View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20120_low_24 (Length: 235)

Name: NF20120_low_24
Description: NF20120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20120_low_24
NF20120_low_24
[»] chr1 (21 HSPs)
chr1 (10-83)||(41085502-41085575)
chr1 (10-83)||(41090270-41090343)
chr1 (10-84)||(41903094-41903168)
chr1 (10-84)||(33196601-33196675)
chr1 (10-79)||(22667597-22667666)
chr1 (10-79)||(28712231-28712300)
chr1 (10-61)||(33486254-33486305)
chr1 (38-83)||(5799914-5799959)
chr1 (38-84)||(7427023-7427069)
chr1 (38-84)||(39628190-39628236)
chr1 (38-84)||(49685983-49686029)
chr1 (38-83)||(36671928-36671973)
chr1 (38-83)||(46152530-46152575)
chr1 (38-82)||(477797-477841)
chr1 (38-82)||(9223218-9223262)
chr1 (10-82)||(12979583-12979655)
chr1 (38-82)||(14131712-14131756)
chr1 (19-79)||(26922019-26922079)
chr1 (38-82)||(43225008-43225052)
chr1 (10-85)||(48355046-48355122)
chr1 (38-82)||(48977239-48977283)
[»] chr8 (13 HSPs)
chr8 (10-83)||(16871898-16871971)
chr8 (10-82)||(24247434-24247506)
chr8 (10-82)||(33628363-33628435)
chr8 (10-83)||(36496480-36496553)
chr8 (10-82)||(43065260-43065333)
chr8 (36-84)||(2164750-2164798)
chr8 (10-79)||(3642679-3642748)
chr8 (10-82)||(31940232-31940304)
chr8 (38-84)||(9179150-9179196)
chr8 (10-68)||(19725060-19725118)
chr8 (46-80)||(34714346-34714380)
chr8 (38-82)||(2261029-2261073)
chr8 (38-82)||(29565712-29565756)
[»] chr6 (8 HSPs)
chr6 (10-83)||(22734704-22734777)
chr6 (10-80)||(31394191-31394261)
chr6 (10-80)||(32715606-32715676)
chr6 (38-84)||(1705604-1705649)
chr6 (38-84)||(6016167-6016213)
chr6 (38-83)||(9686775-9686820)
chr6 (38-83)||(21181138-21181182)
chr6 (38-82)||(8549917-8549961)
[»] chr4 (23 HSPs)
chr4 (10-82)||(30839578-30839650)
chr4 (10-80)||(52104742-52104812)
chr4 (10-82)||(23390499-23390571)
chr4 (19-81)||(25814722-25814784)
chr4 (10-83)||(40318995-40319068)
chr4 (10-80)||(4150452-4150522)
chr4 (46-83)||(52760158-52760195)
chr4 (10-82)||(50716231-50716303)
chr4 (10-84)||(4540893-4540968)
chr4 (15-82)||(46548375-46548441)
chr4 (10-79)||(54851043-54851112)
chr4 (36-84)||(1182588-1182636)
chr4 (10-79)||(48254279-48254344)
chr4 (19-82)||(54505910-54505973)
chr4 (46-84)||(16917217-16917255)
chr4 (10-80)||(22413562-22413632)
chr4 (50-80)||(28013387-28013417)
chr4 (38-84)||(45629106-45629152)
chr4 (38-83)||(12756001-12756045)
chr4 (38-83)||(21514988-21515033)
chr4 (54-83)||(30951480-30951509)
chr4 (38-83)||(46222357-46222402)
chr4 (10-79)||(49144276-49144345)
[»] chr3 (11 HSPs)
chr3 (10-82)||(43744559-43744631)
chr3 (19-83)||(542361-542427)
chr3 (10-84)||(54830819-54830893)
chr3 (10-82)||(52458274-52458346)
chr3 (38-84)||(33830528-33830574)
chr3 (38-84)||(48925774-48925820)
chr3 (10-83)||(52179294-52179366)
chr3 (38-82)||(2679780-2679824)
chr3 (10-82)||(19608294-19608365)
chr3 (52-80)||(25558354-25558382)
chr3 (38-82)||(32719985-32720029)
[»] chr2 (15 HSPs)
chr2 (10-82)||(2639915-2639987)
chr2 (29-83)||(6279876-6279930)
chr2 (38-82)||(29943529-29943573)
chr2 (10-70)||(29943568-29943628)
chr2 (38-82)||(36023588-36023632)
chr2 (38-84)||(11598112-11598158)
chr2 (36-82)||(13118817-13118863)
chr2 (38-84)||(35896775-35896821)
chr2 (38-84)||(37725549-37725595)
chr2 (38-84)||(40533249-40533295)
chr2 (38-84)||(44544043-44544089)
chr2 (10-79)||(5156019-5156088)
chr2 (38-83)||(6657442-6657487)
chr2 (38-83)||(21425211-21425256)
chr2 (38-82)||(490096-490140)
[»] chr5 (12 HSPs)
chr5 (10-82)||(231499-231571)
chr5 (10-83)||(14054410-14054483)
chr5 (10-68)||(11489922-11489980)
chr5 (38-84)||(14575835-14575881)
chr5 (38-84)||(22798433-22798479)
chr5 (38-84)||(25684071-25684117)
chr5 (10-56)||(32092107-32092153)
chr5 (38-83)||(972149-972194)
chr5 (36-76)||(23189428-23189468)
chr5 (38-82)||(28332120-28332164)
chr5 (38-82)||(37314200-37314244)
chr5 (38-82)||(41609086-41609130)
[»] chr7 (14 HSPs)
chr7 (10-80)||(27275778-27275848)
chr7 (29-80)||(37476805-37476856)
chr7 (10-83)||(30819450-30819523)
chr7 (10-80)||(19503453-19503522)
chr7 (38-83)||(1282184-1282229)
chr7 (38-83)||(15090667-15090712)
chr7 (10-83)||(15877073-15877145)
chr7 (31-84)||(23574364-23574417)
chr7 (10-83)||(24202863-24202936)
chr7 (31-84)||(28501694-28501747)
chr7 (38-82)||(6791800-6791844)
chr7 (38-82)||(24008995-24009039)
chr7 (38-82)||(24505123-24505167)
chr7 (38-82)||(47219956-47220000)
[»] scaffold0190 (1 HSPs)
