View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20118_low_13 (Length: 433)

Name: NF20118_low_13
Description: NF20118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20118_low_13
NF20118_low_13
[»] chr7 (50 HSPs)
chr7 (143-425)||(30108565-30108847)
chr7 (143-425)||(45464993-45465275)
chr7 (143-380)||(46994660-46994897)
chr7 (144-380)||(3690151-3690387)
chr7 (143-380)||(33775408-33775645)
chr7 (151-380)||(36762534-36762763)
chr7 (143-380)||(35342425-35342662)
chr7 (145-380)||(46810707-46810941)
chr7 (144-380)||(36756737-36756973)
chr7 (144-380)||(36766261-36766497)
chr7 (151-348)||(33037701-33037899)
chr7 (258-425)||(4321199-4321365)
chr7 (143-380)||(2168688-2168925)
chr7 (143-380)||(8421416-8421653)
chr7 (143-380)||(38614646-38614883)
chr7 (143-348)||(40785434-40785639)
chr7 (151-380)||(47339784-47340013)
chr7 (143-380)||(23955139-23955376)
chr7 (143-306)||(4321038-4321201)
chr7 (189-425)||(48302197-48302434)
chr7 (158-380)||(34784966-34785188)
chr7 (222-418)||(34692571-34692760)
chr7 (143-232)||(8423316-8423405)
chr7 (143-232)||(35344325-35344414)
chr7 (236-380)||(34784132-34784276)
chr7 (143-234)||(46996735-46996826)
chr7 (143-234)||(47341719-47341810)
chr7 (143-234)||(38613514-38613605)
chr7 (143-234)||(46812615-46812706)
chr7 (143-248)||(23953805-23953910)
chr7 (143-232)||(33038832-33038921)
chr7 (143-235)||(45463670-45463762)
chr7 (197-310)||(11685563-11685676)
chr7 (143-234)||(2167479-2167570)
chr7 (143-234)||(27955370-27955461)
chr7 (143-235)||(4322604-4322696)
chr7 (153-248)||(35403603-35403698)
chr7 (143-234)||(38614944-38615035)
chr7 (179-256)||(20479695-20479772)
chr7 (143-196)||(34690995-34691048)
chr7 (307-380)||(43009518-43009591)
chr7 (144-216)||(30109717-30109789)
chr7 (153-248)||(13169667-13169762)
chr7 (153-232)||(27666100-27666179)
chr7 (189-248)||(35402015-35402074)
chr7 (143-234)||(40784346-40784437)
chr7 (221-311)||(6058393-6058483)
chr7 (190-256)||(11682828-11682894)
chr7 (143-232)||(2492327-2492416)
chr7 (192-232)||(29996549-29996589)
[»] chr6 (19 HSPs)
chr6 (143-425)||(17950561-17950843)
chr6 (143-425)||(35174391-35174664)
chr6 (143-349)||(30639611-30639817)
chr6 (151-425)||(34345133-34345407)
chr6 (143-380)||(4646070-4646307)
chr6 (143-380)||(29114630-29114867)
chr6 (151-425)||(4289426-4289700)
chr6 (143-232)||(4641355-4641444)
chr6 (144-380)||(31210284-31210530)
chr6 (143-232)||(2968139-2968228)
chr6 (143-234)||(29077328-29077419)
chr6 (158-234)||(3018465-3018541)
chr6 (143-234)||(29112300-29112391)
chr6 (143-235)||(17952074-17952166)
chr6 (143-235)||(35175895-35175987)
chr6 (143-202)||(3018528-3018587)
chr6 (153-248)||(32518481-32518576)
chr6 (179-256)||(3480633-3480710)
chr6 (179-256)||(32454284-32454361)
[»] chr4 (52 HSPs)
chr4 (143-425)||(39084961-39085243)
chr4 (143-425)||(44992808-44993090)
chr4 (143-425)||(39922816-39923098)
chr4 (143-425)||(43778389-43778671)
chr4 (143-418)||(42879275-42879559)
chr4 (188-425)||(39190628-39190865)
chr4 (143-425)||(5485861-5486143)
chr4 (143-380)||(2828265-2828502)
chr4 (143-380)||(35997621-35997858)
chr4 (151-425)||(32653440-32653714)
chr4 (143-380)||(10371057-10371294)
chr4 (151-380)||(44792942-44793171)
chr4 (192-425)||(15450225-15450458)
chr4 (199-380)||(27626582-27626763)
chr4 (143-378)||(10767806-10768041)
chr4 (143-378)||(47942602-47942837)
chr4 (143-349)||(4520336-4520542)
chr4 (166-348)||(51040758-51040940)
chr4 (189-380)||(34460271-34460462)
chr4 (152-349)||(44556629-44556815)
chr4 (204-380)||(2348817-2348990)
chr4 (143-232)||(47941811-47941900)
chr4 (144-380)||(6999156-6999390)
chr4 (199-315)||(43823489-43823604)
chr4 (143-234)||(10372739-10372830)
chr4 (143-232)||(2350542-2350631)
chr4 (143-368)||(25994978-25995203)
chr4 (143-232)||(44794795-44794884)
chr4 (143-310)||(230436-230603)
chr4 (143-234)||(10762581-10762672)
chr4 (143-234)||(44558526-44558617)
chr4 (274-368)||(13450175-13450269)
chr4 (143-232)||(35996063-35996152)
chr4 (143-235)||(39083639-39083731)
chr4 (143-235)||(5484540-5484632)
chr4 (143-235)||(39921494-39921586)
chr4 (144-235)||(39189383-39189474)
chr4 (143-215)||(4519376-4519448)
chr4 (143-235)||(42880787-42880879)
chr4 (143-235)||(43779899-43779991)
chr4 (153-248)||(43507177-43507272)
chr4 (153-248)||(43508637-43508732)
chr4 (143-234)||(51041963-51042054)
chr4 (179-256)||(833259-833336)
chr4 (179-256)||(5439623-5439700)
chr4 (153-232)||(4173740-4173819)
chr4 (189-256)||(5437857-5437924)
chr4 (143-234)||(27624806-27624897)
chr4 (148-235)||(32652104-32652191)
chr4 (153-248)||(39345574-39345669)
chr4 (153-232)||(43519434-43519513)
chr4 (327-380)||(9590494-9590547)
[»] chr2 (38 HSPs)
chr2 (143-425)||(28247984-28248266)
chr2 (143-425)||(11021533-11021815)
chr2 (143-380)||(42880665-42880902)
chr2 (143-380)||(41708284-41708521)
chr2 (143-380)||(40997-41233)
chr2 (143-380)||(37418623-37418860)
chr2 (143-302)||(33193-33352)
chr2 (143-345)||(42003379-42003581)
chr2 (143-380)||(15373742-15373979)
chr2 (226-410)||(38149841-38150023)
chr2 (147-232)||(39560-39645)
chr2 (235-380)||(11312943-11313088)
chr2 (143-232)||(15372499-15372588)
chr2 (143-232)||(41706539-41706628)
chr2 (143-234)||(29909693-29909784)
chr2 (144-248)||(25619661-25619765)
chr2 (143-234)||(37417273-37417364)
chr2 (143-234)||(42001610-42001701)
chr2 (298-349)||(35453-35504)
chr2 (143-234)||(39430-39521)
chr2 (143-234)||(15432328-15432419)
chr2 (143-310)||(17948851-17949018)
chr2 (143-235)||(28246663-28246755)
chr2 (143-234)||(92380-92470)
chr2 (147-235)||(11023045-11023132)
chr2 (143-310)||(7745196-7745363)
chr2 (153-248)||(16764595-16764690)
chr2 (179-265)||(24205634-24205720)
chr2 (153-248)||(14387359-14387454)
chr2 (153-232)||(16763086-16763165)
chr2 (189-256)||(37022161-37022228)
chr2 (330-368)||(363548-363586)
chr2 (143-216)||(361445-361518)
chr2 (179-232)||(14389139-14389192)
chr2 (179-232)||(24208097-24208150)
chr2 (143-235)||(38148495-38148588)
chr2 (307-380)||(40099117-40099190)
chr2 (307-371)||(17948780-17948844)
[»] chr8 (65 HSPs)
chr8 (143-425)||(40019156-40019438)
chr8 (143-380)||(33748332-33748569)
chr8 (151-380)||(31823330-31823559)
chr8 (188-380)||(1322168-1322360)
chr8 (143-380)||(32824125-32824362)
chr8 (158-344)||(24526911-24527097)
chr8 (143-349)||(31199485-31199691)
chr8 (143-380)||(9876416-9876653)
chr8 (197-348)||(33158710-33158861)
chr8 (143-349)||(33368759-33368965)
chr8 (158-348)||(37524873-37525063)
chr8 (151-348)||(461184-461381)
chr8 (222-425)||(28432300-28432501)
chr8 (162-380)||(8655841-8656057)
chr8 (166-380)||(42894799-42895007)
chr8 (143-349)||(25373507-25373713)
chr8 (152-380)||(25705308-25705536)
chr8 (143-349)||(25707186-25707392)
chr8 (196-349)||(25370579-25370732)
chr8 (39-134)||(44353117-44353212)
chr8 (225-380)||(12515166-12515321)
chr8 (199-349)||(25356405-25356555)
chr8 (143-232)||(31201178-31201267)
chr8 (236-349)||(38881493-38881605)
chr8 (143-234)||(38882830-38882921)
chr8 (143-234)||(42897807-42897898)
chr8 (143-310)||(44620593-44620760)
chr8 (143-248)||(462389-462494)
chr8 (143-248)||(32822361-32822466)
chr8 (149-235)||(28433748-28433834)
chr8 (143-232)||(31821418-31821507)
chr8 (179-234)||(33750417-33750472)
chr8 (143-232)||(8654500-8654588)
chr8 (143-234)||(1320617-1320708)
chr8 (143-234)||(9184383-9184474)
chr8 (143-310)||(9186569-9186736)
chr8 (143-234)||(33160181-33160272)
chr8 (143-232)||(37526058-37526147)
chr8 (143-235)||(40020667-40020759)
chr8 (153-256)||(601680-601783)
chr8 (152-279)||(23811520-23811647)
chr8 (153-232)||(38548831-38548910)
chr8 (153-248)||(42943410-42943505)
chr8 (158-256)||(13106819-13106917)
chr8 (179-253)||(15308240-15308314)
chr8 (179-253)||(15488609-15488683)
chr8 (307-380)||(11031603-11031676)
chr8 (179-256)||(27404246-27404323)
chr8 (144-217)||(38881429-38881502)
chr8 (153-232)||(13282488-13282567)
chr8 (153-232)||(27691164-27691243)
chr8 (189-256)||(29237197-29237264)
chr8 (153-256)||(29239163-29239266)
chr8 (189-248)||(33707252-33707311)
chr8 (189-248)||(33761115-33761174)
chr8 (153-248)||(33762697-33762792)
chr8 (189-248)||(35509260-35509319)
chr8 (326-380)||(9186489-9186543)
chr8 (198-256)||(11031484-11031542)
chr8 (199-248)||(8608294-8608343)
chr8 (179-232)||(8609842-8609895)
chr8 (222-255)||(11719526-11719559)
chr8 (85-134)||(32678972-32679021)
chr8 (166-226)||(10267861-10267921)
chr8 (153-245)||(27692824-27692916)
[»] chr1 (34 HSPs)
chr1 (143-425)||(5784676-5784958)
chr1 (143-425)||(11152545-11152827)
chr1 (143-380)||(31803554-31803791)
chr1 (144-380)||(46636766-46637002)
chr1 (143-349)||(45379085-45379291)
chr1 (143-380)||(33679259-33679496)
chr1 (143-380)||(42136098-42136335)
chr1 (143-380)||(44159148-44159385)
chr1 (144-349)||(6576990-6577195)
chr1 (143-380)||(35478087-35478324)
chr1 (143-380)||(47264124-47264361)
chr1 (151-380)||(27952354-27952583)
chr1 (143-279)||(18180500-18180636)
chr1 (143-234)||(33685281-33685372)
chr1 (143-234)||(42134482-42134573)
chr1 (143-232)||(27940608-27940697)
chr1 (143-248)||(47269475-47269580)
chr1 (294-349)||(18180630-18180685)
chr1 (143-234)||(18183976-18184067)
chr1 (269-380)||(25172889-25173000)
chr1 (143-234)||(35480008-35480099)
chr1 (143-234)||(36895543-36895634)
chr1 (143-234)||(46638840-46638931)
chr1 (143-236)||(44157433-44157526)
chr1 (199-310)||(51123479-51123590)
chr1 (143-235)||(5783364-5783456)
chr1 (151-211)||(36894830-36894890)
chr1 (189-256)||(26223633-26223700)
chr1 (143-234)||(31801633-31801724)
chr1 (158-291)||(34041771-34041904)
chr1 (221-310)||(43870238-43870327)
chr1 (179-248)||(46582046-46582115)
chr1 (189-256)||(9120085-9120152)
chr1 (189-259)||(27089252-27089322)
[»] chr5 (34 HSPs)
chr5 (143-425)||(42619289-42619571)
chr5 (143-380)||(32089779-32090016)
chr5 (151-380)||(33257614-33257843)
chr5 (143-349)||(40330400-40330606)
chr5 (143-380)||(18726565-18726799)
chr5 (143-349)||(32835876-32836082)
chr5 (143-380)||(35291048-35291285)
chr5 (158-380)||(38176647-38176869)
chr5 (158-380)||(38203871-38204093)
chr5 (197-380)||(43316834-43317017)
chr5 (151-348)||(24232159-24232357)
chr5 (143-337)||(1344711-1344905)
chr5 (143-236)||(38596868-38596961)
chr5 (143-236)||(35395333-35395426)
chr5 (143-234)||(18728635-18728726)
chr5 (143-234)||(33256400-33256491)
chr5 (143-234)||(43318093-43318184)
chr5 (143-232)||(32087514-32087603)
chr5 (143-234)||(35292415-35292505)
chr5 (143-234)||(38178126-38178217)
chr5 (143-234)||(38205350-38205441)
chr5 (143-256)||(24498045-24498158)
chr5 (226-321)||(1343304-1343399)
chr5 (155-234)||(24496755-24496834)
chr5 (179-256)||(40782187-40782264)
chr5 (328-380)||(25509706-25509758)
chr5 (189-248)||(7269430-7269489)
chr5 (153-248)||(12738720-12738815)
chr5 (153-248)||(12801543-12801638)
chr5 (153-232)||(17574328-17574407)
chr5 (179-248)||(8541255-8541324)
chr5 (307-380)||(24497914-24497987)
chr5 (179-232)||(24541247-24541300)
chr5 (179-256)||(29620174-29620251)
[»] chr3 (57 HSPs)
chr3 (188-425)||(37865429-37865666)
chr3 (143-380)||(45897050-45897287)
chr3 (143-380)||(48635227-48635464)
chr3 (143-349)||(23887198-23887404)
chr3 (143-380)||(40508493-40508730)
chr3 (143-380)||(33850982-33851219)
chr3 (143-349)||(33111841-33112047)
chr3 (146-380)||(45255486-45255720)
chr3 (151-425)||(41945908-41946182)
chr3 (143-349)||(1847530-1847736)
chr3 (151-339)||(18428757-18428942)
chr3 (143-352)||(2975460-2975669)
chr3 (143-380)||(40998515-40998752)
chr3 (158-348)||(24381759-24381950)
chr3 (210-341)||(23775546-23775677)
chr3 (158-349)||(31885533-31885723)
chr3 (143-234)||(23774152-23774243)
chr3 (143-234)||(40508944-40509035)
chr3 (143-248)||(23888791-23888896)
chr3 (225-380)||(30501199-30501354)
chr3 (143-234)||(41021036-41021127)
chr3 (218-291)||(51453878-51453951)
chr3 (143-234)||(48633877-48633968)
chr3 (143-248)||(31887471-31887576)
chr3 (143-234)||(2977362-2977453)
chr3 (143-230)||(18430308-18430395)
chr3 (143-234)||(33113213-33113304)
chr3 (143-234)||(51454283-51454374)
chr3 (190-310)||(33051390-33051509)
chr3 (143-234)||(45898381-45898472)
chr3 (143-232)||(41944576-41944665)
chr3 (143-234)||(24382926-24383017)
chr3 (207-380)||(26447818-26447984)
chr3 (143-234)||(45257253-45257344)
chr3 (189-248)||(53092669-53092728)
chr3 (206-309)||(49494539-49494643)
chr3 (153-248)||(38193494-38193589)
chr3 (153-248)||(46308817-46308912)
chr3 (189-248)||(46611287-46611346)
chr3 (153-248)||(53094257-53094352)
chr3 (221-310)||(5127371-5127460)
chr3 (307-380)||(17260657-17260730)
chr3 (143-256)||(40963376-40963489)
chr3 (153-232)||(2226207-2226286)
chr3 (189-248)||(3150298-3150357)
chr3 (189-256)||(28626457-28626524)
chr3 (153-232)||(30599973-30600052)
chr3 (193-232)||(33852705-33852744)
chr3 (189-248)||(38191941-38192000)
chr3 (143-234)||(39641872-39641963)
chr3 (153-232)||(41979352-41979431)
chr3 (189-248)||(46310420-46310479)
chr3 (189-248)||(53187788-53187847)
chr3 (153-232)||(53190814-53190893)
chr3 (153-248)||(54900058-54900153)
chr3 (158-248)||(23291585-23291675)
chr3 (179-248)||(46609185-46609254)
[»] scaffold1041 (2 HSPs)
scaffold1041 (199-349)||(2776-2926)
scaffold1041 (166-349)||(2121-2296)
[»] scaffold0477 (1 HSPs)
scaffold0477 (143-232)||(6669-6758)
[»] scaffold0070 (1 HSPs)
scaffold0070 (240-349)||(57498-57603)
[»] scaffold1712 (1 HSPs)
scaffold1712 (189-256)||(1028-1095)
[»] scaffold0081 (1 HSPs)
scaffold0081 (189-256)||(54234-54301)
[»] scaffold0058 (1 HSPs)
scaffold0058 (189-248)||(14327-14386)


Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 143 - 425
Target Start/End: Original strand, 30108565 - 30108847
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30108565 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 30108664  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30108665 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 30108764  T
Q  343 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30108765 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctcttccttctc 30108847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 143 - 425
Target Start/End: Complemental strand, 45465275 - 45464993
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||| ||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45465275 gagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 45465176  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45465175 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 45465076  T
Q  343 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  45465075 cgataatgacctaaattttcaaggactaagttgattgaattacaggaaattgctcttcttccccaacggctctcttccttctc 45464993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 143 - 380
Target Start/End: Original strand, 46994660 - 46994897
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46994660 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 46994759  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  46994760 aatcaagttagtccttctgttcaaacggagcgttaacgggggtgacgtggtcgttaacctttcacatgtcagacgccacgtaggcagagactaatttggc 46994859  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||| | ||  | ||||  ||||||||| ||||||||    
T  46994860 cgatagtaacaaacatttcgaaggactaaattgattga 46994897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 144 - 380
Target Start/End: Original strand, 3690151 - 3690387
Alignment:
Q  144 agtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtca 243  Q
    |||||| |||||| ||||||| ||||||||||| | ||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3690151 agtgaatcatcaacttcgtccttgaatttttacagttcggccaacttcgttcctcaattatgcgaaatatcaatttaatccttgaatttgttaaatgtca 3690250  T
Q  244 atcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggcc 343  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||     
T  3690251 atcaagttagtccttctattcaaacggagcgttaacggggctgacgtgatcgttaacctctcacatgtcaggcgccacgtaggcagggactaatttggct 3690350  T
Q  344 gataatgacctaaattttcaaggactaagttgattga 380  Q
    |||||| ||  | ||||  ||||||||| ||||||||    
T  3690351 gataataacaaacatttcgaaggactaaattgattga 3690387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 143 - 380
Target Start/End: Original strand, 33775408 - 33775645
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| | |||| ||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  33775408 gagtgaatcgtcaacttcgtccctgaatttttacgggtcggtcaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttattaaatgtc 33775507  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33775508 aatcaagttagtccttctgttcaaacggagcattaacggggctgacatgaccgttaacctttcacatgtcagacgccacgtaggcagggactaatttggc 33775607  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  33775608 cgataataacaaacatttcgaaggactaaattgattga 33775645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 151 - 380
Target Start/End: Complemental strand, 36762763 - 36762534
Alignment:
Q  151 catcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagt 250  Q
    |||||| |||||||||||||||||||||||||||||  || |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  36762763 catcaacttcgtccctgaatttttacggatcggccaaattagtccctcaattatgtgaaatatcaatttaacccctgaatttgttaaatgtcaatcaagt 36762664  T
Q  251 tagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatg 350  Q
    |||  |||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||     
T  36762663 tagctcttctgttcaaacggagcgttaacgggactgacgtggccgttaacctctcacatgtcagacgccacatagacagggactaatttggccgataata 36762564  T
Q  351 acctaaattttcaaggactaagttgattga 380  Q
    ||  | ||||  ||||||||| ||||||||    
T  36762563 acaaacatttcgaaggactaaattgattga 36762534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 143 - 380
Target Start/End: Original strand, 35342425 - 35342662
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| || ||||||||||| |||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35342425 gagtgaatcatcaacttagtccctgaattattacgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 35342524  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| |||||||||| | ||||||||  |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  35342525 aatcaatttagtccttctggtcaaacgggccgttaacggggctgacgtggtcgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 35342624  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    |||||||  |  | ||||| ||||||||| ||||||||    
T  35342625 cgataattccaaacattttgaaggactaaattgattga 35342662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 145 - 380
Target Start/End: Original strand, 46810707 - 46810941
Alignment:
Q  145 gtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaa 244  Q
    ||||| |||||| |||||||||||||||| ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46810707 gtgaatcatcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaa 46810806  T
Q  245 tcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccg 344  Q
    ||||||||| |||||  ||||||| ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  46810807 tcaagttag-ccttctattcaaacagagcgttaacgggactgatgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggtcg 46810905  T
Q  345 ataatgacctaaattttcaaggactaagttgattga 380  Q
    || || ||  | ||||  ||||||||| ||||||||    
T  46810906 atgataacaaacatttcgaaggactaaattgattga 46810941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 144 - 380
Target Start/End: Complemental strand, 36756973 - 36756737
Alignment:
Q  144 agtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtca 243  Q
    |||||| |||||| ||||| |||||||||| | ||||||| ||  || |||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  36756973 agtgaatcatcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaatttgttaaatgtca 36756874  T
Q  244 atcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggcc 343  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  36756873 atcaagttagcccttctgttcaaacggagcgttaacgggactgacgtggccgttaacctctcacatgtcagacgccacatagacagggactaatttggcc 36756774  T
Q  344 gataatgacctaaattttcaaggactaagttgattga 380  Q
    |||||| ||  | ||||  ||||||||| ||||||||    
T  36756773 gataataacaaacatttcgaaggactaaattgattga 36756737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 144 - 380
Target Start/End: Complemental strand, 36766497 - 36766261
Alignment:
Q  144 agtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtca 243  Q
    |||||| |||||| ||||| |||||||||| | ||||||| ||  || |||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  36766497 agtgaatcatcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaatttgttaaatgtca 36766398  T
Q  244 atcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggcc 343  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  36766397 atcaagttagcccttctgttcaaacggagcgttaacgggactgacgtggccgttaacctctcacatgtcagacgccacatagacagggactaatttggcc 36766298  T
Q  344 gataatgacctaaattttcaaggactaagttgattga 380  Q
    |||||| ||  | ||||  ||||||||| ||||||||    
T  36766297 gataataacaaacatttcgaaggactaaattgattga 36766261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 151 - 348
Target Start/End: Original strand, 33037701 - 33037899
Alignment:
Q  151 catcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaattt-aatccctgaatttgttaaatgtcaatcaag 249  Q
    |||||| ||||||| |||||||||| |  |||||||  ||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  33037701 catcaagttcgtccttgaatttttatgtgtcggccaaattcatccctcaattatgtgaaatatcaattttaatccctgaatttgttaaatgtcaatcaag 33037800  T
Q  250 ttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataa 348  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33037801 ttagtccttctgttcaaacggagcgttagcagggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagagactaatttggccgataa 33037899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 258 - 425
Target Start/End: Original strand, 4321199 - 4321365
Alignment:
Q  258 tcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaa 357  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  4321199 tcagttcaaacggagcgttgacgggactgacgtggccgttaacctctcacatatcagacgccacgtaggcagggactaatttggccgataatgacct-aa 4321297  T
Q  358 ttttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  4321298 ttttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaatggctctcttccttctc 4321365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 2168925 - 2168688
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||| ||||||||||| | ||| |||  ||| ||||| ||||| |  ||||||||||||| ||| |||||||||||||||||    
T  2168925 gagtgaatcatcaacttcgtccttgaatttttactggtcgtccaaattcatcccttaattaagaaaaatatcaatttagtccttgaatttgttaaatgtc 2168826  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2168825 aatcaagttagtccttctgttcaaacggagcattaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcagtgactaatttggc 2168726  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  2168725 cgataataactaacatttcaaaggactaaattgattga 2168688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 143 - 380
