View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20116_low_48 (Length: 315)

Name: NF20116_low_48
Description: NF20116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20116_low_48
NF20116_low_48
[»] chr4 (40 HSPs)
chr4 (1-293)||(41526466-41526762)
chr4 (73-291)||(13792529-13792748)
chr4 (54-293)||(6405306-6405548)
chr4 (54-293)||(30651932-30652174)
chr4 (73-293)||(16058622-16058845)
chr4 (178-293)||(16629887-16630003)
chr4 (187-293)||(11477251-11477357)
chr4 (178-291)||(14600263-14600377)
chr4 (187-296)||(16397242-16397351)
chr4 (190-293)||(15622376-15622480)
chr4 (178-293)||(9835661-9835777)
chr4 (178-293)||(19918550-19918667)
chr4 (52-109)||(41526748-41526804)
chr4 (225-293)||(3487277-3487345)
chr4 (225-293)||(3496600-3496668)
chr4 (225-293)||(5292738-5292806)
chr4 (225-293)||(5302397-5302465)
chr4 (225-293)||(6692569-6692637)
chr4 (225-293)||(6702975-6703043)
chr4 (225-293)||(16249797-16249865)
chr4 (178-293)||(17827767-17827883)
chr4 (178-293)||(17837158-17837274)
chr4 (178-293)||(17984466-17984582)
chr4 (178-293)||(18105016-18105132)
chr4 (225-293)||(21856046-21856114)
chr4 (225-293)||(21911909-21911977)
chr4 (225-293)||(27680401-27680469)
chr4 (225-293)||(27690056-27690124)
chr4 (225-293)||(40922194-40922262)
chr4 (178-293)||(10422123-10422239)
chr4 (225-293)||(21846454-21846522)
chr4 (225-293)||(21902317-21902385)
chr4 (178-292)||(16210760-16210875)
chr4 (187-293)||(2829877-2829983)
chr4 (225-293)||(16253710-16253778)
chr4 (187-293)||(17161552-17161656)
chr4 (225-291)||(15670442-15670508)
chr4 (225-286)||(52499459-52499520)
chr4 (225-293)||(521848-521916)
chr4 (1-52)||(11477398-11477450)
[»] chr6 (28 HSPs)
chr6 (52-291)||(27786979-27787219)
chr6 (73-293)||(22223066-22223288)
chr6 (73-293)||(22248901-22249123)
chr6 (178-293)||(18705929-18706045)
chr6 (178-293)||(18711864-18711980)
chr6 (178-291)||(16321664-16321778)
chr6 (178-291)||(16333812-16333926)
chr6 (178-293)||(1597157-1597273)
chr6 (187-285)||(26168764-26168862)
chr6 (178-293)||(14791953-14792069)
chr6 (178-293)||(24921595-24921711)
chr6 (178-293)||(24930631-24930747)
chr6 (225-293)||(3286197-3286265)
chr6 (225-293)||(12455404-12455472)
chr6 (225-293)||(16898297-16898365)
chr6 (225-293)||(16908950-16909018)
chr6 (225-293)||(18160412-18160480)
chr6 (225-293)||(18170224-18170292)
chr6 (178-293)||(18201542-18201658)
chr6 (225-293)||(20912633-20912701)
chr6 (225-293)||(31357911-31357979)
chr6 (225-293)||(31367640-31367708)
chr6 (225-291)||(29540793-29540859)
chr6 (178-238)||(19361297-19361358)
chr6 (178-293)||(26020358-26020474)
chr6 (178-276)||(20968208-20968307)
chr6 (2-50)||(15503937-15503986)
chr6 (225-293)||(34765699-34765767)
[»] chr8 (19 HSPs)
chr8 (52-293)||(2689755-2689997)
chr8 (87-293)||(20851831-20852038)
chr8 (178-293)||(31991243-31991359)
chr8 (178-291)||(14881277-14881391)
chr8 (178-290)||(17269169-17269282)
chr8 (178-293)||(14893627-14893743)
chr8 (178-285)||(33773720-33773828)
chr8 (178-293)||(31998832-31998948)
chr8 (225-297)||(13674933-13675005)
chr8 (225-293)||(9324676-9324744)
chr8 (225-293)||(21202476-21202544)
chr8 (225-293)||(21212892-21212960)
chr8 (225-293)||(21334649-21334717)
chr8 (225-293)||(21987580-21987648)
chr8 (227-293)||(21997116-21997182)
chr8 (187-293)||(23014645-23014751)
chr8 (178-238)||(23474146-23474207)
chr8 (178-293)||(20530911-20531027)
chr8 (225-296)||(11430307-11430378)
[»] chr7 (39 HSPs)
chr7 (148-293)||(15988224-15988369)
chr7 (57-291)||(14247981-14248222)
chr7 (189-291)||(2991499-2991601)
chr7 (178-293)||(45553556-45553672)
chr7 (178-293)||(19586098-19586214)
chr7 (178-291)||(24540412-24540526)
chr7 (84-293)||(12770431-12770641)
chr7 (179-291)||(12491686-12491799)
chr7 (178-293)||(27989192-27989308)
chr7 (189-291)||(12515491-12515593)
chr7 (225-293)||(5381458-5381526)
chr7 (225-293)||(5391096-5391164)
chr7 (225-293)||(5927486-5927554)
chr7 (225-293)||(6534835-6534903)
chr7 (225-293)||(6545156-6545224)
chr7 (225-293)||(11626007-11626075)
chr7 (225-293)||(16131557-16131625)
chr7 (225-293)||(16142106-16142174)
chr7 (225-293)||(26307466-26307534)
chr7 (225-293)||(26362844-26362912)
chr7 (225-293)||(43983828-43983896)
chr7 (225-293)||(44908071-44908139)
chr7 (225-293)||(46497465-46497533)
chr7 (225-293)||(46508077-46508145)
chr7 (227-293)||(44897646-44897712)
chr7 (225-293)||(8501400-8501468)
chr7 (225-293)||(8511870-8511938)
chr7 (178-293)||(9534835-9534951)
chr7 (178-293)||(9545118-9545234)
chr7 (225-293)||(15372199-15372267)
chr7 (225-293)||(32098731-32098799)
chr7 (225-293)||(32109168-32109236)
chr7 (73-130)||(15988164-15988224)
chr7 (60-140)||(9007443-9007526)
chr7 (225-293)||(14944606-14944674)
chr7 (1-50)||(14248019-14248069)
chr7 (2-54)||(2991405-2991458)
chr7 (225-293)||(7019058-7019126)
chr7 (225-293)||(7034420-7034488)
[»] scaffold0016 (1 HSPs)
scaffold0016 (180-293)||(15797-15910)
[»] chr5 (34 HSPs)
chr5 (180-293)||(23376555-23376668)
chr5 (178-293)||(13571466-13571582)
chr5 (178-293)||(27273967-27274083)
chr5 (178-293)||(31917166-31917282)
chr5 (178-293)||(37298600-37298716)
chr5 (178-293)||(37817952-37818068)
chr5 (178-291)||(22173038-22173152)
chr5 (178-293)||(4037765-4037881)
chr5 (178-293)||(20764708-20764824)
chr5 (178-293)||(32070791-32070907)
chr5 (178-289)||(42090304-42090416)
chr5 (225-293)||(27580093-27580161)
chr5 (189-293)||(34130287-34130391)
chr5 (225-293)||(8765007-8765075)
chr5 (225-293)||(11410751-11410819)
chr5 (225-293)||(18209291-18209359)
chr5 (225-293)||(18218629-18218697)
chr5 (225-293)||(18361628-18361696)
chr5 (225-293)||(18390585-18390653)
chr5 (225-293)||(21682349-21682417)
chr5 (225-293)||(21753794-21753862)
chr5 (225-293)||(21763081-21763149)
chr5 (225-293)||(26191665-26191733)
chr5 (225-293)||(26202247-26202315)
chr5 (178-293)||(27412499-27412615)
chr5 (178-293)||(30943253-30943369)
chr5 (178-293)||(30952675-30952791)
chr5 (225-293)||(33939668-33939736)
chr5 (225-293)||(33950068-33950136)
chr5 (178-297)||(37538362-37538482)
chr5 (187-293)||(205275-205381)
chr5 (178-293)||(19887825-19887941)
chr5 (178-297)||(37647473-37647593)
chr5 (187-293)||(19780938-19781044)
[»] scaffold0142 (2 HSPs)
scaffold0142 (52-296)||(28255-28502)
scaffold0142 (1-54)||(28298-28352)
[»] scaffold0031 (1 HSPs)
scaffold0031 (178-293)||(111366-111482)
[»] chr2 (28 HSPs)
chr2 (178-293)||(45191191-45191307)
chr2 (173-291)||(21109608-21109727)
chr2 (187-285)||(37862649-37862747)
chr2 (178-291)||(69698-69812)
chr2 (178-293)||(16902089-16902205)
chr2 (178-293)||(16995480-16995596)
chr2 (178-293)||(12570939-12571054)
chr2 (178-285)||(22687261-22687369)
chr2 (178-291)||(44638533-44638647)
chr2 (225-293)||(2998257-2998325)
chr2 (225-293)||(4458546-4458614)
chr2 (225-293)||(4468171-4468239)
chr2 (225-293)||(5336695-5336763)
chr2 (225-293)||(5346548-5346616)
chr2 (225-293)||(9502320-9502388)
chr2 (225-293)||(9513686-9513754)
chr2 (225-293)||(17489041-17489109)
chr2 (225-293)||(18651569-18651637)
chr2 (225-293)||(18663687-18663755)
chr2 (178-293)||(24696097-24696213)
chr2 (178-293)||(45015061-45015177)
chr2 (178-291)||(38957362-38957476)
chr2 (225-293)||(574619-574687)
chr2 (178-293)||(45025160-45025276)
chr2 (178-293)||(3605514-3605630)
chr2 (178-296)||(15475075-15475195)
chr2 (225-293)||(38930063-38930131)
chr2 (197-260)||(24234196-24234259)
[»] chr1 (26 HSPs)
chr1 (178-293)||(26193039-26193155)
chr1 (187-291)||(18058683-18058787)
chr1 (178-293)||(20314785-20314901)
chr1 (178-293)||(27066434-27066550)
chr1 (178-293)||(20317633-20317749)
chr1 (178-293)||(20328115-20328231)
chr1 (178-293)||(18383708-18383824)
chr1 (187-279)||(25039014-25039106)
chr1 (187-279)||(25044226-25044318)
chr1 (178-291)||(2117206-2117320)
chr1 (178-291)||(2370021-2370135)
chr1 (178-279)||(18096525-18096627)
chr1 (178-290)||(13965215-13965328)
chr1 (1-110)||(18058500-18058604)
chr1 (178-293)||(16155234-16155350)
chr1 (225-293)||(21458979-21459047)
chr1 (67-109)||(18058472-18058514)
chr1 (178-293)||(34823303-34823419)
chr1 (225-297)||(30549269-30549341)
chr1 (225-293)||(42034523-42034591)
chr1 (178-291)||(25019821-25019935)
chr1 (225-290)||(22961246-22961311)
chr1 (187-279)||(25823053-25823145)
chr1 (225-279)||(4950893-4950947)
chr1 (225-291)||(19748221-19748287)
chr1 (187-284)||(37012353-37012450)
[»] scaffold1705 (1 HSPs)
scaffold1705 (187-293)||(1257-1363)
[»] scaffold0034 (1 HSPs)
scaffold0034 (187-293)||(7781-7887)
[»] scaffold0591 (1 HSPs)
scaffold0591 (52-208)||(1378-1536)
[»] scaffold0553 (1 HSPs)
scaffold0553 (178-293)||(441-557)
[»] chr3 (24 HSPs)
chr3 (178-293)||(10508277-10508393)
chr3 (73-238)||(11459536-11459702)
chr3 (178-293)||(19827825-19827941)
chr3 (178-293)||(13119215-13119331)
chr3 (178-293)||(20492374-20492490)
chr3 (178-297)||(4023732-4023852)
chr3 (178-293)||(10011808-10011924)
chr3 (178-293)||(20744656-20744772)
chr3 (178-293)||(25433186-25433302)
chr3 (225-293)||(11635-11703)
chr3 (225-293)||(1684900-1684968)
chr3 (178-293)||(2488827-2488943)
chr3 (225-293)||(4371706-4371774)
chr3 (225-293)||(4381447-4381515)
chr3 (178-293)||(4782218-4782334)
chr3 (225-293)||(5655275-5655343)
chr3 (225-293)||(8973197-8973265)
chr3 (225-293)||(8983752-8983820)
chr3 (225-293)||(9537486-9537554)
chr3 (225-293)||(9547812-9547880)
chr3 (178-293)||(16335014-16335130)
chr3 (178-293)||(6433079-6433195)
chr3 (178-293)||(6422652-6422768)
chr3 (225-293)||(51978436-51978504)
[»] scaffold0005 (2 HSPs)
scaffold0005 (178-291)||(217001-217115)
scaffold0005 (178-293)||(309621-309737)
[»] scaffold0122 (1 HSPs)
scaffold0122 (189-293)||(23516-23620)
[»] scaffold0121 (1 HSPs)
scaffold0121 (84-296)||(6521-6733)
[»] scaffold0058 (2 HSPs)
scaffold0058 (178-285)||(50088-50196)
scaffold0058 (187-291)||(28894-28998)
[»] scaffold0811 (1 HSPs)
scaffold0811 (87-293)||(2995-3202)
[»] scaffold0014 (3 HSPs)
scaffold0014 (178-293)||(114132-114248)
scaffold0014 (178-293)||(147045-147161)
scaffold0014 (225-293)||(233638-233706)
[»] scaffold0047 (1 HSPs)
scaffold0047 (178-293)||(74331-74447)
[»] scaffold0234 (1 HSPs)
scaffold0234 (227-297)||(20809-20879)
[»] scaffold0231 (1 HSPs)
scaffold0231 (187-285)||(16226-16324)
[»] scaffold0141 (1 HSPs)
scaffold0141 (178-285)||(19121-19226)
[»] scaffold0043 (1 HSPs)
scaffold0043 (179-293)||(92476-92591)
[»] scaffold0611 (1 HSPs)
scaffold0611 (178-293)||(8476-8592)
[»] scaffold0254 (1 HSPs)
scaffold0254 (225-293)||(7492-7560)
[»] scaffold0106 (1 HSPs)
scaffold0106 (178-291)||(16995-17109)
[»] scaffold0015 (1 HSPs)
scaffold0015 (225-291)||(197030-197096)
[»] scaffold0018 (3 HSPs)
scaffold0018 (150-293)||(54997-55137)
scaffold0018 (84-293)||(60374-60580)
scaffold0018 (171-293)||(58946-59067)
[»] scaffold0277 (1 HSPs)
scaffold0277 (178-293)||(18966-19082)
[»] scaffold0086 (1 HSPs)
scaffold0086 (225-293)||(55490-55558)
[»] scaffold0706 (1 HSPs)
scaffold0706 (178-293)||(1558-1674)
[»] scaffold0764 (1 HSPs)
scaffold0764 (225-293)||(430-498)
[»] scaffold0313 (2 HSPs)
scaffold0313 (225-293)||(6111-6179)
scaffold0313 (225-293)||(20268-20336)


Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 41526762 - 41526466
Alignment:
Q  1 gaattgatttacactacaagagacattt-gagatctcagtgatgatcaattcagagaagaatggaaggagaacttatccttaacaagataagaaagaatt 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41526762 gaattgatttacactacaagagacattttgagatctcagtgatgatcaattcagagaagaatggaaggagaacttatctttaacaagataagaaagaatt 41526663  T
Q  100 gatttacacttgaaaagactt---ggaatctttgtgatgatcaannnnnnngctaaagcttcacaacaatgctcttgttgtttttcttgttgctttgcaa 196  Q
     ||||||||||||||| ||||   ||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41526662 aatttacacttgaaaatacttcttggaatctttgtgatgatcaatttttttgctaaagcttcacaacaatgttcttgttgtttttcttgttgctttgcaa 41526563  T
Q  197 tggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| || |||| ||||| | |||||||||||||    
T  41526562 tggtgcaagtaatgctgagcctttcacttctatttatagagttcttgggctcttatagccgttggagtgtaaccattggtgatttgccatgtgtcct 41526466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 73 - 291
Target Start/End: Original strand, 13792529 - 13792748
Alignment:
Q  73 ttatccttaacaagataagaaagaattgatttacactt-gaaaagacttggaatctttgtgatgatcaannnnnnngctaaagcttcacaacaatgctct 171  Q
    ||||| |||||||||||||| ||||||||||||||||| || |  | ||| |||||  |||||||||||       |||||||||||||||||||| |||    
T  13792529 ttatctttaacaagataagagagaattgatttacacttcgagacaatttgaaatctcagtgatgatcaattttaacgctaaagcttcacaacaatgttct 13792628  T
Q  172 tgttgtttttcttgttgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgacca 271  Q
    |||||||| |||| |||||||||||| |||||||||||| ||||||| |||||||||||||||||||| || || |||| |||||||||||||||||| |    
T  13792629 tgttgtttctctttttgctttgcaatagtgcaagtaatgatgagcctctcacttctatttatagagttcttgggatcttgtagccgttggagggtgacta 13792728  T
Q  272 atggtgttgtgccatgtgtc 291  Q
    ||||| ||||||||||||||    
T  13792729 atggtcttgtgccatgtgtc 13792748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 54 - 293
Target Start/End: Original strand, 6405306 - 6405548
Alignment:
Q  54 agaagaatggaaggagaactt-atccttaacaagataagaaagaattgatttacacttgaaaagactt---ggaatctttgtgatgatcaannnnnnngc 149  Q
    ||||||||||| |||||| || ||| |||| ||||||||| | ||||||||||||||| |||||||||   | |||||| || ||||||||       ||    
T  6405306 agaagaatggagggagaagtttatctttaaaaagataagagataattgatttacactttaaaagacttcttgaaatcttagttatgatcaatttttttgc 6405405  T
Q  150 taaagcttcacaacaatgctcttgttgtttttcttgttgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctct 249  Q
    ||||| ||||||||| |  ||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||| || |||||||||| || ||||||    
T  6405406 taaagtttcacaacacttttct-gttgtttttcttgttgctttacaatggtgcaagtaatgatgtgcctttcacttatacttatagagttcttgggctct 6405504  T
Q  250 tatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    | ||||||||||| ||||||||||||| |||| |||||||||||    
T  6405505 tgtagccgttggaaggtgaccaatggtcttgttccatgtgtcct 6405548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 54 - 293
Target Start/End: Complemental strand, 30652174 - 30651932
Alignment:
Q  54 agaagaatggaaggagaactt-atccttaacaagataagaaagaattgatttacacttgaaaagactt---ggaatctttgtgatgatcaannnnnnngc 149  Q
    ||||||||||| |||||| || ||| |||| ||||||| | ||||||||||||||||| |||||||||   | ||||||||||||||||||       ||    
T  30652174 agaagaatggagggagaagtttatctttaaaaagataaaagagaattgatttacacttaaaaagacttattgaaatctttgtgatgatcaatttttt-gc 30652076  T
Q  150 taaagcttcacaacaatgctcttgttgtttttcttgttgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctct 249  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || ||| ||||   || |  ||||||||||||||| ||  ||  |    
T  30652075 taaagcttcacaacaatgttcttgctgtttttcttgttgctttgcaatggtgcatgttatgttgaggtcttgatctctatttatagagttcttgagcctt 30651976  T
Q  250 tatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    | || ||||||||| |||||||||||| |||||||| |||||||    
T  30651975 tgtaaccgttggagagtgaccaatggtcttgtgccacgtgtcct 30651932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 73 - 293
Target Start/End: Complemental strand, 16058845 - 16058622
Alignment:
Q  73 ttatccttaacaagataagaaagaattgatttacacttgaaaagactt---ggaatctttgtgatgatcaannnnnnngctaaagcttcacaac-aatgc 168  Q
    ||||| |||| ||||||||| | ||||||||||||||| |||||||||   ||||||||||||||||||||       |||||||||||||||| ||||     
T  16058845 ttatctttaaaaagataagagataattgatttacacttaaaaagacttcttggaatctttgtgatgatcaatttttt-gctaaagcttcacaactaatgt 16058747  T
Q  169 tcttgttgtttttcttgttgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtga 268  Q
    ||||||||||||||||||||||||||||||||||| || ||| ||||   || |  ||||||||||||||| ||  ||  || ||| |||||||| ||||    
T  16058746 tcttgttgtttttcttgttgctttgcaatggtgcatgttatgttgaggtattgatctctatttatagagttcttgagcctttgtagtcgttggagagtga 16058647  T
Q  269 ccaatggtgttgtgccatgtgtcct 293  Q
    |||||||| |||||||| |||||||    
T  16058646 ccaatggtcttgtgccacgtgtcct 16058622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 16630003 - 16629887
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  16630003 ttttcttgtatgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 16629904  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  16629903 gttatgccacgtgtcct 16629887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 11477357 - 11477251
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccat 286  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||| || ||||||| | ||||||||||| | |||| | || || ||||||    
T  11477357 tgctttgaaatggtgcaagtaatgctgagtctttcacttctatttatagagttcttgggctcttgttgccgttggaggataaccattagtcttctgccat 11477258  T
Q  287 gtgtcct 293  Q
    |||||||    
T  11477257 gtgtcct 11477251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 14600263 - 14600377
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| |  | ||||||||||||| || ||||| ||||||||||| | |||||||||||||    
T  14600263 ttttcttgtatgctttgcaatggtgcaagtaatgttgagcctttgatctttatttatagagtttttgggctcatatagccgttgtaaggtgaccaatggt 14600362  T
Q  277 gttgtgccatgtgtc 291  Q
    ||| ||||| |||||    
T  14600363 gttatgccacgtgtc 14600377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 187 - 296
Target Start/End: Complemental strand, 16397351 - 16397242
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccat 286  Q
    ||||||||||| |||||||||||| ||||||||  |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| ||||||    
T  16397351 tgctttgcaatagtgcaagtaatgttgagccttagatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccat 16397252  T
Q  287 gtgtcctagg 296  Q
    ||||||||||    
T  16397251 gtgtcctagg 16397242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 15622376 - 15622480
Alignment:
Q  190 tttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttg-gctcttatagccgttggagggtgaccaatggtgttgtgccatgt 288  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||||||||  ||| |||||| ||| | |||||| |||||||||||| |||||||||||    
T  15622376 tttgcaatggtgcaagtaatgttgagccttccacttctattaatagagtttcttgagctcttttagtcattggagagtgaccaatggtcttgtgccatgt 15622475  T
Q  289 gtcct 293  Q
    |||||    
T  15622476 gtcct 15622480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 9835661 - 9835777
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||| |  ||||||||||||||| || |||||  |||||| ||| |||||| ||||||||    
T  9835661 ttttcttgtatgctttgcaatggtgcaagtaatgttgagcatttgatctctatttatagagtttttgggctcacatagccattgtagggtgtccaatggt 9835760  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| || ||||||||||    
T  9835761 gttatgtcatgtgtcct 9835777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 19918667 - 19918550
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagt-tatttggctcttatagccgttggagggtgaccaatgg 275  Q
    ||||||||| ||||||| || |||||||||||||||||||||| ||||||||||||||| || | ||   ||||| |||| ||||||| |||| ||||||    
T  19918667 ttttcttgtatgctttgtaaaggtgcaagtaatgctgagccttccacttctatttatagggtgtcttgacctcttgtagctgttggagagtgagcaatgg 19918568  T
Q  276 tgttgtgccatgtgtcct 293  Q
    | ||||||||||| ||||    
T  19918567 tcttgtgccatgtttcct 19918550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 41526804 - 41526748
Alignment:
Q  52 agagaagaatggaaggagaacttatccttaacaagataagaaagaattgatttacact 109  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||    
T  41526804 agagaagaaaggaag-agaacttatctttaacaagataagaaagaattgatttacact 41526748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 3487277 - 3487345
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  3487277 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 3487345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 3496600 - 3496668
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  3496600 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 3496668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 5292738 - 5292806
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  5292738 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 5292806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 5302397 - 5302465
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  5302397 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 5302465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 6692637 - 6692569
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  6692637 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 6692569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 6703043 - 6702975
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  6703043 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 6702975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 16249865 - 16249797
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  16249865 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 16249797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 17827767 - 17827883
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| || ||||||||    
T  17827767 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgtccaatggt 17827866  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  17827867 gttatgccatgtgtcct 17827883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 17837158 - 17837274
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| || ||||||||    
T  17837158 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgtccaatggt 17837257  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  17837258 gttatgccatgtgtcct 17837274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 17984466 - 17984582
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| || ||||||||    
T  17984466 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgtccaatggt 17984565  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  17984566 gttatgccatgtgtcct 17984582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 18105016 - 18105132
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| || ||||||||    
T  18105016 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgtccaatggt 18105115  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  18105116 gttatgccatgtgtcct 18105132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 21856114 - 21856046
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  21856114 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 21856046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 21911977 - 21911909
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  21911977 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 21911909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 27680401 - 27680469
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  27680401 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 27680469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 27690056 - 27690124
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  27690056 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 27690124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 40922262 - 40922194
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  40922262 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 40922194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 10422239 - 10422123
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| || |  | |  ||||||||||||||  || | ||| |||||||| || |||||| ||||||||    
T  10422239 ttttcttgtatgctttgcaatggtgcaagttttgctaaggccatgatctctatttatagagtctttggactcatatagccgctgtagggtgtccaatggt 10422140  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  10422139 gttatgccatgtgtcct 10422123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 21846522 - 21846454
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||| ||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  21846522 tctatttatggagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 21846454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 21902385 - 21902317
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||| ||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  21902385 tctatttatggagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 21902317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 16210760 - 16210875
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| || |  | |  ||||||||||||||  ||  |||| ||||||||||| |||||| ||||||||    
T  16210760 ttttcttgtatgctttgcaatggtgcaagttttgctaaggccatgatctctatttatagagtctttgagctcatatagccgttgtagggtgtccaatggt 16210859  T
Q  277 gttgtgccatgtgtcc 292  Q
    ||| ||||| ||||||    
T  16210860 gttttgccacgtgtcc 16210875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 2829983 - 2829877
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccat 286  Q
    ||||||||||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| | |||  ||||||||||| |||||     
T  2829983 tgctttgcaatggtgcaagttttgctaaggcattgatctctatttatagagtctttgggctcatatagccgttgtaaggtacccaatggtgttatgccac 2829884  T
Q  287 gtgtcct 293  Q
    |||||||    
T  2829883 gtgtcct 2829877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 16253778 - 16253710
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| |||||||| || ||| |||||||||    
T  16253778 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtcttatgcgatgtgtcct 16253710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 17161656 - 17161552
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccat 286  Q
    ||||||||||||||||||||  |||| || |  | |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||  ||| ||||||    
T  17161656 tgctttgcaatggtgcaagttttgctaaggccatgaaatctatttatagagtctttgggctcatatagccgttgtagggtgtccaatg--gttatgccat 17161559  T
Q  287 gtgtcct 293  Q
    |||||||    
T  17161558 gtgtcct 17161552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 15670508 - 15670442
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtc 291  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| |||||| |||| | |||||||||    
T  15670508 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatgatgttataccatgtgtc 15670442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 52499520 - 52499459
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccat 286  Q
    ||||||||||||||  || ||||| ||||||||||| | |||| ||||||||||| ||||||    
T  52499520 tctatttatagagtctttgggctcatatagccgttgtatggtgtccaatggtgttatgccat 52499459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 521848 - 521916
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||| ||  ||  ||||||||||||||| ||||||| |||| || ||||| |||||||    
T  521848 tctatttatagagttcttgagcctttatagccgttggagagtgaccactggtcttatgccacgtgtcct 521916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11477450 - 11477398
Alignment:
