View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20120_low_14 (Length: 269)
Name: NF20120_low_14
Description: NF20120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20120_low_14 |
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Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 29535984 - 29536227
Alignment:
| Q |
11 |
catcataaaaaaccggaagaataagtccataactcttgttttcaacgatatgagctagtacttccaaccaaaatgaagacaaagcatagttcgcagtgaa |
110 |
Q |
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| T |
29535984 |
catcataaaaaaccggaagaataagtccataactcttgttttcaacgatatgacctagtacttccaaccaaaatgaagacgaagcatagttcgcagtgaa |
29536083 |
T |
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| Q |
111 |
gacgataatggcaatcctggactcatggatgaccttgtaaagtaccggtgggatttcgtcccctttgaaaagctcctcgtcgcccataaaggtgcggatt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||| |||| |
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| T |
29536084 |
gacgataatggcaatcctggactcatggatgaccttgtaaagtaccggtgggatttcgtcccctttgaaaagctcctcatcgcacatgaaggtgctgatt |
29536183 |
T |
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| Q |
211 |
cctccttttctcagtactttgcagagatcgccagcaaaaccttt |
254 |
Q |
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| |||||| ||||||||||||||||||||||||||||||||||| |
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| T |
29536184 |
cgtcctttactcagtactttgcagagatcgccagcaaaaccttt |
29536227 |
T |
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