Target Start/End: Original strand, 8421416 - 8421653
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| || ||||||||||| | |||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8421416 gagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 8421515  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| |||||||||| | ||||||||  |||||||||||||||||||| ||||||||||| |||||||| |||||||||| ||| |||||||||||||    
T  8421516 aatcaatttagtccttctggtcaaacgggccgttaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtatgcaaggactaatttggc 8421615  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    |||||||  |  | ||||| ||||||||| ||||||||    
T  8421616 cgataattccaaacattttgaaggactaaattgattga 8421653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 38614883 - 38614646
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| | ||||| |||||||||| || |||| ||  ||| |||||||||||||| ||||||||| ||| ||| ||| |||||||||||||    
T  38614883 gagtgaatcatcaactacgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccttgagtttgttaaatgtc 38614784  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||  ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38614783 aatcaagttagtccttatgttcaaacggagcgttaacggggttgacgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 38614684  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  38614683 cgataataacaaacatttcaaaggactaaattgattga 38614646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 143 - 348
Target Start/End: Complemental strand, 40785639 - 40785434
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||||||||||| |||||||| |||| |||||||  ||| || |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  40785639 gagtgaatcatcaatttcgtccttgaattttcacgggtcggccaaattcatctctcaattatgtgaaatatcaatctaatccctgaatttgttaaatgtc 40785540  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||| ||| ||||||| ||||| |||||||| ||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  40785539 aatcaagttagtctttctgttcaaatggagcattaacgggactgacgtggccgttaacatctcacatgtcagacgccacgtaggtagggactaatttggc 40785440  T
Q  343 cgataa 348  Q
    ||||||    
T  40785439 cgataa 40785434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 151 - 380
Target Start/End: Original strand, 47339784 - 47340013
Alignment:
Q  151 catcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagt 250  Q
    |||||| ||||||||||||||| ||||| ||||||| ||||||| |||||| |||||||||||||||||||||  |||||||||||||||||||||||||    
T  47339784 catcaacttcgtccctgaatttctacgggtcggccaacttcgtctctcaatgatgcgaaatatcaatttaatctttgaatttgttaaatgtcaatcaagt 47339883  T
Q  251 tagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatg 350  Q
    || |||||| |||||||||||| ||||||||||||||||||   |||||||||||||||||||| |||||||||| ||| |||||||||||||||||||     
T  47339884 taatccttctgttcaaacggagtgttaacggggctgacgtgactgttaacctctcacatgtcaggcgccacgtagacagagactaatttggccgataata 47339983  T
Q  351 acctaaattttcaaggactaagttgattga 380  Q
    ||  | ||||  ||||||||| ||||||||    
T  47339984 acacacatttcgaaggactaaattgattga 47340013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 23955376 - 23955139
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||| ||||||||||| |||| |||||  ||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||    
T  23955376 gagtgaatcatcaacttcgtctctgaatttttatggattggccaaattcgtcccttaattatgtgaaatatcaatttaatctctgaatttgttaaatgtc 23955277  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||| ||  ||||||||||| ||||||||||||||||||||  | |||||||||||||||||||||||| |||||| ||||||||||| ||    
T  23955276 aatcaagttagtcattatgttcaaacggaccgttaacggggctgacgtggcagctaacctctcacatgtcagacgccatgtaggcggggactaatttcgc 23955177  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  23955176 cgataataacaaacatttcgaaggactaaattgattga 23955139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 143 - 306
Target Start/End: Original strand, 4321038 - 4321201
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4321038 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 4321137  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctca 306  Q
    ||||||||||||||||||||||||| |||||||| | ||||||||||||| |||||||||||||    
T  4321138 aatcaagttagtccttcagttcaaatggagcgttgatggggctgacgtggccgttaacctctca 4321201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 189 - 425
Target Start/End: Original strand, 48302197 - 48302434
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgac 288  Q
    ||||||||||||||   |||||||||||  || || |||||||||| ||||||   |||| || ||||||| || |||| |||| |||||||| |||||     
T  48302197 ttcgtccctcaatttaacgaaatatcaaaatagtctctgaatttgtaaaatgttcgtcaattttgtccttccgtccaaatggagggttaacggtgctgat 48302296  T
Q  289 gtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattgaatttcagg 388  Q
    |||||||||||| ||||| |||||||| |||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  48302297 gtggtcgttaacatctcatatgtcagatgccacgtaagcaggaactaagttggccgataatgacttaaattttcaaggactaagttgattgaatttcaga 48302396  T
Q  389 aaattgctcttctt-ccccaacggctctctttcttctc 425  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  48302397 aaattgctcttcttcccccaacggctctcttccttctc 48302434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 158 - 380
Target Start/End: Complemental strand, 34785188 - 34784966
Alignment:
Q  158 ttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcct 257  Q
    ||||||||||||||| |||| ||||||||   ||||||  ||| |   |||||||||||  || ||||||||||||| ||||||||||||| |||||||     
T  34785188 ttcgtccctgaatttgtacgaatcggccaaagtcgtcctccaaattaacgaaatatcaaaatagtccctgaatttgtaaaatgtcaatcaatttagtccc 34785089  T
Q  258 tcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaa 357  Q
    || || |||  |||| |||||||| ||||||||||||||||||||||||||||||||| ||||| || ||| ||||||||||||| |||| ||||| |||    
T  34785088 tccgtccaattggagtgttaacggtgctgacgtggtcgttaacctctcacatgtcagatgccacataagcaaggactaatttggctgatagtgaccaaaa 34784989  T
Q  358 ttttcaaggactaagttgattga 380  Q
    ||||||||||| || ||||||||    
T  34784988 ttttcaaggacaaaattgattga 34784966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 222 - 418
Target Start/End: Complemental strand, 34692760 - 34692571
Alignment:
Q  222 tccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccac 321  Q
    ||||||||||||| ||||||| ||||| || |||| || || ||||  |||  ||||||| |||||||||  ||||||||| ||||||||||       |    
T  34692760 tccctgaatttgtaaaatgtccatcaattttgtccctccgtccaaattgaggattaacggtgctgacgtgaccgttaacctttcacatgtca-------c 34692668  T
Q  322 gtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctt 418  Q
    ||| ||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| |||||| |||||| ||||||||||||||| |||||||    
T  34692667 gtaagcagggactaagttggccgataatgacctaaatatccaaggactaagttgattgattttcagaaaattgatcttcttccccaacgactctctt 34692571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 8423405 - 8423316
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||||||| ||||||||||||| |||| || ||||  || |||||||||||||||||||||||||||||||||||||||||    
T  8423405 gagtgaaccatcaatttagtccctgaattttcacgggtcagccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaattt 8423316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 35344414 - 35344325
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||||||| ||||| ||||||| |||| || ||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  35344414 gagtgaaccatcaatttagtccccgaattttcacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 35344325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 236 - 380
Target Start/End: Original strand, 34784132 - 34784276
Alignment:
Q  236 aaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggacta 335  Q
    ||||||||||||| ||||||| || || |||  | || |||||||| |||||||||| |||||||||||||||||||| | ||||| || ||||||||||    
T  34784132 aaatgtcaatcaatttagtccctccgtccaattgcagtgttaacggtgctgacgtggccgttaacctctcacatgtcatatgccacataagcagggacta 34784231  T
Q  336 atttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||| | |||| ||||| |||||| ||||||| || ||||||||    
T  34784232 atttgactgatagtgaccaaaatttccaaggacgaaattgattga 34784276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 46996826 - 46996735
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| |||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||    
T  46996826 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgt 46996735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 47341810 - 47341719
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||| |||||||| |||| |||||||  ||| |||||||||||||||||||||||| ||| |||||||||||||    
T  47341810 gagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 47341719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 38613605 - 38613514
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||| | |||||| |||| |||||||  ||| |||||||||||||||||||||||| ||| |||||||||||||    
T  38613605 gagtgaaccatcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 38613514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 46812706 - 46812615
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||| ||||||||||||  |||||||  ||| ||||||||||| | |||||||||||||| ||||| |||||||    
T  46812706 gagtgaaccatcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgt 46812615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 248
Target Start/End: Original strand, 23953805 - 23953910
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    |||||||||||||| ||||||| | ||||||||||| ||||  |  ||||||| |||||||||||||||||||| ||| ||| ||||||||| | | |||    
T  23953805 gagtgaaccatcaaattcgtccttaaatttttacgggtcggtaaaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgtcagacgtc 23953904  T
Q  243 aatcaa 248  Q
    ||||||    
T  23953905 aatcaa 23953910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 33038921 - 33038832
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||| |||||| ||||||| |||||||||| || |||| ||  ||| |||||||||||||||||||||||| ||| |||||||||||    
T  33038921 gagtgaatcatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaattt 33038832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 45463670 - 45463762
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    ||||||||||||||||||||||||||||||| | || |||||||  ||||||||| ||||   |||||||||||  || ||||||||||||||    
T  45463670 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtt 45463762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 310
Target Start/End: Complemental strand, 11685676 - 11685563
Alignment:
Q  197 tcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgt 296  Q
    |||||||| |||||||| || ||| |  |||||||||| | ||||||||||| ||||||  || || |||  |||| |||||||| |||||||||| |||    
T  11685676 tcaattatacgaaatattaaattagtttctgaatttgtcatatgtcaatcaatttagtcactctgtccaattggagtgttaacggtgctgacgtggccgt 11685577  T
Q  297 taacctctcacatg 310  Q
    ||||||||||||||    
T  11685576 taacctctcacatg 11685563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 2167479 - 2167570
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| |  |||| ||||||  ||||| |||| ||  ||| |||||||||||||||||||||||| ||| |||||||||||||    
T  2167479 gagtgaaccatcaaatatgtccttgaattagtacgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 2167570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 27955370 - 27955461
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    ||||||| |||||| ||||||| |||||||||||||||| || |  ||| |||||||||| | ||||||||||| |||||  ||||||||||    
T  27955370 gagtgaatcatcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgt 27955461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 4322696 - 4322604
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    |||| ||||||||||||||||||||||| || | ||||||||||   ||||||| |||||   |||||||||||  || ||||||||||||||    
T  4322696 gagtaaaccatcaatttcgtccctgaatattcagggatcggccaaactcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtt 4322604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 35403698 - 35403603
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  35403698 tcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 35403603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 38615035 - 38614944
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    ||||||| |||||| ||||||| | |||||| |||| |||  ||  ||| ||||||||||||||||||||| || ||| |||||||||||||    
T  38615035 gagtgaaacatcaaattcgtccttaaattttcacgggtcgatcaaattcatccctcaattatgcgaaatattaacttagtccctgaatttgt 38614944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 20479772 - 20479695
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||  ||||||||| |||| | ||||||||||| ||| |||||||||||   ||||||||||||| |||||||    
T  20479772 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 20479695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 34690995 - 34691048
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccc 196  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||  ||||||||    
T  34690995 gagtaaaccatcaatttcatccctgaatttttagggatcggccaaattcgtccc 34691048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 380
Target Start/End: Complemental strand, 43009591 - 43009518
Alignment:
Q  307 catgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||||| | ||| || | |||||||||||||||||||| ||||| |||||| ||||||| || ||||||||    
T  43009591 catgtcagatgtcacataagtagggactaatttggccgatagtgaccaaaatttccaaggacgaaattgattga 43009518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 30109789 - 30109717
Alignment:
Q  144 agtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaa 216  Q
    |||||||||||||||||||||||||||||| | || |||||||  ||||||||  ||||   |||||||||||    
T  30109789 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaa 30109717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 13169762 - 13169667
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  || |||||| |||| ||||||||||| ||||| |||||||||||   |||||||||||||    
T  13169762 tcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaa 13169667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 27666179 - 27666100
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  27666179 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 27666100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 35402015 - 35402074
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  35402015 ttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 35402074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 40784346 - 40784437
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||| | ||||||||||||  || || |  ||| ||| |||||||||||||||||||| ||| ||  |||||||||    
T  40784346 gagtgaaccatcaaattcgttcttgaatttttacgcgtcagctaaattcatccttcaattatgcgaaatatcaacttagtctttgaatttgt 40784437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 311
Target Start/End: Complemental strand, 6058483 - 6058393
Alignment:
Q  221 atccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgt 311  Q
    |||| ||||||||| | || |||||||| |||||||||  || ||   || |||||||||| | |||||||| ||||||||||||||||||    
T  6058483 atccttgaatttgtcatatctcaatcaaattagtccttacgtccatttggggcgttaacggtgatgacgtggccgttaacctctcacatgt 6058393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 11682828 - 11682894
Alignment:
Q  190 tcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||||||||||| ||||||||| ||| ||| |||||| |||| | ||| ||||| |||||||    
T  11682828 tcgtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaatttagtcc 11682894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 2492327 - 2492416
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||| ||||||||| |||||||  |||||||||||| |||| ||   |  ||| |||||||||||||||||||| ||||| | |||||||    
T  2492327 gagtaaaccatcaaattcgtcctcgaatttttacgggtcggtcaaaattatccttcaattatgcgaaatatcaacttaatacttgaattt 2492416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 29996589 - 29996549
Alignment:
Q  192 gtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||||| |||| ||||||||||||| |||||||||||||||    
T  29996589 gtccctgaattttgcgaaatatcaaattaatccctgaattt 29996549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 143 - 425
Target Start/End: Original strand, 17950561 - 17950843
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17950561 gagtgaaccatcaatttcatccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 17950660  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17950661 aatcaagtcagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagatgccacgtaggcagggactaatttggc 17950760  T
Q  343 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  17950761 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctcgtccttctc 17950843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 143 - 425
Target Start/End: Original strand, 35174391 - 35174664
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||| ||||||  ||||||||| |||||||||||||||||  ||||||||||||||||||    
T  35174391 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtttctcaattatacgaaatatcaatttaatttctgaatttgttaaatgtc 35174490  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35174491 aatcaagttagtccttcagttcaaacggagcgttaacggggc---------cgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 35174581  T
Q  343 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35174582 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctcttccttctc 35174664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 143 - 349
Target Start/End: Original strand, 30639611 - 30639817
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| |||||||  || ||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  30639611 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaatttaatctatgaatttgttaaatgtc 30639710  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| |||| ||||  ||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||    
T  30639711 aatcaacttagcccttatgttcaaacggagcattaacggggctgacgtggccgttaacctctcacatgtcaaacgccacgtaggcagggagtaatttggc 30639810  T
Q  343 cgataat 349  Q
    |||||||    
T  30639811 cgataat 30639817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 151 - 425
Target Start/End: Complemental strand, 34345407 - 34345133
Alignment:
Q  151 catcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagt 250  Q
    |||||| || ||||||||||||  || ||||| |||  | ||||||||||||    ||||||||||  || ||||||||||||| ||||| |  |||| |    
T  34345407 catcaacttggtccctgaatttgcactgatcgaccaaatccgtccctcaatttaatgaaatatcaaaatagtccctgaatttgtaaaatgcctgtcaatt 34345308  T
Q  251 tagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatg 350  Q
    | |||| || || |||| |||| |||||||| | || |||||||||||||||||||||||||| | |||||||| | ||||||||| |||||||||||||    
T  34345307 ttgtccctccgtccaaatggagggttaacggtgttggcgtggtcgttaacctctcacatgtcaaatgccacgtaagtagggactaagttggccgataatg 34345208  T
Q  351 acctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  34345207 acctaaattttcaaggactaagttgattgaatttcaggaaattgctcttattccccaacggctctcttccttctc 34345133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 4646307 - 4646070
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    |||||||||||||| ||  ||||||||||||||||||||||  |  ||||||| |||||||||||||||||||||||||||||| |||||||||| ||||    
T  4646307 gagtgaaccatcaacttaatccctgaatttttacggatcggttaaattcgtccatcaattatgcgaaatatcaatttaatccctaaatttgttaattgtc 4646208  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| |||||||||| | ||||||||  |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||  |    
T  4646207 aatcaatttagtccttctggtcaaacgggccgttaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttaac 4646108  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
     ||||||  |  | ||||| ||||||||| ||||||||    
T  4646107 agataattccaaacattttgaaggactaaattgattga 4646070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 29114867 - 29114630
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    |||||||||||||| || ||||||||||||| |||  |||||||  || |||| ||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  29114867 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccttcaattatgcgaaatttcaatttcatccctgaatttgttaattgtc 29114768  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| |||||||||| | ||||||||  | |||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  29114767 aatcaatttagtccttctggtcaaacgggccattaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 29114668  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
     ||||||  |  | ||||| ||||||||| ||||||||    
T  29114667 tgataattccaaacattttgaaggactaaattgattga 29114630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 151 - 425
Target Start/End: Original strand, 4289426 - 4289700
Alignment:
Q  151 catcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagt 250  Q
    |||||| || || |||||||||  || |||||| ||  ||||||||||||||    ||||||||||  || ||||| ||||||| ||||| |  |||| |    
T  4289426 catcaacttggttcctgaatttgcactgatcggtcaaattcgtccctcaatttaatgaaatatcaaaatagtccctaaatttgtaaaatgcctgtcaatt 4289525  T
Q  251 tagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatg 350  Q
    | |||| || || |||| |||| |||||| | ||||||||||||||||||||||||| ||||||| |||||||| || | ||| || |||||||||||||    
T  4289526 ttgtccctccgtccaaatggagggttaacagtgctgacgtggtcgttaacctctcacttgtcagatgccacgtaagctgagacaaagttggccgataatg 4289625  T
Q  351 acctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  4289626 acctaaattttcaaagactaagttgattgaatttcaggaaattgctcttctttcccaacggctctcttccttctc 4289700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 4641355 - 4641444
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||  ||||||||||||||||| ||||||||||||||||||||||||||    
T  4641355 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaattt 4641444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 144 - 380
Target Start/End: Complemental strand, 31210530 - 31210284
Alignment:
Q  144 agtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtca 243  Q
    |||||| |||||  ||||| | ||||||| || ||||||| ||   |||||||| ||||||||||||||| || | ||||||||||||||||| |||| |    
T  31210530 agtgaatcatcagcttcgttcttgaatttgtaaggatcggtcaaaatcgtcccttaattatgcgaaatattaaataaatccctgaatttgttatatgtaa 31210431  T
Q  244 atcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctca----------catgtcagacgccacgtaggcagggac 333  Q
    ||||| ||||||| || || |||   | | |||||||| | |||||||| |||||||||||||          ||||||| | |||||  | ||||| ||    
T  31210430 atcaatttagtccctccgtccaatttgggtgttaacggtgttgacgtggccgttaacctctcacatgggtcttcatgtcatatgccacacaagcaggaac 31210331  T
Q  334 taatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  31210330 taatttggccgataataaccaaaattttcaaggactaaattgattga 31210284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 2968139 - 2968228
