||||||||||||||||| ||      |||| |||||| ||    
T  38167198 acaagaagcttatgaatttatgtaacctccttcgattctcgct-ggaacca-tttttcaaaacatatattttaattagaacgttagttatctttggcagt 38167101  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||| ||| |||||||||||||||||||| |||||||| |||||||    
T  38167100 gcatgagtaacaaagttgctatatacttatcttactaaattaacacacgtaactaa 38167045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7812159 - 7812230
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||    
T  7812159 acaaggagcttatgaatttatgtaacctcattcgattctctc-tggatccactttttcaaaacatatatttta 7812230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18594701 - 18594780
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataat 81  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  18594701 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggaaccactttttcaaaacatatattttaattataat 18594780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 6144316 - 6144242
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  6144316 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 6144242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 14422867 - 14422941
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  14422867 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 14422941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 33278564 - 33278638
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  33278564 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 33278638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 36491321 - 36491399
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa 80  Q
    ||||| ||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36491321 acaagaagcttatgaatttatgtaacctctttcgattctctct-ggatccactttttcaaaacatatattttaattataa 36491399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 9807520 - 9807615
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9807520 aaacatatattttaattataatgttagttatctttggcg-tgcatgagtaacaaaattgttatatacttatcttaccaaagtaacacacataactaa 9807615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 13110666 - 13110761
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13110666 aaacatatattttaattataatgttagttatctttggcg-tgcatgagtaacaaaattgttatatacttatcttaccaaagtaacacacataactaa 13110761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7791575 - 7791646
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  7791575 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttta 7791646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24113209 - 24113138
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  24113209 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttta 24113138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 29938601 - 29938688
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacac 140  Q
    |||||||||||||||||||||||      ||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  29938601 aaaacatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaattgatatatacttatcttactaaagtaacac 29938688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34998939 - 34998868
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||| | ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  34998939 acaaggagcttatgaatttatttaatctccttcgattctctc-tggatccactttttcaaaacatatatttta 34998868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 13110568 - 13110642
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||| ||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  13110568 acaaggagcttatgagtttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 13110642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 33278662 - 33278760
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaaaa 152  Q
    ||||||||||||||||||||||      ||| |||| |||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  33278662 aaacatatattttaattataatgttagttatctttgacggtacatgagtaacaaaattgttatatatttatcttaccaaagtaacacacataactaaaa 33278760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7774928 - 7774998
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||||  ||||||||||||||||||||||||||||    
T  7774928 acaaggagcttatgaatttatgtaacctccttcgattctctct--gatccactttttcaaaacatatatttta 7774998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 8021973 - 8022068
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||| ||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  8021973 aaacatatattttaattataatgttagttatctttggcg-tgcatgagtaacaaaattgctatatacttatcttaccaaagtaacacacataactaa 8022068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 34679404 - 34679308
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||||||||| ||||||||||||| |||||| ||||||||| |||||||| |||||||||||    
T  34679404 aaacatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaattgctatatagttatcttaccaaagtaacccacataactaa 34679308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2042567 - 2042496
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| ||||||||||||  |||||||||||||||||||||||||||||    
T  2042567 acaaggagcttatgaatttatgtaacctccttcgattctctc-cggatccactttttcaaaacatatatttta 2042496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 44804890 - 44804791
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaaaa 152  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||| ||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  44804890 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtgacaaaattgttatatacttatcttattaaagtaacacacgtaactaaaa 44804791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 4036011 - 4036085
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| |||||||||||| | |||||| ||||||||||||||||||||||||    
T  4036011 acaaggagcttatgaatttatgtaacctccttcgattctctc-tagatccaatttttcaaaacatatattttaatt 4036085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22260673 - 22260603
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||| |||||||||||| |||||||| ||||||||||||||||||||    