scaffold0190 (38-84)||(6061-6107)
[»] scaffold0059 (1 HSPs)
scaffold0059 (38-84)||(71056-71102)
[»] scaffold0022 (1 HSPs)
scaffold0022 (38-83)||(166780-166825)
[»] scaffold0239 (1 HSPs)
scaffold0239 (38-82)||(15380-15424)
[»] scaffold0184 (1 HSPs)
scaffold0184 (38-82)||(16945-16989)
[»] scaffold0078 (1 HSPs)
scaffold0078 (38-82)||(55855-55899)
[»] scaffold0005 (1 HSPs)
scaffold0005 (38-82)||(291623-291667)


Alignment Details
Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 41085575 - 41085502
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    |||| ||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41085575 tcattaaactattcatttaacatatggatgtaccggtacactcaattttattgagtgtaccatagaaattgcct 41085502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 41090343 - 41090270
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    |||| ||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41090343 tcattaaactattcatttaacatatggatgtaccggtacactcaattttattgagtgtaccatagaaattgcct 41090270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 41903168 - 41903094
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    |||| ||| ||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41903168 tcattaaactattcatttaacatatgaatgtaccgatacattcaattttattgagtgtaccatagaaattgccta 41903094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 33196601 - 33196675
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    |||| ||| |||| ||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  33196601 tcattaaactatttatttaacatatggatgtaccggtacactcaattttattgagcgtaccatagaaattgccta 33196675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 22667597 - 22667666
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaatt 79  Q
    |||| ||| |||||| ||||||||| | ||||| | ||||||||||||||||||||||||||||||||||    
T  22667597 tcattaaactattcaattaacatatgggtgtactggtacactcaattttattgagtgtaccatagaaatt 22667666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 28712231 - 28712300
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaatt 79  Q
    |||| ||| ||||||||||||||||   ||||||| || |||||||||||||||||||||||||||||||    
T  28712231 tcattaaactattcatttaacatatgagtgtaccggtatactcaattttattgagtgtaccatagaaatt 28712300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 33486254 - 33486305
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttatt 61  Q
    |||| ||| |||||||||||||||| |||||||| |||||||||||||||||    
T  33486254 tcattaaactattcatttaacatatggatgtaccaatacactcaattttatt 33486305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 5799959 - 5799914
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||    
T  5799959 tgtaccgatacactcaaaattatcgagtgtaccatagaaattgcct 5799914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 7427023 - 7427069
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||||    
T  7427023 tgtaccgatacacccaaatttattgggtgtaccatagaatttgccta 7427069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 39628190 - 39628236
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    |||||||||||||| ||  |||| |||||||||||||||||||||||    
T  39628190 tgtaccgatacacttaaaattatcgagtgtaccatagaaattgccta 39628236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 49686029 - 49685983
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||||    
T  49686029 tgtaccgatacacccaaatttattgggtgtaccatagaatttgccta 49685983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 36671973 - 36671928
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    ||||||| |||||||||  |||| ||||||||||||||||||||||    
T  36671973 tgtaccggtacactcaaaattatcgagtgtaccatagaaattgcct 36671928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 46152530 - 46152575
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    ||||||| |||||||||  |||| ||||||||||||||||||||||    
T  46152530 tgtaccggtacactcaaaattatcgagtgtaccatagaaattgcct 46152575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 477797 - 477841
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||||||| | ||||| ||||||||||||| |||||    
T  477797 tgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 477841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 9223218 - 9223262
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||    
T  9223218 tgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 9223262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 12979655 - 12979583
