View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20120_high_11 (Length: 268)

Name: NF20120_high_11
Description: NF20120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20120_high_11
NF20120_high_11
[»] chr7 (46 HSPs)
chr7 (6-268)||(9264417-9264682)
chr7 (7-242)||(6257570-6257809)
chr7 (76-268)||(4460796-4460988)
chr7 (9-262)||(19515399-19515655)
chr7 (83-242)||(1462435-1462595)
chr7 (72-262)||(11483904-11484094)
chr7 (8-92)||(48713270-48713357)
chr7 (1-92)||(9194198-9194292)
chr7 (116-262)||(4256651-4256798)
chr7 (73-268)||(4983184-4983379)
chr7 (225-268)||(41722716-41722759)
chr7 (225-268)||(3376530-3376573)
chr7 (225-268)||(8787314-8787357)
chr7 (225-268)||(17206429-17206472)
chr7 (225-268)||(17946738-17946781)
chr7 (225-268)||(38877415-38877458)
chr7 (1-91)||(14941919-14942012)
chr7 (1-91)||(15369512-15369605)
chr7 (1-113)||(10204476-10204590)
chr7 (225-268)||(648819-648862)
chr7 (225-268)||(782809-782852)
chr7 (1-92)||(4313025-4313119)
chr7 (225-268)||(8780441-8780484)
chr7 (9-92)||(9004427-9004513)
chr7 (225-268)||(12561950-12561993)
chr7 (225-268)||(14941762-14941805)
chr7 (225-268)||(15369355-15369398)
chr7 (225-268)||(15707273-15707316)
chr7 (225-268)||(16076861-16076904)
chr7 (225-268)||(33609728-33609771)
chr7 (225-268)||(33612302-33612345)
chr7 (225-268)||(35964254-35964297)
chr7 (225-268)||(48340626-48340669)
chr7 (225-268)||(48355618-48355661)
chr7 (179-217)||(21005644-21005682)
chr7 (1-54)||(21005708-21005761)
chr7 (130-207)||(38877319-38877396)
chr7 (225-268)||(4541171-4541214)
chr7 (229-268)||(5840682-5840721)
chr7 (225-268)||(9004638-9004681)
chr7 (225-268)||(12567645-12567688)
chr7 (225-255)||(4030050-4030080)
chr7 (1-54)||(15707470-15707523)
chr7 (227-268)||(16097448-16097489)
chr7 (1-54)||(25181199-25181252)
chr7 (1-53)||(4307655-4307707)
[»] chr1 (27 HSPs)
chr1 (1-268)||(8648649-8648919)
chr1 (1-268)||(39286653-39286916)
chr1 (7-247)||(30819122-30819366)
chr1 (73-268)||(16384984-16385181)
chr1 (24-193)||(43998257-43998421)
chr1 (72-262)||(16148487-16148678)
chr1 (225-268)||(20899428-20899471)
chr1 (226-268)||(17986584-17986626)
chr1 (225-266)||(25405117-25405158)
chr1 (73-182)||(23298750-23298860)
chr1 (225-268)||(2386235-2386278)
chr1 (73-208)||(20860842-20860977)
chr1 (1-85)||(20412043-20412130)
chr1 (225-262)||(20412278-20412315)
chr1 (231-268)||(30819085-30819122)
chr1 (225-268)||(21792382-21792425)
chr1 (225-268)||(28206395-28206438)
chr1 (225-268)||(41802284-41802327)
chr1 (1-91)||(44538049-44538142)
chr1 (225-268)||(13799484-13799527)
chr1 (225-268)||(21784256-21784299)
chr1 (73-132)||(25405179-25405237)
chr1 (225-268)||(48256325-48256367)
chr1 (226-268)||(17716766-17716808)
chr1 (225-262)||(26134563-26134600)
chr1 (1-53)||(17716537-17716589)
chr1 (1-53)||(52236102-52236154)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-268)||(8889-9158)
[»] scaffold0012 (1 HSPs)
scaffold0012 (9-268)||(49684-49947)
[»] chr6 (48 HSPs)
chr6 (7-262)||(26017708-26017966)
chr6 (7-262)||(26157081-26157339)
chr6 (8-262)||(25507393-25507651)
chr6 (7-262)||(26138462-26138720)
chr6 (1-242)||(5399021-5399265)
chr6 (73-268)||(12660500-12660694)
chr6 (1-252)||(17739415-17739670)
chr6 (84-262)||(29253854-29254032)
chr6 (75-259)||(18396545-18396729)
chr6 (83-262)||(23517382-23517561)
chr6 (79-268)||(12658072-12658254)
chr6 (83-242)||(23574727-23574886)
chr6 (116-262)||(23523983-23524130)
chr6 (116-262)||(25031255-25031402)
chr6 (116-268)||(28734170-28734324)
chr6 (83-212)||(13217402-13217530)
chr6 (225-268)||(17743528-17743571)
chr6 (225-268)||(18233845-18233888)
chr6 (225-268)||(20222916-20222959)
chr6 (225-268)||(22116900-22116943)
chr6 (225-268)||(25949338-25949381)
chr6 (225-268)||(25963938-25963981)
chr6 (225-268)||(25968585-25968628)
chr6 (225-268)||(20221191-20221234)
chr6 (225-268)||(22115175-22115218)
chr6 (225-268)||(31965582-31965625)
chr6 (116-268)||(3923554-3923702)
chr6 (156-268)||(20464317-20464430)
chr6 (225-268)||(18195560-18195603)
chr6 (225-268)||(18844476-18844519)
chr6 (225-268)||(24218730-24218773)
chr6 (225-268)||(25402494-25402537)
chr6 (229-268)||(30245248-30245287)
chr6 (7-113)||(17284234-17284342)
chr6 (227-268)||(18184424-18184465)
chr6 (225-268)||(210173-210216)
chr6 (225-268)||(18448785-18448828)
chr6 (225-268)||(18854634-18854677)
chr6 (7-53)||(23517585-23517631)
chr6 (7-53)||(23574910-23574956)
chr6 (116-204)||(18993097-18993185)
chr6 (229-266)||(26821880-26821917)
chr6 (73-182)||(19612856-19612966)
chr6 (73-109)||(24393070-24393106)
chr6 (1-91)||(25949110-25949204)
chr6 (1-53)||(25963710-25963762)
chr6 (1-53)||(25968357-25968409)
chr6 (1-53)||(32543045-32543097)
[»] chr5 (19 HSPs)
chr5 (1-242)||(20103983-20104229)
chr5 (1-242)||(20738137-20738381)
chr5 (1-260)||(2953576-2953838)
chr5 (116-268)||(16676983-16677136)
chr5 (225-268)||(22942371-22942414)
chr5 (116-204)||(12410430-12410517)
chr5 (225-268)||(20915983-20916026)
chr5 (225-268)||(24166271-24166314)
chr5 (190-268)||(24165229-24165307)
chr5 (226-268)||(24214757-24214799)
chr5 (226-268)||(24220380-24220422)
chr5 (7-91)||(20967561-20967648)
chr5 (225-268)||(15059388-15059431)
chr5 (225-268)||(20169492-20169535)
chr5 (225-268)||(23343576-23343619)
chr5 (1-91)||(23343733-23343825)
chr5 (225-268)||(20967762-20967805)
chr5 (225-268)||(23029612-23029655)
chr5 (1-54)||(15059240-15059293)
[»] chr3 (27 HSPs)
chr3 (73-268)||(13069632-13069827)
chr3 (83-268)||(17023106-17023290)
chr3 (64-217)||(20225344-20225497)
chr3 (83-242)||(22038747-22038896)
chr3 (7-93)||(13601524-13601613)
chr3 (73-266)||(11869871-11870064)
chr3 (225-268)||(8685880-8685923)
chr3 (1-91)||(14495006-14495099)
chr3 (225-268)||(2721945-2721988)
chr3 (225-268)||(34053636-34053679)
chr3 (1-91)||(14660974-14661067)
chr3 (225-268)||(6236874-6236917)
chr3 (225-268)||(11398904-11398947)
chr3 (225-268)||(14494849-14494892)
chr3 (225-268)||(14660816-14660859)
chr3 (225-268)||(14976333-14976376)
chr3 (225-268)||(41545786-41545829)
chr3 (229-268)||(43842100-43842139)
chr3 (225-262)||(17041746-17041783)
chr3 (225-262)||(17050756-17050793)
chr3 (1-54)||(22038670-22038723)
chr3 (225-261)||(19656143-19656179)
chr3 (225-268)||(42244581-42244624)
chr3 (1-53)||(11398676-11398728)
chr3 (216-260)||(20225271-20225315)
chr3 (1-53)||(25054822-25054874)
chr3 (1-53)||(36075982-36076034)
[»] scaffold0264 (1 HSPs)
scaffold0264 (7-242)||(22460-22699)
[»] scaffold0713 (1 HSPs)
scaffold0713 (72-262)||(6738-6930)
[»] chr4 (27 HSPs)
chr4 (7-268)||(38651937-38652200)
chr4 (73-266)||(11922484-11922679)
chr4 (74-268)||(5513673-5513868)
chr4 (73-212)||(12346040-12346180)
chr4 (225-268)||(11889004-11889047)
chr4 (225-266)||(11902651-11902692)
chr4 (225-268)||(31593907-31593950)
chr4 (1-91)||(24125411-24125504)
chr4 (1-92)||(10730939-10731032)
chr4 (1-92)||(10944708-10944801)
chr4 (224-268)||(24125254-24125298)
chr4 (225-268)||(6518380-6518423)
chr4 (225-268)||(16951910-16951953)
chr4 (225-268)||(20059189-20059232)
chr4 (72-182)||(33331118-33331228)
chr4 (232-268)||(3772213-3772249)
chr4 (225-268)||(3355271-3355314)
chr4 (225-268)||(18287006-18287049)
chr4 (225-268)||(21275246-21275289)
chr4 (130-268)||(23793630-23793768)
chr4 (225-268)||(43701599-43701642)
chr4 (1-51)||(3772439-3772489)
chr4 (1-91)||(21275039-21275132)
chr4 (1-42)||(11902867-11902908)
chr4 (1-54)||(45233926-45233979)
chr4 (74-207)||(9487138-9487270)
chr4 (1-53)||(31593679-31593731)
[»] chr8 (20 HSPs)
chr8 (73-262)||(26853930-26854119)
chr8 (83-239)||(21319289-21319445)
chr8 (116-266)||(24341960-24342111)
chr8 (139-266)||(19792265-19792393)
chr8 (1-75)||(9973-10050)
chr8 (225-268)||(25396948-25396991)
chr8 (225-268)||(26012993-26013036)
chr8 (1-91)||(18161807-18161899)
chr8 (76-268)||(24221584-24221778)
chr8 (225-268)||(22904610-22904653)
chr8 (225-268)||(23193990-23194033)
chr8 (9-92)||(24967077-24967163)
chr8 (9-91)||(14351827-14351912)
chr8 (225-268)||(14878323-14878366)
chr8 (225-268)||(18162013-18162056)
chr8 (225-268)||(23221540-23221583)
chr8 (225-268)||(6279740-6279783)
chr8 (225-268)||(14162181-14162224)
chr8 (225-268)||(14351670-14351713)
chr8 (240-268)||(17515842-17515870)
[»] scaffold0213 (1 HSPs)
scaffold0213 (73-262)||(21509-21698)
[»] chr2 (27 HSPs)
chr2 (73-262)||(25337195-25337383)
chr2 (34-238)||(25858695-25858907)
chr2 (73-268)||(15583668-15583865)
chr2 (133-242)||(24366353-24366463)
chr2 (133-231)||(24369087-24369186)
chr2 (225-268)||(20282065-20282108)
chr2 (225-268)||(23340594-23340637)
chr2 (116-268)||(20852025-20852177)
chr2 (225-268)||(16134224-16134267)
chr2 (73-268)||(19124365-19124560)
chr2 (1-91)||(25481185-25481278)
chr2 (1-91)||(25488791-25488884)
chr2 (73-208)||(19013119-19013255)
chr2 (225-268)||(19929398-19929441)
chr2 (225-268)||(24371472-24371515)
chr2 (225-268)||(24820632-24820675)
chr2 (1-54)||(24507118-24507171)
chr2 (225-268)||(24321808-24321852)
chr2 (1-53)||(32441634-32441686)
chr2 (225-268)||(539210-539253)
chr2 (225-268)||(5499806-5499849)
chr2 (225-268)||(24825017-24825060)
chr2 (225-268)||(42767405-42767448)
chr2 (1-91)||(16134381-16134474)
chr2 (9-54)||(44998027-44998072)
chr2 (9-93)||(23140169-23140256)
chr2 (9-93)||(23551959-23552046)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-77)||(44502-44581)
[»] scaffold0031 (5 HSPs)
scaffold0031 (225-268)||(23278-23321)
scaffold0031 (225-268)||(200-243)
scaffold0031 (225-266)||(77852-77893)
scaffold0031 (2-54)||(100177-100229)
scaffold0031 (225-268)||(100383-100426)
[»] scaffold0088 (1 HSPs)
scaffold0088 (167-268)||(38447-38549)
[»] scaffold1559 (1 HSPs)
scaffold1559 (225-268)||(1414-1457)
[»] scaffold1323 (1 HSPs)
scaffold1323 (225-268)||(1939-1982)
[»] scaffold1208 (1 HSPs)
scaffold1208 (225-268)||(1978-2021)
[»] scaffold0447 (2 HSPs)
scaffold0447 (225-268)||(6432-6475)
scaffold0447 (225-268)||(11046-11089)
[»] scaffold0383 (1 HSPs)
scaffold0383 (225-268)||(9041-9084)
[»] scaffold0362 (1 HSPs)
scaffold0362 (229-268)||(9246-9285)
[»] scaffold0123 (1 HSPs)
scaffold0123 (225-268)||(2522-2565)
[»] scaffold0471 (2 HSPs)
scaffold0471 (1-91)||(9999-10092)
scaffold0471 (224-268)||(9842-9886)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-54)||(19762-19815)
[»] scaffold0855 (1 HSPs)
scaffold0855 (225-265)||(3479-3519)
[»] scaffold0847 (1 HSPs)
scaffold0847 (225-265)||(3644-3684)
[»] scaffold0058 (2 HSPs)
scaffold0058 (7-91)||(61657-61744)
scaffold0058 (225-268)||(61858-61901)
[»] scaffold0916 (1 HSPs)
scaffold0916 (225-268)||(3526-3569)
[»] scaffold0371 (1 HSPs)
scaffold0371 (225-268)||(9123-9166)
[»] scaffold0211 (1 HSPs)
scaffold0211 (225-268)||(17678-17721)
[»] scaffold0142 (2 HSPs)
scaffold0142 (225-268)||(21732-21775)
scaffold0142 (225-268)||(26879-26922)
[»] scaffold0138 (2 HSPs)
scaffold0138 (225-268)||(27383-27426)
scaffold0138 (225-268)||(39379-39422)
[»] scaffold0075 (1 HSPs)
scaffold0075 (225-268)||(19444-19487)
[»] scaffold0064 (2 HSPs)
scaffold0064 (225-268)||(48804-48847)
scaffold0064 (7-88)||(48603-48687)
[»] scaffold0018 (1 HSPs)
scaffold0018 (225-268)||(18798-18841)
[»] scaffold0011 (1 HSPs)
scaffold0011 (225-268)||(163948-163991)
[»] scaffold0197 (2 HSPs)
scaffold0197 (1-53)||(9109-9161)
scaffold0197 (231-268)||(8898-8935)
[»] scaffold0096 (2 HSPs)
scaffold0096 (11-91)||(38141-38224)
scaffold0096 (225-266)||(37986-38027)
[»] scaffold0251 (2 HSPs)
scaffold0251 (225-268)||(18977-19020)
scaffold0251 (1-91)||(19133-19226)
[»] scaffold0037 (1 HSPs)
scaffold0037 (225-268)||(48408-48451)
[»] scaffold0026 (1 HSPs)
scaffold0026 (225-268)||(13735-13778)
[»] scaffold0006 (1 HSPs)
scaffold0006 (229-268)||(33972-34011)
[»] scaffold0001 (2 HSPs)
scaffold0001 (225-268)||(425060-425103)
scaffold0001 (225-268)||(82641-82685)
[»] scaffold0014 (1 HSPs)
scaffold0014 (225-266)||(168207-168248)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-53)||(20966-21018)


Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 6 - 268
Target Start/End: Complemental strand, 9264682 - 9264417
Alignment:
Q  6 gcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa---gtggcgcaacccttttacccttttgctgcttttgcttcttcgacaaag 102  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||   |||| |||||||||||||||||||||||||||||||||||||||||||    
T  9264682 gcaaaaatatattgtgcgaagaatttgaatatcttgtgcaaaaatataacaagtggtgcaacccttttacccttttgctgcttttgcttcttcgacaaag 9264583  T
Q  103 ccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatag 202  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9264582 ctgcctattttagtatttctgacctagagcccatggtttcttgtgcaacaatttagtgatttaattcttggggctcaagtcaacgttagactataaatag 9264483  T
Q  203 agcagccatctagttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9264482 agcagccatctagttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 9264417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 7 - 242
Target Start/End: Complemental strand, 6257809 - 6257570
Alignment:
Q  7 caaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa---gtggcgcaacccttttacccttttgctgcttttgcttcttcgacaaagc 103  Q
    ||||||||| |||||| ||||||||||||||||||| |||||||||||   |||||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  6257809 caaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcaccccttttgcccttttcctgcttttgcttcttcgacaaagc 6257710  T
Q  104 cgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaataga 203  Q
     |||||||||||||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||| |||||||||| |||||||||||||| |||||    
T  6257709 tgcctattttagtatttctgacctagtccccatggtttcttgtgcaacactttagtgatttaattcttagggctcaagtaaatgttagactatatataga 6257610  T
Q  204 gcagccatctag-ttgtaaaaccatcttttgttcttggaa 242  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  6257609 gcagccatctagtttgtaaatccatcttttgttcttggaa 6257570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 76 - 268
Target Start/End: Complemental strand, 4460988 - 4460796
Alignment:
Q  76 tttgctgcttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttgggg 175  Q
    |||||||||||||||||| |||||| || |||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||| ||||| |||    
T  4460988 tttgctgcttttgcttctccgacaa-gctgcctattttagtatttctgaactagagcccatggtttcttgtgcaacactttagtgatttagttcttaggg 4460890  T
Q  176 ctcaagtcaatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  4460889 ctcaagtcaatgttagactataaatagagcagtcatctagcttgtataatcatcttttgttcttggaaataataagtgacaattgtttctttga 4460796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 262
Target Start/End: Complemental strand, 19515655 - 19515399
Alignment:
Q  9 aaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaaccc-ttttacccttttgctgcttttgcttcttcgacaaagccg 105  Q
    ||||||| || ||| |||||||||||||||| || ||| |||||  |||||||||   || ||||||||||||| ||||||||||||||||||||||| |    
T  19515655 aaaatatcttatgcaaagaatttgaagatctcgtacaataatatgaaagtggcgcgctccattttacccttttgttgcttttgcttcttcgacaaagctg 19515556  T
Q  106 cctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagc 205  Q