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||||||| |||||| |||||| |||| ||  |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  2968139 gagtgaaccatcaatttagtccctcaattttcacgggtctcccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 2968228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 29077328 - 29077419
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| |||||||||||||||| |||  |||||||  || |||||||||||||||||||| ||||||| ||||||||||||||    
T  29077328 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 29077419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 3018541 - 3018465
Alignment:
Q  158 ttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  3018541 ttcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 3018465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 29112300 - 29112391
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| || ||||||||||||| |||  |||||||  || |||||||||||||||||||| ||||||| ||||||||||||||    
T  29112300 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 29112391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 17952166 - 17952074
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    ||||||||||||||||||||||||||||||| | || |||||||  ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  17952166 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 17952074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 35175987 - 35175895
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    |||||||||||||||||||||| |||||||| | ||||||||||  |||||| |  ||||   |||||||||||  || ||||||||||||||    
T  35175987 gagtgaaccatcaatttcgtccttgaattttcagggatcggccaaattcgtctccaaatttaacgaaatatcaaaatagtccctgaatttgtt 35175895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 3018587 - 3018528
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaatt 202  Q
    |||||||||||||| |||||||||||||||| |||  ||||||| |||||||||| ||||    
T  3018587 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctgaatt 3018528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 32518576 - 32518481
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  ||| ||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  32518576 tcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 32518481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 3480710 - 3480633
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||  ||||||||| |||| | |||||||||||  || |||||||||||   ||||||||||||| |||||||    
T  3480710 atcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaatttacaaaatgtcaatcaaattagtcc 3480633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 256
Target Start/End: Original strand, 32454284 - 32454361
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||  ||||||| | |||| | ||||||||||| ||| |||||||||||   ||||||||||||| |||||||    
T  32454284 atcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 32454361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 143 - 425
Target Start/End: Complemental strand, 39085243 - 39084961
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39085243 gagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgttaaatgtc 39085144  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39085143 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 39085044  T
Q  343 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  39085043 cgataatgacctaaattttcaaggactaagttgattgaattacaggaaattgctcttcttccccaacggctctcttccttctc 39084961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 143 - 425
Target Start/End: Original strand, 44992808 - 44993090
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44992808 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgagtttgttaaatgtc 44992907  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44992908 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcagagactaatttggc 44993007  T
Q  343 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  44993008 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgcttttcttccccaacggctctcttccttctc 44993090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 143 - 425
Target Start/End: Complemental strand, 39923098 - 39922816
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    |||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39923098 gagtgaaccatcaatttcgtccctgaatttttacaggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 39922999  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| ||    
T  39922998 aatcaagttagtccttcggttcaaacggagtgttaacggggctgacgtggccgttaacctctcacctgtcagacgccacgtaggcagagactaatttagc 39922899  T
Q  343 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39922898 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctcttccttctc 39922816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 143 - 425
Target Start/End: Original strand, 43778389 - 43778671
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||| ||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43778389 gagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgttaaatgtc 43778488  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  43778489 aatcaagttagtccttcagttcaaacggaacgttaacggggctgacgtggccgttaacctctcacatgtcagatgccacgtaggtagggactaatttggc 43778588  T
Q  343 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  43778589 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttcctcaacggccctcttccttctc 43778671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 143 - 418
Target Start/End: Original strand, 42879275 - 42879559
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42879275 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgttaaatgtc 42879374  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcg---------ttaacctctcacatgtcagacgccacgtaggcagggac 333  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||    
T  42879375 aatcaagtcagtccttcagttcaaacggagcgttaacggggctgacgtggccgacgtggccgttaacctctcacatgtcagacgccacgtaggcagggac 42879474  T
Q  334 taatttggccgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctt 418  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42879475 taatttggccgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctt 42879559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 188 - 425
Target Start/End: Complemental strand, 39190865 - 39190628
Alignment:
Q  188 cttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctga 287  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  39190865 cttcgtccctcaattatgcgaaatatcaatttaatccgtgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggttga 39190766  T
Q  288 cgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattgaatttcag 387  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39190765 cgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattgaatttcag 39190666  T
Q  388 gaaattgctcttcttccccaacggctctctttcttctc 425  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  39190665 gaaattgctcttcttccccaacggctctcttccttctc 39190628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 143 - 425
Target Start/End: Complemental strand, 5486143 - 5485861
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||||||||||||||||||||||||||||| || |||||||  ||| ||||| ||||   |||||||||||  || |||||||||||||||||||||    
T  5486143 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatccctaaatttaacgaaatatcaaaatagtccctgaatttgttaaatgtc 5486044  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  5486043 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtgaccgttaacctctcacatgtcagatgtcacgtaggcagggactaatttggc 5485944  T
Q  343 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  5485943 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggttctcttccttctc 5485861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 2828502 - 2828265
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2828502 gagtgaatcatcaacttcgtccctgaatttttatgggtcggccaactttgtccctcaattatgcgaaatatcaatttaatccttgaatttgttaaatgtc 2828403  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| |||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2828402 aatcaagttagtccttctgttcaaactgagtgttaacgaggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 2828303  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||| ||||||||| ||||||||    
T  2828302 cgataataacaaacattttgaaggactaaattgattga 2828265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 35997858 - 35997621
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| || ||||||||||||| |||| |||||||  ||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  35997858 gagtgaatcatcaactttgtccctgaattttcacgggtcggccaaattcgttcctcaattataagaaatatcaatttaatccctgaatttgttaattgtc 35997759  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  35997758 aatcaatttagtccttctgttcaaacggagcattaacggggctgacgtggtcgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 35997659  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  35997658 cgataataacaaacatttcaaaggactaacttgattga 35997621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 151 - 425
Target Start/End: Complemental strand, 32653714 - 32653440
Alignment:
Q  151 catcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagt 250  Q
    |||||| || || |||||||||  || |||||| ||  ||||||| ||||||   |||||||||||  || | ||||||||||| ||||||   |||| |    
T  32653714 catcaacttggttcctgaatttgcactgatcggtcaaattcgtccttcaatttaacgaaatatcaaaatagtgcctgaatttgtaaaatgttcgtcaatt 32653615  T
Q  251 tagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatg 350  Q
    | |||| || || |||| |||| |||||||| ||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||||||    
T  32653614 ttgtccctccgtccaaatggagggttaacggtgctgacgtggtcgttaacctctcacatgtcagatgccacgtaagcaaggactaagttggccgataatg 32653515  T
Q  351 acctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32653514 acctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctcttccttctc 32653440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 143 - 380
Target Start/End: Original strand, 10371057 - 10371294
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    |||||||||||||| || ||||||||||||| |||  ||||| |  || |||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  10371057 gagtgaaccatcaacttagtccctgaattttcacgcgtcggctaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgttaattgtc 10371156  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| |||||||||| | ||||||||  |||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  10371157 aatcaatttagtccttctggtcaaacggcccgttaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 10371256  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
     ||||||  |  | ||||| ||||||||| ||||||||    
T  10371257 tgataattccaaacattttgaaggactaaattgattga 10371294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 151 - 380
Target Start/End: Original strand, 44792942 - 44793171
Alignment:
Q  151 catcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagt 250  Q
    |||||| || ||||||||||| | |||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  44792942 catcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatt 44793041  T
Q  251 tagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatg 350  Q
    ||||||||| | ||||||||  |||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||  |||||     
T  44793042 tagtccttctggtcaaacgggccgttaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttggctaataatt 44793141  T
Q  351 acctaaattttcaaggactaagttgattga 380  Q
     |  | ||||| ||||||||| ||||||||    
T  44793142 ccaaacattttgaaggactaaattgattga 44793171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 192 - 425
Target Start/End: Complemental strand, 15450458 - 15450225
Alignment:
Q  192 gtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtg 291  Q
    |||||||||||   |||||||||||  || ||||||||||||| ||||||   |||| || |||| || || |||| |||| |||||||| |||||||||    
T  15450458 gtccctcaatttaacgaaatatcaaaatagtccctgaatttgtaaaatgttcgtcaattttgtccctccgtccaaatggagggttaacggtgctgacgtg 15450359  T
Q  292 gtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattgaatttcaggaaa 391  Q
    |||||||||||||||||| | ||| |||||||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  15450358 gtcgttaacctctcacattttagatgccacgtaagcaggaactaagttggcggataatgacctaaattttcatggactaagttgattgaatttcaggaaa 15450259  T
Q  392 ttgctcttcttccccaacggctctctttcttctc 425  Q
    ||||||||||||||||||||||||||| ||||||    
T  15450258 ttgctcttcttccccaacggctctcttccttctc 15450225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 199 - 380
Target Start/End: Complemental strand, 27626763 - 27626582
Alignment:
Q  199 aattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgtta 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  |||||    
T  27626763 aattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtacttctgttcaaacggagcgttaacggggctgacgtgaccgtta 27626664  T
Q  299 acctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
     |||||||||||| ||||| |||||||||| |||||||||||||||||||| ||  | ||||  ||||||||| ||||||||    
T  27626663 gcctctcacatgttagacgtcacgtaggcaaggactaatttggccgataataacaaacatttcgaaggactaaattgattga 27626582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 143 - 378
Target Start/End: Complemental strand, 10768041 - 10767806
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    |||||||||||||| || || |||||||||| |||  |||||||  || |||||||||||||||||||| ||| ||| ||||||||||||||||| ||||    
T  10768041 gagtgaaccatcaagttagttcctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcattttcatccctgaatttgttaattgtc 10767942  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| |||||||||| | ||||||||  | |||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  10767941 aatcaatttagtccttctggtcaaacgggccattaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 10767842  T
Q  343 cgataatgacctaaattttcaaggactaagttgatt 378  Q
     ||||||  |  | ||||| ||||||||| ||||||    
T  10767841 tgataattccaaacattttgaaggactaaattgatt 10767806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 143 - 378
Target Start/End: Complemental strand, 47942837 - 47942602
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| || || | |||||| | |||| |||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  47942837 gagtgaatcatcaacttagttcatgaattatcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgttaattgtc 47942738  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| ||| || ||| | ||||||||  |||||||||||||||||||| ||||||||||| |||||||| |||||||||||| |||||||||||||||    
T  47942737 aatcaatttaatcattctgatcaaacgggccgttaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggtagggactaatttggc 47942638  T
Q  343 cgataatgacctaaattttcaaggactaagttgatt 378  Q
    |||||||  |  | ||||| ||||||||| ||||||    
T  47942637 cgataattccaaacattttgaaggactaaattgatt 47942602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 143 - 349
Target Start/End: Complemental strand, 4520542 - 4520336
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||| |||||||||| |  |||||||  ||| ||| |||||||||||||||||||| ||| | | |||||||||||||||||    
T  4520542 gagtgaatcatcaacttcgtccttgaatttttatgagtcggccaaattcatccatcaattatgcgaaatatcaacttagttcttgaatttgttaaatgtc 4520443  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| | |||| | ||||| ||||||||||||||||||||||| |||| ||||||||||||    
T  4520442 aatcaagttagtccttctgttcaaacggagcgttaacggagctaatgtggcctttaacatctcacatgtcagacgccacgtaagcagagactaatttggc 4520343  T
Q  343 cgataat 349  Q
     ||||||    
T  4520342 tgataat 4520336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 166 - 348
Target Start/End: Original strand, 51040758 - 51040940
Alignment:
Q  166 tgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttca 265  Q
    |||||||| |||| |||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||  |||||    
T  51040758 tgaattttcacgggtcggccaaattcatccttcaattatgcgaaatatcaattcaatccctgaatttgttaaatgtcaatcaagtcagtccttttgttca 51040857  T
Q  266 aacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataa 348  Q
    |||||||| |||||||||||||||||  | |||||||||||||||||||| ||||| |||||| ||||||||||| |||||||    
T  51040858 aacggagcattaacggggctgacgtgaccattaacctctcacatgtcagatgccacataggcaaggactaatttgtccgataa 51040940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 189 - 380
Target Start/End: Original strand, 34460271 - 34460462
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgac 288  Q
    |||||| || |||||||| ||||||||||||||||||| |||||||||| |||| ||||| |||||| |||  ||||||| | ||||||| |||| ||||    
T  34460271 ttcgtctcttaattatgcaaaatatcaatttaatccctaaatttgttaattgtcgatcaatttagtcattctattcaaacagggcgttaaaggggatgac 34460370  T
Q  289 gtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    |||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||  | ||||  ||||||||| ||||||||    
T  34460371 gtggccgttaacctctcacatgtcatacgccacataggcagggactaatttggccgataataacaaacatttcgaaggactaaattgattga 34460462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 152 - 349
Target Start/End: Original strand, 44556629 - 44556815
Alignment:
Q  152 atcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagtt 251  Q
    ||||| || |||||||||||||||||| |||| ||  || |||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  44556629 atcaactttgtccctgaatttttacgggtcggtcaaattagtccctcaattatgtgaaatatcaatttagtccatgaatttgttaaatgtcaatcaagtt 44556728  T
Q  252 agtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataat 349  Q
    |||||||| |||           | |||||||||||||| |  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44556729 agtccttctgtt-----------taaacggggctgacgttgctgttaacctctcacatgtcagacgccacgtaggcggggactaatttggccgataat 44556815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 204 - 380
Target Start/End: Original strand, 2348817 - 2348990
Alignment:
Q  204 tgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctc 303  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||| || || |||| | | |||||| ||||||||||||||||||||| |||||||  |    
T  2348817 tgcgaaatatcaagttaatcc-tgaatttgttaattgtcaatcaatttggttcttctgcttaaacggggcgttaacggggctgacgtggccgttaac--c 2348913  T
Q  304 tcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    |||||||||| | |||||||||||||||||||||||| |||||||| ||  | ||||| ||||||||| ||||||||    
T  2348914 tcacatgtcatatgccacgtaggcagggactaatttgaccgataataacaaatattttgaaggactaaattgattga 2348990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 47941811 - 47941900
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||||||| |||||||||||||||||| |||| ||  |||||| |||||||||||||||||||||||||||||||||||||    
T  47941811 gagtgaaccatcaatttagtccctgaatttttacgggtcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaattt 47941900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 144 - 380
Target Start/End: Complemental strand, 6999390 - 6999156
Alignment:
Q  144 agtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtca 243  Q
    |||||| |||||||||||||| |||||||  ||| ||||||||  ||||||| ||||||    ||||||||||  || || |||||||||| |||| |||    
T  6999390 agtgaatcatcaatttcgtccttgaatttgcacgaatcggccaaattcgtccttcaatttaatgaaatatcaaaatagtctctgaatttgtaaaatatca 6999291  T
Q  244 atcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggcc 343  Q
    ||||| ||||||| || || |||  |||| |||||||| ||| |||||  | ||||||||||  |||| ||| ||||| || ||||| ||||||||||||    
T  6999290 atcaatttagtccctccgtccaattggagtgttaacggtgctaacgtgaccattaacctctct-atgttagatgccacataagcagg-actaatttggcc 6999193  T
Q  344 gataatgacctaaattttcaaggactaagttgattga 380  Q
     ||| ||||| |||||||||||||| || ||||||||    
T  6999192 aatagtgaccaaaattttcaaggacgaaattgattga 6999156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 199 - 315
Target Start/End: Complemental strand, 43823604 - 43823489
Alignment:
Q  199 aattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgtta 298  Q
    |||| ||||||||| ||||||||||  | ||||||| |||||||||||||||||||| ||| |||||| ||| |||||||||| |||||||||  |||||    
T  43823604 aattgtgcgaaataacaatttaatctttaaatttgtcaaatgtcaatcaagttagtcattctgttcaatcgg-gcgttaacggtgctgacgtgaccgtta 43823506  T
Q  299 acctctcacatgtcaga 315  Q
    |||||||||||||||||    
T  43823505 acctctcacatgtcaga 43823489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 10372830 - 10372739
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| |||||||||||||||| |||  |||||||  || |||||||||||||||||||||||||||| ||||||||||||||    
T  10372830 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgt 10372739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 2350631 - 2350542
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||||||| ||||||||||||| | || |||||||  || |||||||||||||||||||||||||||||||| ||||||||    
T  2350631 gagtgaaccatcaatttagtccctgaattttcatgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatctctgaattt 2350542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 143 - 368
Target Start/End: Complemental strand, 25995203 - 25994978
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||| | |||||  ||| ||||||||  ||  |||| |||||   |||||||||||  || | ||||||||||| |||||||    
T  25995203 gagtgaatcatcaacttcgtccataaatttgcacgaatcggccaaatttatcccccaatttaacgaaatatcaaaatagttcctgaatttgtaaaatgtc 25995104  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| ||| ||| || || |||  |||| |||| |   |||||||| |||||||||||||||||||||| | |  || || | | |||||||||||||    
T  25995103 aatcaatttattccctccgtccaattggagtgttagcattgctgacgtagtcgttaacctctcacatgtcatatgtgacataagtaaggactaatttggc 25995004  T
Q  343 cgataatgacctaaattttcaaggac 368  Q
    ||||||||||| ||||||||||||||    
T  25995003 cgataatgaccaaaattttcaaggac 25994978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 44794884 - 44794795
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||||||| ||||||||||||| ||   |||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  44794884 gagtgaaccatcaatttagtccctgaattttcacacgtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 44794795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 143 - 310
Target Start/End: Original strand, 230436 - 230603
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||  ||| ||| ||| || ||||||||||   ||||||||||||||||||||||||||| ||| || |||||||||  | |||||    
T  230436 gagtgaatcatcaactttatccttgagtttgtaaggatcggccaaaatcgtccctcaattatgcgaaatatcaaattagtctctgaatttggcatatgtc 230535  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatg 310  Q
     ||||| ||||||| || ||||||   | | |||||||| |||||||||| |||||||||||||||||    
T  230536 gatcaatttagtccctctgttcaatttgggtgttaacggtgctgacgtggccgttaacctctcacatg 230603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 10762581 - 10762672
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| |||||||||||||||| |||  |||||||  || |||||||||||||||||||| ||||||| ||||||||||||||    
T  10762581 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 10762672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 44558617 - 44558526
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||| |||||||| |||| |||||||  ||| |||||||||||||||||||||||| ||| |||||||||||||    
