View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20116_high_85 (Length: 207)
Name: NF20116_high_85
Description: NF20116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20116_high_85 |
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Alignment Details
Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 18 - 188
Target Start/End: Complemental strand, 11409575 - 11409405
Alignment:
| Q |
18 |
atgaaagcaaagagtgagaggtaaaaatagatagaagttgtgtacaatatgacgatggtgaaggatgccttatataggtttatgtgtggagtcgttggag |
117 |
Q |
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| T |
11409575 |
atgaaagcaaagagtgagaggtaaaaatagatagaagttgtgtaccatatgacgatggtgaaggatgccttatataggtttatgtgtggagtcgttggag |
11409476 |
T |
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| Q |
118 |
tattgatgagaagttcttatgatcgatgttttatcaattgaaggttttcaacattcgataggagtcgtttg |
188 |
Q |
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| T |
11409475 |
tattgatgagaagttattatgatcgatgttttatcaattgaaggctttcaacgttcgataggagtcgtttg |
11409405 |
T |
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