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    |||| ||| |||| |||||| || ||| ||||||| | |||| |||||| ||||||||||| |||||||||||    
T  12979655 tcattaaactattaatttaatatgtaggtgtaccggtgcacttaattttgttgagtgtaccgtagaaattgcc 12979583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 14131712 - 14131756
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||    
T  14131712 tgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 14131756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 26922019 - 26922079
Alignment:
Q  19 tattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaatt 79  Q
    |||| |||||| || ||| ||||||| | ||||||||||| ||||||||||| ||||||||    
T  26922019 tattaatttaatatgtaggtgtaccggtgcactcaattttgttgagtgtaccgtagaaatt 26922079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 43225008 - 43225052
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||    
T  43225008 tgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 43225052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 48355046 - 48355122
Alignment:
Q  10 tcatcaaaatattcatttaacat-atagatgtaccgatacactcaattttattgagtgtaccatagaaattgcctag 85  Q
    |||| ||| ||||||||||| || |||| ||||||  ||||||||| ||| |||||| |||| ||||||||||||||    
T  48355046 tcattaaactattcatttaatattataggtgtaccagtacactcaacttttttgagtataccgtagaaattgcctag 48355122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 48977239 - 48977283
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||| ||||||||| | ||||||||||||||||||| |||||    
T  48977239 tgtaccggtacactcaaatatattgagtgtaccatagaatttgcc 48977283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 16871898 - 16871971
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    |||| ||| |||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||    
T  16871898 tcattaaactattcatttaacatatgggtgtaccggtacactcaattttattgagtgtaccatagaaattgcct 16871971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 24247506 - 24247434
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    |||| ||| |||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||    
T  24247506 tcattaaactattcatttaacatatgggtgtaccggtacactcaattttattgagtgtaccatagaaattgcc 24247434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 33628435 - 33628363
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    |||| ||| |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||    
T  33628435 tcattaaactattcatttaacatatgggtgtaccgatacactcaattttattgaatgtaccatagaaattgcc 33628363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 36496480 - 36496553
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    |||| ||| ||||||||||| |||||| ||||||| |||| |||||||| ||||||||||| ||||||||||||    
T  36496480 tcattaaactattcatttaatatataggtgtaccggtacattcaatttttttgagtgtaccgtagaaattgcct 36496553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 43065260 - 43065333
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaa-ttttattgagtgtaccatagaaattgcc 82  Q
    |||| ||| |||||||||||||||| | ||||||| ||||||||| |||||||||||||||| |||||||||||    
T  43065260 tcattaaactattcatttaacatatgggtgtaccggtacactcaatttttattgagtgtaccgtagaaattgcc 43065333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 2164798 - 2164750
Alignment:
Q  36 gatgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||||||    
T  2164798 gatgtaccggtacactcaaaattattgagtgtaccatagaaattgccta 2164750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 3642748 - 3642679
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaatt 79  Q
    |||| ||| |||| |||||| || ||| ||||||||| ||||||||||| ||||||||||| ||||||||    
T  3642748 tcattaaactattaatttaatatgtaggtgtaccgatgcactcaattttgttgagtgtaccgtagaaatt 3642679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 31940304 - 31940232
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    |||| ||| ||||||||||| |||||| ||||||| |||||| || ||| ||||||||||| || ||||||||    
T  31940304 tcattaaactattcatttaatatataggtgtaccggtacacttaaattttttgagtgtaccgtaaaaattgcc 31940232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 9179150 - 9179196
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||||    
T  9179150 tgtaccgttacactcaaaattatcgagtgtaccatagaaattgccta 9179196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 19725118 - 19725060
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgta 68  Q
    |||| ||| |||| |||||| |||||| ||||||| ||||||||||||| |||||||||    