T  22260673 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccaatttttcaaaacatatatttt 22260603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29938225 - 29938291
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatata 68  Q
    ||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||||||||    
T  29938225 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatata 29938291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 35118074 - 35118004
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||| ||||||||||||||||| | |||||||||||||||| ||||| |||||||||||||||||||||||    
T  35118074 acaagaagcttatgaatttatgtaacctcattcgattctctc-tggattcactttttcaaaacatatatttt 35118004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 24113112 - 24113015
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||| ||||||||      ||| ||| ||||||||||||||||||||||| |||||  |||||||||||||||||||||| |||||||    
T  24113112 aaaacatatatttttattataatgttagttatctttagcggtgcataagtaacaaaattgctatatgtttatcttactaaagtaacacacgtaactaa 24113015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 142
Target Start/End: Complemental strand, 35117977 - 35117888
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacac 142  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  35117977 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgatatatacttatcttactaaagtaacacac 35117888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 4036111 - 4036207
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||||||||| | ||| ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  4036111 aaacatatattttaattataatgttagttatctttggcggtgcatgaataataaaattgctatatatttatcttaccaaagtaacacacataactaa 4036207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10836798 - 10836731
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatat 69  Q
    ||||||||||||||||||||||| | ||| ||||||| |||| ||||||||||||||||||||||||||    
T  10836798 acaaggagcttatgaatttatgtaacctctttcgattatctc-tggatccactttttcaaaacatatat 10836731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 34998843 - 34998746
Alignment:
Q  60 aaacatatattttaattataa-------ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||       |||| |||| | || ||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  34998843 aaacatatattttaattataaatgttagttatctttgacagtacatgagtaacaaaattgctatatacttatcttactaaagtgacacacataactaa 34998746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 44804987 - 44804917
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||| |||||||||||| | ||| |||||||||||||||||||||||    
T  44804987 acaaggagcttatgaatttatgtaacctccttcgattctctc-tagattcactttttcaaaacatatatttt 44804917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 142
Target Start/End: Complemental strand, 2042471 - 2042382
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacac 142  Q
    |||| ||||||||||||||||||      ||| ||| ||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  2042471 aaaaaatatattttaattataatgttatttatctttagcggtgcataagtaacaaaattgatatatgtttatcttactaaagtaacacac 2042382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 10836698 - 10836601
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| |||||||||||||||||||| |||||||| ||||||||| ||| |||||||    
T  10836698 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgttatatatttatcttattaaagtaacccacgtaactaa 10836601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 22260575 - 22260478
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||| ||      ||| |||||  |||||| ||||||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  22260575 aaaacatatattttaattatcatgttagttatctttggttgtgcatgagtaacaaaattgctatatacttatcttactgaagtaacacacgtaactaa 22260478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34679500 - 34679431
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattt 71  Q
    |||| |||||||||||||||||| | ||| ||||||||| ||| |||||||||||||||||||||||||||    
T  34679500 acaatgagcttatgaatttatgtaacctccttcgattctttct-ggatccactttttcaaaacatatattt 34679431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 6144180 - 6144123
Alignment:
Q  93 gtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||| || |||||||||| |||||||||||||||| ||||||||||||||||||||    
T  6144180 gtgcatgagcaacaaaattgctatatacttatcttaccaaagtaacacacataactaa 6144123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 9807424 - 9807496
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||  | ||| |||| ||||||   ||||||||||||||||||||||||||||||||    
T  9807424 acaaggagcttatgaatttatgaaacctccttcgtttctct---ggatccactttttcaaaacatatattttaatt 9807496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 36491435 - 36491504
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||  |||||||    
T  36491435 ttatcttttgcggtacatgagtaacaaaattgttatatacttatcttactaaagtagcacatctaactaa 36491504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 7812759 - 7812839
Alignment:
Q  72 taattataattatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaaaa 152  Q
    ||||| || |||| |||| |||||||| ||||| |||||||||||| |||||||||||||||| ||||||| |||| ||||    
T  7812759 taattttagttatctttgacggtgcatgagtaataaaattgttatacacttatcttactaaagcaacacacgtaacaaaaa 7812839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8021875 - 8021949
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||| ||||| | | ||  ||||||||||||| | ||||||||||||||||||||||||||||||    
T  8021875 acaaggagcttatgagtttatataacctacttcgattctctct-gaatccactttttcaaaacatatattttaatt 8021949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 18594815 - 18594873
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaaca 139  Q
    |||| ||||||||||||| |||||| |||||  ||||||||||||||||||||||||||    
T  18594815 ttatctttggcggtgcatcagtaacgaaattactatatacttatcttactaaagtaaca 18594873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 7792166 - 7792232
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    |||| |||| |||||||| ||||| |||||||||||| |||||||||||||||| || |||| ||||    