    | |||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19515555 catattttagtatttctggcctagagcccatgatttcttgtgcaacactttagtgattt-attcttggggctcaagtcaatgttagactataaatagagc 19515457  T
Q  206 agccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgttt 262  Q
    | |||||||| |||||||| |||||||||||||| ||| | |  ||||||||||||||    
T  19515456 atccatctagtttgtaaaatcatcttttgttcttagaattcaatagtgacaattgttt 19515399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 83 - 242
Target Start/End: Original strand, 1462435 - 1462595
Alignment:
Q  83 cttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagt 182  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||    
T  1462435 cttttgcttcttcgacaaagctttctattttagtatttctgacctagagcccatggttttttgtgcaacactttagtgatttaattcttggggctcaagt 1462534  T
Q  183 caatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaa 242  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  1462535 caatgttagactataaatagagcagccaactagtttgtaaaaccatcttttgttcttggaa 1462595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 72 - 262
Target Start/End: Complemental strand, 11484094 - 11483904
Alignment:
Q  72 cccttttgctgcttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattctt 171  Q
    |||||||||||||||| |||||||||||| || |||||||||||||||| ||||||| |||||||| |||||| | ||||| |||||||||||| |||||    
T  11484094 cccttttgctgctttttcttcttcgacaa-gctgcctattttagtatttttgacctaaagcccatgatttcttgtacaacactttagtgatttatttctt 11483996  T
Q  172 ggggctcaagtcaatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaat-aataagtgacaattgttt 262  Q
     ||| | |||||| ||||||||||||||||||||| ||||| || ||||| || |||||||||||||||||| | ||||| ||||||||||||    
T  11483995 agggattaagtcattgttagactataaatagagcaaccatcaagattgtataatcatcttttgttcttggaattcaataa-tgacaattgttt 11483904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 48713270 - 48713357
Alignment:
Q  8 aaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat---aagtggcgcaacccttttacccttttgctgcttttgcttc 92  Q
    ||||||||||||| | |||||||||||||||||||||||||||||   ||||| |||| |||||||||||||||||||||| ||||||    
T  48713270 aaaaatatattgttcaaagaatttgaagatcttgtgcaaaaatataacaagtgccgcaccccttttacccttttgctgcttctgcttc 48713357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9194292 - 9194198
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat---aagtggcgcaacccttttacccttttgctgcttttgcttc 92  Q
    ||||| ||||||||| |||||  |||||||||||||||||||||||||||||   |||||||||| ||||||||||||||||| |||| ||||||    
T  9194292 ctcatacaaaaatatcttgtgtaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcaccccttttacccttttgcagcttctgcttc 9194198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 262
Target Start/End: Complemental strand, 4256798 - 4256651
Alignment:
Q  116 tatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagcagccatctag 215  Q
    ||||| ||||||| ||||| | ||||||| ||||||| || ||||||||| ||||| | |||  ||||| ||||||| ||||||||||||||||||| ||    
T  4256798 tatttttgacctaaagcccgtagtttcttgtgcaacacttcagtgatttatttcttagcgctttagtcattgttagattataaatagagcagccatcaag 4256699  T
Q  216 -ttgtaaaaccatcttttgttcttggaaataataagtgacaattgttt 262  Q
     ||||| || ||||||||||||||| || | |  ||||||||||||||    
T  4256698 cttgtataatcatcttttgttcttgaaattcaatagtgacaattgttt 4256651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 268
Target Start/End: Complemental strand, 4983379 - 4983184
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagt--atttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattct 170  Q
    |||||||||| ||||||||||||||||| || |||| ||| |||  |||||||||||| ||||| ||||||||| || |||| | || |||| || ||||    
T  4983379 ccttttgctgtttttgcttcttcgacaa-gctgcctgttt-agtttatttctgacctaaagcccgtggtttcttgtggaacattatattgatgtatttct 4983282  T
Q  171 tggggctcaagtcaatgttagactataaatagagcagccatctagt-tgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||| ||||   ||| || |||||||||||||||| | | |   | |  || ||||||||||||||||||||||||||||||||||||||||||||    
T  4983281 tggggcttaagtagttgt-agcctataaatagagcagctagcaaacatattcaatcatcttttgttcttggaaataataagtgacaattgtttctttga 4983184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 41722716 - 41722759
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  41722716 catcttttgttcttggaaataataagtgacaattgtttctttga 41722759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 3376573 - 3376530
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  3376573 catcttttgttcttggaagtaataagtgacaattgtttctttga 3376530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 8787357 - 8787314
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  8787357 catcttttgttcttgaaaataataagtgacaattgtttctttga 8787314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 17206472 - 17206429
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  17206472 catcttttgttcttggaaataataagtgacaattgtctctttga 17206429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 17946738 - 17946781
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  17946738 catcttttgttcttggaaataataagtgtcaattgtttctttga 17946781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 38877415 - 38877458
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  38877415 catcttttgttcttggaaattataagtgacaattgtttctttga 38877458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14942012 - 14941919
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaaccc-ttttacccttttgctgcttttgctt 91  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| ||| |||||  |||||||||  ||| || ||||||||||||||||||||||    
T  14942012 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataaaagtggcgcgccccattatacccttttgctgcttttgctt 14941919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 15369605 - 15369512
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaaccc-ttttacccttttgctgcttttgctt 91  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| ||| |||||  |||||||||  ||| || ||||||||||||||||||||||    
T  15369605 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataaaagtggcgcgccccattatacccttttgctgcttttgctt 15369512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10204476 - 10204590
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaaccc-ttttacccttttgctgcttttgcttcttcga 97  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| ||| |||||  |||||||||  ||| || ||||||| ||||||||||||||| | ||    
T  10204476 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataaaagtggcgcgccccattatacccttatgctgcttttgcttcataga 10204575  T
Q  98 caaagccgcctatttt 113  Q
    | |||| |||||||||    
T  10204576 c-aagctgcctatttt 10204590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 648862 - 648819
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  648862 catcttttgttctctgaaataataagtgacaattgtttctttga 648819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 782852 - 782809
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  782852 catcttttgttctctgaaataataagtgacaattgtttctttga 782809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4313025 - 4313119
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata--agtggcgcaacccttt-tacccttttgctgcttttgcttc 92  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| |||| |||||  || |||||  ||| || |||||||||||||||||||||||    
T  4313025 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatatacaagaggcgctccccattatacccttttgctgcttttgcttc 4313119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 8780484 - 8780441
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||| | ||||||||||||||    
T  8780484 catcttttgttcttggaaataataagttataattgtttctttga 8780441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 9004427 - 9004513
Alignment:
Q  9 aaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaaccc-ttttacccttttgctgcttttgcttc 92  Q
    ||||||| || ||| ||||||||||||||||||| ||| |||||  |||||||||  ||| || |||||||||||||||||||||||    
T  9004427 aaaatatcttatgcaaagaatttgaagatcttgtacaataatataaaagtggcgcgccccattatacccttttgctgcttttgcttc 9004513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 12561950 - 12561993
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  12561950 catcttttgttctctgaaataataagtgacaattgtttctttga 12561993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 14941805 - 14941762
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  14941805 catcttttgttctctgaaataataagtgacaattgtttctttga 14941762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 15369398 - 15369355
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  15369398 catcttttgttctctgaaataataagtgacaattgtttctttga 15369355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 15707316 - 15707273
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  15707316 catcttttgttctctgaaataataagtgacaattgtttctttga 15707273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 16076904 - 16076861
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  16076904 catcttttgttctctgaaataataagtgacaattgtttctttga 16076861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 33609728 - 33609771
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  33609728 catcttttgttctctgaaataataagtgacaattgtttctttga 33609771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 33612345 - 33612302
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  33612345 catcttttgttctctgaaataataagtgacaattgtttctttga 33612302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 35964297 - 35964254
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  35964297 catcttttgttctctgaaataataagtgacaattgtttctttga 35964254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 48340669 - 48340626
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  48340669 catcttttgttctctgaaataataagtgacaattgtttctttga 48340626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 48355661 - 48355618
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||| ||||||||||||||||||||||| |||||    
T  48355661 catcttttgttctttgaaataataagtgacaattgtttatttga 48355618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 21005682 - 21005644
Alignment:
Q  179 aagtcaatgttagactataaatagagcagccatctagtt 217  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  21005682 aagtcaatgttagactataaatagagcaaccatctagtt 21005644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21005761 - 21005708
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa 54  Q
    ||||| ||||||||| |||||| |||||||||||||||| || |||||||||||    
T  21005761 ctcatacaaaaatatcttgtgcaaagaatttgaagatctcgtacaaaaatataa 21005708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 38877319 - 38877396
Alignment:
Q  130 agcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagcag 207  Q
    ||||||||||||||| || |||| | || |||| |||||||||||||| |||| | | |||| |||||||||||||||    
T  38877319 agcccatggtttcttgtggaacattctattgatgtaattcttggggcttaagttagttttaggctataaatagagcag 38877396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 4541171 - 4541214
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||| |||| || ||||||||||||||||||||||||||||    
T  4541171 catctttcgttcgtgcaaataataagtgacaattgtttctttga 4541214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 5840682 - 5840721
Alignment:
Q  229 ttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  5840682 ttttgttctcggaaataataagtgacaactgtttctttga 5840721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 9004638 - 9004681
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||| ||||||||    
T  9004638 catcttttgttctctgaaataataagtgacaattggttctttga 9004681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 12567645 - 12567688
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||  |||||||| |||||||||||||||||||    
T  12567645 catcttttgttcttttaaataatatgtgacaattgtttctttga 12567688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 255
Target Start/End: Original strand, 4030050 - 4030080
Alignment:
Q  225 catcttttgttcttggaaataataagtgaca 255  Q
    |||||||||||||||||||||||||||||||    
T  4030050 catcttttgttcttggaaataataagtgaca 4030080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15707523 - 15707470
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa 54  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| ||| |||||||    
T  15707523 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa 15707470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 16097489 - 16097448
Alignment:
Q  227 tcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||  ||||||| |||||||||||||||||||||    
T  16097489 tcttttgttctctgaaataagaagtgacaattgtttctttga 16097448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25181252 - 25181199
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa 54  Q
    ||||| ||||||||| |||||  ||||||||||||||||||| ||| |||||||    
T  25181252 ctcatacaaaaatatcttgtgaaaagaatttgaagatcttgtacaataatataa 25181199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4307655 - 4307707
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata 53  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| |||| |||||    
T  4307655 ctcatacaaaaatattatgtgcaaagaatttgaagatcttgtacaaatatata 4307707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 8648649 - 8648919
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa---gtggcgcaacccttttacccttttgctgcttttgcttcttcga 97  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||| |    
T  8648649 ctcatgcaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgacccttttacccttttgctgcttttgcttcttcaa 8648748  T
Q  98 caaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactata 197  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8648749 caaagctgcctattttagtatttatgacctagagcccatggtttcttgtgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactata 8648848  T
Q  198 aatagagcagccatctagttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8648849 aatagagcagccatctagttgtaaaaccatcttttgttcttgaaaataataagtgacaattgtttctttga 8648919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 39286916 - 39286653
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa---gtggcgcaacccttttacccttttgctgcttttgcttcttcga 97  Q
    |||||||||||| ||||||||| ||||||||| |||||||||||||||||||||   ||||||||||||||||        |||||||||||||||||||    
T  39286916 ctcatgcaaaaa-atattgtgcaaagaatttggagatcttgtgcaaaaatataacaagtggcgcaaccctttt--------gctgcttttgcttcttcga 39286826  T
Q  98 caaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaa--tgttagacta 195  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  39286825 caaagctgcctattttagtatttctgacctagagcctatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgtgttagacta 39286726  T
Q  196 taaatagagcagccatctagttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39286725 taaatagagcagccatctagttgtaaaaccatcttttgttcttggaaaaaataagtgacaattgtttctttga 39286653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 247
Target Start/End: Complemental strand, 30819366 - 30819122
Alignment:
Q  7 caaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataag--tggcgcaacccttttac-ccttttgctgcttttgcttcttcgacaaagc 103  Q
    |||||||||||||||| ||||| ||||||||| |   | |||||||||   ||||||  |||||||   ||||||||||||||||||||| |||||| ||    