T  19725118 tcattaaactattaatttaatatataggtgtaccggtacactcaattttgttgagtgta 19725060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 34714380 - 34714346
Alignment:
Q  46 tacactcaattttattgagtgtaccatagaaattg 80  Q
    |||||||||||||||| ||||||||||||||||||    
T  34714380 tacactcaattttattaagtgtaccatagaaattg 34714346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 2261073 - 2261029
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||| ||||||||| | ||||||||||||||||||| |||||    
T  2261073 tgtaccggtacactcaaatatattgagtgtaccatagaatttgcc 2261029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 29565712 - 29565756
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||    
T  29565712 tgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 29565756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 22734777 - 22734704
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    |||| ||| |||||||||||||||| | |||||| |||||||||||||||||||||||||| ||||||||||||    
T  22734777 tcattaaactattcatttaacatatgggtgtacctatacactcaattttattgagtgtaccgtagaaattgcct 22734704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 31394261 - 31394191
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattg 80  Q
    |||| ||| |||| ||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||    
T  31394261 tcattaaactatttatttaacatatggatgtaccgatacactcaattttattaaatgtaccatagaaattg 31394191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 32715676 - 32715606
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattg 80  Q
    |||| ||| ||||||||||| |||| ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  32715676 tcattaaactattcatttaatatatggatgtaccggtacactcaatttttttgaatgtaccatagaaattg 32715606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 1705649 - 1705604
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  1705649 tgtaccgatacactcaaattt-ttgagtgtaccatagaatttgccta 1705604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 6016167 - 6016213
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    |||||||||||| |||| ||||||| ||||||||||||| |||||||    
T  6016167 tgtaccgatacattcaaatttattgggtgtaccatagaatttgccta 6016213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 9686820 - 9686775
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    ||||| ||||||||||| | ||||||||||||||||||| ||||||    
T  9686820 tgtactgatacactcaaatatattgagtgtaccatagaatttgcct 9686775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 21181182 - 21181138
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||||    
T  21181182 tgtaccgatacactcaaattt-ttgagtgtaccatagaatttgcct 21181138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 8549917 - 8549961
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||||||| | ||||| ||||||||||||| |||||    
T  8549917 tgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 8549961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 30839578 - 30839650
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    |||| ||| |||||||||||||||| | ||||||| ||||||||| |||||||||||||||||||||||||||    
T  30839578 tcattaaactattcatttaacatatgggtgtaccggtacactcaaatttattgagtgtaccatagaaattgcc 30839650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 52104742 - 52104812
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattg 80  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||||||||| ||||  ||||||||||    
T  52104742 tcattaaactattcatttaacatatagatgtaccggtacactcaattttattgaatgtattatagaaattg 52104812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 23390571 - 23390499
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    |||| ||| ||||||||||| |||| | ||||||| |||||||||||||||||||||||||||| ||||||||    
T  23390571 tcattaaactattcatttaatatatgggtgtaccggtacactcaattttattgagtgtaccatataaattgcc 23390499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 25814722 - 25814784
Alignment:
Q  19 tattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgc 81  Q
    |||||||||||||||| | ||||||| ||||||||||||||| || |||||||||||||||||    
T  25814722 tattcatttaacatatgggtgtaccggtacactcaattttatcgaatgtaccatagaaattgc 25814784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 40319068 - 40318995
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    |||| ||| ||||||||||| |||| | ||||||  |||||||||||||||||| |||||||||||||||||||    