T  7792166 ttatctttgacggtgcatgagtaataaaattgttatacacttatcttactaaagcaaaacacgtaac 7792232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 14422973 - 14423009
Alignment:
Q  114 tatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||||||||| |||||||    
T  14422973 tatatacttatcttactaaagtaacacacgtaactaa 14423009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 66222 - 66180
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctct 43  Q
    |||||||||||||||||||| |||| ||| |||||||||||||    
T  66222 acaaggagcttatgaatttacgtgacctccttcgattctctct 66180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 5e-52; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 31410641 - 31410791
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataa 100  Q
    |||||||| |||||||||||||||| ||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  31410641 acaaggagtttatgaatttatgtgacctccttcgattctcttttg-atccactttttcaaaacatatattttaattataattatcttttgcggtgcataa 31410739  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacacataactaaaa 152  Q
    |||| ||||||||||||||||||||||||||||||| ||||| ||| |||||    
T  31410740 gtaagaaaattgttatatacttatcttactaaagtaccacacgtaaataaaa 31410791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 1165644 - 1165493
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||      |||| ||| |||||    
T  1165644 acaaggagcttatgaatttatgtaacctccttcgattctct-ttggatccagtttttcaaaacatatattttaattataatgttagttatctttagcggt 1165546  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| ||||    
T  1165545 gcatgagtaacaaaattgttatatacttatcttactaaattaacacacgtaac 1165493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 27679212 - 27679132
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27679212 acaaggagcttatgaatttatgtaatctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 27679132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 27025121 - 27025275
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    |||||||| |||| ||||||||| | ||| ||||||||||||| |||||||||||||||||||||||||||| |||||||      |||| |||| || |    
T  27025121 acaaggagtttataaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttgattataatgttagttatctttgacgat 27025219  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||| ||||| |||||||||||||  ||| |||| |||||||    
T  27025220 gcataagtaacaaaattgctatattcttatcttactaatttaaaacacgtaactaa 27025275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26602985 - 26602905
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26602985 acaaggagcttatgaatttatgtaacctctttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 26602905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 35782687 - 35782607
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  35782687 acaaggagcttatgaatttatgtaacctcattcgattctctct-ggatccactttttcaaaacatgtattttaattataatt 35782607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 27421121 - 27421217
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| ||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  27421121 aaacatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaattgctatatacttatcttaccaaagtaacacacataactaa 27421217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 33491239 - 33491159
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  33491239 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggattcactttttcaaaacatatattttaattataatt 33491159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 24105714 - 24105635
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataat 81  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  24105714 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggaaccactttttcaaaacatatattttaattataat 24105635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16069518 - 16069592
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  16069518 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 16069592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 16737490 - 16737416
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  16737490 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 16737416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19358691 - 19358761
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  19358691 acaaggagcttatgaatttatgtaatctccttcgattctctc-tggatccactttttcaaaacatatatttt 19358761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 31883309 - 31883383
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  31883309 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 31883383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 35420368 - 35420273
Alignment:
Q  60 aaacatatattttaattataatt-----atatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||     || |||| |||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  35420368 aaacatatattttaattataatttagttatctttgacggtgcatgagtaacaaaattgttatatacttatcttaccaaaataacacacataactaa 35420273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 19358788 - 19358885
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  19358788 aaaacatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaattgatatatacttatcttactaaagtaacacatgtaactaa 19358885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 3921748 - 3921820
Alignment:
Q  3 aaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  3921748 aaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 3921820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 4121198 - 4121286
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacaca 141  Q
    |||||||||||||||||||||||      ||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  4121198 aaaacatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaattgctatatacttatcttactaaagtaacaca 4121286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 8374285 - 8374198
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacaca 141  Q
    ||||||||||||||||||||||      ||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  8374285 aaacatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaattgttatatacttatcttactaaattaacaca 8374198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33991305 - 33991376