T  44558617 gagtgaaccatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 44558526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 368
Target Start/End: Complemental strand, 13450269 - 13450175
Alignment:
Q  274 gttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggac 368  Q
    |||||||| | |||||| |||||||||||||||||||| ||| | |||||| ||| |||||||||||||||||||||||| |||||| |||||||    
T  13450269 gttaacggtgatgacgtcgtcgttaacctctcacatgttagatgtcacgtaagcacggactaatttggccgataatgaccaaaatttccaaggac 13450175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 35996063 - 35996152
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||||||| ||| ||| ||||||| || |||| ||  |||||||||||||| ||| |||||||||||||||||||||||||    
T  35996063 gagtgaaccatcaatttagtctctggatttttatgggtcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaattt 35996152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 39083639 - 39083731
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    ||||||||||||||||||||||||||||||| | || |||||||  ||||||||| ||||   |||||||||||  || ||||||||||||||    
T  39083639 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtt 39083731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 5484540 - 5484632
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    |||||||||||||||||||||| |||||||||| || |||||||  ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  5484540 gagtgaaccatcaatttcgtccatgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 5484632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 39921494 - 39921586
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    ||||||||||||||||||||||||||||||| | || |||||||  ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  39921494 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 39921586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 39189383 - 39189474
Alignment:
Q  144 agtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    |||||||||||||||||||||||||||||| | || |||||||  ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  39189383 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 39189474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 4519376 - 4519448
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatca 215  Q
    |||||||| ||||| ||||||| ||||||||||| | | |||||  ||| |||||||||||||||||||||||    
T  4519376 gagtgaacaatcaaattcgtccttgaatttttaccggttggccaaattcatccctcaattatgcgaaatatca 4519448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 42880879 - 42880787
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    ||||||||||||||||| ||||||||||||| | || |||||||  ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  42880879 gagtgaaccatcaattttgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 42880787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 43779991 - 43779899
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    ||||||||| ||||||||||||||||||||| | || |||||||  ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  43779991 gagtgaaccttcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 43779899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 248
Target Start/End: Original strand, 43507177 - 43507272
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  43507177 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 43507272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 43508732 - 43508637
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  43508732 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 43508637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 51042054 - 51041963
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    ||||||||| |||| ||||||| | ||||||||| | |||| ||  ||| ||||||||||||| |||||||||| ||| ||| |||||||||    
T  51042054 gagtgaaccgtcaaattcgtccttaaatttttacaggtcggtcaaattcatccctcaattatgtgaaatatcaacttagtccatgaatttgt 51041963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 256
Target Start/End: Original strand, 833259 - 833336
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||  ||||||||| |||||| |||||||||||  || |||||||||||   ||||||||||||| |||||||    
T  833259 atcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtcc 833336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 5439700 - 5439623
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||  ||||||||| |||||| |||||||||||  || |||||||||||   ||||||||||||| |||||||    
T  5439700 atcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtcc 5439623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 4173819 - 4173740
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  4173819 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 4173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 5437857 - 5437924
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||| |||||| |||||||||||  || |||||||||||   ||||||||||||| |||||||    
T  5437857 ttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtcc 5437924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 27624806 - 27624897
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    ||||||||  |||| |||| || ||||||||||||| | || ||  ||| ||  |||||||||||||||||||| ||| |||||||||||||    
T  27624806 gagtgaacggtcaacttcgcccttgaatttttacgggttggtcaaattcatctttcaattatgcgaaatatcaacttagtccctgaatttgt 27624897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 32652104 - 32652191
Alignment:
Q  148 aaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    |||||||||||||||| ||||||||| | || |||||||  |||||||| |||||   |||||||||||  || ||| ||||||||||    
T  32652104 aaccatcaatttcgtcactgaattttcagggttcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttgtt 32652191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 248
Target Start/End: Original strand, 39345574 - 39345669
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||| | ||||| |||||||||||   |||||||||||||    
T  39345574 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaatttacaaaatgtcaatcaa 39345669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 43519434 - 43519513
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  43519434 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43519513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 9590494 - 9590547
Alignment:
Q  327 cagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||||||||||||||||  | ||| |||||||||||||| || ||||||||    
T  9590494 cagggactaatttggccgatggtaaccaaaattttcaaggacgaaattgattga 9590547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 247; Significance: 1e-137; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 143 - 425
Target Start/End: Complemental strand, 28248266 - 28247984
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28248266 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 28248167  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||| | ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28248166 aatcaagttaggcattcagttcaaatggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 28248067  T
Q  343 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28248066 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctcttccttctc 28247984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 143 - 425
Target Start/End: Original strand, 11021533 - 11021815
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11021533 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 11021632  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  11021633 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggccgttaaactctcacatgtcagacgcaacgtaggcagagactaatttggc 11021732  T
Q  343 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  11021733 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaatagctcttcttccccaacggctctcttccttctc 11021815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 42880902 - 42880665
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||||||||||||||||| |||| ||  ||||||||| |||||||||||||||||||||||||| | |||||||||||| ||    
T  42880902 gagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccataaatttgttaaatttc 42880803  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||  |||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42880802 aatcaagttagtccttttgttcaaacggagcgttaacgaggctgatgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 42880703  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    |||| || ||  | ||||| | ||||||| ||||||||    
T  42880702 cgatgataacaaacattttgacggactaaattgattga 42880665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 41708521 - 41708284
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| || ||| ||||||| | |||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41708521 gagtgaatcatcaacttagtctctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtc 41708422  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| |||||||||| | ||||||||  |||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||    
T  41708421 aatcaatttagtccttctggtcaaacgggccgttaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttagc 41708322  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    |||||||  |  | ||||| ||||||||| ||||||||    
T  41708321 cgataattccaaacattttgaaggactaaattgattga 41708284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 41233 - 40997
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| |||||||  |||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  41233 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttattaattgtc 41134  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| |||||||||| ||| ||| ||  |||||||||||||||||||| ||||||||||| ||| |||| ||| ||||| ||||||||||||||||||    
T  41133 aatcaatttagtccttctgttgaaatgggccgttaacggggctgacgtggccgttaacctcttacaagtcatacgtcacgt-ggcagggactaatttggc 41035  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||| ||||||||| ||||||||    
T  41034 cgataataacaaacattttgaaggactaaattgattga 40997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 37418860 - 37418623
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||| | |||||||| |||| |||||||  ||||||| | |||||||| |||||||||| |||||||| |||||||||||||||    
T  37418860 gagtgaatcatcaacttcgtacttgaattttcacgggtcggccaaattcgtcctttaattatgcaaaatatcaatctaatccctaaatttgttaaatgtc 37418761  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||| ||| |||||||| ||||||||||| ||||||| ||| |||||||||||||||||||||||| || ||||||||||||||||||||     
T  37418760 aatcaagttagtcattctgttcaaacagagcgttaacgtggctgacatggccgttaacctctcacatgtcagacggcatgtaggcagggactaatttggt 37418661  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  37418660 cgataataacaaacatttcgaaggactaaattgattga 37418623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 143 - 302
Target Start/End: Original strand, 33193 - 33352
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  33193 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgtgaaatatcaatttaatccctgaatttgttaaatgtc 33292  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacct 302  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||    
T  33293 aatcaagttagtccttttgttcaaacggagcgttaacggggctgacgtggccgttaacct 33352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 42003581 - 42003379
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| ||| || ||||| | |||||||||| ||||| | ||  ||||| | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  42003581 gagtgaatcattaacttcgttcttgaatttttaaggatcagtcaaattcgttcatcaattatgcgaaatatcaatttaatctctgaatttgttaaatgtc 42003482  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||| ||| ||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  42003481 aatcaagttagtcattctgttcacacggagcgttaacagggctgacgtgaccgttaacctctcacatgtcagacgctacgtaggcatggactaatttggc 42003382  T
Q  343 cga 345  Q
    |||    
T  42003381 cga 42003379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 15373979 - 15373742
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| || ||||||||||| | || | |||||||  ||||| |||||||||||||||||||||||||||| |||||||||||||| ||||    
T  15373979 gagtgaatcatcaacttagtccctgaattatcacaggtcggccaaattcgttcctcaattatgcgaaatatcaatttaattcctgaatttgttaattgtc 15373880  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| |||||||||| | |||||| |  |||||||| ||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  15373879 aatcaatttagtccttctggtcaaacaggccgttaacgaggctggcgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 15373780  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
     ||||||  |  | ||||| ||||||||| ||||||||    
T  15373779 tgataattccaaacattttgaaggactaaattgattga 15373742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 226 - 410
Target Start/End: Complemental strand, 38150023 - 38149841
Alignment:
Q  226 tgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtag 325  Q
    ||||||||| |||||||  |||| || |||| || ||  ||| |||| |||||||| ||||||||||||||||||||||||||||||||| | ||||||     
T  38150023 tgaatttgtaaaatgtccgtcaattttgtccctccgtcaaaatggagggttaacggtgctgacgtggtcgttaacctctcacatgtcagatgtcacgtaa 38149924  T
Q  326 gcagggactaatttggccgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacg 410  Q
    ||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  38149923 gcagggactaagttggccgataatgacctaaattttcaaggac--agttgattgaatttcaggaaattgctcttcttccccaacg 38149841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 39560 - 39645
Alignment:
Q  147 gaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||| |||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  39560 gaaccatcaatttagtccctgaatttttacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 39645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 235 - 380
Target Start/End: Original strand, 11312943 - 11313088
Alignment:
Q  235 taaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggact 334  Q
    |||||||||||||| ||||||| || || |||  |||| |||||||  |||||| | ||||||||||||||||||||| || | ||| ||||||| ||||    
T  11312943 taaatgtcaatcaatttagtccctccgtccaattggagtgttaacgatgctgacatagtcgttaacctctcacatgtctgatgtcacataggcagtgact 11313042  T
Q  335 aatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||||||||||| ||| |||||||||| ||| || ||||||||    
T  11313043 aatttggccgataataaccaaaattttcaaagacgaaattgattga 11313088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 15372499 - 15372588
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||  |||| ||||||||||||| |||||||||||||||||||||||||    
T  15372499 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaattt 15372588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 41706539 - 41706628
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||||||| || |||||||||| |||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  41706539 gagtgaaccatcaatttagttcctgaattttcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41706628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 29909784 - 29909693
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| || ||||||||||||| |||  ||||||| ||| ||||||||||||||||||||||||||||| ||||| |||||||    
T  29909784 gagtgaaccatcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagtcccttaatttgt 29909693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 25619661 - 25619765
Alignment:
Q  144 agtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtca 243  Q
    ||||||||||||| ||||||| |||||||||| || |||| ||  ||| |||||||||||||| ||||||||| ||| ||||||||||||| | |||||     
T  25619661 agtgaaccatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcatatgtcc 25619760  T
Q  244 atcaa 248  Q
    |||||    
T  25619761 atcaa 25619765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 37417273 - 37417364
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||  ||||||| |||||||| | || |||||||  ||| |||||||||||||||||||||||| ||| |||||||||||||    
T  37417273 gagtgaaccatcatattcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 37417364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 42001610 - 42001701
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||| ||||||||||||| | | |||  ||  |||||| ||||||||||||||||||||||||| |||||||||    
T  42001610 gagtgaaccatcaaattcgtccttgaatttttacgggttgtccaaatttatccctctattatgcgaaatatcaatttaatccttgaatttgt 42001701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 298 - 349
Target Start/End: Original strand, 35453 - 35504
Alignment:
Q  298 aacctctcacatgtcagacgccacgtaggcagggactaatttggccgataat 349  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  35453 aacctttcacatgtcagacgccacgtaggcagggactaatttggtcgataat 35504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 39521 - 39430
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| || ||||| ||||||| |||  || |||| ||| || |||||||||||||||||||||| ||| |||||||||||||    
T  39521 gagtgaaccatcaaatttgtccccgaattttcacgcgtcagccaactttgtacctcaattatgcgaaatatcaacttagtccctgaatttgt 39430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 15432328 - 15432419
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||  ||| |||||||||| || |||| ||  ||| |||||||||||||||||||||||||||| || ||||||||||    
T  15432328 gagtgaaccatcaaatttatccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtctctgaatttgt 15432419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 143 - 310
Target Start/End: Complemental strand, 17949018 - 17948851
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||| |||||||  | | ||| ||||   |||||||  |||| ||||||||||||||||  ||| ||||||||| |||||||    
T  17949018 gagtgaatcatcaacttcgtccatgaatttgcaagcatcagccaaaatcgtccccaaattttgcgaaatatcaatttcgtccttgaatttgtaaaatgtc 17948919  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatg 310  Q
    |||||| || |||||||   | ||  || | |||||| | |||||||||| |||||||||||||||||    
T  17948918 aatcaatttcgtccttccaattaactggggtgttaacagagctgacgtggccgttaacctctcacatg 17948851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 28246663 - 28246755
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    ||||||||||||||||||||||||||||||||| || |||||||  ||||||||  ||||   |||||||||||  || | ||||||||||||    
T  28246663 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagttcctgaatttgtt 28246755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 92470 - 92380
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| || ||||||||||||| ||| ||| | || |||||| |||||||||||||||||||||| ||| ||  |||||||||    
T  92470 gagtgaaccatcaaatt-gtccctgaattttcacgcatcagtcaacttcgtacctcaattatgcgaaatatcaacttagtctttgaatttgt 92380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 11023132 - 11023045
Alignment:
Q  147 gaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    ||||||||||||||||||||||||||| | || |||||||  |||||||| |||||   |||||||||||  || ||||||||||||||    
T  11023132 gaaccatcaatttcgtccctgaattttca-gggtcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtt 11023045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 310
Target Start/End: Complemental strand, 7745363 - 7745196
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||||||||||  ||||||| || | ||| ||||   |||||||  |||| ||||||||||||||||  | | ||||||||| |||||||    
T  7745363 gagtgaatcatcaatttcgtcattgaatttgtaagcatcagccaaaatcgtccccaaattttgcgaaatatcaatttcgttcttgaatttgtaaaatgtc 7745264  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatg 310  Q
    |||||| ||  ||||||   | ||  |  | |||||||| |||||| ||||| |||||||||||||||    
T  7745263 aatcaatttcatccttccaattaactgaggtgttaacggagctgacatggtctttaacctctcacatg 7745196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 16764690 - 16764595
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  16764690 tcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 16764595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 265
Target Start/End: Original strand, 24205634 - 24205720
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttca 265  Q
    ||||||||  ||||||||| |||| | ||||||||||| ||| |||||||||||   ||||||||||||| ||||||| || |||||    
T  24205634 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgttca 24205720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 248
Target Start/End: Original strand, 14387359 - 14387454
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| | ||||||||||| ||| |||||||||||   |||||||||||||    
T  14387359 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 14387454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 16763086 - 16763165
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||| ||||||| ||||||||||   ||||| ||  ||||||||| |||| ||||||||||| ||||| |||||||||||    
T  16763086 tcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 16763165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 37022228 - 37022161
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||   ||||||||||||| |||||||    
T  37022228 ttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 37022161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 368
Target Start/End: Complemental strand, 363586 - 363548
Alignment:
Q  330 ggactaatttggccgataatgacctaaattttcaaggac 368  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  363586 ggactaatttggccgatagtgaccaaaattttcaaggac 363548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 361445 - 361518
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaa 216  Q
    ||||||| |||||| ||||||| |||||||| | | ||||||||   || ||||||||||||| ||||||||||    
T  361445 gagtgaatcatcaacttcgtccttgaattttcatgaatcggccaaaatcatccctcaattatgtgaaatatcaa 361518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 14389192 - 14389139
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||  ||||||||| |||| ||||||||||| ||||| |||||||||||    
T  14389192 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 14389139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 24208150 - 24208097
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||  ||||||||| |||||| ||||||||||| ||| |||||||||||    
T  24208150 atcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 24208097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 38148495 - 38148588
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatc-ggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    |||| |||||||||||||||||||||||||| |  |||| |||||  || ||||| |||||   |||||||||||  || ||||||||||||||    
T  38148495 gagtaaaccatcaatttcgtccctgaattttcagagatcgggccaaatttgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtt 38148588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 380
Target Start/End: Complemental strand, 40099190 - 40099117
Alignment:
Q  307 catgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||||| ||||| || ||||||||||| |||| ||||| ||||  |||||| ||||||| || ||||||||    
T  40099190 catgtcagatgccacataagcagggactaaattggtcgatagtgacaaaaatttccaaggacaaaattgattga 40099117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 17948844 - 17948780
