View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20118_high_37 (Length: 277)
Name: NF20118_high_37
Description: NF20118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20118_high_37 |
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Alignment Details
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 12 - 262
Target Start/End: Original strand, 15142195 - 15142459
Alignment:
| Q |
12 |
aagaaaccaatcaattaattggaaaaagtggatgatttccataaatgtgtctttagaagcatataatttattaattaggagacaacaaaacatagtaact |
111 |
Q |
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| T |
15142195 |
aagaaaccaatcaattaattggaaaaagtggatgatttccataaatgggtctttagaagcatataatttattaattaggagacaacaaaacatagtaact |
15142294 |
T |
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| Q |
112 |
tataatgcatacttttaagcaggcaaagatatttcctctatcacaaaataatttattatactatac--------------tatagaaaataggtgtggga |
197 |
Q |
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| T |
15142295 |
tataatgcatacttttaagcaggcaaagatatttcctctatcacaaaataatttattatactatactatatatatgtatgtatagaaaataggtgtggga |
15142394 |
T |
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| Q |
198 |
gaaaagtatgtaattagatattattttggaatgttttgtggcttattataggttatagttaatgg |
262 |
Q |
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| T |
15142395 |
gaaaagtatgtaattagatattattttggaatgttttgtggcttattataggttatagttaatgg |
15142459 |
T |
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