T  40319068 tcattaaactattcatttaatatatgggtgtaccagtacactcaattttattgaatgtaccatagaaattgcct 40318995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 4150452 - 4150522
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattg 80  Q
    |||| ||| ||||| |||||||||| | ||||||| |||||||||||||||||||||||  ||||||||||    
T  4150452 tcattaaactattcgtttaacatatgggtgtaccggtacactcaattttattgagtgtattatagaaattg 4150522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 83
Target Start/End: Original strand, 52760158 - 52760195
Alignment:
Q  46 tacactcaattttattgagtgtaccatagaaattgcct 83  Q
    ||||||||||||||||||||||||||||||||||||||    
T  52760158 tacactcaattttattgagtgtaccatagaaattgcct 52760195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 50716303 - 50716231
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    |||| ||| ||||||||||| |||| | ||||||| ||||||||||||| || |||||||| |||||||||||    
T  50716303 tcattaaactattcatttaatatatgggtgtaccggtacactcaatttttttaagtgtaccgtagaaattgcc 50716231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 4540893 - 4540968
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaa-ttttattgagtgtaccatagaaattgccta 84  Q
    |||| ||| ||||||||||| |||| | ||||||| ||||||||| |||| ||||||||||| |||||||||||||    
T  4540893 tcattaaactattcatttaatatatgggtgtaccggtacactcaattttttttgagtgtaccgtagaaattgccta 4540968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 46548441 - 46548375
Alignment:
Q  15 aaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    |||||||||||| || |||| | ||||||| ||||||||||||| ||||||||||| |||||||||||    
T  46548441 aaaatattcatt-aatatatgggtgtaccggtacactcaatttttttgagtgtaccgtagaaattgcc 46548375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 54851112 - 54851043
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaatt 79  Q
    |||| ||| ||||||||||| |||| | ||||| | ||||||||||||| ||||||||||| ||||||||    
T  54851112 tcattaaactattcatttaatatatgggtgtactggtacactcaatttttttgagtgtaccgtagaaatt 54851043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 1182636 - 1182588
Alignment:
Q  36 gatgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||||| |||||||||  |||| |||||||||||||||||||||||    
T  1182636 gatgtaccggtacactcaaaattatcgagtgtaccatagaaattgccta 1182588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 48254279 - 48254344
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaatt 79  Q
    |||| ||| |||||||||||||||| | | ||||||||||||    ||||||||||||||||||||||||    
T  48254279 tcattaaactattcatttaacatatgggtataccgatacact----tttattgagtgtaccatagaaatt 48254344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 54505910 - 54505973
Alignment:
Q  19 tattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    |||| |||||||| || | ||||||||||||| ||| ||||||| ||||||||||||| |||||    
T  54505910 tattaatttaacaaattggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 54505973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 16917255 - 16917217
Alignment:
Q  46 tacactcaattttattgagtgtaccatagaaattgccta 84  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  16917255 tacactcaaaattattgagtgtaccatagaaattgccta 16917217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 22413632 - 22413562
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattg 80  Q
    |||| ||| |||| |||||| || ||| ||||||| | ||||||||||| ||||||||||| |||||||||    
T  22413632 tcattaaactattaatttaatatgtaggtgtaccggtgcactcaattttgttgagtgtaccgtagaaattg 22413562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 80
Target Start/End: Original strand, 28013387 - 28013417
Alignment:
Q  50 ctcaattttattgagtgtaccatagaaattg 80  Q
    |||||||||||||||||||||||||||||||    
T  28013387 ctcaattttattgagtgtaccatagaaattg 28013417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 45629152 - 45629106
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||||    
T  45629152 tgtaccgatacacccaaatttattgggtgtaccatagaatttgccta 45629106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 12756045 - 12756001
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||||    
T  12756045 tgtaccgatacactcaaattt-ttgagtgtaccatagaatttgcct 12756001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 21515033 - 21514988
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    ||||||||||||| ||| ||||||| ||||||||||||| ||||||    
T  21515033 tgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 21514988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 83