Alignment:
Q  307 catgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaa 371  Q
    |||||||||||||||  | |||||||||||| ||||||||  | ||| | |||||||||||||||    
T  17948844 catgtcagacgccacacaagcagggactaatatggccgattgtaaccaacattttcaaggactaa 17948780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 143 - 425
Target Start/End: Original strand, 40019156 - 40019438
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||  ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40019156 gagtgaatcatcaacttcgtctttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 40019255  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40019256 aatcaagttagtccttcagttcaaacggagcgttaacggggctgtcgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 40019355  T
Q  343 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  40019356 cgataatgatctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggttctcttccttctc 40019438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 143 - 380
Target Start/End: Original strand, 33748332 - 33748569
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| ||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  33748332 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaattcctgaatttgttaaatgtc 33748431  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  33748432 aatcaagttagtccttatgttcgaacggagcgttaacggggctgacgtggtcgttaacctttcacatgtcagacgccacgtaggcagagactaatttggc 33748531  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  33748532 cgataataacaaacatttcgaaggactaaattgattga 33748569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 151 - 380
Target Start/End: Complemental strand, 31823559 - 31823330
Alignment:
Q  151 catcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagt 250  Q
    |||||| |||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31823559 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgttaaatgtcaatcaagt 31823460  T
Q  251 tagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatg 350  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||     
T  31823459 tagtccttatgttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggtagggactaatttggttgataata 31823360  T
Q  351 acctaaattttcaaggactaagttgattga 380  Q
    ||  | ||||  ||||||||| ||||||||    
T  31823359 acaaacatttcgaaggactaaattgattga 31823330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 188 - 380
Target Start/End: Complemental strand, 1322360 - 1322168
Alignment:
Q  188 cttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctga 287  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  1322360 cttcgtccctcaattatgcaaaatatcaatttaatccctgaatttgttaaatatcaatcaagttagtcattctgttcaaacggagcgttaacggggctga 1322261  T
Q  288 cgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||| ||  | ||||| ||||||||| ||||||||    
T  1322260 cgtggtcgttaacctctcacatgtcaggcgccacataggcaaggactaatttggccgataataacaaacattttgaaggactaaattgattga 1322168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 32824362 - 32824125
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| || ||  ||||||||| |||| |||||||  || |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32824362 gagtgaatcatcaactttgtttctgaattttcacgggtcggccaaattagtccctcaattatgcgaaatatcaatttaatcactgaatttgttaaatgtc 32824263  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||| ||||| ||||||||||||||||||||||| |||||||  || |||||||||||||||||||||||||||||| |||||||||||||||    
T  32824262 aatcaagttagcccttctgttcaaacggagcgttaacggggttgacgtgaccgctaacctctcacatgtcagacgccacgtaggtagggactaatttggc 32824163  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  32824162 cgataataacaaacatttcgaaggactaaattgattga 32824125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 158 - 344
Target Start/End: Original strand, 24526911 - 24527097
Alignment:
Q  158 ttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcct 257  Q
    |||||||||||||||  |||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24526911 ttcgtccctgaatttacacgggtcggccaacttcgtccctcaattatgtgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcct 24527010  T
Q  258 tcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccg 344  Q
    || |||||||||||||||||||||||||  ||||  ||||||||||||||||||||| |||||||||| ||  || |||||||||||    
T  24527011 tctgttcaaacggagcgttaacggggctatcgtgaccgttaacctctcacatgtcaggcgccacgtagacatagagtaatttggccg 24527097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 143 - 349
Target Start/End: Original strand, 31199485 - 31199691
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| || ||||||||||| | |||| |||||||  ||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||    
T  31199485 gagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtcccttaattatgagaaatatcaatttaatccctgaatttgttaattgtc 31199584  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| |||||||||| | ||||||||  |||||||||||||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  31199585 aatcaatttagtccttctggtcaaacgggccgttaacggggctgacgtggacgttaacatcttacatgtcatacgccacgtaggcagggactaatttggc 31199684  T
Q  343 cgataat 349  Q
    |||||||    
T  31199685 cgataat 31199691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 9876653 - 9876416
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| || ||  ||||||||| || ||||||  | |||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  9876653 gagtgaatcatcaactttgtttctgaattttcactgatcggttaacttcatcccttaattatgcaaaatatcaatttaatacctgaatttgttaaatgtc 9876554  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||||| |||||| |||||||| |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||| || |||||||||||||    
T  9876553 aatcaagttaatccttctgttcaaacagagctttaacggggctgacgtggccgttaaccactcacatgtcagacgccacgtagacatggactaatttggc 9876454  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||| ||||||||| ||||||||    
T  9876453 cgataataacaaacattttgaaggactaaattgattga 9876416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 197 - 348
Target Start/End: Original strand, 33158710 - 33158861
Alignment:
Q  197 tcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgt 296  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| | |||||||||||||||||||||| |||    
T  33158710 tcaattatgcgaaatatcaatttaatccttgaatttgttaaatgtcaattaagttagtccttctgttcaaaggaagcgttaacggggctgacgtggccgt 33158809  T
Q  297 taacctctcacatgtcagacgccacgtaggcagggactaatttggccgataa 348  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  33158810 taacctctcacatgtcagacaccacgtaggcagagactaatttggccgataa 33158861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 143 - 349
Target Start/End: Original strand, 33368759 - 33368965
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||  |||||||||||| ||||| |   ||| || ||||||||||||||||||||||||||||| |||||||||||||||||    
T  33368759 gagtgaatcatcaaattcgtctttgaatttttacgaatcggtcgaattcatctctcaattatgcgaaatatcaatttaatccttgaatttgttaaatgtc 33368858  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| |||||| | |||| |||| || |||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  33368859 aatcaagttagtccttctgttcaaccagagcattaatggtgctgacgtggccgttaacctctcacatgtcagacgccacgtagacaatgactaatttggc 33368958  T
Q  343 cgataat 349  Q
    |||||||    
T  33368959 cgataat 33368965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 37524873 - 37525063
Alignment:
Q  158 ttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcct 257  Q
    ||||||| ||||||||||||| |||| ||  ||| ||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  37524873 ttcgtccttgaatttttacgggtcggtcaaattcatcccttaattatgtgaaatatcaatctaatctctgaatttgttaaatgtcaatcaagttagtcct 37524972  T
Q  258 tcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataa 348  Q
    || ||||||||||||| |||| ||| ||||||||  |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  37524973 tctgttcaaacggagcattaatgggactgacgtgaccgttaacctctcacatgtcagacgtcacgttggcagggactaatttggccgataa 37525063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 151 - 348
Target Start/End: Original strand, 461184 - 461381
Alignment:
Q  151 catcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagt 250  Q
    |||||| ||||||| |||||||| |||| |||||||  ||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  461184 catcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgtgaaataacaatttaatccctgaatttgttaaatgtcaatcaagt 461283  T
Q  251 tagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataa 348  Q
    ||||||||  |||||||||||| ||||||||||||||| |   |||||||||||||||||||| ||||||| |||||| |||||||||||||| ||||    
T  461284 tagtccttttgttcaaacggagtgttaacggggctgacatcaccgttaacctctcacatgtcatacgccacataggcaaggactaatttggccaataa 461381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 222 - 425
Target Start/End: Original strand, 28432300 - 28432501
Alignment:
Q  222 tccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccac 321  Q
    ||||||||||||| |||||||  |||| || |||| || || ||||  ||| |||||||| ||||||||||||||||||||||||||||||||| | |||    
T  28432300 tccctgaatttgtaaaatgtccgtcaattttgtccctccgtccaaatagagggttaacggtgctgacgtggtcgttaacctctcacatgtcagatgtcac 28432399  T
Q  322 gtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttct 421  Q
    ||| ||||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  28432400 gtaagcagggactaagttggctgataatgacctaaa--ttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaaaggctctcttcct 28432497  T
Q  422 tctc 425  Q
    ||||    
T  28432498 tctc 28432501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 162 - 380
Target Start/End: Complemental strand, 8656057 - 8655841
Alignment:
Q  162 tccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcag 261  Q
    ||||||||| ||||||| |||| ||  ||||||  |||| |||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||| |    
T  8656057 tccctgaatatttacgggtcggtcaaattcgtc--tcaactatgcgaaatatcaatttaatcccagaatttgttaattgtcaatcaatttaatccttctg 8655960  T
Q  262 ttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaatttt 361  Q
    |||||| || |||||||||||||||| |||||| |||||||||||||||||| || ||||||||| |||||||||||||| ||||||| ||  ||||||     
T  8655959 ttcaaatggggcgttaacggggctgatgtggtcattaacctctcacatgtcatacaccacgtaggtagggactaatttggtcgataataacaaaaatttc 8655860  T
Q  362 caaggactaagttgattga 380  Q
     ||||||||| ||||||||    
T  8655859 gaaggactaaattgattga 8655841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 166 - 380
Target Start/End: Original strand, 42894799 - 42895007
Alignment:
Q  166 tgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttca 265  Q
    |||||||| |||| ||| |||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  42894799 tgaattttcacgggtcgaccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttctgttta 42894898  T
Q  266 aacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaag 365  Q
    || |||||||||||| | || |||||| ||||||||||||||||||      ||| | ||||||| |||||||||||||||||| ||  | ||||  |||    
T  42894899 aatggagcgttaacgagactaacgtggccgttaacctctcacatgt------ccatgcaggcaggaactaatttggccgataataacaaacatttcgaag 42894992  T
Q  366 gactaagttgattga 380  Q
    |||||| ||||||||    
T  42894993 gactaaattgattga 42895007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 143 - 349
Target Start/End: Complemental strand, 25373713 - 25373507
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||| ||| |||||||| ||| ||||||||  ||| | |||||||||||||||||||||| ||||| ||||||||||| | | |||    
T  25373713 gagtgaatcatcaagttcatccttgaattttcacgcatcggccaaattcattcctcaattatgcgaaatatcaacttaattcctgaatttgtcagacgtc 25373614  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| ||| || | | |||||||||  | |||||||| ||||||||| |||||||||||||||||| |||| || |||||||||| |    
T  25373613 aatcaagttagtccttctgttaaaccagggcgttaacgatgttgacgtggccgttaacctttcacatgtcagacgccacataggtagagactaatttgtc 25373514  T
Q  343 cgataat 349  Q
    |||||||    
T  25373513 cgataat 25373507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 152 - 380
Target Start/End: Original strand, 25705308 - 25705536
Alignment:
Q  152 atcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagtt 251  Q
    ||||| ||||||| |||||||| ||| ||||| ||    |||| |||||||||| |||||| ||||||||| | ||||||| | ||||||||||||||||    
T  25705308 atcaagttcgtccttgaattttcacgtatcggtcaaaaacgtctctcaattatgggaaataacaatttaattcttgaatttatcaaatgtcaatcaagtt 25705407  T
Q  252 agtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatga 351  Q
    ||||||||  ||||| ||||| ||||| || | ||||||||| |||||||| |||||||||||||||||| |||||| ||||||||||||| |||||| |    
T  25705408 agtccttctattcaaccggagtgttaatggtgttgacgtggttgttaacctttcacatgtcagacgccacataggcatggactaatttggctgataataa 25705507  T
Q  352 cctaaattttcaaggactaagttgattga 380  Q
    |  | ||||  ||||||||| ||||||||    
T  25705508 caaacatttcaaaggactaaattgattga 25705536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 143 - 349
Target Start/End: Complemental strand, 25707392 - 25707186
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||| ||| | |||||||||| ||||||||  ||| |||||||||||||||||||||||| ||||||||||||||||| | | |||    
T  25707392 gagtgaatcatcaagttcatccttaaatttttacgcatcggccaaattcatccctcaattatgcgaaatatcaacttaatccctgaatttgtgagacgtc 25707293  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||||| |||||| ||| ||   | |||||||||  |||||||||  ||||||||| |||||||||||| | ||| |||| || ||||||||||||    
T  25707292 aatcaagttaatccttctgttaaactagggcgttaacgatgctgacgtgaccgttaacctttcacatgtcagatgtcacataggtagagactaatttggc 25707193  T
Q  343 cgataat 349  Q
    |||||||    
T  25707192 cgataat 25707186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 196 - 349
Target Start/End: Original strand, 25370579 - 25370732
Alignment:
Q  196 ctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcg 295  Q
    |||||||||| ||||||  |||||||||||||||||||| ||||||||||||||||||||||||  ||||| | ||| ||||| || | |||||||||||    
T  25370579 ctcaattatgggaaataaaaatttaatccctgaatttgtcaaatgtcaatcaagttagtccttctattcaaccagagtgttaatggtgttgacgtggtcg 25370678  T
Q  296 ttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataat 349  Q
    ||||||| ||||||||||  |||||| |||||||||||||||||| ||||||||    
T  25370679 ttaacctttcacatgtcaagcgccacataggcagggactaatttgaccgataat 25370732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 44353117 - 44353212
Alignment:
Q  39 tgttttggggggagacagaatgaccaatccgttcaccccaaagtgaaattaatgttggattgaaaagtaaaatcggagaatatttttgagacaata 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| |||||||||||||||||||    
T  44353117 tgttttggggggagacagaatgaccaatccgttcaccccaaagtgaaattaatgctagattgaaaagtgaaatcggtgaatatttttgagacaata 44353212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 12515166 - 12515321
Alignment:
Q  225 ctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgta 324  Q
    |||||||||| ||||||||||||| ||||||| || ||||||  |||| |||||||| |||||||||| |||||| ||||||||||||||| | | | ||    
T  12515166 ctgaatttgtaaaatgtcaatcaatttagtccctccgttcaattggagtgttaacggtgctgacgtggccgttaagctctcacatgtcagatgtcgcata 12515265  T
Q  325 ggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
     ||| |||||||||||||||||| ||||| |||||||||||||| || ||||||||    
T  12515266 agcatggactaatttggccgatattgaccaaaattttcaaggacgaaattgattga 12515321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 349
Target Start/End: Original strand, 25356405 - 25356555
Alignment:
Q  199 aattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgtta 298  Q
    ||||||| |||||| ||||||||||| || |||||| |||||||| ||||||||||| |||  ||||| ||||| ||||| || ||| |||||||| |||    
T  25356405 aattatgggaaataacaatttaatccttgtatttgtcaaatgtcactcaagttagtcattctattcaaccggagtgttaatggtgctaacgtggtcatta 25356504  T
Q  299 acctctcacatgtcagacgccacgtaggcagggactaatttggccgataat 349  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||| ||||    
T  25356505 acctttcacatgtcagacgccacataggcagggactaattttgccgttaat 25356555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 31201267 - 31201178
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  31201267 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaattt 31201178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 236 - 349
Target Start/End: Original strand, 38881493 - 38881605
Alignment:
Q  236 aaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggacta 335  Q
    |||||||||||||||||| ||||| |||||| || ||||||||||| |||||||||| ||||||| ||||||||| |||||||||||||||||  |||||    
T  38881493 aaatgtcaatcaagttagcccttctgttcaaccgtagcgttaacggtgctgacgtggccgttaacttctcacatg-cagacgccacgtaggcaatgacta 38881591  T
Q  336 atttggccgataat 349  Q
    |||||| |||||||    
T  38881592 atttggtcgataat 38881605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 38882921 - 38882830
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||| |||||||| ||||||||| ||  ||| ||| |||| ||||||| |||||||||||||||||||||||||    
T  38882921 gagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcatccttcaactatgcgagatatcaatttaatccctgaatttgt 38882830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 42897898 - 42897807
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| | ||||| ||||||||||||| |||||||  ||||||||||||||||| |||||||||| ||| ||| |||||||||    
T  42897898 gagtgaaccatcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgt 42897807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 310
Target Start/End: Complemental strand, 44620760 - 44620593
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||  | | ||||| ||   |||||||  |||| ||| ||||||||||||  ||||||||||||| ||||| |    
T  44620760 gagtgaatcatcaacttcgtccctgaatttgcaagcatcggtcaaaatcgtccccaaattttgcaaaatatcaatttcgtccctgaatttgtaaaatgac 44620661  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatg 310  Q
    |||||| || |||||||   | ||  |||| |||||||| |||||||||| |||||||||||||||||    
T  44620660 aatcaatttcgtccttccaattaactggagtgttaacggagctgacgtggccgttaacctctcacatg 44620593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 248
Target Start/End: Complemental strand, 462494 - 462389
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    |||||||||||||| ||||||  ||||||||||| |||||||||  ||| ||| |||||||||||||||||||| ||| ||| ||||||||| ||| |||    
T  462494 gagtgaaccatcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtc 462395  T
Q  243 aatcaa 248  Q
     |||||    
T  462394 catcaa 462389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 248
Target Start/End: Original strand, 32822361 - 32822466
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||  ||| ||||||||||||   ||||||||| ||| ||||||||||||| | |||||    
T  32822361 gagtgaaccatcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtcagatgtc 32822460  T
Q  243 aatcaa 248  Q
     |||||    
T  32822461 catcaa 32822466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 28433834 - 28433748
Alignment:
Q  149 accatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    ||||||||||||||||||||||||| | ||||||||||  ||||||||||||||   |||||||||||  || ||||||||||||||    
T  28433834 accatcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtt 28433748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 31821418 - 31821507
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||||||| ||||| |||||||||||||||| ||   |||| || ||||||||||||||||||||||||||||| ||| |||| ||||||    
T  31821418 gagtgaacaatcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaattt 31821507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 33750472 - 33750417
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  33750472 atcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgt 33750417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 8654500 - 8654588
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||||||| ||| |||||||||||||  |||| ||  ||||| |||||||||||||||||||| ||||||| | |||||||    
T  8654500 gagtgaaccatcaatttagtctctgaatttttacgagtcggtcaaattcgttcctcaattatgcgaaatatc-atttaattcttgaattt 8654588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 1320617 - 1320708
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| || |||| | |||||| |||| ||||| |  ||| |||||||||||||| ||||||||| ||| |||||||||||||    
T  1320617 gagtgaaccatcaaatttgtccttaaattttcacgggtcggctaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgt 1320708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 9184383 - 9184474
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    ||||||| |||||||||||||| |||||||  ||| ||||||||  |||||| | ||| || |||||||||||| ||| |||||||||||||    
T  9184383 gagtgaatcatcaatttcgtccttgaatttgcacgaatcggccaaattcgtcgcccaactacgcgaaatatcaaattagtccctgaatttgt 9184474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 310
Target Start/End: Complemental strand, 9186736 - 9186569
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| | ||||| |||||||  | ||||| ||||   |||||||  |||||||||||||||||| ||| ||||| ||||||  | |||||    
T  9186736 gagtgaatcatcaactccgtccttgaatttacaaggatcagccaaaatcgtccccaaattatgcgaaatatcaaattagtccctaaatttggcatatgtc 9186637  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatg 310  Q
    |||||| ||||||| || ||||||     | ||||||||   |||||||| |||||||||||||||||    
T  9186636 aatcaatttagtccctccgttcaatttaggtgttaacggtaatgacgtggccgttaacctctcacatg 9186569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 33160272 - 33160181
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||| ||||||||| ||||||| |||||||| || | |||||||  ||| ||||||||||||| |||||||||| ||| || ||||||||||    
T  33160272 gagtaaaccatcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgt 33160181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 37526147 - 37526058
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||||||||||||| ||||||| |||||||| |||  |||| ||  ||| | | |||||||||||||||||||| ||| |||||||||||    
T  37526147 gagtgaaccatcaaattcgtccttgaattttcacgcgtcggtcaaattcattcttcaattatgcgaaatatcaacttagtccctgaattt 37526058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 40020759 - 40020667
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    |||||||||||||||||||||||||||| |||| || || ||||  ||||||||  ||||   |||||||||||  || ||||||||||||||    
T  40020759 gagtgaaccatcaatttcgtccctgaatctttaggggtctgccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtt 40020667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 256
Target Start/End: Complemental strand, 601783 - 601680
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagtta 252  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| | ||||||||||| ||| |||||||||||   ||||||||||||| |||    
T  601783 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatta 601684  T
Q  253 gtcc 256  Q
    ||||    
T  601683 gtcc 601680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 279
Target Start/End: Complemental strand, 23811647 - 23811520
Alignment:
Q  152 atcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagtt 251  Q
    ||||| ||||||||||||||   ||||||||||||  |||||||| ||||| | | |||||||||  || ||| ||||||||| |||||||| |||| ||    