Q  1 gaattgatttacactacaagagaca-tttgagatctcagtgatgatcaattca 52  Q
    |||||||||||||||  |||||||| ||| | |||||||||||||||||||||    
T  11477450 gaattgatttacactttaagagacaatttaaaatctcagtgatgatcaattca 11477398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 52 - 291
Target Start/End: Original strand, 27786979 - 27787219
Alignment:
Q  52 agagaagaatggaaggagaacttatccttaacaagataagaaagaattgatttacactt--gaaaagacttggaatctttgtgatgatcaannnnnnngc 149  Q
    |||||| |||||| |||||| || || |||||||||||||| |||||||||||||| ||  |||| || ||| ||||||  ||||||||||       ||    
T  27786979 agagaataatggagggagaaatt-tctttaacaagataagagagaattgatttacatttaagaaacgatttgaaatcttaatgatgatcaattcagatgc 27787077  T
Q  150 taaagcttcacaacaatgctcttgttgtttttcttgttgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctct 249  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||     
T  27787078 taaagcttcacaacaatgatcttgttgtttttcttgatgctttgcaatggtgcaagtaatgttgagcctttcacttctatttatagagttcttgggttcc 27787177  T
Q  250 tatagccgttggagggtgaccaatggtgttgtgccatgtgtc 291  Q
    | ||||||||| | |||||||||||||||| || ||||||||    
T  27787178 tgtagccgttgaaaggtgaccaatggtgttatgtcatgtgtc 27787219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 293
Target Start/End: Original strand, 22223066 - 22223288
Alignment:
Q  73 ttatccttaacaagataagaaagaattgatttacacttgaaaagactt---ggaatctttgtgatgatcaannnnnnngctaaagcttcacaacaatgct 169  Q
    ||||| |||| ||||||||| ||||||||||||||||| |||||||||   |||| |||||||||||||||       |||||| ||||||||||||| |    
T  22223066 ttatctttaaaaagataagagagaattgatttacacttaaaaagacttcttggaacctttgtgatgatcaatttttt-gctaaatcttcacaacaatgtt 22223164  T
Q  170 cttgttgtttttcttgttgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgac 269  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||   |  |  ||||||||||||||| ||   |  |||||| |||||||| |||||    
T  22223165 cttgttgtttttcttgttgctttgcaatggtgcatattatgctgaggtctcgatctctatttatagagttcttgatcatttatagtcgttggagagtgac 22223264  T
Q  270 caatggtgttgtgccatgtgtcct 293  Q
    || |||| || ||||| |||||||    
T  22223265 cactggtcttatgccacgtgtcct 22223288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 293
Target Start/End: Original strand, 22248901 - 22249123
Alignment:
Q  73 ttatccttaacaagataagaaagaattgatttacacttgaaaagactt---ggaatctttgtgatgatcaannnnnnngctaaagcttcacaacaatgct 169  Q
    ||||| |||| ||||||||| ||||||||||||||||| |||||||||   |||| |||||||||||||||       |||||| ||||||||||||| |    
T  22248901 ttatctttaaaaagataagagagaattgatttacacttaaaaagacttcttggaacctttgtgatgatcaatttttt-gctaaatcttcacaacaatgtt 22248999  T
Q  170 cttgttgtttttcttgttgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgac 269  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||   |  |  ||||||||||||||| ||   |  |||||| |||||||| |||||    
T  22249000 cttgttgtttttcttgttgctttgcaatggtgcatattatgctgaggtctcgatctctatttatagagttcttgatcatttatagtcgttggagagtgac 22249099  T
Q  270 caatggtgttgtgccatgtgtcct 293  Q
    || |||| || ||||| |||||||    
T  22249100 cactggtcttatgccacgtgtcct 22249123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 18705929 - 18706045
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||| ||||||||||||||||| ||||||||| |  ||||||||||||||| || ||||| ||||||| ||| | |||||||||||||    
T  18705929 ttttcttgtatgcttttcaatggtgcaagtaatgatgagcctttgatctctatttatagagtttttgggctcatatagccattgtaaggtgaccaatggt 18706028  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  18706029 gttatgccatgtgtcct 18706045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 18711864 - 18711980
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||| ||||||||||||||||| ||||||||| |  ||||||||||||||| || ||||| ||||||| ||| | |||||||||||||    
T  18711864 ttttcttgtatgcttttcaatggtgcaagtaatgttgagcctttgatctctatttatagagtttttgggctcatatagccattgtaaggtgaccaatggt 18711963  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  18711964 gttatgccatgtgtcct 18711980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 16321778 - 16321664
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||| ||||||||||||| ||||||||| |  ||||||||| ||||| || ||||| ||||||||||  | |||||| ||||||    
T  16321778 ttttcttgtatgctttgcaagggtgcaagtaatgttgagcctttaatctctatttattgagtttttgggctcatatagccgttttaaggtgacaaatggt 16321679  T
Q  277 gttgtgccatgtgtc 291  Q
    ||| |||||||||||    
T  16321678 gttatgccatgtgtc 16321664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 16333926 - 16333812
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||| ||||||||||||| ||||||||| |  ||||||||| ||||| || ||||| ||||||||||  | |||||| ||||||    
T  16333926 ttttcttgtatgctttgcaagggtgcaagtaatgttgagcctttaatctctatttattgagtttttgggctcatatagccgttttaaggtgacaaatggt 16333827  T
Q  277 gttgtgccatgtgtc 291  Q
    ||| |||||||||||    
T  16333826 gttatgccatgtgtc 16333812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 1597273 - 1597157
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  1597273 ttttcttgtatgctttgcaatggtgcaagttttgctaaggccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 1597174  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  1597173 gttatgccatgtgtcct 1597157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 26168862 - 26168764
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgcca 285  Q
    ||||||||||||||||||||| |||||||| ||| |  ||||||||||| ||| || ||||| ||||||||||| | |||||| ||||||||| |||||    
T  26168862 tgctttgcaatggtgcaagtagtgctgagcatttgatctctatttatagtgtttttgggctcatatagccgttgtaaggtgactaatggtgttatgcca 26168764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 14792069 - 14791953
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  14792069 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 14791970  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  14791969 gttatgccatgtgtcct 14791953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 24921595 - 24921711
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||| |||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  24921595 ttttcttgtatgctttgcaatggtgcgagttttgctaaggccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 24921694  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  24921695 gttatgccatgtgtcct 24921711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 24930631 - 24930747
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||| |||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  24930631 ttttcttgtatgctttgcaatggtgcgagttttgctaaggccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 24930730  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  24930731 gttatgccatgtgtcct 24930747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 3286265 - 3286197
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  3286265 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 3286197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 12455472 - 12455404
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  12455472 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 12455404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 16898365 - 16898297
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  16898365 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 16898297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 16909018 - 16908950
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  16909018 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 16908950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 18160480 - 18160412
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  18160480 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 18160412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 18170292 - 18170224
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  18170292 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 18170224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 18201658 - 18201542
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| || | || |  ||||||||| ||||  || ||||  ||||||||||| |||||| ||||||||    
T  18201658 ttttcttgtatgctttgcaatggtgcaagttttgctaaggccttgatctctatttatcgagtctttgggctaatatagccgttgtagggtgtccaatggt 18201559  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  18201558 gttatgccatgtgtcct 18201542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 20912701 - 20912633
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  20912701 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 20912633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 31357979 - 31357911
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  31357979 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 31357911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 31367708 - 31367640
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  31367708 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 31367640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 29540859 - 29540793
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtc 291  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||    
T  29540859 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtc 29540793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 19361358 - 19361297
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagt 238  Q
    ||||||||| ||||||||||  |||||||||||| |||||||||||||| ||||||||||||    
T  19361358 ttttcttgtatgctttgcaaaagtgcaagtaatgttgagcctttcacttttatttatagagt 19361297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 26020358 - 26020474
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||  ||| || ||||||||    
T  26020358 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttttaggatgtccaatggt 26020457  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||| ||||||    
T  26020458 gttatgccatatgtcct 26020474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 276
Target Start/End: Complemental strand, 20968307 - 20968208
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||| ||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  20968307 ttttcttgtatgctttgtaatggtgcaagttttgctaaggccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 20968208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 15503986 - 15503937
Alignment:
Q  2 aattgatttacactacaagagaca-tttgagatctcagtgatgatcaatt 50  Q
    ||||||||||||||| |||||| | ||||| |||||||||||||||||||    
T  15503986 aattgatttacactataagagagaatttgaaatctcagtgatgatcaatt 15503937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 34765767 - 34765699
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||| ||  ||  ||||||||||||||| ||||||| |||| || ||||| |||||||    
T  34765767 tctatttatagagttcttgagcctttatagccgttggagagtgaccactggtcttatgccacgtgtcct 34765699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 52 - 293
Target Start/End: Original strand, 2689755 - 2689997
Alignment:
Q  52 agagaagaatggaaggagaacttatccttaacaagataagaaagaattgatttacacttgaaaagac--ttggaa-tctttgtgatgatcaannnnnnng 148  Q
    ||||||||||| | |||||| ||||| ||||||| |||||| ||||||||||||||||| || | ||  |||||| |||| |||||||||||       |    
T  2689755 agagaagaatgaagggagaaattatctttaacaatataagagagaattgatttacacttaaagatacagttggaaatcttagtgatgatcaattcatatg 2689854  T
Q  149 ctaaagcttcacaacaatgctcttgttgtttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggct 247  Q
    ||||||||||| |||| |  ||  | |||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||    
T  2689855 ctaaagcttca-aacacttttca-gatgtttt-cttgtatgctttgcaatggtgcaagtaatgttgagcctttcacttctatttatagagttcttgggct 2689951  T
Q  248 cttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||| |||||||| ||||||||||||||||||| |||||||||||||    
T  2689952 cttgtagccgttagagggtgaccaatggtgttatgccatgtgtcct 2689997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 87 - 293
Target Start/End: Complemental strand, 20852038 - 20851831
Alignment:
Q  87 ataagaaagaattgatttacacttgaaaagactt---ggaatctttgtgatgatcaannnnnnngctaaagcttcacaacaatgctcttgttgtttttct 183  Q
    |||||| |||||||||||||||||  ||||||||   ||||||||||||||||||||       |||||||||||| |||| | ||  ||||||||||||    
T  20852038 ataagagagaattgatttacacttttaaagacttcttggaatctttgtgatgatcaattttt--gctaaagcttcaaaacact-cttatgttgtttttct 20851942  T
Q  184 tgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtg 282  Q
    ||| |||||||||| ||||||||||||| |||| |||| |  ||||||||||||||||||  |||||| |||||||| |||||||||||||||| || |     
T  20851941 tgtatgctttgcaacggtgcaagtaatgttgaggctttgatctctatttatagagttattgagctcttgtagccgttagagggtgaccaatggtctttta 20851842  T
Q  283 ccatgtgtcct 293  Q
    |||||| ||||    
T  20851841 ccatgtatcct 20851831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 31991243 - 31991359
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  31991243 ttttcttgtatgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 31991342  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  31991343 gttatgccacgtgtcct 31991359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 14881277 - 14881391
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  14881277 ttttcttgtatgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 14881376  T
Q  277 gttgtgccatgtgtc 291  Q
    ||| ||||| |||||    
T  14881377 gttatgccacgtgtc 14881391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 178 - 290
Target Start/End: Complemental strand, 17269282 - 17269169
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  17269282 ttttcttgtatgctttgcaatggtgcaagtaatgttgagcctttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 17269183  T
Q  277 gttgtgccatgtgt 290  Q
    ||| ||||||||||    
T  17269182 gttatgccatgtgt 17269169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 14893627 - 14893743
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  14893627 ttttcttgtatgctttgcaatggtgcaagtaatgttgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 14893726  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  14893727 gttatgccacgtgtcct 14893743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 285
Target Start/End: Original strand, 33773720 - 33773828
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| |  ||||||||||||||  |||||||| ||||||||||| | ||| |||||||||    
T  33773720 ttttcttgtatgctttgcaatggtgcaagtaatgttgagcctttgatctctatttatagagtcttttggctcatatagccgttgtaaggtaaccaatggt 33773819  T
Q  277 gttgtgcca 285  Q
    ||| |||||    
T  33773820 gttatgcca 33773828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 31998832 - 31998948
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||  || ||||  ||||||| ||| | |||||| ||||||    
T  31998832 ttttcttgtatgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtctttgggctgatatagccattgtaaggtgacaaatggt 31998931  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  31998932 gttatgccacgtgtcct 31998948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 13675005 - 13674933
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcctaggt 297  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  13675005 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcctaggt 13674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 9324676 - 9324744
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  9324676 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 9324744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 21202476 - 21202544
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  21202476 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 21202544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 21212892 - 21212960