T  30819366 caaaaatatattgtgcaaagaaattgaagatccttcaccaaaatataaagatggcgcgcccctttttgtccttttgctgcttttgcttctccgacaa-gc 30819268  T
Q  104 cgcctatttt-agtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatag 202  Q
      |||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30819267 tacctatttttagtatttctgacctagagcccatggtttcttgtgcaacattttagtgatttaattcttggggctcaaatcaatgttagactataaatag 30819168  T
Q  203 agcagccatctag-ttgtaaaaccatcttttgttcttggaaataat 247  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||    
T  30819167 agcagccatctagtttgtaaaatcatcttttgttcttagaaataat 30819122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 268
Target Start/End: Complemental strand, 16385181 - 16384984
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagt--atttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattct 170  Q
    |||||||||||||||||||||||||||| ||  ||| ||| |||  |||||||||||| ||||||  ||||||| || |||| | |||||||||| |||     
T  16385181 ccttttgctgcttttgcttcttcgacaa-gcttcctgtttgagtttatttctgacctaaagcccacagtttcttgtgtaacactctagtgatttatttcg 16385083  T
Q  171 tggggctcaagtcaatgttagactataaatagagcagccatcta-gttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    | ||||| |||||||||||||||||||||||||||||||||| |  ||||| || | |||||||||||| ||||| |||||||||||||||||||||||    
T  16385082 tagggcttaagtcaatgttagactataaatagagcagccatcaaccttgtataatcgtcttttgttctttgaaattataagtgacaattgtttctttga 16384984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 43998257 - 43998421
Alignment:
Q  24 aagaatttgaagatcttgtgcaaaaatata---agtggcgcaacccttttacccttttgctgcttttgcttcttcgacaaagccgcctattttagtattt 120  Q
    ||||||||||||||||||||||||||||||   |||||||| |||||||||||||||         ||||||||| ||||| | |||||||||| | |||    
T  43998257 aagaatttgaagatcttgtgcaaaaatatatcaagtggcgcgacccttttacccttt---------tgcttcttcaacaaatctgcctattttaattttt 43998347  T
Q  121 ctgacctagagcccatggtttcttatgcaacaatttagtgatttaattctt-ggggctcaagtcaatgttagac 193  Q
    |||||||| |||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43998348 ctgacctaaagcctatggtttcttgtgcaacaatttagtgatttaattcttgggggctcaagtcaatgttagac 43998421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 72 - 262
Target Start/End: Complemental strand, 16148678 - 16148487
Alignment:
Q  72 cccttttgctgctttt-gcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattct 170  Q
    |||||||||||||||| ||||| | ||||| || |||||||    ||||| ||||||| ||||| ||||||||| ||||| | |||||||||||| ||||    
T  16148678 cccttttgctgctttttgcttcctggacaa-gctgcctattagtttatttttgacctaaagcccgtggtttcttgtgcaatactttagtgatttatttct 16148580  T
Q  171 tggggctcaagtcaatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgttt 262  Q
    | ||||| |||||||||||||||||||||||||||||||||| || ||||| || |||||||||||||  ||| | |  ||||||||||||||    
T  16148579 tagggcttaagtcaatgttagactataaatagagcagccatcaagcttgtataatcatcttttgttctctgaatttaatagtgacaattgttt 16148487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 20899471 - 20899428
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20899471 catcttttgttcttggaaataataagtgacaattgtttctttga 20899428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 17986584 - 17986626
Alignment:
Q  226 atcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17986584 atcttttgttcttggaaataataagtgacaattgtttctttga 17986626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 25405158 - 25405117
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttcttt 266  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25405158 catcttttgttcttggaaataataagtgacaattgtttcttt 25405117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 23298750 - 23298860
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagt--atttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattct 170  Q
    ||||||||||||||||||||| ||| |||||  |||| ||||||  |||||||||||| |||||||||||| || || |||| |||| |||| || ||||    
T  23298750 ccttttgctgcttttgcttctccga-aaagctacctaatttagtttatttctgacctaaagcccatggttttttgtggaacattttattgatgtatttct 23298848  T
Q  171 tggggctcaagt 182  Q
    ||||||| ||||    
T  23298849 tggggcttaagt 23298860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 2386235 - 2386278
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  2386235 catcttttgttctcggaaataataagtgacaattgtttctttga 2386278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 20860977 - 20860842
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagt--atttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattct 170  Q
    |||||| ||||||||||||||||||||| || | || ||| |||  |||||||||||| ||||||||||||||| || |||| |  | |||| || ||||    
T  20860977 ccttttactgcttttgcttcttcgacaa-gctgtctgtttaagtttatttctgacctaaagcccatggtttcttgtggaacattccattgatgtatttct 20860879  T
Q  171 tggggctcaagtcaatgttagactataaatagagcagc 208  Q
    ||||||| |||| | |  ||||||||||||||||||||    
T  20860878 tggggcttaagt-agttgtagactataaatagagcagc 20860842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 20412043 - 20412130
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa---gtggcgcaacccttttacccttttgctgctt 85  Q
    ||||| ||||||||| | |||| ||||| |||||||||||||||||||||||||   |||| ||   |||||||||||||||||||||    
T  20412043 ctcatacaaaaatatctggtgcaaagaaattgaagatcttgtgcaaaaatataacaagtggtgcgctccttttacccttttgctgctt 20412130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 20412278 - 20412315
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgttt 262  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20412278 catcttttgttcttggaaataataagtgacaattgttt 20412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 30819122 - 30819085
Alignment:
Q  231 ttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30819122 ttgttcttggaaataataagtgacaattgtttctttga 30819085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 21792425 - 21792382
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  21792425 catcttttgttctctgaaataataagtgacaattgtttctttga 21792382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 28206438 - 28206395
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  28206438 catcttttgttctcagaaataataagtgacaattgtttctttga 28206395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 41802284 - 41802327
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  41802284 catcttttgttctatgaaataataagtgacaattgtttctttga 41802327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 44538049 - 44538142
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaaccc-ttttacccttttgctgcttttgctt 91  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| ||| |||||  |||||||||  ||| || ||| ||||||||||||||||||    
T  44538049 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataaaagtggcgcgccccattatactcttttgctgcttttgctt 44538142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 13799527 - 13799484
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  ||||||||||||||||||||||| |||||    
T  13799527 catcttttgttctctgaaataataagtgacaattgtttatttga 13799484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 21784299 - 21784256
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||   ||||||||||||||||||||||||||||    
T  21784299 catcttttgttctctaaaataataagtgacaattgtttctttga 21784256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 25405237 - 25405179
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagtatttctgacctagagc 132  Q
    ||||||||| ||||||||||||||| || || | |||||||||||| |||||||||||||    
T  25405237 ccttttgctacttttgcttcttcgataa-gctgtctattttagtatgtctgacctagagc 25405179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 48256325 - 48256367
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  48256325 catcttttgttcttggaa-taataagtaacaattgtttctttga 48256367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 17716766 - 17716808
Alignment:
Q  226 atcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||   ||||||||||||||||||||||||||||    
T  17716766 atcttttgttctctaaaataataagtgacaattgtttctttga 17716808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 262
Target Start/End: Complemental strand, 26134600 - 26134563
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgttt 262  Q
    |||||||||||||  |||||||||||||||||||||||    
T  26134600 catcttttgttctctgaaataataagtgacaattgttt 26134563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17716537 - 17716589
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata 53  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| |||| |||||    
T  17716537 ctcatacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaatatata 17716589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 52236154 - 52236102
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata 53  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| |||| |||||    
T  52236154 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 52236102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 9158 - 8889
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa---gtggcgcaacccttttacccttttgctgcttttgcttcttcga 97  Q
    ||||||||||||| |||||||| ||||||||||| |||||||  ||||||||||   ||||||| |||||||||||||||||||| ||||||||||||||    
T  9158 ctcatgcaaaaatctattgtgcaaagaatttgaacatcttgtcaaaaaatataacaagtggcgcgacccttttacccttttgctg-ttttgcttcttcga 9060  T
Q  98 caaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactata 197  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9059 caaagctgcctattttagtatttctgacctagagcccatggtttcttgtgcaacaatttagtgatttaattctttgggctcaagtcaatgttagactata 8960  T
Q  198 aatagagcagccatctagttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8959 aatagagcagccatctagttgtaaaaccatcttttgttcgtggaaataataagtgacaattgtttctttga 8889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 9 - 268
Target Start/End: Original strand, 49684 - 49947
Alignment:
Q  9 aaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa---gtggcgcaacccttttacccttttgctgcttttgcttcttcgacaaagccg 105  Q
    ||||||| |||||| ||||||||||||||||||| |||||||||||   |||||||  || |||| |||||||||||||||||||||||||||| ||| |    
T  49684 aaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccctttttgcccttttgctgcttttgcttcttcgacatagctg 49783  T
Q  106 cctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagc 205  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  49784 cctattttagtatttctgacctagagcccatggtttcttgtgcaacactttagtgatttaattcttggggttcaagtcaatgttagactataaatagagc 49883  T
Q  206 agccatctagtt-gtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  49884 agtcatctagttagtaaaaccatcttttgttcttggaaataataagtgacaattgttcctttga 49947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 7 - 262
Target Start/End: Original strand, 26017708 - 26017966
Alignment:
Q  7 caaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa---gtggcgcaacccttttacccttttgctgcttttgcttcttcgacaaagc 103  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  26017708 caaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcaccccttttacccttttgctgcttttgtttcttcgacaaagc 26017807  T
Q  104 cgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaataga 203  Q
     ||||||||||||||||| ||||||||||| |||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26017808 tgcctattttagtatttcagacctagagcctatggtttctagtgcaacactttagtgatttaattcttggggctcaagtcaatgttagactataaataga 26017907  T
Q  204 gcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgttt 262  Q
     ||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  26017908 tcagtcatctagtttgtaaaaccatcttttgttctt-gaaataataagtgacaattgttt 26017966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 7 - 262
Target Start/End: Original strand, 26157081 - 26157339
Alignment:
Q  7 caaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa---gtggcgcaacccttttacccttttgctgcttttgcttcttcgacaaagc 103  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  26157081 caaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcaccccttttacccttttgctgcttttgtttcttcgacaaagc 26157180  T
Q  104 cgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaataga 203  Q
     ||||||||||||||||| ||||||||||| |||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26157181 tgcctattttagtatttcagacctagagcctatggtttctagtgcaacactttagtgatttaattcttggggctcaagtcaatgttagactataaataga 26157280  T
Q  204 gcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgttt 262  Q
     ||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  26157281 tcagtcatctagtttgtaaaaccatcttttgttctt-gaaataataagtgacaattgttt 26157339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 262
Target Start/End: Original strand, 25507393 - 25507651
Alignment:
Q  8 aaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa---gtggcgcaacccttttacccttttgctgcttttgcttcttcgacaaagcc 104  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||   ||||| |  | |||||||||||||||||| |||||||||||||||||||     
T  25507393 aaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcacgcctcttttacccttttgctgcatttgcttcttcgacaaagct 25507492  T
Q  105 gcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagag 204  Q
    |||||||||||||||||||||||||| ||||||| ||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25507493 gcctattttagtatttctgacctagaacccatggcttcttgtgcaacactttagtgatttaattcatggggctcaagtcaatgttagactataaatagag 25507592  T
Q  205 cagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgttt 262  Q
    ||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  25507593 cagtcatctagtttgtaaaaccttcttttgttcttggaaataataagtgacaattgttt 25507651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 7 - 262
Target Start/End: Original strand, 26138462 - 26138720
Alignment:
Q  7 caaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa---gtggcgcaacccttttacccttttgctgcttttgcttcttcgacaaagc 103  Q
    ||||||||| |||||| || ||||||||||||||||||||||||||||   ||||||   ||||||||||||||||||||||||||||||||||||||||    
T  26138462 caaaaatatcttgtgcaaataatttgaagatcttgtgcaaaaatataacaagtggcgggccccttttacccttttgctgcttttgcttcttcgacaaagc 26138561  T
Q  104 cgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaataga 203  Q
     ||||||||||||||||| ||||||||||| |||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26138562 tgcctattttagtatttcagacctagagcctatggtttcttgtgcaacactttagtgatttaattcttagggctcaagtcaatgttagactataaataga 26138661  T
Q  204 gcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgttt 262  Q
     ||| |  |||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  26138662 tcagtcccctagtttgtaaaaccatcttttgttctt-gaaataataagtgacaattgttt 26138720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 5399021 - 5399265
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa---gtggcgcaacccttttacccttttgctgcttttgcttcttcga 97  Q
    ||||||||||||||| |||||| || |||||||||||||||| |||||||||||   |||| |   ||||||| ||||||||||||||||||||||| ||    
T  5399021 ctcatgcaaaaatatcttgtgcaaataatttgaagatcttgtacaaaaatataacaagtgg-gtgccccttttgcccttttgctgcttttgcttcttgga 5399119  T
Q  98 caaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactata 197  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  5399120 caaagctgcctattttagtatttctgacctagagcccatggtttcttgtgcaacactttagtgatttaattcttggggctcaagccaatgttagactata 5399219  T