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  33991305 acaaggagcttatgaatttatgtaacctcattcgattctctc-tggattcactttttcaaaacatatatttta 33991376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1579201 - 1579275
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  1579201 acaaggagcttatgaatttatgtaacctccttcgattctct-ttgaatccactttttcaaaacatatattttaatt 1579275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1605614 - 1605540
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  1605614 acaaggagcttatgaatttatgtaacctccttcgattctct-ttgaatccactttttcaaaacatatattttaatt 1605540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35420467 - 35420393
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    |||| |||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  35420467 acaaagagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 35420393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 3386432 - 3386335
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  3386432 aaaacatatattttaattataatgttagttatttttggttgtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacacgtaactaa 3386335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 27679098 - 27679029
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| || |||||||    
T  27679098 ttatctttggcggtgcatcagtaacaaaattgctatatacttatcttactaaagtaacaaacgtaactaa 27679029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 33491125 - 33491056
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||| || |||||||    
T  33491125 ttatctttggcggtgcatcaataacaaaattgttatatacttatcttactaaagtaacaaacgtaactaa 33491056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4121102 - 4121173
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| || |||||||||| |||||||||||||||||||||||||||||    
T  4121102 acaaggagcttatgaatttatgtaacctcctttgattctctct-ggatccactttttcaaaacatatatttta 4121173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 147
Target Start/End: Complemental strand, 9008001 - 9007907
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  9008001 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacacgtaac 9007907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 27421023 - 27421097
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | |||||||||||||| | ||||||||| |||| ||||||||||||||||||    
T  27421023 acaaggagcttatgaatttatgtaacctcattcgattctc-cctggatccacatttttaaaacatatattttaatt 27421097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 146
Target Start/End: Original strand, 1579299 - 1579390
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataa 146  Q
    ||||||||||||||||||||||      ||| ||||||| ||||| ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  1579299 aaacatatattttaattataatgttagttatctttggcg-tgcatgagtaacaaaattgctatatacttatcttaccaaagtaacacacataa 1579390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 146
Target Start/End: Complemental strand, 1605516 - 1605425
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataa 146  Q
    ||||||||||||||||||||||      ||| ||||||| ||||| ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  1605516 aaacatatattttaattataatgttagttatctttggcg-tgcatgagtaacaaaattgctatatacttatcttaccaaagtaacacacataa 1605425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 3921844 - 3921940
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| |||| |||| ||| | ||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  3921844 aaacatatattttaattataatgttagttatctttgacggtacatgaataacaaaattgctatatacttatcttaccaaagtaacacacataactaa 3921940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 26602872 - 26602811
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacac 142  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  26602872 ttatctttggcggtgcatgagtaacaaaattgatatatacttatcttactaaactaacacac 26602811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 35782574 - 35782505
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| |||||||||| || ||||||||||||||||||||||||||||  |||||||    
T  35782574 ttatctttggcggtgcatgagtaacaaaactgatatatacttatcttactaaagtaacacatgtaactaa 35782505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8374381 - 8374311
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||| ||||||| | ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  8374381 acaaggagcttatga-tttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatatttta 8374311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 16069640 - 16069712
Alignment:
Q  78 taattatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||| |||||  |||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  16069640 taattatctttggttgtgcatgattaacaaaattgctatatacttatcttactaaagtaacacacgtaactaa 16069712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 60 - 141
Target Start/End: Original strand, 33991395 - 33991482
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacaca 141  Q
    ||||||||||||||||||||||      ||| ||||||| ||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  33991395 aaacatatattttaattataatgttagttatctttggcgatgcatgagtaacaaaattgctatatacttatcttaataaagtaacaca 33991482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 3386529 - 3386459
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||| ||||||||||||| | ||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  3386529 acaaggagcctatgaatttatgtaacctccttcgattatctct-ggatccactttttcaaaacatatatttt 3386459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 9008100 - 9008030
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||  |||||||||||| |||||| ||||||||||||||||||||||    
T  9008100 acaaggagcttatgaatttatgtaaccttcttcgattctctc-tggatctactttttcaaaacatatatttt 9008030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 20992189 - 20992119
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | | | |||||||||||| |||||||||||||||||||||||| ||||    