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  21212892 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 21212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 21334717 - 21334649
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  21334717 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 21334649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 21987580 - 21987648
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  21987580 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 21987648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 21997116 - 21997182
Alignment:
Q  227 tatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  21997116 tatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 21997182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 293
Target Start/End: Original strand, 23014645 - 23014751
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccat 286  Q
    ||||||||||||||||||||  |||| || | ||    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||     
T  23014645 tgctttgcaatggtgcaagttttgctaaggccttgttctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccac 23014744  T
Q  287 gtgtcct 293  Q
    |||||||    
T  23014745 gtgtcct 23014751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 23474207 - 23474146
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagt 238  Q
    ||||||||| || ||||||||||||||||||||| ||||||||| |  ||||||||||||||    
T  23474207 ttttcttgtatgttttgcaatggtgcaagtaatgttgagcctttgatctctatttatagagt 23474146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 20530911 - 20531027
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| || | || |  |||||||||| |||  || ||||| |||| |||||| | |||| ||||||||    
T  20530911 ttttcttgtgtgctttgcaatggtgcaagttttgctaaggccttgatctctatttataaagtctttgggctcatataaccgttgtaaggtgcccaatggt 20531010  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  20531011 gttatgccacgtgtcct 20531027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 11430307 - 11430378
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcctagg 296  Q
    ||||||||||||||  || ||||| ||||||||||| | |||| ||||||||||| | ||| ||||||||||    
T  11430307 tctatttatagagtctttgggctcatatagccgttgtaaggtgcccaatggtgttattccacgtgtcctagg 11430378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 148 - 293
Target Start/End: Original strand, 15988224 - 15988369
Alignment:
Q  148 gctaaagcttcacaacaatgctcttgttgtttttcttgttgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggct 247  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||| |  | ||||||||||||| || ||||    
T  15988224 gctaaagcttcacaacaatgttcttgttgtttttcttgttgctttgcaatggtgcaagtaatgctaagactttgatctttatttatagagtttttgggct 15988323  T
Q  248 cttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    | ||||||||||| |||||| |||||||| ||||| ||||||||||    
T  15988324 catatagccgttgtagggtgtccaatggtcttgtgacatgtgtcct 15988369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 291
Target Start/End: Original strand, 14247981 - 14248222
Alignment:
Q  57 agaatggaaggagaacttatccttaacaagataagaaagaattgatttacacttgaaaagac---ttggaatctttgtgatgatcaannnnnnngctaaa 153  Q
    |||||||| |||||| ||||| ||||||| |||||| ||||||||||||||||| || ||||   ||| |||||  |||||||||||       ||||||    
T  14247981 agaatggagggagaaattatctttaacaaaataagagagaattgatttacactttaagagacaatttgaaatctcagtgatgatcaatttaaatgctaaa 14248080  T
Q  154 gcttcacaacaatgctcttgttgtttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcac-----ttctatttatagagttatttggct 247  Q
    |||||| |||| |  ||  | |||||||||||| |||||||||||||||||||||||| ||||||||||||     || ||||||||||||| || ||||    
T  14248081 gcttca-aacacttttca-gatgtttttcttgtatgctttgcaatggtgcaagtaatgttgagcctttcacttatattatatttatagagttcttgggct 14248178  T
Q  248 cttatagccgttggagggtgaccaatggtgttgtgccatgtgtc 291  Q
    ||| ||||||||| ||||||||||||||| |||| |||||||||    
T  14248179 cttgtagccgttgaagggtgaccaatggtcttgttccatgtgtc 14248222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 2991499 - 2991601
Alignment:
Q  189 ctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgt 288  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||| |||| || ||||||| ||||||||||||||||||||||||||||||| |||||    
T  2991499 ctttgcaatgatgcaagtaatgctgaaccttttacttctatttataaagttcttgggctcttgtagccgttggagggtgaccaatggtgttgtgtcatgt 2991598  T
Q  289 gtc 291  Q
    |||    
T  2991599 gtc 2991601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 45553672 - 45553556
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  45553672 ttttcttgtatgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 45553573  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  45553572 gttatgccacgtgtcct 45553556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 19586214 - 19586098
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  19586214 ttttcttgtatgctttgcaatggtgcaagtaatgttgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 19586115  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  19586114 gttatgccacgtgtcct 19586098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 24540412 - 24540526
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||  || ||||| ||||||||||| | ||||| |||||||    
T  24540412 ttttcttgtatgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgatcaatggt 24540511  T
Q  277 gttgtgccatgtgtc 291  Q
    ||| ||||| |||||    
T  24540512 gttatgccacgtgtc 24540526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 293
Target Start/End: Complemental strand, 12770641 - 12770431
Alignment:
Q  84 aagataagaaagaattgatttacacttgaaaagactt---ggaatctttgtgatgatcaannnnnnngctaaagcttcacaacaatgctcttgttgtttt 180  Q
    ||||||||| |||| ||||||||||||  ||||||||   ||||||||||||| ||||||       |||||||||||| |||| | ||  ||||| |||    
T  12770641 aagataagagagaactgatttacacttttaaagacttcttggaatctttgtgacgatcaattttt--gctaaagcttcaaaacact-cttatgttgcttt 12770545  T
Q  181 tcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgtt 279  Q
    |||||| |||||||||| |||||||||||||||||| | || |  ||||||||||||||| ||  |||||| |||  |||||||||||||||||||| ||    
T  12770544 tcttgtatgctttgcaaaggtgcaagtaatgctgaggccttgatctctatttatagagttcttgagctcttgtagttgttggagggtgaccaatggtctt 12770445  T
Q  280 gtgccatgtgtcct 293  Q
     ||||| |||||||    
T  12770444 ttgccacgtgtcct 12770431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 12491799 - 12491686
Alignment:
Q  179 tttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtg 277  Q
    |||||||| |||||||||||||||||||||||| ||||||||  |  ||||||||||||||  || ||||| ||||||||||| ||| || |||||||||    
T  12491799 tttcttgtatgctttgcaatggtgcaagtaatgatgagccttagatctctatttatagagtctttgggctcatatagccgttgtaggatgtccaatggtg 12491700  T
Q  278 ttgtgccatgtgtc 291  Q
    || ||||| |||||    
T  12491699 ttatgccacgtgtc 12491686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 27989308 - 27989192
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  ||||  | | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  27989308 ttttcttgtatgctttgcaatggtgcaagttttgctacgaccttgatatctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 27989209  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  27989208 gttatgccatgtgtcct 27989192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 12515593 - 12515491
Alignment:
Q  189 ctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgt 288  Q
    ||||||||||||| |||||||| ||||||||  |  ||||||||||||||  || ||||| |||| |||||| |||||| ||||||||||| ||||| ||    
T  12515593 ctttgcaatggtgtaagtaatgatgagccttagaactctatttatagagtctttgggctcatatatccgttgtagggtgtccaatggtgttatgccacgt 12515494  T
Q  289 gtc 291  Q
    |||    
T  12515493 gtc 12515491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 5381458 - 5381526
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  5381458 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 5381526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 5391096 - 5391164
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  5391096 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 5391164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 5927554 - 5927486
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  5927554 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 5927486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 6534903 - 6534835
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  6534903 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 6534835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 6545224 - 6545156
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  6545224 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 6545156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 11626007 - 11626075
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  11626007 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 11626075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 16131557 - 16131625
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  16131557 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttctgccatgtgtcct 16131625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 16142106 - 16142174
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  16142106 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttctgccatgtgtcct 16142174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 26307534 - 26307466
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  26307534 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 26307466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 26362844 - 26362912
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  26362844 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 26362912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 43983896 - 43983828
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  43983896 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 43983828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 44908139 - 44908071
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  44908139 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 44908071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 46497533 - 46497465
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  46497533 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 46497465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 46508145 - 46508077
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  46508145 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 46508077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 44897712 - 44897646
Alignment:
Q  227 tatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  44897712 tatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 44897646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 8501468 - 8501400
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||  ||||||||||| |||||| ||||||||||| |||||||||||||    
T  8501468 tctatttatagagtctttgggcttatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 8501400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 8511938 - 8511870
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||  ||||||||||| |||||| ||||||||||| |||||||||||||    
T  8511938 tctatttatagagtctttgggcttatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 8511870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 9534835 - 9534951
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||| ||||| ||| || ||||||||    
T  9534835 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagtcgttgtaggatgtccaatggt 9534934  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  9534935 gttatgccatgtgtcct 9534951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 9545118 - 9545234
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||| ||||| ||| || ||||||||    
T  9545118 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagtcgttgtaggatgtccaatggt 9545217  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  9545218 gttatgccatgtgtcct 9545234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 15372267 - 15372199
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||| ||| |||||| ||||||||||| |||||||||||||    
T  15372267 tctatttatagagtctttgggctcatatagccattgtagggtgtccaatggtgttatgccatgtgtcct 15372199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 32098799 - 32098731
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| |||||| |||| |||||||||||||    
T  32098799 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatgatgttatgccatgtgtcct 32098731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 32109236 - 32109168
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| |||||| |||| |||||||||||||    
T  32109236 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatgatgttatgccatgtgtcct 32109168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 15988164 - 15988224
Alignment:
Q  73 ttatccttaacaagataagaaagaattgatttacacttgaaaaga---cttggaatctttg 130  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||   |||||||||||||    
T  15988164 ttatctttaaaaagataagagagaattgatttacacttgaaaagacttcttggaatctttg 15988224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 9007526 - 9007443
Alignment:
Q  60 atggaaggagaacttatccttaacaagataagaaagaattgatttacacttgaaaaga---cttggaatctttgtgatgatcaa 140  Q
    |||||||||||| ||| | |||| ||||||| | |||||| ||||||||||  |||||   |||||||||||||||||||||||    
T  9007526 atggaaggagaagttaactttaagaagataacagagaatttatttacacttttaaagacttcttggaatctttgtgatgatcaa 9007443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 14944674 - 14944606
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || || || ||||||| ||| |||||| ||||||||||| |||||||||||||    
T  14944674 tctatttatagagtctttgggatcatatagccattgtagggtgtccaatggtgttatgccatgtgtcct 14944606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14248019 - 14248069
Alignment:
Q  1 gaattgatttacactacaagagaca-tttgagatctcagtgatgatcaatt 50  Q
    |||||||||||||||  |||||||| ||||| |||||||||||||||||||    
T  14248019 gaattgatttacactttaagagacaatttgaaatctcagtgatgatcaatt 14248069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 2991405 - 2991458
Alignment:
Q  2 aattgatttacactacaagagaca-tttgagatctcagtgatgatcaattcaga 54  Q
    |||||||||||| |  |||||||| ||||| |||||||||||||||||||||||    
T  2991405 aattgatttacatttaaagagacaatttgaaatctcagtgatgatcaattcaga 2991458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 7019058 - 7019126
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    |||||||||||| |  || ||||| ||||||||||| |||||| ||||| ||||  |||||||||||||    
T  7019058 tctatttatagattctttgggctcatatagccgttgtagggtgtccaattgtgtaatgccatgtgtcct 7019126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 7034420 - 7034488
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    |||||||||||| |  || ||||| ||||||||||| |||||| ||||| ||||  |||||||||||||    
T  7034420 tctatttatagattctttgggctcatatagccgttgtagggtgtccaattgtgtaatgccatgtgtcct 7034488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 15910 - 15797
Alignment:
Q  180 ttcttgttgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgtt 279  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||||| || ||||| |||||||| ||||||| ||    
T  15910 ttcttgttgctttgcaatggtgcgagtaatgctgagtctttcacttctatttatagagttcttcggctcttgtaaccgttagagggtgaacaatggtctt 15811  T
Q  280 gtgccatgtgtcct 293  Q
    ||||||||| ||||    
T  15810 gtgccatgtttcct 15797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 6e-34; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 180 - 293