Q  198 aatagagcagccatctag-ttgtaaaaccatcttttgttcttggaa 242  Q
    |||||||||||||||||| |||||||| | | ||||||||||||||    
T  5399220 aatagagcagccatctagtttgtaaaatctttttttgttcttggaa 5399265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 73 - 268
Target Start/End: Complemental strand, 12660694 - 12660500
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttg 172  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||| |||||     
T  12660694 ccttttgctgcttttgcttcttcgacaa-gctgcctattttagtatttctgacctagagcccatggtttcttgtgcaacactttagtga-ttatttctta 12660597  T
Q  173 gggctcaagtcaatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| |||||| ||||||||||||||||||||||||||||    
T  12660596 gggctcaagtcaatgttagactataaatagagcaaccatctagcttgtataatcatctttttttcttgaaaataataagtgacaattgtttctttga 12660500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 17739415 - 17739670
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata--agtggcgcaaccctt-ttacccttttgctgcttttgcttcttcga 97  Q
    ||||| ||||||||| |||||| ||||| ||||||||||||| |  |||||||  |  |||||  ||| | || |||||||||||||||||| |||||||    
T  17739415 ctcatacaaaaatatcttgtgcaaagaaattgaagatcttgtaccgaaatatagcataggcgcgccccatatttcccttttgctgcttttgcctcttcga 17739514  T
Q  98 caaagccgcctattttagtatttctgacctagagcccatggttt-cttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactat 196  Q
    ||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17739515 caa-gctgcctattttagtatttctgacctagagcccatggttttcttgtgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactat 17739613  T
Q  197 aaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtg 252  Q
    ||||| |||||  |||||| |||||||| |||||||||||||| |||||||||||||    
T  17739614 aaataaagcagttatctagtttgtaaaatcatcttttgttcttagaaataataagtg 17739670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 84 - 262
Target Start/End: Original strand, 29253854 - 29254032
Alignment:
Q  84 ttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtc 183  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  29253854 ttttgcttcttcgacaaagctgcctattttagtatttctgacctagagcccatggtttcttgtgcaacactttagtgattt-attcttggggctcaagtc 29253952  T
Q  184 aatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgttt 262  Q
    ||||||| ||||||||||||||||||||| || |||||||| |||||||||||||| ||| | |  ||||||||||||||    
T  29253953 aatgttaaactataaatagagcagccatcgagtttgtaaaaacatcttttgttcttagaattcaatagtgacaattgttt 29254032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 75 - 259
Target Start/End: Complemental strand, 18396729 - 18396545
Alignment:
Q  75 ttttgctgcttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggg 174  Q
    ||||||||||||||| |||||||||  || |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||    
T  18396729 ttttgctgcttttgcctcttcgacag-gctgcctattttagtatttctgacctagagcccatggtttcttgtgcaacactttagtgatttatttcttagg 18396631  T
Q  175 gctcaagtcaatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattg 259  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||| | |  |||||||||||    
T  18396630 gctcaagtcaatgttagactataaatagagcagccatctagcttgtataatcatcttttgttcttggaattcaatagtgacaattg 18396545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 83 - 262
Target Start/End: Complemental strand, 23517561 - 23517382
Alignment:
Q  83 cttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagt 182  Q
    |||||||||||||||||| || |||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||    
T  23517561 cttttgcttcttcgacaa-gctgcctattttagtatttctgaactagagcccatgttttcttgtgcaacactttagtgatttaattcttggggctcaagt 23517463  T
Q  183 caatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgttt 262  Q
    ||||||||||| |||||||||||| |||||||| |||||||| ||| |||||||| ||||| | |  ||||||||||||||    
T  23517462 caatgttagacaataaatagagcaaccatctagtttgtaaaatcatattttgttcatggaattcaatagtgacaattgttt 23517382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 79 - 268
Target Start/End: Complemental strand, 12658254 - 12658072
Alignment:
Q  79 gctgcttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctc 178  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||    
T  12658254 gctgcttttgcttcttcgacaa-gctgcctattttagtatttctgacctagagcccatggtttcttgtgcaacactttagtgatttatttcttagggctc 12658156  T
Q  179 aagtcaatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||| |||||||||| |||||||||| || || ||       ||||| |||||||||||||| |||||||||||||||||    
T  12658155 aagtcaatgttagaccataaatagagtagccatctagcttttataa-------ttgttgttggaaataataagcgacaattgtttctttga 12658072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 83 - 242
Target Start/End: Complemental strand, 23574886 - 23574727
Alignment:
Q  83 cttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagt 182  Q
    |||||||||||||||||| ||  |||||||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||||||||||||||| ||||    
T  23574886 cttttgcttcttcgacaa-gcttcctattttagtatttctgacctcgagcccatgttttcttgtgcaacactttagtgatttaattcttggggcttaagt 23574788  T
Q  183 caatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaa 242  Q
    ||||||| ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  23574787 caatgttggactataaatagagcagccctctagtttgtaaaatcatcttttgttcttggaa 23574727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 116 - 262
Target Start/End: Complemental strand, 23524130 - 23523983
Alignment:
Q  116 tatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagcagccatctag 215  Q
    |||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| |||||||||||||||||| || |||||||||||| ||||||||    
T  23524130 tatttctgacctagagcccatgttttcttgtgcaacactttagtgatttaattcttagggctcaagtcaatgttaaacaataaatagagcaaccatctag 23524031  T
Q  216 -ttgtaaaaccatcttttgttcttggaaataataagtgacaattgttt 262  Q
     || | ||| ||| |||||||||||||| | |  ||||||||||||||    
T  23524030 tttttgaaatcatattttgttcttggaattcaatagtgacaattgttt 23523983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 262
Target Start/End: Complemental strand, 25031402 - 25031255
Alignment:
Q  116 tatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagcagccatctag 215  Q
    ||||| ||||||| ||||| ||||||||| ||||||| |||||||||||| ||||| ||||| ||||||||||| |||||||||||||||| ||||| ||    
T  25031402 tatttttgacctaaagcccgtggtttcttgtgcaacactttagtgatttatttcttagggcttaagtcaatgttggactataaatagagcaaccatcaag 25031303  T
Q  216 -ttgtaaaaccatcttttgttcttggaaataataagtgacaattgttt 262  Q
     ||||| || |||||||||||||  ||||| |  ||||||||||||||    
T  25031302 cttgtataatcatcttttgttctctgaaattaatagtgacaattgttt 25031255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 268
Target Start/End: Complemental strand, 28734324 - 28734170
Alignment:
Q  116 tatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagcagccatctag 215  Q
    ||||| ||||||| ||| | ||||||||| ||||||| |||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||||||  ||    
T  28734324 tatttttgacctaaagctcgtggtttcttgtgcaacactttagtgatttatttcttagggcttaagtcattgttagactataaatagagcagccataaag 28734225  T
Q  216 -ttgtaaaaccatcttttgttcttggaaataataagtgacaattg-tttctttga 268  Q
     ||||| || ||||||||||||| |||| | |  ||||||||||| |||||||||    
T  28734224 cttgtataatcatcttttgttctcggaatttaatagtgacaattgctttctttga 28734170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 83 - 212
Target Start/End: Complemental strand, 13217530 - 13217402
Alignment:
Q  83 cttttgcttcttcgacaaagccgcctatttta-gtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaag 181  Q
    |||||||||||||||||| |  |||| ||||  |||||||||||||| ||||||  ||||||| ||||| |||||||||||||| ||||| ||||| |||    
T  13217530 cttttgcttcttcgacaa-gttgcctgttttgtgtatttctgacctaaagcccagagtttcttgtgcaa-aatttagtgatttatttcttagggcttaag 13217433  T
Q  182 tcaatgttagactataaatagagcagccatc 212  Q
    ||| |||||||||||||||||||||||||||    
T  13217432 tcattgttagactataaatagagcagccatc 13217402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 17743528 - 17743571
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  17743528 catcttttgttcttggaaataataagtgacaattgtttctttga 17743571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 18233888 - 18233845
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18233888 catcttttgttcttggaaataataagtgacaattgtttctttga 18233845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 20222916 - 20222959
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20222916 catcttttgttcttggaaataataagtgacaattgtttctttga 20222959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 22116900 - 22116943
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22116900 catcttttgttcttggaaataataagtgacaattgtttctttga 22116943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 25949338 - 25949381
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25949338 catcttttgttcttggaaataataagtgacaattgtttctttga 25949381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 25963938 - 25963981
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25963938 catcttttgttcttggaaataataagtgacaattgtttctttga 25963981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 25968585 - 25968628
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25968585 catcttttgttcttggaaataataagtgacaattgtttctttga 25968628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 20221191 - 20221234
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  20221191 catcttttgttcttggaaataataagtgacaattgtttttttga 20221234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 22115175 - 22115218
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  22115175 catcttttgttcttggaaataataagtgacaattgtttttttga 22115218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 31965625 - 31965582
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  31965625 catcttttgttcttggaaattataagtgacaattgtttctttga 31965582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 268
Target Start/End: Original strand, 3923554 - 3923702
Alignment:
Q  116 tatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagcagcc--atct 213  Q
    ||||| ||||||| ||||| ||||||||| ||||||| |||||||||||| |||||  |||| |||||      ||||||||||||||||||||  |||     
T  3923554 tatttttgacctaaagcccgtggtttcttgtgcaacactttagtgatttatttctt-aggcttaagtc------agactataaatagagcagccatatca 3923646  T
Q  214 ag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    || ||||| || |||||||||||||  ||||| |  ||||||||||||| ||||||    
T  3923647 agcttgtataatcatcttttgttctctgaaattaatagtgacaattgttactttga 3923702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 20464317 - 20464430
Alignment:
Q  156 tagtgatttaattcttggggctcaagtcaatgttagactataaatagagcagccatct-agttgtaaaaccatcttttgttcttggaaataataagtgac 254  Q
    |||||||||| ||||| ||||| |||||| | |||  |||||||||||||| |||||  |  |||  |  ||||||||||||||| |||| |||||||||    
T  20464317 tagtgatttatttcttagggcttaagtcagtattaagctataaatagagcaaccatcggacatgtctattcatcttttgttcttgaaaattataagtgac 20464416  T
Q  255 aattgtttctttga 268  Q
    ||||||||||||||    
T  20464417 aattgtttctttga 20464430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 18195603 - 18195560
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  18195603 catcttttgttctctgaaataataagtgacaattgtttctttga 18195560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 18844476 - 18844519
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  18844476 catcttttgttctctgaaataataagtgacaattgtttctttga 18844519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 24218730 - 24218773
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  24218730 catcttttgttctctgaaataataagtgacaattgtttctttga 24218773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 25402537 - 25402494
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  25402537 catcttttgttctctgaaataataagtgacaattgtttctttga 25402494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 30245248 - 30245287
Alignment:
Q  229 ttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  30245248 ttttgttcttggaaataataagtgacaattgtttatttga 30245287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 17284342 - 17284234
Alignment:
Q  7 caaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaaccc-ttttacccttttgctgcttttgcttcttcgacaaagc 103  Q
    ||||||||| | |||| ||||||||||||||||||| ||  |||||  |||||||||  ||| || ||||||||||||||||||||||| | ||| ||||    
T  17284342 caaaaatatctggtgcaaagaatttgaagatcttgtacattaatatcaaagtggcgcgccccattatacccttttgctgcttttgcttcatagac-aagc 17284244  T
Q  104 cgcctatttt 113  Q
     |||||||||    
T  17284243 tgcctatttt 17284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 18184465 - 18184424
Alignment:
Q  227 tcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||  |||||||||||||||||||||||||||||    
T  18184465 tcttttgttctctgaaataataagtgacaattgtttctttga 18184424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 210216 - 210173
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||| ||||||||||||||||||||    
T  210216 catcttttgttctctgaaataatgagtgacaattgtttctttga 210173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 18448785 - 18448828
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  | |||||||||||||||||||||||||||    
T  18448785 catcttttgttctctgtaataataagtgacaattgtttctttga 18448828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 18854634 - 18854677
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||| ||||||||||||||||||||||    
T  18854634 catcttttgttctctgaaatattaagtgacaattgtttctttga 18854677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 23517631 - 23517585
Alignment:
Q  7 caaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata 53  Q
    ||||||||| |||||| ||||||||||||||||||| | ||||||||    
T  23517631 caaaaatattttgtgcaaagaatttgaagatcttgtaccaaaatata 23517585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 23574956 - 23574910
Alignment:
Q  7 caaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata 53  Q
    ||||||||| |||||| ||||||||||||||||||| | ||||||||    
T  23574956 caaaaatatcttgtgcaaagaatttgaagatcttgtaccaaaatata 23574910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 204
Target Start/End: Original strand, 18993097 - 18993185
Alignment:
Q  116 tatttctgacctaga-gcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagag 204  Q
    ||||||||||||| | |||||||||||||| || |||| | ||||||| || ||||| ||||| |||||| || || |||||||||||||    
T  18993097 tatttctgacctaaaagcccatggtttcttgtggaacattctagtgatatatttcttagggcttaagtcattg-taaactataaatagag 18993185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 26821880 - 26821917
Alignment:
Q  229 ttttgttcttggaaataataagtgacaattgtttcttt 266  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  26821880 ttttgttcttggaattaataagtgacaattatttcttt 26821917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 19612966 - 19612856
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagt--atttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattct 170  Q
    ||||||| || |||||||||||  |||| ||| ||||||| |||  |||||||||||| ||||||||||||||| || |||| | || |||| || |||     
T  19612966 ccttttgatgtttttgcttcttgtacaa-gccacctatttcagtttatttctgacctaaagcccatggtttcttgtggaacattctattgatatatttca 19612868  T
Q  171 tggggctcaagt 182  Q