T  20992189 acaaggagcttatgaatttatgtaacccccttcgattctctc-tggatccactttttcaaaacatatttttt 20992119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 38598493 - 38598419
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||  |||||||||||| |||||||  ||||||||||||||||||||||||    
T  38598493 acaaggagcttatgaatttatgtaaccttcttcgattctctc-tggatccgttttttcaaaacatatattttaatt 38598419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 16737392 - 16737296
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||||||||||||||||||||      ||| |||| |||| ||| ||||||||||||| |||||||||||||||  ||||||||| ||||||||||    
T  16737392 aaacatatattttaattataatgttagttatctttgacggtacatgagtaacaaaattgctatatacttatcttatcaaagtaacatacataactaa 16737296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 24105600 - 24105542
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaaca 139  Q
    |||| ||||||||||||| |||||| |||||  ||||||||||||||||||||||||||    
T  24105600 ttatctttggcggtgcatcagtaacgaaattactatatacttatcttactaaagtaaca 24105542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 38598354 - 38598297
Alignment:
Q  93 gtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||| ||| ||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  38598354 gtgcatgagtcacaaaattgctatatacttatcttattaaagtaacacacgtaactaa 38598297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5203137 - 5203200
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacata 66  Q
    ||||||||||||||||||||||| | ||  |||||||||||| | ||||||| |||||||||||||    
T  5203137 acaaggagcttatgaatttatgtcaccttcttcgattctctc-tagatccac-ttttcaaaacata 5203200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 6174871 - 6174723
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataattatatttggcggtgcataa 100  Q
    |||||||||||||||||||| |||| ||| ||||||||||||| |||||||| |||||||||||| |||||||||||||||| | ||||||| ||||| |    
T  6174871 acaaggagcttatgaatttacgtgacctccttcgattctctct-ggatccacattttcaaaacatgtattttaattataattgtctttggcgttgcatca 6174773  T
Q  101 gtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||| |||||  ||||||||||||||||||||||||||||| |||||||    
T  6174772 gtaaccaaattactatatacttatcttactaaagtaacacacgtaactaa 6174723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 19901181 - 19901027
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataat------tatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| ||||||||| ||| | |||||||||||||||||||||||||||||||||||      ||| |||||||||    
T  19901181 acaaggagcttatgaatttatgtaacctctttcgattctttctag-atccactttttcaaaacatatattttaattataatgttagttatctttggcggt 19901083  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  19901082 gcatgagtaacaaaattgttatatacttatcttactaaagtaacacatgtaactaa 19901027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 19383978 - 19383828
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta--attataattatatttggcggtgcat 98  Q
    ||||||||||||||||||||||| | ||| ||||||||||| |||||||||||||||||||||||||||||||  ||  || |||| |||||||| || |    
T  19383978 acaaggagcttatgaatttatgtaacctccttcgattctct-ttggatccactttttcaaaacatatattttataatgttagttatctttggcggggcgt 19383880  T
Q  99 aagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
     |||||||||||||||||||||||||||||||||| ||||| || |||||||    
T  19383879 gagtaacaaaattgttatatacttatcttactaaattaacaaacgtaactaa 19383828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 16066335 - 16066186
Alignment:
Q  3 aaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggtgc 96  Q
    ||||||||||||||||||||| | ||| ||||||  ||||| ||||||||||||||||||||||||||||||||||||      |||| ||| |||||||    
T  16066335 aaggagcttatgaatttatgtaacctccttcgataatctct-ggatccactttttcaaaacatatattttaattataatgttagttatctttagcggtgc 16066237  T
Q  97 ataagtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    || ||||||||||||| |||||| ||||||||||| | |||||||||||||    
T  16066236 atgagtaacaaaattgctatatatttatcttactacactaacacacataac 16066186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 429978 - 430132
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||||||||||||| | ||| |||||||||| || ||||||||||||||||||||||||||||||||||||      |||| |||| | ||    
T  429978 acaaggagcttatgaatttatgtaacctctttcgattctcgct-ggatccactttttcaaaacatatattttaattataatgttagttatctttgacagt 430076  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| |||||| |||| |||||||| |||||||  |||||||    
T  430077 gcatgagtaacaaaattgctatatatttatattactaaattaacacaggtaactaa 430132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 851159 - 851312
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta----attataattatatttggcggt-g 95  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||    ||| |||||||| |    | |      
T  851159 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatattttataatattttaattataatgttagttat 851257  T
Q  96 cataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||| ||||||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  851258 catgagtaacaaaattgctatatacttatcttaataaagtaacacacgtaactaa 851312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 44947592 - 44947439
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||| || |||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||      |||| |||||| ||    
T  44947592 acaagaagtttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatgttagttatctttggcagt 44947494  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    ||||  ||||| |||||| |||||| ||||||||||||| |||||||  |||||||    
T  44947493 gcatgggtaac-aaattgctatatatttatcttactaaattaacacatgtaactaa 44947439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 31517144 - 31517075
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31517144 ttatctttggcggtgcatgagtaacaaaattgttatatacttatcttactaaagtaacacacgtaactaa 31517075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 39635614 - 39635768
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    |||| |||||||| ||||||||| | ||| ||||||||||||| | || |||||||||||||||||||||||||||||||      |||| ||||| |||    