Target Start/End: Original strand, 30951480 - 30951509
Alignment:
Q  54 attttattgagtgtaccatagaaattgcct 83  Q
    ||||||||||||||||||||||||||||||    
T  30951480 attttattgagtgtaccatagaaattgcct 30951509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 46222357 - 46222402
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    ||||||||||||| ||| ||||||| ||||||||||||| ||||||    
T  46222357 tgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 46222402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 49144276 - 49144345
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaatt 79  Q
    |||| ||| |||| |||||| || ||| ||||||| | ||||||||||| ||||||||||| ||||||||    
T  49144276 tcattaaactattaatttaatatgtaggtgtaccggtgcactcaattttgttgagtgtaccgtagaaatt 49144345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 43744559 - 43744631
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    |||| ||| ||||||||||||||||  ||||||||||||| |||| |||||||||||||||||||||||||||    
T  43744559 tcattaaattattcatttaacatatgaatgtaccgatacattcaaatttattgagtgtaccatagaaattgcc 43744631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 542427 - 542361
Alignment:
Q  19 tattcatttaacatata--gatgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    |||||||||||||||||  | ||||||| ||||||||||||||||||||||||||||||||||||||    
T  542427 tattcatttaacatatatgggtgtaccggtacactcaattttattgagtgtaccatagaaattgcct 542361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 54830893 - 54830819
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    |||| ||| ||||||||||| |||| | ||||||| || ||||||||||||||||||||||||||||||||||||    
T  54830893 tcattaaactattcatttaatatatgggtgtaccggtatactcaattttattgagtgtaccatagaaattgccta 54830819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 52458274 - 52458346
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    |||| ||| |||| |||||| |||| | |||| || ||||||||||||| ||||||||||| |||||||||||    
T  52458274 tcattaaactatttatttaatatatgggtgtagcggtacactcaatttttttgagtgtaccgtagaaattgcc 52458346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 33830574 - 33830528
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||||    
T  33830574 tgtaccgatacacccaaatttattgggtgtaccatagaatttgccta 33830528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 48925774 - 48925820
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    |||||||||||| |||| ||||||| ||||||||||||| |||||||    
T  48925774 tgtaccgatacattcaaatttattgggtgtaccatagaatttgccta 48925820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 52179294 - 52179366
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    |||| ||| |||| |||||| |||||| ||||||  ||||||||| ||| | ||||||||||||||||||||||    
T  52179294 tcattaaactattaatttaa-atataggtgtaccagtacactcaaatttttcgagtgtaccatagaaattgcct 52179366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 2679780 - 2679824
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||    
T  2679780 tgtaccggtacactcaaaattatcgagtgtaccatagaaattgcc 2679824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 19608365 - 19608294
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    |||| ||| |||| |||||| |||||| ||||||| |||| |||| ||| | |||||||||||||||||||||    
T  19608365 tcattaaactattaatttaa-atataggtgtaccggtacattcaaatttttcgagtgtaccatagaaattgcc 19608294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 80
Target Start/End: Complemental strand, 25558382 - 25558354
Alignment:
Q  52 caattttattgagtgtaccatagaaattg 80  Q
    |||||||||||||||||||||||||||||    
T  25558382 caattttattgagtgtaccatagaaattg 25558354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 32720029 - 32719985
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||    
T  32720029 tgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 32719985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 2639987 - 2639915
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    |||| ||| |||||||||||||||| | |||||| ||||||||||||||||||||||||||||| ||||||||    
T  2639987 tcattaaactattcatttaacatatgggtgtacctatacactcaattttattgagtgtaccataaaaattgcc 2639915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 6279876 - 6279930
Alignment:
Q  29 acatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    |||||||| ||||||| |||||||||||||||||||||||||||| |||||||||    
T  6279876 acatataggtgtaccggtacactcaattttattgagtgtaccataaaaattgcct 6279930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 29943573 - 29943529