    ||||||| ||||    
T  19612867 tggggcttaagt 19612856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 24393106 - 24393070
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgccta 109  Q
    |||||| |||||||||||||||||||||||| |||||    
T  24393106 ccttttactgcttttgcttcttcgacaaagctgccta 24393070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 25949110 - 25949204
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaacc--cttttacccttttgctgcttttgctt 91  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| |||| ||||  ||| |||||  ||  |||| | |||||||||||||||||||    
T  25949110 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatatacaagaggcgcgccccactttaatccttttgctgcttttgctt 25949204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25963710 - 25963762
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata 53  Q
    ||||| ||||||||| |||||| |||||||||||||| |||| |||| |||||    
T  25963710 ctcatacaaaaatatcttgtgcaaagaatttgaagatattgtacaaatatata 25963762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25968357 - 25968409
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata 53  Q
    ||||| ||||||||| |||||| |||||||||||||| |||| |||| |||||    
T  25968357 ctcatacaaaaatatcttgtgcaaagaatttgaagatattgtacaaatatata 25968409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 32543045 - 32543097
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata 53  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| |||| |||||    
T  32543045 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 32543097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 9e-79; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 20104229 - 20103983
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa---gtggcgcaaccctt-ttacccttttgctgcttttgcttcttcg 96  Q
    ||||| ||||||||| |||||| ||||||||||||||||| | |||||||||||   |||||||  ||| | |||||||| |||||||||||||| || |    
T  20104229 ctcatacaaaaatatcttgtgcaaagaatttgaagatcttatacaaaaatataacaagtggcgcgccccatattacccttctgctgcttttgcttatttg 20104130  T
Q  97 acaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactat 196  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  20104129 acaaagctgcctattttagtatttctgacctagagcctatggtttcttgtgcaacactttagtgatttaattcttggggctcaagtcaatgtaagactat 20104030  T
Q  197 aaatagagcagccatctagt-tgtaaaaccatcttttgttcttggaa 242  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  20104029 aaatagagcagccatctagtatgtaaaaccatattttgttcttggaa 20103983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 20738137 - 20738381
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata--agtggcgcaaccc-ttttacccttttgctgcttttgcttcttcga 97  Q
    ||||| ||||||||| |||||| ||||| ||||||||||||| ||| ||||||  |  | |||| ||| |||| ||||||||||||||||||||||||||    
T  20738137 ctcatacaaaaatatcttgtgcaaagaaattgaagatcttgtacaagaatatagcatagacgcacccccttttgcccttttgctgcttttgcttcttcga 20738236  T
Q  98 caaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactata 197  Q
    ||| || |||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20738237 caa-gctgcctattttagtatttctgacctagagcacatggtttcttgtgcaacactttagtgatttaattcttggggctcaagtcaatgttagactata 20738335  T
Q  198 aatagagcagccatctag-ttgtaaaaccatcttttgttcttggaa 242  Q
    |||| ||||||||||||| |||||||| ||||||||||||||||||    
T  20738336 aataaagcagccatctagtttgtaaaatcatcttttgttcttggaa 20738381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 2953838 - 2953576
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata--agtggcgcaaccc-ttttacccttttgctgcttttgcttcttcga 97  Q
    ||||| ||||||||| |||||| ||||| ||||||||||||| | | ||||||  |  |||||| ||| |||| |||||||||||||||||||||| |||    
T  2953838 ctcatacaaaaatatcttgtgcaaagaaattgaagatcttgtaccagaatatagcataggcgcaccccattttgcccttttgctgcttttgcttctccga 2953739  T
Q  98 caaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactata 197  Q
    ||| || |||||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||||    
T  2953738 caa-gctgcctattttagtatttctgacctagagcccatcgtttcttgtgcaacactttaatgatttaattattggggctcaagtcaatgttagactata 2953640  T
Q  198 aatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgt 260  Q
    ||||||| |||||||||| ||| |||| |||||||||||||||||| | |  ||||||||||||    
T  2953639 aatagagtagccatctagtttgaaaaatcatcttttgttcttggaattcaatagtgacaattgt 2953576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 116 - 268
Target Start/End: Original strand, 16676983 - 16677136
Alignment:
Q  116 tatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagcagccatctag 215  Q
    ||||||||||||| |||||||| |||||| ||||||| || ||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||| ||    
T  16676983 tatttctgacctaaagcccatgatttcttgtgcaacacttcagtgatttatttcttagggcttaagtcaatgttaggctataaatagagcagccatcaag 16677082  T
Q  216 -ttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
     ||||| || |||||||| ||||  ||||| |  ||||||||||||||||||||    
T  16677083 cttgtataatcatcttttcttctctgaaattaatagtgacaattgtttctttga 16677136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 22942371 - 22942414
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22942371 catcttttgttcttggaaataataagtgacaattgtttctttga 22942414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 204
Target Start/End: Original strand, 12410430 - 12410517
Alignment:
Q  116 tatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagag 204  Q
    ||||||||||||| ||||||||||||||| || |||| | |||||||||| ||||| ||||| |||||| || || |||||||||||||    
T  12410430 tatttctgacctaaagcccatggtttcttgtggaacattctagtgatttatttcttagggcttaagtcattg-taaactataaatagag 12410517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 20916026 - 20915983
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  20916026 catcttttgttcttggaaataataagtgacaattatttctttga 20915983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 24166271 - 24166314
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  24166271 catcttttgttcttggaaatgataagtgacaattgtttctttga 24166314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 24165229 - 24165307
Alignment:
Q  190 agactataaatagagcagccatctagttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||| |||||||||    ||| | |||||||||||||   ||||||||||||||||||||||||||||    
T  24165229 agactataaatagagtagccatctatcattaatatcatcttttgttctcttaaataataagtgacaattgtttctttga 24165307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 24214757 - 24214799
Alignment:
Q  226 atcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  24214757 atcttttgttctcggaaataataagtgacaattgtttctttga 24214799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 24220380 - 24220422
Alignment:
Q  226 atcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  24220380 atcttttgttctcggaaataataagtgacaattgtttctttga 24220422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 20967561 - 20967648
Alignment:
Q  7 caaaaatatattgtgcgaagaatttgaagatcttgtgcaaaa--atataagtggcgcaaccc-ttttacccttttgctgcttttgctt 91  Q
    ||||||||| || ||| ||||||||||||||||||| |||||  ||| |||||||||  ||| || ||||||||||||||||||||||    
T  20967561 caaaaatatcttatgcaaagaatttgaagatcttgtacaaaaacataaaagtggcgcgccccattatacccttttgctgcttttgctt 20967648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 15059388 - 15059431
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  15059388 catcttttgttctctgaaataataagtgacaattgtttctttga 15059431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 20169535 - 20169492
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  20169535 catcttttgttattggaaagaataagtgacaattgtttctttga 20169492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 23343619 - 23343576
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  23343619 catcttttgttctctgaaataataagtgacaattgtttctttga 23343576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 23343825 - 23343733
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaacccttttacccttttgctgcttttgctt 91  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| ||| |||||  ||||||| |  || || ||||||||||||| ||||||||    
T  23343825 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataaaagtggcacgcccattatacccttttgctgtttttgctt 23343733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 20967762 - 20967805
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  ||||||||||||||||||| |||||||||    
T  20967762 catcttttgttctctgaaataataagtgacaattttttctttga 20967805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 23029655 - 23029612
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||| ||||||||  |||||||||||||    
T  23029655 catcttttgttcttggaaattataagtgaagattgtttctttga 23029612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15059240 - 15059293
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa 54  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| ||| |||||||    
T  15059240 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa 15059293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 73 - 268
Target Start/End: Original strand, 13069632 - 13069827
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttg 172  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||||  ||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  13069632 ccttttgctgcttttgcttcttcgacaa-gcttcctattttagtattcatgacctagaacccatggtttcttgtgcaacactttagtgatttaattcttg 13069730  T
Q  173 gggctcaagtcaatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13069731 gggctcaagtcaatgttagactataaaaagagcagccatctagcttgtaaaatcatcttttgttcttggaaataataagtgacaattgtttctttga 13069827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 83 - 268
Target Start/End: Original strand, 17023106 - 17023290
Alignment:
Q  83 cttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagt 182  Q
    ||||||||| |||||||| || ||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  17023106 cttttgcttattcgacaa-gctgcctattttagtatttctgacctagagcc-atggtttcttgtgcaacactttagtgatttaattcttggggctcaagt 17023203  T
Q  183 caatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17023204 caatgttagactataaatagagcagccatctagtttgtaaacccatcttttgttcttggaaataataagtgacaattgtttctttga 17023290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 64 - 217
Target Start/End: Complemental strand, 20225497 - 20225344
Alignment:
Q  64 cccttttacccttttgctgcttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatt 163  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  20225497 cccttttacccttttgctgcttttgcttcttcgacaaagctgcctattttagtatttctgacctagagcccatggtttcttgtgcaacactttagtgatt 20225398  T
Q  164 taattcttggggctcaagtcaatgttagactataaatagagcagccatctagtt 217  Q
    | |||||| ||| ||||||||||||||||||||||||||||||||||| |||||    
T  20225397 tcattcttagggttcaagtcaatgttagactataaatagagcagccatgtagtt 20225344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 83 - 242
Target Start/End: Original strand, 22038747 - 22038896
Alignment:
Q  83 cttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagt 182  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||| |||           |||||||||||||||||||||||    
T  22038747 cttttgcttcttcgacaaagctgcctatttttgtatttctgacctagagtccatggtttcttgtgc-----------gatttaattcttggggctcaagt 22038835  T
Q  183 caatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaa 242  Q
    |||||||||||||||||||||| || ||||||| ||||| |||||| ||||||||||||||    
T  22038836 caatgttagactataaatagagtagtcatctagtttgtagaaccatattttgttcttggaa 22038896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 13601524 - 13601613
Alignment:
Q  7 caaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat---aagtggcgcaacccttttacccttttgctgcttttgcttct 93  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||   |||||||||  |||||||||||||||| ||||| |||||||    
T  13601524 caaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgccccttttacccttttgttgcttctgcttct 13601613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 266
Target Start/End: Complemental strand, 11870064 - 11869871
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagt--atttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattct 170  Q
    |||||||||||||||||||||  ||||| || |||| ||| |||  |||||||||||| ||||||| ||||||| || |||| | || |||| || |||     
T  11870064 ccttttgctgcttttgcttctcggacaa-gctgcctgttt-agtttatttctgacctaaagcccatagtttcttgtggaacattctattgatgtatttcc 11869967  T
Q  171 tggggctcaagtcaatgttagactataaatagagcagccatctagt-tgtaaaaccatcttttgttcttggaaataataagtgacaattgtttcttt 266  Q
    ||||||| ||||   ||| ||||||||||||||| ||| | | ||  | |  || ||||||||||||||||||||||||||||||||||||||||||    
T  11869966 tggggcttaagtagttgt-agactataaatagagtagctagcaagcatattgaatcatcttttgttcttggaaataataagtgacaattgtttcttt 11869871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 8685923 - 8685880
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  8685923 catcttttgttcttggaaataataagtgacaattgtttctttga 8685880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14495099 - 14495006
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaaccc-ttttacccttttgctgcttttgctt 91  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| |||||||||  |||||||||  ||| || ||||||||||||||||||||||    
T  14495099 ctcatacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaaaatataaaagtggcgcgccccattatacccttttgctgcttttgctt 14495006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 2721945 - 2721988
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  2721945 catcttttattcttggaaataataagtgacaattgtttctttga 2721988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 34053679 - 34053636
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  34053679 catcttctgttcttggaaataataagtgacaattgtttctttga 34053636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14661067 - 14660974
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaaccc-ttttacccttttgctgcttttgctt 91  Q
    ||||| |||||||||  ||| ||||||||||||||||||||| ||| |||||  |||||||||  ||| || ||||||||||||||||||||||    
T  14661067 ctcatacaaaaatatcatgtacgaagaatttgaagatcttgtacaataatataaaagtggcgcgccccattatacccttttgctgcttttgctt 14660974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 6236874 - 6236917
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  6236874 catcttttgttctctgaaataataagtgacaattgtttctttga 6236917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 11398904 - 11398947
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||||||||| ||||| |||||||||||    
T  11398904 catcttttgttcttggaaataataagggacaaatgtttctttga 11398947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 14494892 - 14494849
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  14494892 catcttttgttctctgaaataataagtgacaattgtttctttga 14494849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 14660859 - 14660816
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  14660859 catcttttgttctctgaaataataagtgacaattgtttctttga 14660816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 14976376 - 14976333
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  14976376 catcttttgttctctgaaataataagtgacaattgtttctttga 14976333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 41545829 - 41545786