T  39635614 acaacgagcttatcaatttatgtaacctccttcgattctctctag-attcactttttcaaaacatatattttaattataatgttagttatctttggtggt 39635712  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| ||  || |||| ||||||||||||||||  |||||||    
T  39635713 gcattagtaacaaaattgctagttaattatattactaaagtaacacatgtaactaa 39635768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 2178812 - 2178734
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa 80  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  2178812 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggattcactttttcaaaacatatattttaattataa 2178734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 26323229 - 26323159
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||    
T  26323229 acaaggagcttatgaatttatgtaacctcattcgattctctc-tggatccactttttcaaaacatatatttt 26323159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 31517256 - 31517178
Alignment:
Q  3 aaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||| | ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  31517256 aaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaagatatattttaattataatt 31517178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 42937882 - 42937956
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaatt 76  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  42937882 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaatt 42937956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 26323130 - 26323033
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26323130 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgttatatacttatcttactaaagtaacacacgtaactaa 26323033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 28329882 - 28329802
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||| ||||||||||||| | ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  28329882 acaaggagcatatgaatttatgtaacctccttcgattctttct-ggatccactttttcaaaacatatattttaattataatt 28329802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 1482853 - 1482766
Alignment:
Q  60 aaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacaca 141  Q
    ||||||||||||||||||||||      ||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1482853 aaacatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaattgctatatacttatcttactaaagtaacaca 1482766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4016201 - 4016272
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  4016201 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttta 4016272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30270722 - 30270651
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| ||||| ||||||| |||| ||||||||||||||||||||||||||||||    
T  30270722 acaaggagcttatgaatttatgtaatctccttcgattatctc-tggatccactttttcaaaacatatatttta 30270651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 3873287 - 3873217
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||| | | |||||||||||||||| |||||||||||||||||||||||||||||    
T  3873287 acaaggagcttatgaatttatataacctcattcgattctctc-tggatccactttttcaaaacatatatttt 3873217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 18806927 - 18806857
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||||||||||||||    
T  18806927 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttt 18806857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 3873187 - 3873090
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  3873187 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgtcatatacttatcttactaaagtaacacacgtaactaa 3873090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5733561 - 5733632
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||  | ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  5733561 acaaggagcttatgaatttatgcaacctccttcgattctctct-ggatccactttttcaaaacatatatttta 5733632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 33905993 - 33905896
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  33905993 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacatgtaactaa 33905896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 42937981 - 42938078
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||| ||||||||||||||      ||| |||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  42937981 aaaacatacattttaattataatgttagttatctttggttgtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacacgtaactaa 42938078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 28329768 - 28329700
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataacta 149  Q
    |||| ||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| | ||||||    
T  28329768 ttatctttggtggtgcatgagtaacaaaattgctatatacttatcttactaaagtaacacgcgtaacta 28329700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 1109526 - 1109623
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||||||||      ||| |||||  |||||| ||||| ||||||| |||||||||||| |||||||||||||||| |||||||    
T  1109526 aaaacatatattttaattataatgttagttatctttggttgtgcatgagtaataaaattgctatatacttatcatactaaagtaacacacgtaactaa 1109623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 4016297 - 4016386
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatc-ttactaaagtaacaca 141  Q
    |||||||||||||||||||||||      ||| |||||||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  4016297 aaaacatatattttaattataatgttagttatctttggcggtgcatggataacaaaattgttatatacttatctttactaaagtaacaca 4016386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4232185 - 4232116
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattt 71  Q
    |||| |||||||||||||||||| | ||||||||||| |||| || |||||||||||||||||||||||||    
T  4232185 acaaagagcttatgaatttatgtaacctcattcgattatctc-tgaatccactttttcaaaacatatattt 4232116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 5733686 - 5733755
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||| ||||||||||||||||||||||| |||||  ||||||||||||||||||| || |||||||    
T  5733686 ttatctttagcggtgcataagtaacaaaattgctatatgtttatcttactaaagtaacatacttaactaa 5733755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 18806826 - 18806738