Target Start/End: Original strand, 23376555 - 23376668
Alignment:
Q  180 ttcttgttgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgtt 279  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||||| || ||||| |||||||| ||||||| ||    
T  23376555 ttcttgttgctttgcaatggtgcgagtaatgctgagtctttcacttctatttatagagttcttcggctcttgtaaccgttagagggtgaacaatggtctt 23376654  T
Q  280 gtgccatgtgtcct 293  Q
    ||||||||| ||||    
T  23376655 gtgccatgtttcct 23376668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 13571466 - 13571582
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  13571466 ttttcttgtatgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 13571565  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  13571566 gttatgccacgtgtcct 13571582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 27273967 - 27274083
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  27273967 ttttcttgtatgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 27274066  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  27274067 gttatgccacgtgtcct 27274083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 31917282 - 31917166
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  31917282 ttttcttgtatgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 31917183  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  31917182 gttatgccacgtgtcct 31917166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 37298600 - 37298716
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||| ||||||||||||||||| |  ||||||||||||||| || ||||| ||||||||||| | |||||||||||||    
T  37298600 ttttcttgtatgctttgcaatggtgctagtaatgctgagcctttgatctctatttatagagtttttgggctcatatagccgttgtaaggtgaccaatggt 37298699  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  37298700 gttatgccacgtgtcct 37298716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 37818068 - 37817952
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  37818068 ttttcttgtatgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 37817969  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  37817968 gttatgccacgtgtcct 37817952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 22173038 - 22173152
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  22173038 ttttcttgtatgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 22173137  T
Q  277 gttgtgccatgtgtc 291  Q
    ||| ||||| |||||    
T  22173138 gttatgccacgtgtc 22173152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 4037765 - 4037881
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  4037765 ttttcttgtatgctttgcaattgtgcaagtaattctgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 4037864  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  4037865 gttatgccacgtgtcct 4037881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 20764824 - 20764708
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| |  ||||||||||||||| || ||||| ||||| | ||| | ||||| |||||||    
T  20764824 ttttcttgtatgctttgcaatggtgcaagtaatgatgagcctttgatctctatttatagagtttttgggctcatatagtcattgtaaggtgatcaatggt 20764725  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  20764724 gttatgccacgtgtcct 20764708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 32070907 - 32070791
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  32070907 ttttcttgtatgctttgcaatggtgcaagttttgctaaggccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 32070808  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  32070807 gttatgccatgtgtcct 32070791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 289
Target Start/End: Original strand, 42090304 - 42090416
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| |  ||||||||||||||| || ||||| |||||  |||| | |||||||||| ||    
T  42090304 ttttcttgtatgctttgcaatggtgcaagtaatgttgagcctttgatctctatttatagagtttttgggctcatatagttgttgtaaggtgaccaattgt 42090403  T
Q  277 gttgtgccatgtg 289  Q
    ||| || ||||||    
T  42090404 gttatgacatgtg 42090416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 27580093 - 27580161
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    |||||||||||||| ||| ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  27580093 tctatttatagagtcattgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 27580161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 293
Target Start/End: Original strand, 34130287 - 34130391
Alignment:
Q  189 ctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgt 288  Q
    |||||||||| ||||||||||| ||||||||| |  ||||||||||||||  || ||||| ||||| ||||| | ||||| |||||||||| ||||| ||    
T  34130287 ctttgcaatgatgcaagtaatgttgagcctttgatctctatttatagagtctttgggctcatatagtcgttgtaaggtgatcaatggtgttatgccacgt 34130386  T
Q  289 gtcct 293  Q
    |||||    
T  34130387 gtcct 34130391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 8765007 - 8765075
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  8765007 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 8765075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 11410751 - 11410819
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  11410751 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 11410819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 18209291 - 18209359
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  18209291 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 18209359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 18218629 - 18218697
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  18218629 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 18218697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 18361696 - 18361628
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  18361696 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 18361628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 18390653 - 18390585
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  18390653 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 18390585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 21682417 - 21682349
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  21682417 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 21682349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 21753862 - 21753794
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  21753862 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 21753794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 21763149 - 21763081
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  21763149 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 21763081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 26191665 - 26191733
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  26191665 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 26191733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 26202247 - 26202315
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  26202247 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 26202315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 27412615 - 27412499
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| || ||||||||    
T  27412615 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgtccaatggt 27412516  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  27412515 gttatgccatgtgtcct 27412499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 30943253 - 30943369
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| || ||||||||    
T  30943253 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgtccaatggt 30943352  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  30943353 gttatgccatgtgtcct 30943369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 30952675 - 30952791
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| || ||||||||    
T  30952675 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgtccaatggt 30952774  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  30952775 gttatgccatgtgtcct 30952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 33939736 - 33939668
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  33939736 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 33939668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 33950136 - 33950068
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  33950136 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 33950068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 297
Target Start/End: Original strand, 37538362 - 37538482
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| ||  |||||||    
T  37538362 ttttcttgtatgctttgcaatggtgcaagttttgctaattccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgttcaatggt 37538461  T
Q  277 gttgtgccatgtgtcctaggt 297  Q
    ||| |||||||||||||||||    
T  37538462 gttatgccatgtgtcctaggt 37538482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 293
Target Start/End: Original strand, 205275 - 205381
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccat 286  Q
    ||||||||||||||||||||  |||| || | || |  ||||||||||||||| || ||||| |||| |||||| | |||| ||||||||||| |||||     
T  205275 tgctttgcaatggtgcaagttttgctaaggccttgatctctatttatagagtttttgggctcatataaccgttgtaaggtgcccaatggtgttatgccac 205374  T
Q  287 gtgtcct 293  Q
    |||||||    
T  205375 gtgtcct 205381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 19887825 - 19887941
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || | ||| ||||||||||| ||| || ||||||||    
T  19887825 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttggactcatatagccgttgtaggatgtccaatggt 19887924  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  19887925 gttatgccatgtgtcct 19887941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 297
Target Start/End: Original strand, 37647473 - 37647593
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| |||| |||||| ||| || ||||||||    
T  37647473 ttttcttgtatgctttgcaatggtgcaagttttgctaattccttgatctctatttatagagtctttgggctcatataaccgttgtaggatgtccaatggt 37647572  T
Q  277 gttgtgccatgtgtcctaggt 297  Q
    ||| |||||||||| ||||||    
T  37647573 gttatgccatgtgttctaggt 37647593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 19781044 - 19780938
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccat 286  Q
    ||||||||||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| | ||||  |||||||||| || |||    
T  19781044 tgctttgcaatggtgcaagttttgctaaggccttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgctcaatggtgttatgtcat 19780945  T
Q  287 gtgtcct 293  Q
    |||||||    
T  19780944 gtgtcct 19780938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 296
Target Start/End: Original strand, 28255 - 28502
Alignment:
Q  52 agagaagaatggaaggagaacttatccttaacaagataagaaagaattgatttacacttgaaaagac---ttggaatctttgtgatgatcaannnnnnng 148  Q
    |||||| |||||| ||| |||||||||||||||||||||||  |||||||||||||||  || ||||   ||| |||||  |||||||| ||       |    
T  28255 agagaataatggagggacaacttatccttaacaagataagatggaattgatttacactacaagagacaatttgaaatctcggtgatgatgaattcagatg 28354  T
Q  149 ctaaagcttcacaacaatgctcttgttgtttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggct 247  Q
    ||||||||||| |||||| ||   |||||||||||| | ||||||||||||||||| |||||| ||||||||| |  |||||||||| |||| ||  |||    
T  28355 ctaaagcttcaaaacaat-ctaaggttgtttttcttatatgctttgcaatggtgcaggtaatgttgagcctttgatatctatttatacagtttttgagct 28453  T
Q  248 cttatagccgttggagggtgaccaatggtgttgtgccatgtgtcctagg 296  Q
    | ||||||| ||||||||||||||||| || | ||||| ||||||||||    
T  28454 catatagccattggagggtgaccaatgatgatatgccacgtgtcctagg 28502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28298 - 28352
Alignment:
Q  1 gaattgatttacactacaagagac-atttgagatctcagtgatgatcaattcaga 54  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||| ||||||||    
T  28298 gaattgatttacactacaagagacaatttgaaatctcggtgatgatgaattcaga 28352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 111366 - 111482
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  111366 ttttcttgtatgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 111465  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  111466 gttatgccacgtgtcct 111482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 45191307 - 45191191
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  45191307 ttttcttgtatgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 45191208  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  45191207 gttatgccacgtgtcct 45191191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 21109727 - 21109608
Alignment:
Q  173 gttgtttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgacca 271  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||| |  |||||||||| |||| || ||||| |||||||||||||||||| |||    
T  21109727 gttgttttccttgtatgctttgcaatggtgcaagtaatgttgagcctttgatctctatttataaagtttttgggctcatatagccgttggagggtggcca 21109628  T
Q  272 atggtgttgtgccatgtgtc 291  Q
    |||||||| || ||||||||    
T  21109627 atggtgttatgtcatgtgtc 21109608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 37862649 - 37862747
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgcca 285  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||||||||| || ||||| ||||||||||| | ||||||||||| |||| |||||    
T  37862649 tgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtttttgggctcatatagccgttgtaaggtgaccaatgatgttatgcca 37862747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 69698 - 69812
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| || ||||||||||||||||||||| ||| ||||| |  ||||||||||||||| || ||||| ||||||||||| | |||||||||||||    
T  69698 ttttcttgtatgatttgcaatggtgcaagtaatgttgatcctttgatctctatttatagagtttttgggctcatatagccgttgtaaggtgaccaatggt 69797  T
Q  277 gttgtgccatgtgtc 291  Q
    ||| ||||| |||||    
T  69798 gttatgccacgtgtc 69812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 16902089 - 16902205
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  16902089 ttttcttgtatgctttgcaatggtgcaagttttgctaaggccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 16902188  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  16902189 gttatgccatgtgtcct 16902205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 16995480 - 16995596
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  16995480 ttttcttgtatgctttgcaatggtgcaagttttgctaaggccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 16995579  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  16995580 gttatgccatgtgtcct 16995596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 12571054 - 12570939
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||| ||||||||||| |||||||||  || |||||||||||||| || || || |||||||| |  | |||||||||||||    
T  12571054 ttttcttgtatgctttgcaatgatgcaagtaatgttgagcctttgtct-ctatttatagagtttttgggttcatatagccgctataaggtgaccaatggt 12570956  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  12570955 gttatgccacgtgtcct 12570939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 285
Target Start/End: Original strand, 22687261 - 22687369
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||| |||| ||||||||||||||| ||| |||| |  ||||||||||||||| || ||||| ||||||||||| | ||||||| |||||    
T  22687261 ttttcttgtatgctatgcagtggtgcaagtaatgccgagtctttgatctctatttatagagtttttgggctcatatagccgttgtaaggtgaccgatggt 22687360  T
Q  277 gttgtgcca 285  Q
    ||| |||||    
T  22687361 gttatgcca 22687369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 44638533 - 44638647