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  41545829 catcttttgttcttggaaattataagtgacaaatgtttctttga 41545786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 43842139 - 43842100
Alignment:
Q  229 ttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  43842139 ttttgttctcggaaataataagtgacaattgtttctttga 43842100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 17041746 - 17041783
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgttt 262  Q
    |||||||||||||| |||||||||||||||||||||||    
T  17041746 catcttttgttcttcgaaataataagtgacaattgttt 17041783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 17050756 - 17050793
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgttt 262  Q
    |||||||||||||||||||||||||||| |||||||||    
T  17050756 catcttttgttcttggaaataataagtggcaattgttt 17050793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22038670 - 22038723
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa 54  Q
    ||||| ||||||||| |||||| ||||||||| ||||||||| |||||||||||    
T  22038670 ctcatacaaaaatatcttgtgcaaagaatttggagatcttgtacaaaaatataa 22038723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 261
Target Start/End: Complemental strand, 19656179 - 19656143
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtt 261  Q
    ||||||||||||| |||||||||||||||||||||||    
T  19656179 catcttttgttctcggaaataataagtgacaattgtt 19656143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 42244624 - 42244581
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  ||||||||||||||||||||||| |||||    
T  42244624 catcttttgttctctgaaataataagtgacaattgtttatttga 42244581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11398676 - 11398728
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata 53  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| |||| |||||    
T  11398676 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 11398728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 20225315 - 20225271
Alignment:
Q  216 ttgtaaaaccatcttttgttcttggaaataataagtgacaattgt 260  Q
    ||||||||||||||||||||||||||| | |  ||||||||||||    
T  20225315 ttgtaaaaccatcttttgttcttggaattcaatagtgacaattgt 20225271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25054822 - 25054874
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata 53  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| |||| |||||    
T  25054822 ctcatacaaaaatattatgtgcaaagaatttgaagatcttgtacaaatatata 25054874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36075982 - 36076034
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata 53  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| |||| |||||    
T  36075982 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 36076034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 7 - 242
Target Start/End: Complemental strand, 22699 - 22460
Alignment:
Q  7 caaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa---gtggcgcaacccttttacccttttgctgcttttgcttcttcgacaaagc 103  Q
    ||||||||| |||||| |||||||||||||| |||| |||||||||||   ||| |||  || |||| ||||||||||| |||||| |||||||||||||    
T  22699 caaaaatatcttgtgcaaagaatttgaagatattgtacaaaaatataacaagtgacgcgcccattttgcccttttgctgtttttgcctcttcgacaaagc 22600  T
Q  104 cgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaataga 203  Q
      |||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  22599 tacctattttagtatttctgacctagagtccatgatttcttgtgcaacactttagtgatataattcttggggttcaagtcaatgttagactataaataga 22500  T
Q  204 gcagccatctag-ttgtaaaaccatcttttgttcttggaa 242  Q
    ||| |||||||| |||||||||||||||||||||||||||    
T  22499 gcaaccatctagtttgtaaaaccatcttttgttcttggaa 22460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 72 - 262
Target Start/End: Complemental strand, 6930 - 6738
Alignment:
Q  72 cccttttgctgcttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattctt 171  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||| |||||| |||||||||||    
T  6930 cccttttgctgcttttgcttcttcgacaaagctgcctattttagtatttcagacctagagcctatggtttcttgtgcaacactttagtaatttaattctt 6831  T
Q  172 ggggctcaagtc--aatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgttt 262  Q
    |||||| |||||  |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  6830 ggggctgaagtcaaaatgttagactataaatagatcagtcatctagtttgtaaaaccatcttttgttctt-gaaataataagtgacaattgttt 6738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 7 - 268
Target Start/End: Original strand, 38651937 - 38652200
Alignment:
Q  7 caaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata--agtggcgcaaccctt-ttacccttttgctgcttttgcttcttcgacaaagc 103  Q
    ||||||||| |||||| ||||||| ||||||||||||| ||||||||  |  |||||  ||| | || |||||||| |||||||||||||||||||| ||    
T  38651937 caaaaatatcttgtgcaaagaattggaagatcttgtgccaaaatatagcataggcgcgccccatattgcccttttgttgcttttgcttcttcgacaa-gc 38652035  T
Q  104 cgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaataga 203  Q
     || ||||||||||||| | | |||||||||||| |||||| ||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  38652036 tgcttattttagtatttttaaactagagcccatgttttcttgtgcaacactttagtgttttaaatcttggggctcaagtcaatgttagactataaataga 38652135  T
Q  204 gcagccatctagttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||| |||||||||   ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  38652136 gcagtcatctagtttgtaaatcatcttttgttattggaaataataagtgacaattgtttctttga 38652200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 73 - 266
Target Start/End: Complemental strand, 11922679 - 11922484
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagt--atttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattct 170  Q
    |||||||||  ||||||||||||||||| ||  |||||||||||  |||||||||||| ||||| ||||||||| ||||||| ||||||||| || ||||    
T  11922679 ccttttgctatttttgcttcttcgacaa-gctacctattttagtttatttctgacctaaagcccttggtttcttgtgcaacactttagtgatctatttct 11922581  T
Q  171 tggggctcaagtcaatgttagactataaatagagcagccatc-tagttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttcttt 266  Q
    | ||||| |||||| |||||| |||||||||||| |||||||  | ||||| |   || ||||||||||||||||||||||||||||||||||||||    
T  11922580 tagggcttaagtcattgttaggctataaatagagtagccatcaaacttgtatattaatattttgttcttggaaataataagtgacaattgtttcttt 11922484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 5513868 - 5513673
Alignment:
Q  74 cttttgctgcttttgcttcttcgacaaagccgcctattttagt--atttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattctt 171  Q
    ||||||||||||||||||||||||||| || | || ||| |||  |||||||||||| |||||||||||||||||| |||| | || |||| ||||||||    
T  5513868 cttttgctgcttttgcttcttcgacaa-gctgtctgttt-agtttatttctgacctaaagcccatggtttcttatggaacattctattgatgtaattctt 5513771  T
Q  172 ggggctcaagtcaatgttagactataaatagagcagcca-tctagttgtaaaaccatcttttgttcttggaaa-taataagtgacaattgtttctttga 268  Q
    |||||| |||| | | |||||||||||||| |||||| |    |  | |  || ||||||||||||||| ||| |||||||||||||||||||||||||    
T  5513770 ggggcttaagt-agttttagactataaataaagcagctagaaaacatattcaatcatcttttgttcttgtaaattaataagtgacaattgtttctttga 5513673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 73 - 212
Target Start/End: Complemental strand, 12346180 - 12346040
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagt--atttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattct 170  Q
    ||||||||| ||||||||||||| |||| || | || ||| |||  |||||||||||| ||||||||||||||| || |||| | |||| ||||| ||||    
T  12346180 ccttttgctacttttgcttcttctacaa-gctgtctgtttaagtttatttctgacctaaagcccatggtttcttgtgtaacactgtagtaatttatttct 12346082  T
Q  171 tggggctcaagtcaatgttagactataaatagagcagccatc 212  Q
    | ||||| || ||||| || | ||||||||||||||||||||    
T  12346081 tagggcttaaatcaatatttggctataaatagagcagccatc 12346040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 11889047 - 11889004
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11889047 catcttttgttcttggaaataataagtgacaattgtttctttga 11889004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 11902692 - 11902651
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttcttt 266  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  11902692 catcttttgttcttggaaataataagtgacaattgtttcttt 11902651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 31593907 - 31593950
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  31593907 catcttttgttctttgaaataataagtgacaattgtttctttga 31593950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 24125504 - 24125411
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaaccc-ttttacccttttgctgcttttgctt 91  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| ||| |||||  |||||||||  ||| || ||||||||||||||||||||||    
T  24125504 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataaaagtggcgcgccccgttatacccttttgctgcttttgctt 24125411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10730939 - 10731032
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat---aagtggcgcaacccttttacccttttgctgcttttgcttc 92  Q
    ||||| ||||||||| || ||| |||||||| ||||||||||||||||||||   ||||||||   |||||||| ||||||||||||| ||||||    
T  10730939 ctcatacaaaaatatcttatgcaaagaatttaaagatcttgtgcaaaaatataacaagtggcgtgcccctttta-ccttttgctgcttctgcttc 10731032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10944708 - 10944801
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat---aagtggcgcaacccttttacccttttgctgcttttgcttc 92  Q
    ||||| ||||||||| || ||| |||||||| ||||||||||||||||||||   ||||||||   |||||||| ||||||||||||| ||||||    
T  10944708 ctcatacaaaaatatcttatgcaaagaatttaaagatcttgtgcaaaaatataacaagtggcgtgcccctttta-ccttttgctgcttctgcttc 10944801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 24125298 - 24125254
Alignment:
Q  224 ccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  24125298 ccatcttttgttctctgaaataataagtgacaattgtttctttga 24125254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 6518380 - 6518423
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  6518380 catcttttgttctctgaaataataagtgacaattgtttctttga 6518423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 16951910 - 16951953
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  16951910 catcttttgttctctgaaataataagtgacaattgtttctttga 16951953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 20059232 - 20059189
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  20059232 catcttttgttctctgaaataataagtgacaattgtttctttga 20059189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 182
Target Start/End: Complemental strand, 33331228 - 33331118
Alignment:
Q  72 cccttttgctgcttttgcttcttcgacaaagccgcctattttag--tatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattc 169  Q
    |||||||||||||||| |||||||||| |||| ||||| |||||  ||||| ||||||| ||||||| ||||||| || |||| | || |||| || |||    
T  33331228 cccttttgctgcttttacttcttcgac-aagctgccta-tttagtttatttatgacctaaagcccatagtttcttgtggaacattctactgatgtatttc 33331131  T
Q  170 ttggggctcaagt 182  Q
    |||||||| ||||    
T  33331130 ttggggcttaagt 33331118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 232 - 268
Target Start/End: Complemental strand, 3772249 - 3772213
Alignment:
Q  232 tgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||||||||||| ||||||||    
T  3772249 tgttcttggaaataataagtgacaattgcttctttga 3772213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 3355271 - 3355314
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||   ||||||||||||||||||||||||||||    
T  3355271 catcttttgttctataaaataataagtgacaattgtttctttga 3355314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 18287006 - 18287049
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  ||||||||||||||||||| |||||||||    
T  18287006 catcttttgttctctgaaataataagtgacaattctttctttga 18287049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 21275246 - 21275289
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  ||||||||||| |||||||||||||||||    
T  21275246 catcttttgttctctgaaataataagggacaattgtttctttga 21275289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 268
Target Start/End: Complemental strand, 23793768 - 23793630
Alignment:
Q  130 agcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagcagccatc-tagttgtaaaaccatc 228  Q
    ||||||||||||||| || |||| | || |||| || ||||||||||| |||| | | |||| |||||||||||||||| | |  |  | ||    ||||    
T  23793768 agcccatggtttcttgtggaacattctattgatgtatttcttggggcttaagttagttttaggctataaatagagcagctaacaaacatatattctcatc 23793669  T
Q  229 ttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  23793668 ttttgttcttggaaattataagtg-caattgtttctttga 23793630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 43701642 - 43701599
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||| |  |||||||||||||||||||||||||||||    
T  43701642 catcttttgttatctgaaataataagtgacaattgtttctttga 43701599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3772489 - 3772439
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaata 51  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| ||| ||||    
T  3772489 ctcatacaaaaatataatgtgcaaagaatttgaagatcttgtacaataata 3772439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 21275039 - 21275132
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaaccc-ttttacccttttgctgcttttgctt 91  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| ||| |||||  |||||||    ||| || ||||||||||||||||||||||    
T  21275039 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgttcaataatataaaagtggcatgccccattatacccttttgctgcttttgctt 21275132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11902908 - 11902867
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgt 42  Q
    ||||| ||||||||| |||||| |||||||||||||||||||    
T  11902908 ctcatacaaaaatatcttgtgcaaagaatttgaagatcttgt 11902867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45233979 - 45233926
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa 54  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| ||| |||||||    
T  45233979 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa 45233926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 207
Target Start/End: Complemental strand, 9487270 - 9487138
Alignment:
Q  74 cttttgctgcttttgcttcttcgacaaagccgcctattttagt--atttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattctt 171  Q
    |||||||||||||| ||||| |||||| || |||||||| |||  |||||| ||||| ||||| | ||||||| || |||| | || |||| || |||||    
T  9487270 cttttgctgcttttacttctccgacaa-gctgcctattt-agtctatttctaacctaaagcccgtagtttcttgtggaacactctattgatgtatttctt 9487173  T
Q  172 ggggctcaagtcaatgttagactataaatagagcag 207  Q
    |||||| ||||   ||| ||||||||||||||||||    
T  9487172 ggggcttaagtagttgt-agactataaatagagcag 9487138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31593679 - 31593731
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata 53  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| |||| |||||    
T  31593679 ctcatacaaaaatattctgtgcaaagaatttgaagatcttgtacaaatatata 31593731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 73 - 262
Target Start/End: Original strand, 26853930 - 26854119
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttg 172  Q