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacaca 141  Q
    |||||||||||||||||||||||      ||| |||||  || ||| ||||||||||||| ||||||||||||||||||||||||||||    
T  18806826 aaaacatatattttaattataatgttagttatctttggttgtacatgagtaacaaaattgctatatacttatcttactaaagtaacaca 18806738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 33906088 - 33906020
Alignment:
Q  3 aaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||| | ||| ||||||| ||||| ||||||||||||||||||||||| ||||    
T  33906088 aaggagcttatgaatttatgtaacctccttcgattatctct-ggatccactttttcaaaacatatttttt 33906020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 2178699 - 2178630
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||| ||||||||  ||||||||||||| ||||||||||||||||||||| ||||||  |||||||    
T  2178699 ttatcttttgcggtgcacgagtaacaaaattgctatatacttatcttactaaagcaacacagctaactaa 2178630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30420222 - 30420159
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacat 65  Q
    ||||||||||||||||||||||| | | | ||||||||||||  |||||||||||||||||||||    
T  30420222 acaaggagcttatgaatttatgtaacccccttcgattctctc-aggatccactttttcaaaacat 30420159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 16588817 - 16588750
Alignment:
Q  3 aaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattt 71  Q
    |||||||||||||||| |||| | |||  |||||| ||||| | |||||||||||||||||||||||||    
T  16588817 aaggagcttatgaattaatgtaacctccgtcgattatctct-gaatccactttttcaaaacatatattt 16588750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1482946 - 1482883
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacat 65  Q
    ||||||||||||||||||||||| |  || |||||||||||| || ||| || ||||||||||||    
T  1482946 acaaggagcttatgaatttatgtaacatccttcgattctctc-tgtatctacattttcaaaacat 1482883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 145288 - 145134
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataa------ttatatttggcggt 94  Q
    ||||||||||||| ||||||||| | ||| ||||||||||||| | ||||||||||||||||||||||||||||||||||      |||| ||||| |||    
T  145288 acaaggagcttataaatttatgtaacctccttcgattctctctag-atccactttttcaaaacatatattttaattataatgttagttatctttggtggt 145190  T
Q  95 gcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||||||||||||||||  |||||||||||||||||||  ||| |||| |||||||    
T  145189 gcataagtaacaaaattactatatacttatcttactaatttaaaacacgtaactaa 145134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 36867 - 36947
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatattttaattataatt 82  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36867 acaaggagcttatgaatttatgtaacctccttcgattctctct-ggatccactttttcaaaacatatattttaattataatt 36947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 36982 - 37051
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| || |||||||    
T  36982 ttatctttggcggtgcatcagtaacaaaattgctatatacttatcttactaaagtaacaaacgtaactaa 37051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 338 - 267
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  338 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccactttttcaaaacatatatttta 267  T

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Target: scaffold0444 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 24 - 93
Alignment:
Q  81 ttatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  24 ttatctttggcggtgcatgaataacaaaattgttatatacttatcttactaaagtaacacatgtaactaa 93  T

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Target: scaffold0172 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10400 - 10471
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttta 73  Q
    ||||||||||||||||||||||| | ||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  10400 acaaggagcttatgaatttatgtaacctccttcgattctctc-tggatccacattttcaaaacatatatttta 10471  T

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Target: scaffold0172; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 10497 - 10594
Alignment:
Q  59 aaaacatatattttaattataat------tatatttggcggtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataactaa 150  Q
    |||| ||||||||||||||||||      ||| ||||||||||||| ||||||||||||  ||||| ||||||||||||||||||||||  |||||||    
T  10497 aaaaaatatattttaattataatgttagttatctttggcggtgcatgagtaacaaaattactatattcttatcttactaaagtaacacatgtaactaa 10594  T

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Target: scaffold0920 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0920
Description:

Target: scaffold0920; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 3872 - 3942
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctcttggatccactttttcaaaacatatatttt 72  Q
    ||||||||||||||||||||||| | ||| || |||||||||| ||||||||||||||||||||||||||||    
T  3872 acaaggagcttatgaatttatgtaacctcttttgattctctct-ggatccactttttcaaaacatatatttt 3942  T

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Target: scaffold0920; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 4009 - 4063
Alignment:
Q  93 gtgcataagtaacaaaattgttatatacttatcttactaaagtaacacacataac 147  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  4009 gtgcatgagtaacaaaattattatatacttatcttactaaagtaacacacgtaac 4063  T

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Target: scaffold1777 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1777
Description:

Target: scaffold1777; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 49 - 7
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctct 43  Q
    ||||||||||||||||||||||| | ||| |||||||||||||    
T  49 acaaggagcttatgaatttatgtaacctccttcgattctctct 7  T

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Target: scaffold0038 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 49 - 7
Alignment:
Q  1 acaaggagcttatgaatttatgtgatctcattcgattctctct 43  Q
    ||||||||||||||||||||||| | ||| |||||||||||||    
T  49 acaaggagcttatgaatttatgtaacctccttcgattctctct 7  T

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