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| || |||||||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  44638533 ttttcttgtatgttttgcaatggtgcaagttttgctaagaccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 44638632  T
Q  277 gttgtgccatgtgtc 291  Q
    ||| |||||||||||    
T  44638633 gttatgccatgtgtc 44638647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 2998257 - 2998325
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  2998257 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 2998325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 4458614 - 4458546
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  4458614 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 4458546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 4468239 - 4468171
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  4468239 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 4468171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 5336695 - 5336763
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  5336695 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 5336763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 5346548 - 5346616
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  5346548 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 5346616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 9502320 - 9502388
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  9502320 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 9502388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 9513686 - 9513754
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  9513686 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 9513754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 17489109 - 17489041
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  17489109 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 17489041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 18651637 - 18651569
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  18651637 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 18651569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 18663755 - 18663687
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  18663755 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 18663687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 24696097 - 24696213
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||| ||| |||||| ||||||||    
T  24696097 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccattgtagggtgtccaatggt 24696196  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  24696197 gttatgccatgtgtcct 24696213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 45015177 - 45015061
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| || ||||||||    
T  45015177 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgtccaatggt 45015078  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  45015077 gttatgccatgtgtcct 45015061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 38957362 - 38957476
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||| ||||| |||||| | ||||||    
T  38957362 ttttcttgtatgctttgcaatggtgcaagttttgctaaggccttgatctctatttatagagtctttgggctcatatagtcgttgtagggtgtcaaatggt 38957461  T
Q  277 gttgtgccatgtgtc 291  Q
    ||| |||||||||||    
T  38957462 gttatgccatgtgtc 38957476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 574687 - 574619
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| | |||||||||||||||| ||||| |||||||    
T  574687 tctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggtgttatgccacgtgtcct 574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 45025276 - 45025160
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||  ||||||||||| ||| || ||||||||    
T  45025276 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggcttatatagccgttgtaggatgtccaatggt 45025177  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  45025176 gttatgccatgtgtcct 45025160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 3605514 - 3605630
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| || |||||||||||||||||  |||| || |||| |  ||||||||||||||  ||  |||| ||||||||||| | |||| | ||||||    
T  3605514 ttttcttgtatgttttgcaatggtgcaagttttgctaaggctttgatctctatttatagagtctttgagctcatatagccgttgtaaggtgcctaatggt 3605613  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  3605614 gttatgccacgtgtcct 3605630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 296
Target Start/End: Original strand, 15475075 - 15475195
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagt-tatttggctcttatagccgttggagggtgaccaatgg 275  Q
    ||||||||| |||||||||| ||||   |||||| |||||||| |||||||||||||||||| | ||   ||||| |||| | ||||| ||||| ||| |    
T  15475075 ttttcttgtatgctttgcaaaggtgtgtgtaatgttgagccttccacttctatttatagagtgtcttgacctcttgtagcagctggagtgtgactaatag 15475174  T
Q  276 tgttgtgccatgtgtcctagg 296  Q
    | |||||||| ||||||||||    
T  15475175 tcttgtgccacgtgtcctagg 15475195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 38930063 - 38930131
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||| | ||||||||||| |||||| ||||||||||| |||||||| ||||    
T  38930063 tctatttatagagtctttgggcccatatagccgttgtagggtgtccaatggtgttatgccatgtttcct 38930131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 24234196 - 24234259
Alignment:
Q  197 tggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttg 260  Q
    |||||||||||||| ||||||||| |  ||||||||||||||| ||  |||| |||||||||||    
T  24234196 tggtgcaagtaatggtgagcctttgatctctatttatagagtttttgagctcatatagccgttg 24234259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 26193039 - 26193155
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  26193039 ttttcttgtatgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 26193138  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  26193139 gttatgccacgtgtcct 26193155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 291
Target Start/End: Original strand, 18058683 - 18058787
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccat 286  Q
    |||||||||||||||||||||||| |||| |||| |  ||||||||||||||| || ||||| ||||||||||| |||||| ||||||||||| ||||||    
T  18058683 tgctttgcaatggtgcaagtaatgttgagtctttgatctctatttatagagtttttgggctcatatagccgttgtagggtgtccaatggtgttatgccat 18058782  T
Q  287 gtgtc 291  Q
    |||||    
T  18058783 gtgtc 18058787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 20314901 - 20314785
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| |  ||||||||||||||  || ||||| ||||||||||| | | |||||||||||    
T  20314901 ttttcttgtatgctttgcaatggtgcaagtaatgttgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaagatgaccaatggt 20314802  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  20314801 gttatgccacgtgtcct 20314785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 27066550 - 27066434
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| |  ||||||||||||||  || ||||| ||||||||||| | | |||||||||||    
T  27066550 ttttcttgtatgctttgcaatggtgcaagtaatgttgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaagatgaccaatggt 27066451  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  27066450 gttatgccacgtgtcct 27066434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 20317633 - 20317749
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||||||||| |||||| |  |||||||||| |||  || | ||| ||||||||||| | |||||||||||||    
T  20317633 ttttcttgtatgctttgcaatggtgcaagtaatgctgcgcctttgatctctatttatatagtctttggactcatatagccgttgtaaggtgaccaatggt 20317732  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  20317733 gttatgccacgtgtcct 20317749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 20328115 - 20328231
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||||||||| |||||| |  |||||||||| |||  || | ||| ||||||||||| | |||||||||||||    
T  20328115 ttttcttgtatgctttgcaatggtgcaagtaatgctgcgcctttgatctctatttatatagtctttggactcatatagccgttgtaaggtgaccaatggt 20328214  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  20328215 gttatgccacgtgtcct 20328231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 18383824 - 18383708
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||| ||||||||||||||||||| | |  | ||||||||||||  || |||||  |||||||||| |||||| |||||| |    
T  18383824 ttttcttgtatgctttgcaatgatgcaagtaatgctgagcctgtgatctttatttatagagtctttgggctcaaatagccgttgtagggtgtccaatgat 18383725  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  18383724 gttatgccatgtgtcct 18383708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 187 - 279
Target Start/End: Original strand, 25039014 - 25039106
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgtt 279  Q
    |||||||||||||||||||||||| ||||||||  |  ||||||||||||||  || ||||| ||||||||||| |||||| |||||||||||    
T  25039014 tgctttgcaatggtgcaagtaatgttgagccttagatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgtt 25039106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 187 - 279
Target Start/End: Original strand, 25044226 - 25044318
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgtt 279  Q
    |||||||||||||||||||||||| ||||||||  |  ||||||||||||||  || ||||| ||||||||||| |||||| |||||||||||    
T  25044226 tgctttgcaatggtgcaagtaatgttgagccttagatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgtt 25044318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 2117320 - 2117206
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| || |||||||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  2117320 ttttcttgtatgttttgcaatggtgcaagttttgctaaggccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 2117221  T
Q  277 gttgtgccatgtgtc 291  Q
    ||| |||||||||||    
T  2117220 gttatgccatgtgtc 2117206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 2370021 - 2370135
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||| ||||| ||||| ||| ||||| |  ||||||||||||||| || ||||| ||||||||||| | |||| | ||| ||    
T  2370021 ttttcttgtatgctttgcaatgttgcaattaatgttgatcctttgatctctatttatagagtttttgggctcatatagccgttgtaaggtgtctaattgt 2370120  T
Q  277 gttgtgccatgtgtc 291  Q
    ||| |||||||||||    
T  2370121 gttatgccatgtgtc 2370135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 18096525 - 18096627
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||| ||||||||  |  ||||||||||||||  || ||||| ||||||| ||| ||| || ||||||||    
T  18096525 ttttcttgtatgctttgcaatggtgcaagtaatgttgagccttagatctctatttatagagtctttgggctcatatagccattgtaggatgtccaatggt 18096624  T
Q  277 gtt 279  Q
    |||    
T  18096625 gtt 18096627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 290
Target Start/End: Complemental strand, 13965328 - 13965215
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||| |||||||  ||||||  | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  13965328 ttttcttgtatgctttgcaatgatgcaagttttgctgaagccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 13965229  T
Q  277 gttgtgccatgtgt 290  Q
    ||| ||||||||||    
T  13965228 gttatgccatgtgt 13965215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18058500 - 18058604
Alignment:
Q  1 gaattgatttacactacaagagacatttgagatctc-agtgatgatcaattcagagaagaatggaaggagaacttatccttaacaagataagaaagaatt 99  Q
    |||||||||||||||||||||||||||  | || || |||||||||||||||   |||  ||||| ||| |||||| | |||||||||||||||||||||    
T  18058500 gaattgatttacactacaagagacattaaaaatgtccagtgatgatcaattc---gaa--atggaggga-aacttagctttaacaagataagaaagaatt 18058593  T
Q  100 gatttacactt 110  Q
    |||||||||||    
T  18058594 gatttacactt 18058604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 16155350 - 16155234
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| || ||||||||    
T  16155350 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgtccaatggt 16155251  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  16155250 gttatgccatgtgtcct 16155234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 21459047 - 21458979
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  21459047 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 21458979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 18058472 - 18058514
Alignment:
Q  67 gagaacttatccttaacaagataagaaagaattgatttacact 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  18058472 gagaacttatctttaacaagataagaaagaattgatttacact 18058514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 34823419 - 34823303
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttg-gctcttatagccgttggagggtgaccaatgg 275  Q
    ||||||||| |||||||||| |||| | |||||| ||||| || |||| ||||||||||||||  |||  |||||||||| ||||||| ||||||||||     
T  34823419 ttttcttgtatgctttgcaa-ggtgtatgtaatgatgagcattccactcctatttatagagtttcttgacctcttatagctgttggagagtgaccaatga 34823321  T
Q  276 tgttgtgccatgtgtcct 293  Q
    | ||||||||| ||||||    
T  34823320 ttttgtgccatatgtcct 34823303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 30549269 - 30549341
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcctaggt 297  Q
    ||||||||||||||  ||  |||| ||||||||||| ||| || ||||||||||| |||||||||||||||||    
T  30549269 tctatttatagagtctttgagctcatatagccgttgtaggatgtccaatggtgttatgccatgtgtcctaggt 30549341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 42034591 - 42034523
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| ||||| |||||||    
T  42034591 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccacgtgtcct 42034523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 25019935 - 25019821
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| || ||||||||    
T  25019935 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgtccaatggt 25019836  T
Q  277 gttgtgccatgtgtc 291  Q
    ||| || ||||||||    
T  25019835 gttatgacatgtgtc 25019821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 22961311 - 22961246
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgt 290  Q
    ||||||||||||||| || ||||| |||||| |||| |||||| ||||||||||| ||||| ||||    
T  22961311 tctatttatagagtttttgggctcatatagcagttgtagggtgtccaatggtgttatgccacgtgt 22961246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 279
Target Start/End: Original strand, 25823053 - 25823145
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgtt 279  Q
    |||||||||||||||||||||||| ||||| ||  |  ||||||||||||||  || | ||| ||||||||||| | ||||| ||||| ||||    
T  25823053 tgctttgcaatggtgcaagtaatgttgagctttagatatctatttatagagtctttggactcatatagccgttgtaaggtgaacaatgatgtt 25823145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 4950947 - 4950893
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgtt 279  Q
    ||||||||||||||| || ||||| ||||||||||| | ||||||||||| ||||    
T  4950947 tctatttatagagtttttgggctcatatagccgttgtaaggtgaccaatgttgtt 4950893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 19748221 - 19748287
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtc 291  Q
    ||||||||||||||  || ||||| ||||| ||||| |||||| ||||||||||| || ||||||||    
T  19748221 tctatttatagagtctttgggctcatatagtcgttgtagggtgtccaatggtgttatgtcatgtgtc 19748287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 284
Target Start/End: Complemental strand, 37012450 - 37012353
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgcc 284  Q
    ||||||||||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||| ||||| | |||| ||||||||||| ||||    
T  37012450 tgctttgcaatggtgcaagttttgctaaggccttgatatctatttatagagtctttgggctcatatagtcgttgtaaggtgcccaatggtgttatgcc 37012353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1705 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1705
Description:

Target: scaffold1705; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 1363 - 1257
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccat 286  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||||||||| || ||||| ||||||||||| | ||||| |||||||||| |||||     
T  1363 tgctttgcaatggtgcaagtaatgctgagcctttgatctctatttatagagtttttgggctcatatagccgttgtaaggtgatcaatggtgttatgccac 1264  T
Q  287 gtgtcct 293  Q
    |||||||    
T  1263 gtgtcct 1257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 7887 - 7781
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccat 286  Q
    |||||||||||||||||||||||||| ||||||| |  ||||||||||||||| || ||||| |||||| |||| | |||||||||||||||| ||||||    
T  7887 tgctttgcaatggtgcaagtaatgctaagcctttgatctctatttatagagtttttgggctcatatagctgttgtaaggtgaccaatggtgttatgccat 7788  T
Q  287 gtgtcct 293  Q
    |||||||    
T  7787 gtgtcct 7781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0591 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0591
Description:

Target: scaffold0591; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 208
Target Start/End: Complemental strand, 1536 - 1378
Alignment:
Q  52 agagaagaatggaaggagaacttatccttaacaagataagaaagaattgatttacacttgaaaagac---ttggaatctttgtgatgatcaannnnnnng 148  Q
    ||||||||||||| |||||| ||||| |||||||||||||| ||||||||||||||||| || ||||   ||  |||||   |||||| |||       |    
T  1536 agagaagaatggagggagaaattatctttaacaagataagagagaattgatttacactt-aagagacaatttaaaatctcgatgatgaacaattcagatg 1438  T
Q  149 ctaaagcttcacaacaatgctcttgttgtttttcttgttgctttgcaatggtgcaagtaa 208  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||    
T  1437 ctaaagcttcacaacaatgatcttgttgtttttcttgatgttttgcaatggtgcaagtaa 1378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 441 - 557
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  441 ttttcttgtatgctttgcaatggtgcaagtaatgttgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 540  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  541 gttatgccacgtgtcct 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 10508277 - 10508393
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||| |  ||||||||||||||| ||  |||| ||||||||||| |||||||||| ||||    
T  10508277 ttttcttgtatgctttgcaatagtgcaagtaatgctaagcctttgatctctatttatagagtttttgagctcatatagccgttgtagggtgaccattggt 10508376  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  10508377 gttatgccatgtgtcct 10508393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 11459702 - 11459536
Alignment:
Q  73 ttatccttaacaagataagaaagaattgatttacacttgaaaagactt---ggaatctttgtgatgatcaannnnnnngctaaagcttcacaacaatgct 169  Q
    ||||| |||| | ||||||| |||||||||||||||||  ||||||||   | ||||||||||||||||||       |||||| |||||||||| |  |    
T  11459702 ttatctttaaaatgataagagagaattgatttacacttttaaagacttctagaaatctttgtgatgatcaatttttt-gctaaatcttcacaacattatt 11459604  T
Q  170 cttgttgtttttcttgttgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagt 238  Q
     | |||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||||||||||||    
T  11459603 at-gttgtttttcttgttgcttttcaatggtgcaagtaatgttaagtcttccacttctatttatagagt 11459536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 19827825 - 19827941
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||  ||||||||||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||| ||||    
T  19827825 ttttcttgtatgctttgcaatggtgtgagtaatgctgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccagtggt 19827924  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  19827925 gttatgccacgtgtcct 19827941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 13119215 - 13119331
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  13119215 ttttcttgtatgctttgcaatggtgcaagttttgctaaggccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 13119314  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  13119315 gttatgccatgtgtcct 13119331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 20492490 - 20492374
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| || |  | |  ||||||||||||||  |||||||| ||||||||||| |||||| ||||||||    
T  20492490 ttttcttgtatgctttgcaatggtgcaagttttgctaagaccatgatctctatttatagagtcttttggctcatatagccgttgtagggtgtccaatggt 20492391  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  20492390 gttatgccatgtgtcct 20492374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 297
Target Start/End: Original strand, 4023732 - 4023852
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||| |||| ||  ||||||| | || |  ||||||||||||||  || ||||| ||||||||||| | |||| ||||||||    
T  4023732 ttttcttgtatgctttgcaatgatgcaggttttgctgaggccttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgtccaatggt 4023831  T
Q  277 gttgtgccatgtgtcctaggt 297  Q
    ||| |||||||||||||||||    
T  4023832 gttatgccatgtgtcctaggt 4023852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 10011808 - 10011924
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  10011808 ttttcttgtatgctttgcaatggtgcaagttttgctaaggccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 10011907  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||  |||||||||||||    
T  10011908 gtaatgccatgtgtcct 10011924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 20744656 - 20744772
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  | || || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  20744656 ttttcttgtatgctttgcaatggtgcaagtttttctaaggccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 20744755  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  20744756 gttatgccatgtgtcct 20744772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 25433302 - 25433186
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||| ||||| |||||| ||||||||    
T  25433302 ttttcttgtatgctttgcaatggtgcaagttttgctaaggccttgatctctatttatagagtctttgggctcatatagacgttgtagggtgtccaatggt 25433203  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  25433202 gttatgccatgtgtcct 25433186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 11635 - 11703
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  11635 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 11703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 1684900 - 1684968
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  1684900 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 1684968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 2488827 - 2488943
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||| ||||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  2488827 ttttcttgtatgctttgcaatggtgtaagttttgctaagaccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 2488926  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| || ||||||||||    
T  2488927 gttatgtcatgtgtcct 2488943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 4371774 - 4371706
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  4371774 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 4371706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 4381515 - 4381447
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  4381515 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 4381447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 4782218 - 4782334
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| || ||||||||    
T  4782218 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgtccaatggt 4782317  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  4782318 gttatgccatgtgtcct 4782334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 5655275 - 5655343
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  5655275 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 5655343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 8973265 - 8973197
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  8973265 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 8973197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 8983820 - 8983752
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  8983820 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 8983752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 9537554 - 9537486
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  9537554 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 9537486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 9547880 - 9547812
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  9547880 tctatttatagagtccttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 9547812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 16335014 - 16335130
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| || ||||||||    
T  16335014 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgtccaatggt 16335113  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  16335114 gttatgccatgtgtcct 16335130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 6433195 - 6433079
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||  || ||||||||    
T  6433195 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtagaatgtccaatggt 6433096  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  6433095 gttatgccatgtgtcct 6433079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 6422768 - 6422652
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| || || |||||    
T  6422768 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgtcccatggt 6422669  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| || ||||||||||    
T  6422668 gttatgtcatgtgtcct 6422652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 51978436 - 51978504
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||| ||||| |||||| |||||||| || ||||| |||||||    
T  51978436 tctatttatagagtctttgggctcatatagtcgttgtagggtgtccaatggtattatgccacgtgtcct 51978504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 217115 - 217001
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| |  | ||||||||||||| || ||||| ||||||||||| | |||||||||||||    
T  217115 ttttcttgtatgctttgcaatggtgcaagtaatgttgagcctttgatctttatttatagagtttttgggctcatatagccgttgtaaggtgaccaatggt 217016  T
Q  277 gttgtgccatgtgtc 291  Q
    ||| ||||| |||||    
T  217015 gttatgccacgtgtc 217001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 309621 - 309737
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| || ||||||||    
T  309621 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgtccaatggt 309720  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  309721 gttatgccatgtgtcct 309737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 189 - 293
Target Start/End: Complemental strand, 23620 - 23516
Alignment:
Q  189 ctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgt 288  Q
    |||||||||||||||||||||| ||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||||| ||||| ||    
T  23620 ctttgcaatggtgcaagtaatgttgagcctttgatctctatttatagagtctttcggctcatatagccgttgtaaggtgaccaatggtgttatgccacgt 23521  T
Q  289 gtcct 293  Q
    |||||    
T  23520 gtcct 23516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 84 - 296
Target Start/End: Original strand, 6521 - 6733
Alignment:
Q  84 aagataagaaagaattgatttacacttgaaaagactt---ggaatctttgtgatgatcaannnnnnngctaaagcttcacaacaatgctcttgttgtttt 180  Q
    ||||||||| |||||||||||||||||  || |||||   ||||||||||||||||||||       |||||||||||| |||| | ||  |||||||||    
T  6521 aagataagagagaattgatttacacttttaa-gacttcttggaatctttgtgatgatcaattttt--gctaaagcttcaaaacact-cttatgttgtttt 6616  T
Q  181 tcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgtt 279  Q
    |||||  |||||||||||||||||||| ||| ||||   || |  ||||||||||||||| || ||||| ||||||||||| ||||||||||||||| ||    
T  6617 tcttgcatgctttgcaatggtgcaagttatgttgaggtcttgatctctatttatagagtttttgggctcatatagccgttgtagggtgaccaatggtctt 6716  T
Q  280 gtgccatgtgtcctagg 296  Q
     ||| | ||||||||||    
T  6717 ttgcaacgtgtcctagg 6733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 285
Target Start/End: Original strand, 50088 - 50196
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| |  ||||||||||||||  || ||||| ||||||||||| | |||||||||||||    
T  50088 ttttcttgtatgctttgcaatggtgcaagtaatactgagcctttgatctctatttatagagtctttgggctcatatagccgttgtaaggtgaccaatggt 50187  T
Q  277 gttgtgcca 285  Q
    ||| |||||    
T  50188 gttatgcca 50196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 187 - 291
Target Start/End: Original strand, 28894 - 28998
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccat 286  Q
    |||||||||||||||||||||||||| || | || |  ||||||||||||||  || ||||||||||||| ||| | |||||||||||||||| |||||     
T  28894 tgctttgcaatggtgcaagtaatgctaaggccttgatctctatttatagagtctttgggctcttatagccattgtaaggtgaccaatggtgttatgccac 28993  T
Q  287 gtgtc 291  Q
    |||||    
T  28994 gtgtc 28998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 293
Target Start/End: Original strand, 2995 - 3202
Alignment:
Q  87 ataagaaagaattgatttacacttgaaaagactt---ggaatctttgtgatgatcaannnnnnngctaaagcttcacaacaatgctcttgttgtttttct 183  Q
    |||||| |||||||||||||||||  ||||||||   ||||||||||||||||||||       ||||||||| || |||| | ||  ||||||||||||    
T  2995 ataagagagaattgatttacacttttaaagacttcttggaatctttgtgatgatcaattttt--gctaaagctccaaaacact-cttatgttgtttttct 3091  T
Q  184 tgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtg 282  Q
    ||| |||||||||| | | ||||| ||| ||||||||| |  ||||||||||||||| || ||||| ||||||||||| |||||  |||| |||  ||||    
T  3092 tgtatgctttgcaacgctacaagtgatgttgagcctttgatctctatttatagagtttttcggctcatatagccgttgtagggtatccaacggtcgtgtg 3191  T
Q  283 ccatgtgtcct 293  Q
    |||||||||||    
T  3192 ccatgtgtcct 3202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 114132 - 114248
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||| ||||||||||||||||| ||||||||| |  ||||||||||||||| || ||||| ||||||||||| | ||||| |||||||    
T  114132 ttttcttgtatgcttttcaatggtgcaagtaatgatgagcctttgatctctatttatagagtttttgggctcatatagccgttgtaaggtgatcaatggt 114231  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| || || |||||||    
T  114232 gttatgtcacgtgtcct 114248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 147161 - 147045
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| || ||||||||||||||||||||| ||||||||| |  ||||||||||||||| || ||||| ||||||||||  | | |||||||||||    
T  147161 ttttcttgtatgatttgcaatggtgcaagtaatgttgagcctttgatctctatttatagagtttttgggctcatatagccgttataagatgaccaatggt 147062  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  147061 gttatgccacgtgtcct 147045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 233638 - 233706
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  233638 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 233706  T

