View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2011_low_3 (Length: 327)
Name: NF2011_low_3
Description: NF2011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2011_low_3 |
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Alignment Details
Target: chr4 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 19 - 317
Target Start/End: Original strand, 26425327 - 26425625
Alignment:
| Q |
19 |
gtatccaccaactcagacaccatgacattcctcaaacatccaaatttgcaattttaaaaccacaatccacccaacattgcttccatgcgtgaatactttg |
118 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
26425327 |
gtatccaccaactcagacaccatgacattcctcaaacatccaaatttacaattttaaaaccacaatccacccaacattgtttccatgcgtgaatactttg |
26425426 |
T |
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| Q |
119 |
tccatactcaaaatccttcaacttaggccaaagcttagttaaatttttccataagcataaatcattagacttagctatgacattatcaagatcatgggta |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26425427 |
tccatactcaaaatccttcaacttaggccaaagcttagttaaatttttccataagcataaatcattagacttagctatgacattatcaagatcatgggta |
26425526 |
T |
|
| Q |
219 |
acattacggcaatacttaccttgcataacatcacaccataaagccttctcaccacacaaaatcttccatcttattttaataaggcaaagcttggttcat |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
26425527 |
tcattacggcaatacttaccttgcataacatcacaccataaagccttctcaccacacaaaatcttccatcttattttcataaggcaaagcttggttcat |
26425625 |
T |
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