T  23811647 atcaacttcgtccctgaattcgcacggatcggccaaattcgtcccccaattttacaaaatatcaaaatagtccttgaatttgtaaaatgtcagtcaattt 23811548  T
Q  252 agtccttcagttcaaacggagcgttaac 279  Q
     |||| || || |||| |||| ||||||    
T  23811547 cgtccctccgtccaaatggagtgttaac 23811520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 38548910 - 38548831
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||||| |||||||||||||||    
T  38548910 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 38548831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 42943505 - 42943410
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||| ||||| |||||||||||   |||||||||||||    
T  42943505 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaa 42943410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 13106819 - 13106917
Alignment:
Q  158 ttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||| |||||||| |   ||||||||  ||| ||||| |||| ||||||||||||| ||| ||||||||||| | |||| |||||||| |||||||    
T  13106819 ttcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttataaaatttcaatcaaattagtcc 13106917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 15308314 - 15308240
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttag 253  Q
    ||||||||  ||||||||| |||||| ||||||||||| ||| |||||||||||   ||||||||||||| ||||    
T  15308314 atcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattag 15308240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 15488683 - 15488609
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttag 253  Q
    ||||||||  ||||||||| |||||| ||||||||||| ||| |||||||||||   ||||||||||||| ||||    
T  15488683 atcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattag 15488609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 380
Target Start/End: Original strand, 11031603 - 11031676
Alignment:
Q  307 catgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||||| | ||| || |||| ||||||||||||||||| ||||| |||||| |||||||||| || |||||    
T  11031603 catgtcagatgtcacataagcagagactaatttggccgatagtgaccaaaatttccaaggactaaatttattga 11031676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 256
Target Start/End: Original strand, 27404246 - 27404323
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||  ||||||||| |||||| |||||||||||  || ||||| ||||| | ||||||||||||| |||||||    
T  27404246 atcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaatttataaaatgtcaatcaaattagtcc 27404323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 38881429 - 38881502
Alignment:
Q  144 agtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaat 217  Q
    |||||| |||||| ||||||| |||||||| ||| ||| ||||  ||| ||||||||||||||||||| |||||    
T  38881429 agtgaatcatcaaattcgtccttgaattttcacgaatcagccaaattcatccctcaattatgcgaaatgtcaat 38881502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 13282488 - 13282567
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||| ||||| |||||||||||    
T  13282488 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 13282567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 27691164 - 27691243
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  27691164 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 27691243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 29237197 - 29237264
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||   ||||||||||||| |||||||    
T  29237197 ttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 29237264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 256
Target Start/End: Complemental strand, 29239266 - 29239163
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagtta 252  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| | ||||||||||| ||| |||||||||||   |||| |||||||| |||    
T  29239266 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaatttacaaaatatcaatcaaatta 29239167  T
Q  253 gtcc 256  Q
    ||||    
T  29239166 gtcc 29239163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 33707252 - 33707311
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||||| |||| | ||||||||||| ||| ||||||||||| | |||||||||||||    
T  33707252 ttcgtccctgaattttacgaaatatcaaattagtccctgaatttataaaatgtcaatcaa 33707311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 33761115 - 33761174
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  33761115 ttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 33761174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 33762792 - 33762697
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| | ||||||||||| ||| |||||||||||   |||||||||||||    
T  33762792 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 33762697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 35509260 - 35509319
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  35509260 ttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 35509319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 9186543 - 9186489
Alignment:
Q  326 gcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    |||| ||||||||||||||||| ||||| |||||| ||| |||||| ||||||||    
T  9186543 gcagagactaatttggccgatagtgaccaaaatttccaatgactaaattgattga 9186489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 11031484 - 11031542
Alignment:
Q  198 caattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||||||||||||| ||| | ||||| ||||| | ||||||||||| |||||||    
T  11031484 caattatgcgaaatatcaaattagttcctgagtttgtcatatgtcaatcaatttagtcc 11031542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 8608294 - 8608343
Alignment:
Q  199 aattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||||||||| ||| ||||||||||| | |||||||||||||    
T  8608294 aattttgcgaaatatcaaattagtccctgaatttataaaatgtcaatcaa 8608343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 8609895 - 8609842
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||  ||||||||| |||| ||||||||||| ||||| |||||||||||    
T  8609895 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 8609842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 255
Target Start/End: Original strand, 11719526 - 11719559
Alignment:
Q  222 tccctgaatttgttaaatgtcaatcaagttagtc 255  Q
    ||||||||||||||||||||||||||| ||||||    
T  11719526 tccctgaatttgttaaatgtcaatcaaattagtc 11719559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 32679021 - 32678972
Alignment:
Q  85 aattaatgttggattgaaaagtaaaatcggagaatatttttgagacaata 134  Q
    ||||||||||| |||||||||| |||| || ||| |||||||||||||||    
T  32679021 aattaatgttgtattgaaaagtgaaatgggtgaagatttttgagacaata 32678972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 10267861 - 10267921
Alignment:
Q  166 tgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccct 226  Q
    |||||||||||| ||||| ||   |||||| | ||||||||||||||| ||||||||||||    
T  10267861 tgaatttttacgaatcggtcaaaatcgtcctttaattatgcgaaatattaatttaatccct 10267921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 27692916 - 27692824
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaat 245  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||| ||||||||| ||| |||||||||||   ||||||||||    
T  27692916 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaat 27692824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 143 - 425
Target Start/End: Complemental strand, 5784958 - 5784676
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5784958 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 5784859  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  5784858 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtgaccgttaaactctcacatgtcagacgcaacgtaggcagggactaatttggc 5784759  T
Q  343 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  5784758 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaatagctcttcttccccaacggctctcttccttctc 5784676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 143 - 425
Target Start/End: Original strand, 11152545 - 11152827
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| |||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11152545 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgttaaatgtc 11152644  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||||||||||||||||  |||||| |||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11152645 aatcaagttagtccttcagttcaaacggagtattaacgaggctaacgtggccgttaacctctcacatgtcagacgccacgtaggcagagactaatttggc 11152744  T
Q  343 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  11152745 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttacccaacagctctcttccttctc 11152827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 31803791 - 31803554
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31803791 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 31803692  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  31803691 aatcaagttagtccttctgttcaaacggagcgttaacggggctgacgtggccgttaacctttcacatgtcagacgccacgtaggcggggactaatttggc 31803592  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  31803591 cgataataacaaacatttcgaaggactaaattgattga 31803554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 144 - 380
Target Start/End: Original strand, 46636766 - 46637002
Alignment:
Q  144 agtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtca 243  Q
    |||||| |||||| |||||| ||||||||| |||| ||||| | |||||||| ||||||||||||||||||||||||||  |||||||||||||||||||    
T  46636766 agtgaatcatcaacttcgtctctgaattttcacgggtcggctaacttcgtccttcaattatgcgaaatatcaatttaatttctgaatttgttaaatgtca 46636865  T
Q  244 atcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggcc 343  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46636866 atcaagttagtccttctgttcaaacggagcgttaacggggctgacgtggccgttaacctttcacatgtcagacgccacgtaggcagggactaatttggcc 46636965  T
Q  344 gataatgacctaaattttcaaggactaagttgattga 380  Q
    |||||| ||  | ||||| ||||||||| ||||||||    
T  46636966 gataataacaaacattttgaaggactaaattgattga 46637002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 143 - 349
Target Start/End: Original strand, 45379085 - 45379291
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  45379085 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctaaatttgttaaatgtc 45379184  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||    
T  45379185 aatcaagttagtccttctgttcaaacggagcattaacggggttgacgtggccgttaacctctcacatatcaggcgccacgtaggcagggactaatttggc 45379284  T
Q  343 cgataat 349  Q
    |||||||    
T  45379285 cgataat 45379291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 143 - 380
Target Start/End: Original strand, 33679259 - 33679496
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| ||||||||| |||| ||||||||||||| || ||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33679259 gagtgaatcatcaattttgtccatgaatttttacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgttaaatgtc 33679358  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||||||||||||  ||||||||||||||||||  || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  33679359 aatcaagttagtccttctattcaaacggagcgttaacaaggttgacgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttgac 33679458  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  33679459 cgataataacaaacatttcgaaggactaaattgattga 33679496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 42136335 - 42136098
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||| ||| |||||||| ||||||| || |||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  42136335 gagtgaatcatcaacttcgttcctaaatttttatggatcggtcaacttcgtcctttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 42136236  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||| |    
T  42136235 aatcaagttagtccttctgttcaaacggagcgttaacagggctgacgtggtcgttatcctctcacatggcagacgccacgtaggcagagactaatttgac 42136136  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
     |||||| ||  | ||||  ||||||||| ||||||||    
T  42136135 tgataataacaaacatttcgaaggactaaattgattga 42136098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 44159385 - 44159148
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| || |||||| ||  ||||||||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  44159385 gagtgaatcatcaacttcgtccctgaattttcacagatcggtcaatttcgtcccttaattatgcaaaatatcaatttaattcctgaatttgttaaatgtc 44159286  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  44159285 aatcaagttagtcattctgttcaaacgaagcgttaacggggctgacgtgaccgttaacctctcacatgtcaggcgccacgtaggcaatgactaatttggc 44159186  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  44159185 cgataataacaaacatttcgaaggactaaattgattga 44159148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 144 - 349
Target Start/End: Complemental strand, 6577195 - 6576990
Alignment:
Q  144 agtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtca 243  Q
    |||||| |||||| |||||||||||  ||||| || ||||| |  || |||| ||||||||||||||||||||||||||||||||||||  |||||||||    
T  6577195 agtgaatcatcaacttcgtccctgacattttatgggtcggctaaattagtccttcaattatgcgaaatatcaatttaatccctgaatttactaaatgtca 6577096  T
Q  244 atcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggcc 343  Q
    |||||||||| ||||| |||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6577095 atcaagttagcccttctgttcaaacggagcgttaatggggctgacgtggccgttaatctctcacatgtcagacgccacgtaggcagggactaatttggcc 6576996  T
Q  344 gataat 349  Q
    ||||||    
T  6576995 gataat 6576990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 143 - 380
Target Start/End: Original strand, 35478087 - 35478324
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||| |||||||||||| |||| |||||||  || ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  35478087 gagtgaatcatcaacttcatccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaatttaatccctgaatttattaaatgtc 35478186  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||| ||||| |||||||| |||||||||||||||| |||||  ||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  35478187 aatcaagttagcccttctgttcaaacagagcgttaacggggctaacgtgaccgttaacctctcacatgtcagacaccacgtacgtagggactaatttggc 35478286  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  35478287 cgataataacaaacatttcgaaggactaaattgattga 35478324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 143 - 380
Target Start/End: Original strand, 47264124 - 47264361
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    |||||||||||||| || ||||||||||||| |||  |||||||  || |||||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  47264124 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaatttagtccctcaattatgcgaaatttcaatttcatccctgaatttgttaattgtc 47264223  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| |||||||||| | ||||||||   |||||||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  47264224 aatcaatttagtccttctggtcaaacgggctgttaacggtgctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 47264323  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
     ||||||  |  | ||||| ||||||||| ||||||||    
T  47264324 tgataattccaaacattttgaaggactaaattgattga 47264361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 151 - 380
Target Start/End: Complemental strand, 27952583 - 27952354
Alignment:
Q  151 catcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagt 250  Q
    |||||| || ||||||||||| | |||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  27952583 catcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaattgtcaatcaatt 27952484  T
Q  251 tagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatg 350  Q
    ||||||||| | ||||||||  |||||||||||||||||||| ||||||||||| |||||||  |||||||||| ||| |||||||||||||  |||||     
T  27952483 tagtccttctggtcaaacgggccgttaacggggctgacgtggccgttaacctcttacatgtcttacgccacgtatgcatggactaatttggcttataatt 27952384  T
Q  351 acctaaattttcaaggactaagttgattga 380  Q
     |  | ||||| ||||||||| ||||||||    
T  27952383 ccaaacattttgaaggactaaattgattga 27952354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 143 - 279
Target Start/End: Original strand, 18180500 - 18180636
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| | |||| || ||||||||||||| |||  |||||||  ||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18180500 gagtgaatcctcaactttgtccctgaattttcacgactcggccaaattcatccctcaattatgcgaaatatcaatttaattcctgaatttgttaaatgtc 18180599  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaac 279  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  18180600 aatcaaggtagtccttctgttcaaacggagcgttaac 18180636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 33685372 - 33685281
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||||||||||||||||| |||| ||  ||| |||||||||||||||||||||||||||||||  |||||||||    
T  33685372 gagtgaaccatcaaattcgtccctgaatttttacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttaatcattgaatttgt 33685281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 42134482 - 42134573
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||   || |||||||||||||||||||||||| ||| |||||||||||||    
T  42134482 gagtgaaccatcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 42134573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 27940608 - 27940697
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||||||| ||||||||||||| || | | || ||  |||||||||||||||||||||||||||||||||||| |||||||    
T  27940608 gagtgaaccatcaatttagtccctgaattttcacaggttggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaattt 27940697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 143 - 248
Target Start/End: Complemental strand, 47269580 - 47269475
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    |||||||||||||| |||||||||||||||| |||  |||||||  || ||||||||||||| |||||| ||||||| |||||||||||||| ||| |||    
T  47269580 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatacgaaatttcaatttcatccctgaatttgtcaaacgtc 47269481  T
Q  243 aatcaa 248  Q
     |||||    
T  47269480 catcaa 47269475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 349
Target Start/End: Original strand, 18180630 - 18180685
Alignment:
Q  294 cgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataat 349  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18180630 cgttaacctctcacatgtcagacgccacgtagacagggactaatttggccgataat 18180685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 18184067 - 18183976
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||  ||||||||||||| |||||||   || |||||||||||||||||||||||| ||| |||||||||||||    
T  18184067 gagtgaaccatcaaattcgtctttgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 18183976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 380
Target Start/End: Complemental strand, 25173000 - 25172889
Alignment:
Q  269 ggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggac 368  Q
    |||| |||||||| |||||||||  |||||||||||||||||||||| | ||| || |||| |||||||||| |||||| ||||| |||||| |||||||    
T  25173000 ggagtgttaacggtgctgacgtgaccgttaacctctcacatgtcagatgtcacataagcagagactaatttgaccgatagtgaccaaaatttccaaggac 25172901  T
Q  369 taagttgattga 380  Q
     || ||||||||    
T  25172900 gaatttgattga 25172889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 35480099 - 35480008
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||| |||||||| ||||||| ||||  ||| |||||||||||||||||||||||| ||||||  |||||||||    
T  35480099 gagtgaaccatcaacttcgtccttgaattttcacggatcagccaaattcatccctcaattatgcgaaatatcaacttaatctatgaatttgt 35480008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 36895634 - 36895543
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| || ||||||||||||| |||  |||| || |||||||| |||||||||||||||||||| ||| |||||||||||||    
T  36895634 gagtgaaccatcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgt 36895543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 46638931 - 46638840
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||| |||||||||| |||  ||||||| |||| |||||||||||||||||||||||| ||| ||| |||||||||    
T  46638931 gagtgaaccatcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattatgcgaaatatcaacttagtccttgaatttgt 46638840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 44157433 - 44157526
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtta 236  Q
    ||||||||||||||  |||||| | |||||| |||| |||||||  ||| |||||||||||||| ||||||||| ||| |||||||||||||||    
T  44157433 gagtgaaccatcaaactcgtccttaaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtta 44157526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 199 - 310
Target Start/End: Complemental strand, 51123590 - 51123479
Alignment:
Q  199 aattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgtta 298  Q
    |||| ||||||||||||||||  ||||||||||| | ||||||||||||| || |||||||   | ||  || | |||||||| |||||||||| |||||    
T  51123590 aattttgcgaaatatcaatttcgtccctgaatttataaaatgtcaatcaatttcgtccttccaattaactggggtgttaacggagctgacgtggccgtta 51123491  T
Q  299 acctctcacatg 310  Q
    ||||||||||||    
T  51123490 acctctcacatg 51123479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 5783364 - 5783456
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtt 235  Q
    ||||||||||||||||||||||||||||||||| || |||||||  ||| || | |||||   |||||||||||  || ||||||||||||||    
T  5783364 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcatctcccaatttaacgaaatatcaaaatagtccctgaatttgtt 5783456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 36894830 - 36894890
Alignment:
Q  151 catcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaat 211  Q
    |||||| ||||||||||||||||||||| ||||||| |||||||  |||||||||||||||    
T  36894830 catcaacttcgtccctgaatttttacgggtcggccaacttcgtcattcaattatgcgaaat 36894890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 26223633 - 26223700
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||| |||| ||||||||||||| ||| |||||||||||   ||||||||||||| |||||||    
T  26223633 ttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 26223700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 31801633 - 31801724
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||| ||| ||||| ||||||||| |||||| ||   |||| || ||||||||||||||||||||||||||||| ||| ||| | |||||||    
T  31801633 gagtaaacaatcaaattcgtccctaaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtccttaaatttgt 31801724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 158 - 291
Target Start/End: Complemental strand, 34041904 - 34041771
Alignment:
Q  158 ttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcct 257  Q
    |||||||||||||||  ||| || | |||  ||||||||||||||   ||||  |||||  || ||||||||||||| |||||||||| || |||||||     
T  34041904 ttcgtccctgaatttgcacgaatggaccaaattcgtccctcaatttaacgaataatcaaaatagtccctgaatttgtaaaatgtcaataaatttagtcca 34041805  T
Q  258 tcagttcaaacggagcgttaacggggctgacgtg 291  Q
    || || |||  |||| |||||||| |||||||||    
T  34041804 tctgtccaattggagtgttaacggtgctgacgtg 34041771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 310
Target Start/End: Complemental strand, 43870327 - 43870238