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Target: scaffold0047 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 74331 - 74447
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  74331 ttttcttgtatgctttgcaatggtgcaagttttgctaaggccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 74430  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||||||||||    
T  74431 gttatgccatgtgtcct 74447  T

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Target: scaffold0234 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 227 - 297
Target Start/End: Original strand, 20809 - 20879
Alignment:
Q  227 tatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcctaggt 297  Q
    |||||||||||| ||| ||||| ||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  20809 tatttatagagtcattgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcctaggt 20879  T

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Target: scaffold0231 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 16226 - 16324
Alignment:
Q  187 tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgcca 285  Q
    ||||||||||||||| ||||||||| |||||||| |  | ||||||||||||| || ||||| ||||| ||||| | |||||||||||||||| |||||    
T  16226 tgctttgcaatggtgtaagtaatgccgagcctttgatctttatttatagagtttttaggctcatatagtcgttgtaaggtgaccaatggtgttatgcca 16324  T

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Target: scaffold0141 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 19226 - 19121
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| |  ||||||  ||||||| || ||||| ||||||||||| | |||||||||||||    
T  19226 ttttcttgtatgctttgcaatggtgcaagtaatgttgagcctttgatctctatt--tagagtt-ttgggctcatatagccgttgtaaggtgaccaatggt 19130  T
Q  277 gttgtgcca 285  Q
    ||| |||||    
T  19129 gttatgcca 19121  T

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Target: scaffold0043 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 92476 - 92591
Alignment:
Q  179 tttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtg 277  Q
    |||||||| ||||||||||||||||||||  |||| || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||     
T  92476 tttcttgtatgctttgcaatggtgcaagttttgctaaggccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtc 92575  T
Q  278 ttgtgccatgtgtcct 293  Q
    || |||||||||||||    
T  92576 ttatgccatgtgtcct 92591  T

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Target: scaffold0611 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 8592 - 8476
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  || | || | || |  ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||    
T  8592 ttttcttgtatgctttgcaatggtgcaagttttgttaaggccttgatctctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggt 8493  T
Q  277 gttgtgccatgtgtcct 293  Q
     || |||||||||||||    
T  8492 cttatgccatgtgtcct 8476  T

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Target: scaffold0254 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 7492 - 7560
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| ||||||||||| |||||||||||||    
T  7492 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtgttatgccatgtgtcct 7560  T

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Target: scaffold0106 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 16995 - 17109
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| || | || |  ||||||||||||||   | ||||| ||||||||||| |||||| ||||||||    
T  16995 ttttcttgtatgctttgcaatggtgcaagttttgctaaggccttgatctctatttatagagtctctgggctcatatagccgttgtagggtgtccaatggt 17094  T
Q  277 gttgtgccatgtgtc 291  Q
    ||| || ||||||||    
T  17095 gttatgtcatgtgtc 17109  T

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Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 197030 - 197096
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtc 291  Q
    |||||||||||| || || ||||| | |||||||| |||||||||||||||| ||||||||||||||    
T  197030 tctatttatagaattcttgggctcctgtagccgttagagggtgaccaatggtcttgtgccatgtgtc 197096  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 293
Target Start/End: Complemental strand, 55137 - 54997
Alignment:
Q  150 taaagcttcacaacaatgctcttgttgtttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctc 248  Q
    |||||||||| |||||| || |||||||||||||||| |||||||||   |||||||| ||| |||| | || |  ||||||||||| |||  | |||||    
T  55137 taaagcttcaaaacaat-ct-ttgttgtttttcttgtatgctttgcagatgtgcaagttatgttgaggccttgatctctatttatagtgtt--tgggctc 55042  T
Q  249 ttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
     ||||||||||| ||||||||||||||| || ||||| |||||||    
T  55041 atatagccgttgtagggtgaccaatggtcttttgccacgtgtcct 54997  T

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Target: scaffold0018; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 293
Target Start/End: Complemental strand, 60580 - 60374
Alignment:
Q  84 aagataagaaagaattgatttacacttgaaaagactt---ggaatctttgtgatgatcaannnnnnngctaaagcttcacaacaatgctcttgttgtttt 180  Q
    ||||||||| |||||||||||||||||  || |||||   | ||||||||||||||||||       |||||||||||| || ||| || ||||||||||    
T  60580 aagataagagagaattgatttacacttttaa-gacttcttgaaatctttgtgatgatcaattttt--gctaaagcttcaaaataat-ct-ttgttgtttt 60486  T
Q  181 tcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgtt 279  Q
    |||||| |||||||||   |||||||| ||| |||| | || |  ||||||||||| |||  | ||||| |||||||| || ||||||||||||||| ||    
T  60485 tcttgtatgctttgcagatgtgcaagttatgttgaggccttgatctctatttatagtgtt--tgggctcatatagccgctgtagggtgaccaatggtctt 60388  T
Q  280 gtgccatgtgtcct 293  Q
     ||||| |||||||    
T  60387 ttgccacgtgtcct 60374  T

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Target: scaffold0018; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 59067 - 58946
Alignment:
Q  171 ttgttgtttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgac 269  Q
    |||||||||||||||| |||||||||   |||||||| ||| |||| | || |  ||||||||||| |||  | ||||| |||||||| || ||||||||    
T  59067 ttgttgtttttcttgtatgctttgcagatgtgcaagttatgttgaggccttgatctctatttatagtgtt--tgggctcatatagccgctgtagggtgac 58970  T
Q  270 caatggtgttgtgccatgtgtcct 293  Q
    ||||||| || ||||| |||||||    
T  58969 caatggtcttttgccacgtgtcct 58946  T

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Target: scaffold0277 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 18966 - 19082
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||||||  |||| |  | || |  ||||||||||||||  || ||||| ||||||||||| ||| || ||||||||    
T  18966 ttttcttgtatgctttgcaatggtgcaagttttgctaatgccttgatctctatttatagagtctttgggctcatatagccgttgtaggatgtccaatggt 19065  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| |||||| ||||||    
T  19066 gttatgccatatgtcct 19082  T

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Target: scaffold0086 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 55490 - 55558
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||  || ||||| ||||||||||| |||||| |||||||| || |||||||||||||    
T  55490 tctatttatagagtctttgggctcatatagccgttgtagggtgtccaatggtattatgccatgtgtcct 55558  T

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Target: scaffold0706 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 1558 - 1674
Alignment:
Q  178 ttttcttgt-tgctttgcaatggtgcaagtaatgctgagcctttcacttctatttatagagttatttggctcttatagccgttggagggtgaccaatggt 276  Q
    ||||||||| ||||||||||||||||| ||  |||| || | || |   |||||||||||||  || ||||| ||||||| ||| | |||||||||||||    
T  1558 ttttcttgtatgctttgcaatggtgcatgttttgctaaggccttgatccctatttatagagtctttaggctcatatagccattgtaaggtgaccaatggt 1657  T
Q  277 gttgtgccatgtgtcct 293  Q
    ||| ||||| |||||||    
T  1658 gttatgccacgtgtcct 1674  T

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Target: scaffold0764 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 430 - 498
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||| ||  ||  ||||||||||||||| ||||||| |||| || ||||| |||||||    
T  430 tctatttatagagttcttgagcctttatagccgttggagagtgaccactggtcttatgccacgtgtcct 498  T

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Target: scaffold0313 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 6179 - 6111
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||| ||  ||  ||||||||||||||| ||||||| |||| || ||||| |||||||    
T  6179 tctatttatagagttcttgagcctttatagccgttggagagtgaccactggtcttatgccacgtgtcct 6111  T

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Target: scaffold0313; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 20336 - 20268
Alignment:
Q  225 tctatttatagagttatttggctcttatagccgttggagggtgaccaatggtgttgtgccatgtgtcct 293  Q
    ||||||||||||||| ||  ||  ||||||||||||||| ||||||| |||| || ||||| |||||||    
T  20336 tctatttatagagttcttgagcctttatagccgttggagagtgaccactggtcttatgccacgtgtcct 20268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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