View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20119_low_14 (Length: 224)
Name: NF20119_low_14
Description: NF20119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20119_low_14 |
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Alignment Details
Target: chr6 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 84 - 200
Target Start/End: Complemental strand, 1987969 - 1987853
Alignment:
| Q |
84 |
tgcatgaaaaggaatatgatgagaatcatgtcaagaaattcaaagaagaaagtggagagtagaaacaatattaaggaatggttcatgtggtgagcaagag |
183 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
1987969 |
tgcatgaaaaggaatatgatgagaatcatgtcaagaaattcaaagaagaaagtggagagtagaaacaaaattaaggaatggttcatgtggtgagcaagag |
1987870 |
T |
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| Q |
184 |
aaacaaaatgaagaaaa |
200 |
Q |
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||||||||||||||||| |
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| T |
1987869 |
aaacaaaatgaagaaaa |
1987853 |
T |
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