    |||||||| ||||||||||||||||||| || || |||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  26853930 ccttttgcagcttttgcttcttcgacaa-gctgcgtattttagtatttctgacctagagcccatgttttcttgtgcaacactttagtgatttaattcttg 26854028  T
Q  173 gggctcaagtcaatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgttt 262  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| | |  ||||||||||||||    
T  26854029 gggctcaagtcaatgttagactatagatagagcagccatctagtttgtaaaatcatcttttgttcttggaattcaatagtgacaattgttt 26854119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 21319289 - 21319445
Alignment:
Q  83 cttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagt 182  Q
    |||||||||||||||||| || | |||||||||||||||| || ||||| |||||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  21319289 cttttgcttcttcgacaa-gctggctattttagtatttcttacttagagtccatggtttcttgtgcaacactttagtgatttaattcttggggctgaagt 21319387  T
Q  183 caatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttg 239  Q
    |||||||||||||| |||||||||||||||||| || ||||| |||||||||||||||    
T  21319388 caatgttagactattaatagagcagccatctagtttataaaaacatcttttgttcttg 21319445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 116 - 266
Target Start/End: Original strand, 24341960 - 24342111
Alignment:
Q  116 tatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagcagccatctag 215  Q
    ||||||||||||| |||| ||||| |||| ||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| |||| ||    
T  24341960 tatttctgacctaaagcctatggtgtcttgtgcaacactttagtgatttatttcttagggcttaagtcaatgttaggctataaatagagcagtcatcaag 24342059  T
Q  216 -ttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttcttt 266  Q
     ||||| || |||||||||||||| |||||||||||||||||||||||||||    
T  24342060 cttgtataatcatcttttgttcttagaaataataagtgacaattgtttcttt 24342111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 139 - 266
Target Start/End: Complemental strand, 19792393 - 19792265
Alignment:
Q  139 tttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttct 237  Q
    |||||| ||||||| |||||||||||| ||||| ||||| |||||| |||||||||||||||||||||| |||| || ||||| || ||||||| |||||    
T  19792393 tttcttgtgcaacactttagtgatttatttcttagggcttaagtcattgttagactataaatagagcagacatcaagcttgtataatcatctttagttct 19792294  T
Q  238 tggaaataataagtgacaattgtttcttt 266  Q
    |||||||||||||||||||||||||||||    
T  19792293 tggaaataataagtgacaattgtttcttt 19792265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 10050 - 9973
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat---aagtggcgcaacccttttaccct 75  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||| |||||||||||||    
T  10050 ctcatgcaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgacccttttaccct 9973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 25396948 - 25396991
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25396948 catcttttgttcttggaaataataagtgacaattgtttctttga 25396991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 26012993 - 26013036
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  26012993 catcttttgttcttggaaataataagtgacaattgtttctttga 26013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 18161807 - 18161899
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaacccttttacccttttgctgcttttgctt 91  Q
    ||||| ||||||||| |||||| ||||||||||||||||||| ||| |||||  |||||||||  || || |||| |||||||||||||||||    
T  18161807 ctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataaaagtggcgcgcccattataccattttgctgcttttgctt 18161899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 268
Target Start/End: Complemental strand, 24221778 - 24221584
Alignment:
Q  76 tttgctgcttttgcttcttcgacaaagccgcctattttagt--atttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttgg 173  Q
    ||||||||||||||||| | ||  |||| |||| |||||||  |||||||||||| ||||||||||||||| || |||| | || ||||  | ||||| |    
T  24221778 tttgctgcttttgcttcct-gatcaagctgccttttttagtttatttctgacctaaagcccatggtttcttgtggaacattctattgatggatttcttag 24221680  T
Q  174 ggctcaagtcaatgttagactataaatagagcagccatc-tagttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||| |||| | | ||||||||||||||||||| | | |  |  | || || ||| ||||||||||||||||  |||||||||||| |||||||||    
T  24221679 ggcttaagttagttttagactataaatagagcaactagcaaacatatacaatcattttttgttcttggaaattctaagtgacaattatttctttga 24221584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 22904610 - 22904653
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  22904610 catcttttgttcttggaaattataagtgacaattgtttctttga 22904653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 23194033 - 23193990
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  23194033 catcttttgttcttggaaataataactgacaattgtttctttga 23193990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 24967077 - 24967163
Alignment:
Q  9 aaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaaccc-ttttacccttttgctgcttttgcttc 92  Q
    ||||||| |||||| ||||||||||||||||||| ||| |||||  |||||||||  ||| || |||||||||||||||||||||||    
T  24967077 aaaatatcttgtgcaaagaatttgaagatcttgtacaataatataaaagtggcgcgccccattatacccttttgctgcttttgcttc 24967163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 14351912 - 14351827
Alignment:
Q  9 aaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaaccc-ttttacccttttgctgcttttgctt 91  Q
    ||||||| |||||| ||||||||||||||||||| ||| |||||  |||||||||  ||| || ||||||||||||||||||||||    
T  14351912 aaaatatcttgtgcaaagaatttgaagatcttgtacaataatataaaagtggcgcgccccattatacccttttgctgcttttgctt 14351827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 14878366 - 14878323
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  14878366 catcttttcttcttgaaaataataagtgacaattgtttctttga 14878323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 18162013 - 18162056
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  18162013 catcttttgttctctgaaataataagtgacaattgtttctttga 18162056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 23221583 - 23221540
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  23221583 catcttttcttcttgaaaataataagtgacaattgtttctttga 23221540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 6279740 - 6279783
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||| |||  |||||||||||||||||||||||||||||    
T  6279740 catcttttgctctctgaaataataagtgacaattgtttctttga 6279783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 14162224 - 14162181
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  ||||||||||||||||||||||| |||||    
T  14162224 catcttttgttctctgaaataataagtgacaattgtttatttga 14162181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 14351713 - 14351670
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||| ||||||    
T  14351713 catcttttgttctatgaaataataagtgacaattgttcctttga 14351670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 268
Target Start/End: Complemental strand, 17515870 - 17515842
Alignment:
Q  240 gaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||||||||||||    
T  17515870 gaaataataagtgacaattgtttctttga 17515842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 73 - 262
Target Start/End: Original strand, 21509 - 21698
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttg 172  Q
    |||||||  ||||||||||||| ||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||     
T  21509 ccttttgtggcttttgcttcttggacaa-gctgcctattttagtatttctgacctagaacccatggtttcttgtgcaacactttagtgatttatttctta 21607  T
Q  173 gggctcaagtcaatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgttt 262  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||| | |  ||||||||||||||    
T  21608 gggctcaagtcaatgttagactataaattgagcagccatctagcttgtaaaatcatcttttgttctttgaatttaatagtgacaattgttt 21698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 4e-56; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 73 - 262
Target Start/End: Complemental strand, 25337383 - 25337195
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagtatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttg 172  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||  ||||     
T  25337383 ccttttgctgcttttgcttcttcgacaa-gctgcctattttagtatttctgacctagagcccatggtttcttgtgca-cactttagtgatttatatctta 25337286  T
Q  173 gggctcaagtcaatgttagactataaatagagcagccatctag-ttgtaaaaccatcttttgttcttggaaataataagtgacaattgttt 262  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| ||||| || |||||||||||||||||| | |  ||||||||||||||    
T  25337285 gggctcaagtcaatgttagtctataaatagagcagccttctagcttgtagaatcatcttttgttcttggaattcaatagtgacaattgttt 25337195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 34 - 238
Target Start/End: Complemental strand, 25858907 - 25858695
Alignment:
Q  34 agatcttgtgcaaaaatataa---gtggcgcaacccttttacccttttgctgcttttgcttcttcgacaaagccgcctattttagtatttctgacctaga 130  Q
    ||||||||| |||||||||||   |||||||  |||| ||  |||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  25858907 agatcttgtacaaaaatataacaagtggcgcgcccctattgtccttttgctgattttgattctacgacaaagctgcctattttagtatttctgacctaga 25858808  T
Q  131 gcccatggtttcttatgca-----acaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagcagccatctag-ttgtaaaac 224  Q
    |||||||||||||| ||||     ||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||| |||||||||    
T  25858807 gcccatggtttcttgtgcaacactacactatagcgatttaattcttggggatcaagtcaatgttagactataaatagagcagtc-tctagtttgtaaaac 25858709  T
Q  225 catcttttgttctt 238  Q
    ||||||||||||||    
T  25858708 catcttttgttctt 25858695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 73 - 268
Target Start/End: Original strand, 15583668 - 15583865
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagt--atttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattct 170  Q
    ||||||||||||||||||||||| |||| || ||||||||||||  |||||||||||| ||||||||||||||| ||||||| || ||||||||| ||||    
T  15583668 ccttttgctgcttttgcttcttcaacaa-gctgcctattttagtttatttctgacctaaagcccatggtttcttgtgcaacacttcagtgatttatttct 15583766  T
Q  171 tggggctcaagtcaatgttagactataaatagagcagccatc-tagttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    | ||| | |||||| ||||||||||||||||||||||| | |  | |||||    |||||||||||||||||||||||||||||||| |||||||||||    
T  15583767 tagggtttaagtcattgttagactataaatagagcagcgaccaaacttgtattctcatcttttgttcttggaaataataagtgacaactgtttctttga 15583865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 24366463 - 24366353
Alignment:
Q  133 ccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagcagccatctag-ttgtaaaaccatcttt 231  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  24366463 ccatggtttcttgtgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagcagtcatctagtttgtaaaaccatcttt 24366364  T
Q  232 tgttcttggaa 242  Q
    |||| ||||||    
T  24366363 tgttgttggaa 24366353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 24369186 - 24369087
Alignment:
Q  133 ccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagcagccatctag-ttgtaaaaccatcttt 231  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  24369186 ccatggtttcttgtgcaacaatttaatgatttaattcttggggctcaagtcaatgttagactataaatagagcagtcatctagtttgtaaaaccatcttt 24369087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 20282065 - 20282108
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20282065 catcttttgttcttggaaataataagtgacaattgtttctttga 20282108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 23340594 - 23340637
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23340594 catcttttgttcttggaaataataagtgacaattgtttctttga 23340637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 268
Target Start/End: Original strand, 20852025 - 20852177
Alignment:
Q  116 tatttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattcttggggctcaagtcaatgttagactataaatagagcagccatctag 215  Q
    ||||||||||||| ||||||||||||||| || |||| | || |||| || ||||||||||| |||| | |  ||| |||||||||||||||| | | |     
T  20852025 tatttctgacctaaagcccatggtttcttgtggaacattctattgatgtatttcttggggcttaagt-agttataggctataaatagagcagcgagcaaa 20852123  T
Q  216 t-tgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
      | |   | |||||||||||||| |||||||||||||||||||||||||||||    
T  20852124 catattgtatcatcttttgttcttcgaaataataagtgacaattgtttctttga 20852177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 16134267 - 16134224
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  16134267 catcttttgttctttgaaataataagtgacaattgtttctttga 16134224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 268
Target Start/End: Complemental strand, 19124560 - 19124365
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagt--atttctgacctagagcccatggtttcttatgcaacaatttagtgatttaattct 170  Q
    ||||||| |||||||||||||||||||| || |||||||| |||  |||| |||| || ||||||||||||||| || |||| | || ||||  | ||||    
T  19124560 ccttttgttgcttttgcttcttcgacaa-gctgcctattt-agtttatttatgacataaagcccatggtttcttgtgaaacattctattgatgcatttct 19124463  T
Q  171 tggggctcaagtcaatgttagactataaatagagcagccatctagt-tgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||| |||| | | ||||||||||||||||| ||| | | |   | |  |  |||||||||||| || ||||||||||||||||||||||||||||    
T  19124462 tggggcttaagt-agttttagactataaatagagtagctagcaaacatattcattcatcttttgttcatgaaaataataagtgacaattgtttctttga 19124365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 25481185 - 25481278
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaac-ccttttacccttttgctgcttttgctt 91  Q
    ||||| ||||||||| |||||| ||||||||||||||||||| |||||||||  |||||| ||  | | || ||||||||||||||||||||||    
T  25481185 ctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataaaagtggtgcgcctcattatacccttttgctgcttttgctt 25481278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 25488791 - 25488884
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaac-ccttttacccttttgctgcttttgctt 91  Q
    ||||| ||||||||| |||||| ||||||||||||||||||| |||||||||  |||||| ||  | | || ||||||||||||||||||||||    
T  25488791 ctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataaaagtggtgcgcctcattatacccttttgctgcttttgctt 25488884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 19013255 - 19013119
Alignment:
Q  73 ccttttgctgcttttgcttcttcgacaaagccgcctattttagt--atttctgacctagagcccatggtttcttatgcaacaat-ttagtgatttaattc 169  Q
    ||||||| || ||||||||||| ||||| || ||||||||||||  |||||||||||| || |||||||||||| || |||| |  || |||| || |||    
T  19013255 ccttttgttgtttttgcttctttgacaa-gctgcctattttagtttatttctgacctaaagtccatggtttcttgtggaacattcctattgatgtatttc 19013157  T
Q  170 ttggggctcaagtcaatgttagactataaatagagcagc 208  Q
    |||||||| |||| | |  ||||||||||||||||||||    
T  19013156 ttggggcttaagt-agttgtagactataaatagagcagc 19013119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 19929398 - 19929441
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  19929398 catcttttgttctctgaaataataagtgacaattgtttctttga 19929441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 24371515 - 24371472
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  24371515 catcttttgttcttggaatttataagtgacaattgtttctttga 24371472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 24820675 - 24820632
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||| ||||||||||| |||||||||||||||||    