Alignment:
Q  221 atccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatg 310  Q
    |||||||||||||| | || |||||||| |||||||||  || ||   || |||||||||| | |||||||| |||||||||||||||||    
T  43870327 atccctgaatttgtcatatctcaatcaaattagtccttacgtccatttggggcgttaacggtgatgacgtggccgttaacctctcacatg 43870238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 46582046 - 46582115
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||||  ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  46582046 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 46582115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 9120085 - 9120152
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||   ||||||||||||| |||||||    
T  9120085 ttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 9120152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 27089322 - 27089252
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttc 259  Q
    ||||||| | |||| || |||||||||| |||||||||||||||   ||||||||||||| | ||||||||    
T  27089322 ttcgtccttgaattttgtgaaatatcaaattaatccctgaatttacaaaatgtcaatcaaatcagtccttc 27089252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 143 - 425
Target Start/End: Original strand, 42619289 - 42619571
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| |||| ||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42619289 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgttaaatgtc 42619388  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||||||||||||||||  ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42619389 aatcaagttagtccttcagttcaaacggagtattaacggggctaacgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 42619488  T
Q  343 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  42619489 cgataatgacctaaattttcaaggactaagttgattgaatttcaggaaattgctcttctttcccaacggctctcttccttctc 42619571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 32090016 - 32089779
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32090016 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 32089917  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32089916 aatcaagttagtccttatgttcaaacggagcgttaacggggctgacgcggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 32089817  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||| ||||||||| ||||||||    
T  32089816 cgataataacaaacattttgaaggactaaattgattga 32089779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 151 - 380
Target Start/End: Complemental strand, 33257843 - 33257614
Alignment:
Q  151 catcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagt 250  Q
    |||||| ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33257843 catcaacttcgtccctgaatttttacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagt 33257744  T
Q  251 tagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatg 350  Q
    ||||||||| |||||||||||||||||||  ||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||     
T  33257743 tagtccttctgttcaaacggagcgttaacaaggctgacgtggccgttaacctctcgcatgtcagacgctacgtaggcagggactaatttggccgataata 33257644  T
Q  351 acctaaattttcaaggactaagttgattga 380  Q
    ||  | ||||  ||||||||| ||||||||    
T  33257643 acaaacatttctaaggactaaattgattga 33257614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 143 - 349
Target Start/End: Complemental strand, 40330606 - 40330400
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| |||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  40330606 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaaatcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtg 40330507  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  40330506 aatcaagttagtccttctgttcaaacggagcgttaacggtgctgacgtggccgtcaacctctcacatgtcagacgccacgtaggcagagactaatttggc 40330407  T
Q  343 cgataat 349  Q
    |||||||    
T  40330406 cgataat 40330400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 143 - 380
Target Start/End: Original strand, 18726565 - 18726799
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||||||||||||||||| |   ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  18726565 gagtgaatcatcaacttcgtccctgaatttttacgggttccccaacttcgtccctcaattatgcgaaatatcaatttagtcccttaatttgttaaatgtc 18726664  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |    
T  18726665 aatcaagttagtcct---gttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttaac 18726761  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||| ||||||||| ||||||||    
T  18726762 cgataataacaaacattttgaaggactaaattgattga 18726799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 143 - 349
Target Start/End: Original strand, 32835876 - 32836082
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| |||| ||  ||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  32835876 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttattaaatgtc 32835975  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32835976 aatcaagttagtccttcggttcaaacagaacgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgtaggcatggactaatttggc 32836075  T
Q  343 cgataat 349  Q
    |||||||    
T  32836076 cgataat 32836082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 143 - 380
Target Start/End: Original strand, 35291048 - 35291285
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| ||||||| ||||||||||||||| |||| |||||||  ||| |||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  35291048 gagtgaatcatcaatgtcgtccctgaattttcacggttcggccaaattcatccctcaactatgtgaaatatcaatttaatccctgaatttgttaaatgtc 35291147  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||| ||| ||| ||||||||||||||||    
T  35291148 aatcaagttagtccttctgttcaaatggagcgttaacggagctgacgtggccgttaacctctcacatgtcagacgacacatagacagggactaatttggc 35291247  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||| |||||||||  |||||||    
T  35291248 cgataataacaaacattttgaaggactaaactgattga 35291285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 158 - 380
Target Start/End: Original strand, 38176647 - 38176869
Alignment:
Q  158 ttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcct 257  Q
    |||||||||||||||| | || | |||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  38176647 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatatcaatcaagttactcct 38176746  T
Q  258 tcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaa 357  Q
    || |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | |    
T  38176747 tctgttcaaacggagtgttaacggggctgacgtgaccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataataacaaaca 38176846  T
Q  358 ttttcaaggactaagttgattga 380  Q
    |||  ||||||||| ||||||||    
T  38176847 tttcgaaggactaaattgattga 38176869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 158 - 380
Target Start/End: Original strand, 38203871 - 38204093
Alignment:
Q  158 ttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcct 257  Q
    |||||||||||||||| | || | |||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  38203871 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatatcaatcaagttactcct 38203970  T
Q  258 tcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaa 357  Q
    || |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | |    
T  38203971 tctgttcaaacggagtgttaacggggctgacgtgaccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataataacaaaca 38204070  T
Q  358 ttttcaaggactaagttgattga 380  Q
    |||  ||||||||| ||||||||    
T  38204071 tttcgaaggactaaattgattga 38204093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 197 - 380
Target Start/End: Original strand, 43316834 - 43317017
Alignment:
Q  197 tcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgt 296  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||  |||    
T  43316834 tcaactatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttctgttcaaacggagcgttaacggagctgacgtgaccgt 43316933  T
Q  297 taacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||  | ||||| |||||||||  |||||||    
T  43316934 taacctctcacatgtcagacgccacataaacagggactaatttggccgataataacaaacattttgaaggactaaactgattga 43317017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 151 - 348
Target Start/End: Original strand, 24232159 - 24232357
Alignment:
Q  151 catcaatttcgtccctgaattttt-acggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaag 249  Q
    |||||| ||||||| ||||||||| | |||||||| |  ||| | ||||||||||| ||||||||||| ||||  |||||||||||||||||||||||||    
T  24232159 catcaacttcgtccttgaattttttatggatcggcaaaattcattcctcaattatgtgaaatatcaatctaatttctgaatttgttaaatgtcaatcaag 24232258  T
Q  250 ttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataa 348  Q
    ||||| |||| ||||||||  ||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  24232259 ttagtacttctgttcaaacaaagcattaacggggttgacgtggccgttaacctctcacatgtcagacgccacgtaagcatggactaatttggccgataa 24232357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 143 - 337
Target Start/End: Complemental strand, 1344905 - 1344711
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| ||||||||||||||||||||||  | | ||||| ||  || ||||| ||||| | |||||||||||  || ||| ||||||||| |||||||    
T  1344905 gagtgaatcatcaatttcgtccctgaatttgcatgaatcggtcaaatttgtcccccaattttacgaaatatcaaaatagtccttgaatttgtaaaatgtc 1344806  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaat 337  Q
    |||||| ||||||| || || |||| |||  |||||| |  || |||||| |||||||||||||||||||||| ||||| || ||||||||||||    
T  1344805 aatcaatttagtccctccgtccaaatggaatgttaaccgtacttacgtggccgttaacctctcacatgtcagatgccacataagcagggactaat 1344711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 38596868 - 38596961
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtta 236  Q
    |||||||||||||| ||||||| |||||||||| || |||||||  |||||||||||||||||||||||||||| ||| |||||||||||||||    
T  38596868 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtta 38596961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 35395333 - 35395426
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgtta 236  Q
    |||||||||||||| ||| |||||||||||| ||   ||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||    
T  35395333 gagtgaaccatcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgtta 35395426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 18728726 - 18728635
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| |||||||||||||||| ||   ||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||    
T  18728726 gagtgaaccatcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgt 18728635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 33256400 - 33256491
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| |||||||||||||||||||   ||||||| |||| ||| |||||||||||||||||||| ||||||  |||||||||    
T  33256400 gagtgaaccatcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaacttaatctttgaatttgt 33256491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 43318184 - 43318093
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||| |||||||||| || |||||||   || |||||||||||||||||||||||| ||| |||||||||||||    
T  43318184 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgt 43318093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 32087514 - 32087603
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||||||||||||| |||||||||||||||| |||  |||  || |||||||||| |||||||||||||||||| ||| ||||| |||||    
T  32087514 gagtgaaccatcaaattcgtccctgaattttcacgcgtcgatcaacttcgtcccttaattatgcgaaatatcaacttagtcccttaattt 32087603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 35292505 - 35292415
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||| |||||||||| || | |||||   || ||| |||||||||||||||||||| ||| |||||||||||||    
T  35292505 gagtgaaccatcaaattcgtccttgaatttttatgggt-ggccaaaatcatccttcaattatgcgaaatatcaacttagtccctgaatttgt 35292415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 38178217 - 38178126
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||| ||||| ||||||| | |||||| |||| |||| ||  ||| |||||||||||||||||||||||||||| |  ||||||||||    
T  38178217 gagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgt 38178126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 38205441 - 38205350
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||| ||||| ||||||| | |||||| |||| |||| ||  ||| |||||||||||||||||||||||||||| |  ||||||||||    
T  38205441 gagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgt 38205350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 24498158 - 24498045
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| ||| || ||||||| |||||||  | ||||||| ||   || |||||||||||||||| | ||||| ||| ||||||||||||| | |||||    
T  24498158 gagtgaatcattaacttcgtccgtgaatttgcaaggatcggtcaaaatcatccctcaattatgcgataaatcaaattagtccctgaatttgtcatatgtc 24498059  T
Q  243 aatcaagttagtcc 256  Q
    |||||| |||||||    
T  24498058 aatcaatttagtcc 24498045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 321
Target Start/End: Original strand, 1343304 - 1343399
Alignment:
Q  226 tgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccac 321  Q
    ||||||||| |||| |||||||| ||||||| || || |||| |||| |||||||| |||||  |||  || |||||||||||||||||| |||||    
T  1343304 tgaatttgtaaaatatcaatcaatttagtccctccgtccaaatggagtgttaacggtgctgatatggctgtcaacctctcacatgtcagatgccac 1343399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 24496755 - 24496834
Alignment:
Q  155 aatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    ||||| |||| | ||||| |||| ||||| ||  || |||||||||||||| |||||||||| |||||||||||||||||    
T  24496755 aattttgtccttaaatttgtacgaatcggtcaaatttgtccctcaattatgtgaaatatcaaattaatccctgaatttgt 24496834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 40782264 - 40782187
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||  ||||||||| |||| | ||||||||||| ||| |||||||||||   ||||||||||||| |||||||    
T  40782264 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 40782187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 380
Target Start/End: Original strand, 25509706 - 25509758
Alignment:
Q  328 agggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||||||||||| |||| ||||| |||||||||||||| || ||||||||    
T  25509706 agggactaatttggctgatagtgaccaaaattttcaaggacaaaattgattga 25509758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 7269489 - 7269430
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||||| |||| ||||||||||||| ||| ||||||||||| | |||||| ||||||    
T  7269489 ttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgttaatcaa 7269430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 12738815 - 12738720
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  ||||| ||| |||| ||||||||||| ||||| |||||||||||   |||||||||||||    
T  12738815 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaa 12738720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 12801638 - 12801543
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  ||||| ||| |||| ||||||||||| ||||| |||||||||||   |||||||||||||    
T  12801638 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaa 12801543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 17574328 - 17574407
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||| ||||| |||||||||||    
T  17574328 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 17574407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 8541324 - 8541255
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||||  ||||||||| |||| ||||||||||| ||||| ||| |||||||   |||||||||||||    
T  8541324 atcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatttacaaaatgtcaatcaa 8541255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 380
Target Start/End: Complemental strand, 24497987 - 24497914
Alignment:
Q  307 catgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||| ||| ||||| || |||| ||||||||||||||||| ||| | |||||| ||||||| || ||||||||    
T  24497987 catgttagatgccacataagcagagactaatttggccgatagtgatcaaaatttacaaggaccaaattgattga 24497914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 24541300 - 24541247
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||  ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  24541300 atcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 24541247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 256
Target Start/End: Original strand, 29620174 - 29620251
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||  ||||||||| |||| | ||||||||||| ||| || ||||||||   ||||||||||||| |||||||    
T  29620174 atcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaatttacaaaatgtcaatcaaattagtcc 29620251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 188 - 425
Target Start/End: Original strand, 37865429 - 37865666
Alignment:
Q  188 cttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctga 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37865429 cttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtctttcagttcaaacggagcgttaacggggctga 37865528  T
Q  288 cgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattgaatttcag 387  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37865529 cgtggccgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattgaatttcag 37865628  T
Q  388 gaaattgctcttcttccccaacggctctctttcttctc 425  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  37865629 gaaattgctcttcttccccaacagctctcttccttctc 37865666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 143 - 380
Target Start/End: Original strand, 45897050 - 45897287
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45897050 gagtgaatcatcaacttcgtccttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 45897149  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||||||| |||| |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45897150 aatcaagttagttcttctgttcaaacggagcgttaacaaggctgacgtggccgttaacctctcacatgtcagacgcaacgtaggcagggactaatttggc 45897249  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  45897250 cgataataacaaacatttcgaaggactaaattgattga 45897287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 143 - 380
Target Start/End: Complemental strand, 48635464 - 48635227
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| ||||||||||||||||||||||| ||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48635464 gagtgaatcatcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 48635365  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48635364 aattaagttagtctttctgttcaaacggagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccatgtaggcagggactaatttggc 48635265  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  48635264 cgataataacaaacatttcgaaggactaaattgattga 48635227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 143 - 349
Target Start/End: Original strand, 23887198 - 23887404
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| ||||||| |||||||||| || ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23887198 gagtgaatcatcaacttcgtccttgaatttttatgggtcggctaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttcaatgtc 23887297  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  23887298 aatcaagttagtccttctgttcaaacggagcgttaacggggctgacgtggccgttaacctttcacatgtcagacgccacgtaggcagggactaatttgac 23887397  T
Q  343 cgataat 349  Q
    |||||||    
T  23887398 cgataat 23887404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 143 - 380
Target Start/End: Original strand, 40508493 - 40508730
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| |||| ||  ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  40508493 gagtgaatcatcaacttcgtccctgaattttcacgggtcggacaaattcgtcccttaattatgcgaaatctcaatttaatccctgaatttgttaaatgtc 40508592  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||     
T  40508593 aatcaagttagtccttctattcaaacagagcgttaacggggctgacgtggccgttaacctctcacatgtcagacgccacgcaggcagggactaatttggt 40508692  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  40508693 cgataataacaaacatttcgaaggactaaattgattga 40508730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 143 - 380
Target Start/End: Original strand, 33850982 - 33851219
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||||||||| |||||||||| |||| |||| || ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  33850982 gagtgaatcatcaatttcgttcctgaattttcacgggtcggtcaacttcgtccctcaattatccgaaatatcaatttaatctctgaatttgttaaatgtc 33851081  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||| ||||| ||||||||||||||||     
T  33851082 aatcaagttagtcattctgttcaaacggagcgttaacggggctgacgtgaccgttaacctctcacatgtcaggcgcaacgtaagcagggactaatttggt 33851181  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||| ||  | ||||  ||||||||| ||||||||    
T  33851182 cgataataacaaacatttcgaaggactaaattgattga 33851219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 143 - 349
Target Start/End: Original strand, 33111841 - 33112047
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||| |||| |||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33111841 gagtgaatcatcaacttcgtccctgaattttcacggctcggtcaaattcatccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 33111940  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||||||||||||||  ||||||||||||||||| || |||||||||  |||||||||||||||||||||||||||||||| || |||||||||||||    
T  33111941 aatcaagttagtccttctattcaaacggagcgttaatggagctgacgtgaccgttaacctctcacatgtcagacgccacgtagacacggactaatttggc 33112040  T
Q  343 cgataat 349  Q
    |||||||    
T  33112041 cgataat 33112047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 146 - 380
Target Start/End: Original strand, 45255486 - 45255720
Alignment:
Q  146 tgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaat 245  Q
    |||| |||||| |||||||||||||||||||||||||| || |||| || ||||||||||| |||||| | |||||||||||||||||||||||||||||    
T  45255486 tgaatcatcaacttcgtccctgaatttttacggatcggtcaacttcatcactcaattatgcaaaatattactttaatccctgaatttgttaaatgtcaat 45255585  T
Q  246 caagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccga 345  Q
    |||||||||||||| ||||||||| ||||||||||||||| |||| | ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  45255586 caagttagtccttctgttcaaacgaagcgttaacggggctaacgtagccgttaacctctcacatgtcaggcgccacgtaggtagggactaatttgaccga 45255685  T
Q  346 taatgacctaaattttcaaggactaagttgattga 380  Q
    |||| ||  | ||||| ||||||||| ||||||||    
T  45255686 taataacaaacattttgaaggactaaattgattga 45255720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 151 - 425
Target Start/End: Complemental strand, 41946182 - 41945908
Alignment:
Q  151 catcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagt 250  Q
    ||||||||| || |||||||||  || |||||| ||  || |||||||||||   |||||||||||  || ||| ||||||||| |||||||  |||| |    
T  41946182 catcaatttggttcctgaatttgcactgatcggtcaaatttgtccctcaatttaacgaaatatcaaaatagtccatgaatttgtaaaatgtccgtcaatt 41946083  T
Q  251 tagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataatg 350  Q