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||    
T  29943573 tgtaccgatacactcaatttttttgagtgtaccgtaaaaattgcc 29943529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 29943628 - 29943568
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtacc 70  Q
    |||| ||| ||||||||||| |||| | ||||||| ||||||||||||| |||||||||||    
T  29943628 tcattaaactattcatttaatatatgggtgtaccggtacactcaatttttttgagtgtacc 29943568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 36023632 - 36023588
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||    
T  36023632 tgtaccggtacactcaaaattattgagtgtaccatagaaattgcc 36023588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 11598158 - 11598112
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    |||||| |||||||||| ||| ||||||||||||||||| |||||||    
T  11598158 tgtaccaatacactcaaattttttgagtgtaccatagaatttgccta 11598112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 13118863 - 13118817
Alignment:
Q  36 gatgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||| |||||||||  |||| |||||||||||||||||||||    
T  13118863 gatgtaccggtacactcaaaattatcgagtgtaccatagaaattgcc 13118817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 35896775 - 35896821
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  35896775 tgtaccggtacactcaaatatattgagtgtaccatagaatttgccta 35896821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 37725595 - 37725549
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||||    
T  37725595 tgtaccgatacacccaaatttattgggtgtaccatagaatttgccta 37725549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 40533295 - 40533249
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||||    
T  40533295 tgtaccgatacacccaaatttattgggtgtaccatagaatttgccta 40533249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 44544089 - 44544043
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||||    
T  44544089 tgtaccggtacactcaaaattatcgagtgtaccatagaaattgccta 44544043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 5156019 - 5156088
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaatt 79  Q
    |||| ||| |||| |||||| || ||||||||||| | ||||||||||| ||||||||| | ||||||||    
T  5156019 tcattaaactattaatttaatatgtagatgtaccggtgcactcaattttgttgagtgtatcgtagaaatt 5156088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 6657487 - 6657442
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    ||||||||||||| ||| || |||||||||||||||||| ||||||    
T  6657487 tgtaccgatacacccaaattcattgagtgtaccatagaatttgcct 6657442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 21425256 - 21425211
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    ||||||||||||| ||| ||||||| ||||||||||||| ||||||    
T  21425256 tgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 21425211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 490096 - 490140
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||    
T  490096 tgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 490140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 231571 - 231499
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    |||| ||| |||| |||||| |||| ||||||||  |||||||||||||||||||||||||||||||||||||    
T  231571 tcattaaactattaatttaatatatggatgtaccagtacactcaattttattgagtgtaccatagaaattgcc 231499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 14054483 - 14054410
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    |||| ||| |||||||||||||||| | | ||||  ||| ||||||||||||||||||||||||||||||||||    
T  14054483 tcattaaactattcatttaacatatgggtataccagtacgctcaattttattgagtgtaccatagaaattgcct 14054410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 11489922 - 11489980
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgta 68  Q
    |||| ||| ||||||||||||||||   ||||||| |||||||||||||||||||||||    
T  11489922 tcattaaactattcatttaacatatgagtgtaccggtacactcaattttattgagtgta 11489980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 14575835 - 14575881
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    |||||||||||||||||  |||| |||||||||||||||||| ||||    
T  14575835 tgtaccgatacactcaaaattatcgagtgtaccatagaaattaccta 14575881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 22798433 - 22798479
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||||    