T  24820675 catcttttgttctttgaaataataagggacaattgtttctttga 24820632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24507118 - 24507171
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa 54  Q
    ||||| ||||||||| |||||| ||||||||||||||||||| ||| |||||||    
T  24507118 ctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa 24507171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 24321808 - 24321852
Alignment:
Q  225 catcttttgttcttggaaat-aataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||| |||||||||||||||||| |||||    
T  24321808 catcttttgttcttggaaattaataagtgacaattgtttatttga 24321852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 32441686 - 32441634
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata 53  Q
    ||||| ||||||||| |||||| ||||||||||||||||||| |||| |||||    
T  32441686 ctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaatatata 32441634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 539210 - 539253
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||| |  |||||||||||||||||||||||||||||    
T  539210 catcttttgttttctgaaataataagtgacaattgtttctttga 539253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 5499849 - 5499806
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||   ||||||||||||||||||||||||||||    
T  5499849 catcttttgttctctaaaataataagtgacaattgtttctttga 5499806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 24825060 - 24825017
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  ||||||||||| |||||||||||||||||    
T  24825060 catcttttgttctctgaaataataagggacaattgtttctttga 24825017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 42767448 - 42767405
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||| |  |||||||||||||||||||||||||||||    
T  42767448 catcttttgttatctgaaataataagtgacaattgtttctttga 42767405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 16134474 - 16134381
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa--gtggcgcaacccttt-tacccttttgctgcttttgctt 91  Q
    ||||| |||||||||  ||||| |||||||||||||| |||| ||| |||||||  ||||| |  ||| || ||||||||||||||||||||||    
T  16134474 ctcatacaaaaatatcatgtgcaaagaatttgaagatattgtacaataatataaaagtggcacgccccattatacccttttgctgcttttgctt 16134381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 44998027 - 44998072
Alignment:
Q  9 aaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa 54  Q
    ||||||| |||||| ||||||||||||||||||| ||| |||||||    
T  44998027 aaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa 44998072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 23140256 - 23140169
Alignment:
Q  9 aaaatatattgtgcgaagaatttgaagatcttgtgcaaaaat--ataagtggcgcaaccc-ttttacccttttgctgcttttgcttct 93  Q
    ||||||| |||||| ||||||| ||||||||||| ||| |||  | |||||||||  ||| || |||||||||||||||| |||||||    
T  23140256 aaaatatcttgtgcaaagaattcgaagatcttgtacaataataaaaaagtggcgcgccccattatacccttttgctgcttctgcttct 23140169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 23552046 - 23551959
Alignment:
Q  9 aaaatatattgtgcgaagaatttgaagatcttgtgcaaaaat--ataagtggcgcaaccc-ttttacccttttgctgcttttgcttct 93  Q
    ||||||| |||||| ||||||| ||||||||||| ||| |||  | |||||||||  ||| || |||||||||||||||| |||||||    
T  23552046 aaaatatcttgtgcaaagaattcgaagatcttgtacaataataaaaaagtggcgcgccccattatacccttttgctgcttctgcttct 23551959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44581 - 44502
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat---aagtggcgcaacccttttacccttt 77  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||  ||||||||||||||    
T  44581 ctcatgcaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgccccttttacccttt 44502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 44; Significance: 4e-16; HSPs: 5)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 23278 - 23321
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23278 catcttttgttcttggaaataataagtgacaattgtttctttga 23321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 200 - 243
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  200 catcttttgttcttggaaatattaagtgacaattgtttctttga 243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 77852 - 77893
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttcttt 266  Q
    ||||||||||| |||||||||||||||||| |||||||||||    
T  77852 catcttttgttattggaaataataagtgaccattgtttcttt 77893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 100177 - 100229
Alignment:
Q  2 tcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa 54  Q
    |||| |||||||||| ||||| ||||||||||||||||||| ||| |||||||    
T  100177 tcatacaaaaatataatgtgcaaagaatttgaagatcttgtacaataatataa 100229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 100383 - 100426
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||| ||||||||||||||    
T  100383 catcttttgttctctgaaataataagtgataattgtttctttga 100426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 268
Target Start/End: Original strand, 38447 - 38549
Alignment:
Q  167 ttcttggggctcaagtcaatgttagactataaatagagcagccatct-agttgtaaaaccatcttttgttcttggaaataataagtgacaattgtttctt 265  Q
    ||||| ||||| |||||||| ||||||||| | |||||||||||||  | || |  |  |||||||||||||||||||| ||||||||||||||||||||    
T  38447 ttcttagggcttaagtcaatattagactattagtagagcagccatcagacttatctattcatcttttgttcttggaaattataagtgacaattgtttctt 38546  T
Q  266 tga 268  Q
    |||    
T  38547 tga 38549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1559 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 1414 - 1457
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  1414 catcttttgttcttggaaataataagtgacaactgtttctttga 1457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1323 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1323
Description:

Target: scaffold1323; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 1982 - 1939
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  1982 catcttttgttctcggaaataataagtgacaattgtttctttga 1939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 2021 - 1978
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  2021 catcttttgttctcggaaataataagtgacaattgtttctttga 1978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 6432 - 6475
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  6432 catcttttgttctcggaaataataagtgacaattgtttctttga 6475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 11046 - 11089
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  11046 catcttttgttctcggaaataataagtgacaattgtttctttga 11089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 9041 - 9084
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  9041 catcttttgttctcggaaataataagtgacaattgtttctttga 9084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 9285 - 9246
Alignment:
Q  229 ttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9285 ttttgttcttggaaataataagtgacaattgtttctttga 9246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 2522 - 2565
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  2522 catcttttgttctcggaaataataagtgacaattgtttctttga 2565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 10092 - 9999
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaaccc-ttttacccttttgctgcttttgctt 91  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| ||| |||||  |||||||||  ||| || ||||||||||||||||||||||    
T  10092 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataaaagtggcgcgccccgttatacccttttgctgcttttgctt 9999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 9886 - 9842
Alignment:
Q  224 ccatcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  9886 ccatcttttgttctctgaaataataagtgacaattgtttctttga 9842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19815 - 19762
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa 54  Q
    ||||| ||||||| | |||||| |||||||||||||||||||||||||||||||    
T  19815 ctcatacaaaaatttcttgtgcaaagaatttgaagatcttgtgcaaaaatataa 19762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 3479 - 3519
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctt 265  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  3479 catcttttgttcttggaaattataagtgacaattgtttctt 3519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 3644 - 3684
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctt 265  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  3644 catcttttgttcttggaaattataagtgacaattgtttctt 3684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 61657 - 61744
Alignment:
Q  7 caaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa--gtggcgcaacccttt-tacccttttgctgcttttgctt 91  Q
    |||||||||  ||||| ||||||||||||||||||| |||||||||||  ||||| |  ||| || ||||||||||||||||||||||    
T  61657 caaaaatatcctgtgcaaagaatttgaagatcttgtacaaaaatataaaagtggcacgccccattatacccttttgctgcttttgctt 61744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 61858 - 61901
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||| ||||  |||||||||||||||||||||||||||||    
T  61858 catcttttcttctctgaaataataagtgacaattgtttctttga 61901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 3526 - 3569
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||| ||||||||||||||||||||||||||| |||||||    
T  3526 catcttttcttcttggaaataataagtgacaattgtctctttga 3569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 9166 - 9123
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  9166 catcttttgttctctgaaataataagtgacaattgtttctttga 9123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 17721 - 17678
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||    
T  17721 catctttggttctcggaaataataagtgacaattgtttctttga 17678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 21775 - 21732
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  21775 catcttttgttctctgaaataataagtgacaattgtttctttga 21732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 26922 - 26879
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  26922 catcttttgttctctgaaataataagtgacaattgtttctttga 26879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 27383 - 27426
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  27383 catcttttgttctctgaaataataagtgacaattgtttctttga 27426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 39379 - 39422
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  39379 catcttttgttctctgaaataataagtgacaattgtttctttga 39422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 19444 - 19487
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||    
T  19444 catcttttgttctcggaaataataagtgacaattggttctttga 19487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 48804 - 48847
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  48804 catcttttgttctctgaaataataagtgacaattgtttctttga 48847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 48603 - 48687
Alignment:
Q  7 caaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa--gtggcgcaacccttt-tacccttttgctgcttttg 88  Q
    |||||||||  ||||| ||||||||||||||||||| ||| |||||||  |||||||  | | || |||||||||||||||||||    
T  48603 caaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataaaagtggcgcgcctcattatacccttttgctgcttttg 48687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 18841 - 18798
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||| ||||||||||| |||||||||||||||||    
T  18841 catcttttgttctttgaaataataagggacaattgtttctttga 18798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 163991 - 163948
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  163991 catcttttgttctgtgaaataataagtgacaattgtttctttga 163948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9161 - 9109
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata 53  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| |||| |||||    
T  9161 ctcatacaaaaatataatgtgcaaagaatttgaagatcttgttcaaatatata 9109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 8935 - 8898
Alignment:
Q  231 ttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||  |||||||||||||||||||||||||||||    
T  8935 ttgttctatgaaataataagtgacaattgtttctttga 8898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 38224 - 38141
Alignment:
Q  11 aatatattgtgcgaagaatttgaagatcttgtgcaaaaatataa--gtggcgcaacccttt-tacccttttgctgcttttgctt 91  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||  ||||| |  ||| || |||||||||| |||||||||||    
T  38224 aatattttgtgcaaagaatttgaagatcttgtacaaaaatataaaagtggcacgccccattatacccttttgttgcttttgctt 38141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 38027 - 37986
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttcttt 266  Q
    |||||||||||||  | |||||||||||||||||||||||||    
T  38027 catcttttgttctctgtaataataagtgacaattgtttcttt 37986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 19020 - 18977
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||| |||||  |||||||||||||||||||||||||||||    
T  19020 catctttagttctctgaaataataagtgacaattgtttctttga 18977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 19226 - 19133
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatat--aagtggcgcaaccc-ttttacccttttgctgcttttgctt 91  Q
    ||||| |||||||||  ||||| ||||||||||||||||||  ||| |||||  |||||||||  ||| || |||| |||||||||||||||||    
T  19226 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgaacaataatataaaagtggcgcgccccattatacctttttgctgcttttgctt 19133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 48408 - 48451
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||   |||||||||||||||||||||||||||||    
T  48408 catcttttgttccctgaaataataagtgacaattgtttctttga 48451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 13735 - 13778
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||    
T  13735 catcttttgttctcggaaataaaaagtgacaattgtttatttga 13778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 33972 - 34011
Alignment:
Q  229 ttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  33972 ttttgttctctgaaataataagtgacaattgtttctttga 34011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 425103 - 425060
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttctttga 268  Q
    ||||||||||||   |||||||||||||||||||||||||||||    
T  425103 catcttttgttccctgaaataataagtgacaattgtttctttga 425060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 82685 - 82641
Alignment:
Q  225 catcttttgttcttggaaat-aataagtgacaattgtttctttga 268  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||    
T  82685 catcttttgtttttggaaattaataagtgaccattgtttctttga 82641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 168207 - 168248
Alignment:
Q  225 catcttttgttcttggaaataataagtgacaattgtttcttt 266  Q
    ||||||||||||||||||||  |||||||||||| |||||||    
T  168207 catcttttgttcttggaaattctaagtgacaattatttcttt 168248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20966 - 21018
Alignment:
Q  1 ctcatgcaaaaatatattgtgcgaagaatttgaagatcttgtgcaaaaatata 53  Q
    ||||| |||||||||  ||||| ||||||||||||||||||| |||| |||||    
T  20966 ctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 21018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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