    | |||| || || |||| |||| |||||||| ||||||||||||||||||||||||||||||| | |||||||| |||| |||||| |||||||||||||    
T  41946082 ttgtccctccgtccaaatggagggttaacggtgctgacgtggtcgttaacctctcacatgtcatatgccacgtaagcagagactaagttggccgataatg 41945983  T
Q  351 acctaaattttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctctttcttctc 425  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41945982 acctaatttttcaaggactaagttgattgaatttcaggaaattgctcttcttccccaacggctctcttccttctc 41945908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 143 - 349
Target Start/End: Complemental strand, 1847736 - 1847530
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| || |||| |||||||| |||| |||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1847736 gagtgaatcatcaaatttgtccttgaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaatttaatccctgaatttgttaaatgtc 1847637  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||| |||||||||||||||| || | ||||| ||||||||||||     
T  1847636 aatcaagttagtccttctgttcaaacggagcgttaacggggatgatgtggccgttaacttctcacatgtcagacgtcatgcaggcatggactaatttggt 1847537  T
Q  343 cgataat 349  Q
    |||||||    
T  1847536 cgataat 1847530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 151 - 339
Target Start/End: Original strand, 18428757 - 18428942
Alignment:
Q  151 catcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagt 250  Q
    |||||| ||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  18428757 catcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatctc-gaatttgttaaatgtcaatcaagt 18428855  T
Q  251 tagtccttcagttc-aaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaattt 339  Q
    ||||| ||  |||| |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  18428856 tagtcatt--gttcaaaacggagcgttaacggggctgacgtgaccgttaacctctcacatgtcaggcgccacgtaggca-ggactaattt 18428942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 143 - 352
Target Start/End: Original strand, 2975460 - 2975669
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| || ||| ||||||| |||||||||||||||| || |  ||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  2975460 gagtgaatcaccaaattcgtccttgaatttttacggatcagctaaattcatccctcaatgatgcgaaatatcaatttaatccctgaatttgttaaatttc 2975559  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    ||||||||||||||||| |||| | || | ||||||||| | |||||||| |||||||||||||||||||||||  |||||||||||||| ||||||||     
T  2975560 aatcaagttagtccttctgttcgaccgaaacgttaacggtgttgacgtggccgttaacctctcacatgtcagacatcacgtaggcagggattaatttggt 2975659  T
Q  343 cgataatgac 352  Q
    ||||||||||    
T  2975660 cgataatgac 2975669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 143 - 380
Target Start/End: Original strand, 40998515 - 40998752
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    |||||||||||||| || ||||||||||||| |||  |||| ||  || |||||||||||||||||||| ||| ||| ||||||||||||||||| ||||    
T  40998515 gagtgaaccatcaagttagtccctgaattttcacgcgtcggtcaaattagtccctcaattatgcgaaatttcattttcatccctgaatttgttaattgtc 40998614  T
Q  243 aatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggc 342  Q
    |||||| |||||||||| | ||||||||  | |||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  40998615 aatcaatttagtccttctggtcaaacgggccattaacggggctgacgtggccgttaacctcttacatgtcatacgccacgtaggcagggactaatttggc 40998714  T
Q  343 cgataatgacctaaattttcaaggactaagttgattga 380  Q
     ||||||  |  | ||||| ||||||||| ||||||||    
T  40998715 tgataattccaaacattttgaaggactaaattgattga 40998752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 24381759 - 24381950
Alignment:
Q  158 ttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaat-ttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||| |||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||  ||||| || |||||| |||| |||||||||||    
T  24381759 ttcgtccttgaatttttacggatcggccaaattcatccctcaattatgcgaaatatcaatttaatctttgaatatttttaaatttcaa-caagttagtcc 24381857  T
Q  257 ttcagttcaaacggagcgttaacgg-ggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataa 348  Q
    ||| |||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||    
T  24381858 ttctgttcaaacggagcgttaacggacgctgacgtggtcgttagcctctcacatgtcagacgccacgtagacagtgactgatttggccgataa 24381950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 210 - 341
Target Start/End: Complemental strand, 23775677 - 23775546
Alignment:
Q  210 atatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacat 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||  ||||||||||||| ||    
T  23775677 atatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttctgttcaaacagagcgttaatggggctgacttgaccgttaacctctcatat 23775578  T
Q  310 gtcagacgccacgtaggcagggactaatttgg 341  Q
    ||||||||||||||||||||||||||||||||    
T  23775577 gtcagacgccacgtaggcagggactaatttgg 23775546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 158 - 349
Target Start/End: Original strand, 31885533 - 31885723
Alignment:
Q  158 ttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcct 257  Q
    ||||||| || |||||||||| |||| ||  ||| ||||| |||||||||||||||||||||| | | |||||||| |||||||||||||||||||||||    
T  31885533 ttcgtccttggatttttacgggtcggtcaaattcatcccttaattatgcgaaatatcaatttagtacttgaatttgctaaatgtcaatcaagttagtcct 31885632  T
Q  258 tcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataat 349  Q
    |  |||||||| ||||||||||||||| ||||||| | |||||||||||| ||||||||||||||||||||  ||||||||| || ||||||    
T  31885633 t-tgttcaaacagagcgttaacggggccgacgtggccattaacctctcacgtgtcagacgccacgtaggcaatgactaattttgctgataat 31885723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 23774152 - 23774243
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||| |||||||| |||  |||||||  |||||||||||||||||||||||||||||||| |||||||||||||    
T  23774152 gagtgaaccatcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgt 23774243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 40509035 - 40508944
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||| |||||||| |||| |||||||  |||||||||||||||||||||||||||| ||||||| |||||||||    
T  40509035 gagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgt 40508944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 143 - 248
Target Start/End: Complemental strand, 23888896 - 23888791
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    |||||||||||||| |||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||||  ||| ||||||||||||| ||| |||    
T  23888896 gagtgaaccatcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtc 23888797  T
Q  243 aatcaa 248  Q
     |||||    
T  23888796 catcaa 23888791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 225 - 380
Target Start/End: Original strand, 30501199 - 30501354
Alignment:
Q  225 ctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgta 324  Q
    |||||||||| ||||||||||||| ||||||| || || |||  |||| |||||||| |||||||||  ||| || ||||||||||||||| |||||  |    
T  30501199 ctgaatttgtaaaatgtcaatcaatttagtccctccgtccaattggagtgttaacggtgctgacgtgaccgtcaatctctcacatgtcagatgccacaca 30501298  T
Q  325 ggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
     |||  |||||||||||| |||| ||||| |||||| ||||||| || ||||||||    
T  30501299 agcaaagactaatttggctgatagtgaccaaaatttccaaggacgaaattgattga 30501354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 41021127 - 41021036
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| |||||||||||||||| |||  |||||||  || |||||||||||||||||||| ||||||| ||||||||||||||    
T  41021127 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 41021036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 218 - 291
Target Start/End: Original strand, 51453878 - 51453951
Alignment:
Q  218 ttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtg 291  Q
    ||||||| | |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  51453878 ttaatccttaaatttgttaaatctcaatcaagttagtccttctgttcaaacggagcgttaacggtgctgacgtg 51453951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 48633877 - 48633968
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||| |||||||| |||| |||| ||  ||||||| |||||||||||||||||||| ||| |||||||||||||    
T  48633877 gagtgaaccatcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgt 48633968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 248
Target Start/End: Complemental strand, 31887576 - 31887471
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    |||||||||||||| ||||||| |||||||| ||||||||| ||  |||  || |||||||||||||||||||| ||| ||||||||||||| | |||||    
T  31887576 gagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccctgaatttgtcagatgtc 31887477  T
Q  243 aatcaa 248  Q
     |||||    
T  31887476 tatcaa 31887471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 2977453 - 2977362
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    ||||||| |||||| ||||||| |||||||||||| ||||||||  ||| ||||| |||||||||||||||||||| | ||||| |||||||    
T  2977453 gagtgaatcatcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgt 2977362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 230
Target Start/End: Complemental strand, 18430395 - 18430308
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaat 230  Q
    |||||||||||||| ||||||| |||||||| |||| || ||||  ||| |||||||||||||||||||||||| ||| |||||||||    
T  18430395 gagtgaaccatcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccctgaat 18430308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 33113304 - 33113213
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| || |||| ||||||||||||| |||||||   || |||||||||||||||||||||||| ||| ||||| |||||||    
T  33113304 gagtgaaccatcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctaaatttgt 33113213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 51454374 - 51454283
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||||| |||||||| ||||||||||||  ||| | |||||||||||||||||||||| ||| ||  |||||||||    
T  51454374 gagtgaaccatcaaattcgtccttgaattttcacggatcggccaaattcattcctcaattatgcgaaatatcaaattagtctttgaatttgt 51454283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 33051509 - 33051390
Alignment:
Q  190 tcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacg 289  Q
    |||||||| |||| ||| ||||||||||||  ||||||||||||| ||||||||||||| |||||| | || || ||  || | |||||||| |||||      
T  33051509 tcgtccctaaattttgcaaaatatcaatttcgtccctgaatttgtaaaatgtcaatcaatttagtcttccaatt-aactggggtgttaacggagctgata 33051411  T
Q  290 tggtcgttaacctctcacatg 310  Q
    |||||||||||||||||||||    
T  33051410 tggtcgttaacctctcacatg 33051390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 45898472 - 45898381
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| |||||||||||||||| ||   ||| ||| ||| |||||| |||||||||||||||||| ||| ||| |||||||||    
T  45898472 gagtgaaccatcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgt 45898381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 41944576 - 41944665
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||| |||||||||||||||||||||||||| | ||||||||||  |||||||| |||||   |||||||||||  || |||||||||||    
T  41944576 gagtaaaccatcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaattt 41944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 24383017 - 24382926
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| || |||| ||||||||||||| |||||||  ||| ||| ||||||||| |||||||||| ||| ||| || ||||||    
T  24383017 gagtgaaccatcaaattggtccttgaatttttacgggtcggccaaattcatccttcaattatgagaaatatcaacttagtccatggatttgt 24382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 207 - 380
Target Start/End: Original strand, 26447818 - 26447984
Alignment:
Q  207 gaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctca 306  Q
    ||||||||||  || || |||||||||| ||||||||||||| ||||||  ||  |||||  |||| ||||| || ||||||||||| |||||||| |||    
T  26447818 gaaatatcaaaatagtctctgaatttgtaaaatgtcaatcaatttagtctctccattcaattggagtgttaatggtgctgacgtggttgttaacctttca 26447917  T
Q  307 catgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    |||||       ||| || ||| ||||||||||||| |||| | ||| |||||| ||||||| || ||||||||    
T  26447918 catgt-------cacataagcatggactaatttggctgatagtaaccaaaatttccaaggacgaaattgattga 26447984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 45257344 - 45257253
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| ||||| | |||||||| |||| |||||||  ||| |||||||||||||  ||||||||| ||| | |||||||||||    
T  45257344 gagtgaaccatcaaattcgttcttgaattttcacgggtcggccaaattcatccctcaattatgtaaaatatcaacttagttcctgaatttgt 45257253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 53092669 - 53092728
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||| | |||||||||||||    
T  53092669 ttcgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtcaatcaa 53092728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 206 - 309
Target Start/End: Original strand, 49494539 - 49494643
Alignment:
Q  206 cgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcctt--cagttcaaacggagcgttaacggggctgacgtggtcgttaacctc 303  Q
    |||||||||||||| |||||||||||||| ||||||||||||| || ||||||  || || ||  |||| |||| ||| ||||| |||| ||||||||||    
T  49494539 cgaaatatcaatttcatccctgaatttgtaaaatgtcaatcaattttgtcctttccaatt-aactggagtgttagcggagctgatgtggccgttaacctc 49494637  T
Q  304 tcacat 309  Q
    ||||||    
T  49494638 tcacat 49494643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 38193589 - 38193494
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  38193589 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 38193494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 248
Target Start/End: Original strand, 46308817 - 46308912
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  46308817 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 46308912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 46611346 - 46611287
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||||| |||| ||||||||||||| ||| ||||||||||| | |||||||||||||    
T  46611346 ttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtcaatcaa 46611287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 53094352 - 53094257
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  53094352 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 53094257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 310
Target Start/End: Complemental strand, 5127460 - 5127371
Alignment:
Q  221 atccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatg 310  Q
    |||||||||||||| | || |||||||| |||||||||  || ||   || |||||||||| | |||||||| |||||||||||||||||    
T  5127460 atccctgaatttgtcatatctcaatcaaattagtccttacgtccatttggggcgttaacggtgatgacgtggccgttaacctctcacatg 5127371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 380
Target Start/End: Complemental strand, 17260730 - 17260657
Alignment:
Q  307 catgtcagacgccacgtaggcagggactaatttggccgataatgacctaaattttcaaggactaagttgattga 380  Q
    ||||||||| ||||| || | |||||||||||||| | ||| ||||| |||||||||||||| || ||||||||    
T  17260730 catgtcagatgccacataagtagggactaatttggtcaatagtgaccaaaattttcaaggacgaaattgattga 17260657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 40963489 - 40963376
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtc 242  Q
    ||||||| |||||| |||||||||||||||  | | ||||| ||  ||||| || |||||   |||||||| ||  || ||||||||||||| |||||||    
T  40963489 gagtgaatcatcaacttcgtccctgaatttgcatgaatcggtcaaattcgttccccaatttaacgaaatatgaaaatagtccctgaatttgtaaaatgtc 40963390  T
Q  243 aatcaagttagtcc 256  Q
    |||||| |||||||    
T  40963389 aatcaatttagtcc 40963376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 2226286 - 2226207
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||| ||||| |||||||||||    
T  2226286 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 2226207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 3150298 - 3150357
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  3150298 ttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 3150357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 28626457 - 28626524
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||| |||||| |||||||||||  || |||||||||||   ||||||||||||| |||||||    
T  28626457 ttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtcc 28626524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 30600052 - 30599973
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||| ||||||| | |||||||||  ||||||||  || |||||| |||| ||||||||||| ||||| |||||||||||    
T  30600052 tcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 30599973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 33852744 - 33852705
Alignment:
Q  193 tccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  33852744 tccctcaattatgcgaaatatcaatttaatttctgaattt 33852705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 38191941 - 38192000
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  38191941 ttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 38192000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 39641963 - 39641872
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 234  Q
    |||||||||||||| || |||| ||||||||||||| |||||||  ||| || ||||||||| | || |||||| ||| ||| | |||||||    
T  39641963 gagtgaaccatcaaatttgtccttgaatttttacgggtcggccaaattcatctctcaattattcaaagtatcaacttagtccttaaatttgt 39641872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 41979431 - 41979352
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  41979431 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 46310479 - 46310420
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  46310479 ttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 46310420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 53187788 - 53187847
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  53187788 ttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 53187847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 53190893 - 53190814
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||| ||||| |||||||||||    
T  53190893 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 53190814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 54900153 - 54900058
Alignment:
Q  153 tcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    |||| ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||||| ||  |||||||||||   |||||||||||||    
T  54900153 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatttacaaaatgtcaatcaa 54900058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 23291585 - 23291675
Alignment:
Q  158 ttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||| |||||||| |   ||||||||  ||||||||| |||| ||||||||||| ||||| || ||||||||   |||||||||||||    
T  23291585 ttcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaatcaa 23291675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 46609185 - 46609254
Alignment:
Q  179 atcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||||  ||||||||| |||| || |||||||||| ||| |||||||||||   |||||||||||||    
T  46609185 atcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 46609254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 91; Significance: 6e-44; HSPs: 2)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 199 - 349
Target Start/End: Complemental strand, 2926 - 2776
Alignment:
Q  199 aattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgtta 298  Q
    ||||||| |||||| ||||||||||| ||||||||| |||||||| |||||||||||||||  ||||| ||||| ||||| || ||| ||||||||||||    
T  2926 aattatgagaaataacaatttaatccttgaatttgtcaaatgtcattcaagttagtccttctattcaaccggagtgttaatggtgctaacgtggtcgtta 2827  T
Q  299 acctctcacatgtcagacgccacgtaggcagggactaatttggccgataat 349  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||||||||    
T  2826 acctttcacatgtcagacgccacataggcagtgactaatttggccgataat 2776  T

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Target: scaffold1041; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 166 - 349
Target Start/End: Original strand, 2121 - 2296
Alignment:
Q  166 tgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtccttcagttca 265  Q
    |||||||||||| |||| |||  ||| |||||||||||||||||||||||| ||||||||| ||||||| | | |||||||||||||||| ||  |||      
T  2121 tgaatttttacgcatcgaccaaattcatccctcaattatgcgaaatatcaacttaatccctaaatttgtcagacgtcaatcaagttagtctttttgtt-- 2218  T
Q  266 aacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaatttggccgataat 349  Q
      ||| |||||||||| ||||||||||||||||||    ||||||| ||||||||| ||||||| |||||||||||||||||||    
T  2219 --cggggcgttaacggtgctgacgtggtcgttaac----cacatgttagacgccacataggcagagactaatttggccgataat 2296  T

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Target: scaffold0477 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 6758 - 6669
Alignment:
Q  143 gagtgaaccatcaatttcgtccctgaatttttacggatcggccatcttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 232  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||  ||||||||||||||||| ||||||||||||||||||||||||||    
T  6758 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaattt 6669  T

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Target: scaffold0070 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 240 - 349
Target Start/End: Original strand, 57498 - 57603
Alignment:
Q  240 gtcaatcaagttagtccttcagttcaaacggagcgttaacggggctgacgtggtcgttaacctctcacatgtcagacgccacgtaggcagggactaattt 339  Q
    |||||||||||||||| ||| |||||| ||| |||||||||| ||||||||||||||||||    ||||||| ||||||||| ||||||| |||||||||    
T  57498 gtcaatcaagttagtctttctgttcaatcggggcgttaacggtgctgacgtggtcgttaac----cacatgttagacgccacataggcagagactaattt 57593  T
Q  340 ggccgataat 349  Q
    ||||||||||    
T  57594 ggccgataat 57603  T

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Target: scaffold1712 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 1028 - 1095
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||| |||||| |||||||||||  || |||||||||||   ||||||||||||| |||||||    
T  1028 ttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtcc 1095  T

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Target: scaffold0081 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 54301 - 54234
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaagttagtcc 256  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||   ||||||||||||| |||||||    
T  54301 ttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtcc 54234  T

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Target: scaffold0058 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 14386 - 14327
Alignment:
Q  189 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgttaaatgtcaatcaa 248  Q
    ||||||||| |||| ||||||||||||| ||| |||||||||||   |||||||||||||    
T  14386 ttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaa 14327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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