T  22798433 tgtaccgatacacccaaatttattgggtgtaccatagaatttgccta 22798479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 25684117 - 25684071
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||||    
T  25684117 tgtaccgatacacccaaatttattgggtgtaccatagaatttgccta 25684071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 32092153 - 32092107
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaatt 56  Q
    |||||||| |||||||||||||||| | ||||||| |||||||||||    
T  32092153 tcatcaaattattcatttaacatatgggtgtaccggtacactcaatt 32092107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 972194 - 972149
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    ||||||| |||||||||  |||| ||||||||||||||||||||||    
T  972194 tgtaccggtacactcaaaattatcgagtgtaccatagaaattgcct 972149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 23189428 - 23189468
Alignment:
Q  36 gatgtaccgatacactcaattttattgagtgtaccatagaa 76  Q
    ||||||||||||||| ||| ||||||| |||||||||||||    
T  23189428 gatgtaccgatacacccaaatttattgggtgtaccatagaa 23189468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 28332164 - 28332120
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    |||||| |||||||||| ||| ||||||||||||||||| |||||    
T  28332164 tgtaccaatacactcaaattttttgagtgtaccatagaatttgcc 28332120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 37314200 - 37314244
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||    
T  37314200 tgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 37314244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 41609130 - 41609086
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||    
T  41609130 tgtaccggtacactcaaaattatcgagtgtaccatagaaattgcc 41609086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 27275848 - 27275778
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattg 80  Q
    |||| ||| |||||||||||||||| | ||| | | |||||||||||||||||||||||||||||||||||    
T  27275848 tcattaaactattcatttaacatatgggtgtgctggtacactcaattttattgagtgtaccatagaaattg 27275778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 37476856 - 37476805
Alignment:
Q  29 acatatagatgtaccgatacactcaattttattgagtgtaccatagaaattg 80  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||||||||    
T  37476856 acatatgggtgtaccggtacactcaattttattgagtgtaccatagaaattg 37476805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 30819523 - 30819450
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    |||| ||| |||| |||||| || ||| ||||||| | ||||||||||| ||||||||||| ||||||||||||    
T  30819523 tcattaaactattaatttaatatgtaggtgtaccggtgcactcaattttgttgagtgtaccgtagaaattgcct 30819450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 19503453 - 19503522
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattg 80  Q
    |||| ||| |||| |||||| |||||| |||||||||||||||||  || | |||||||||||||||||||    
T  19503453 tcattaaactattaatttaa-atataggtgtaccgatacactcaaacttttcgagtgtaccatagaaattg 19503522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 1282229 - 1282184
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    ||||||||||||| ||| ||||||| ||||||||||||| ||||||    
T  1282229 tgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 1282184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 15090712 - 15090667
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    ||||||||||||| ||| ||||||| ||||||||||||| ||||||    
T  15090712 tgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 15090667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 15877145 - 15877073
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    |||| ||| |||| |||||| |||||| ||||||| ||||||||| ||| | || |||||||||||||||||||    
T  15877145 tcattaaactattaatttaa-atataggtgtaccggtacactcaaatttttcgaatgtaccatagaaattgcct 15877073  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 23574417 - 23574364
Alignment:
Q  31 atatagatgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    |||||| |||| || ||||||||| ||| | |||||||||||||||||||||||    
T  23574417 atataggtgtagcggtacactcaaatttttcgagtgtaccatagaaattgccta 23574364  T

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Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 24202936 - 24202863
Alignment:
Q  10 tcatcaaaatattcatttaacatatagatgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    |||| ||| |||| |||||| || ||| ||||||  | ||||||||||| ||||||||||| ||||||||||||    
T  24202936 tcattaaactattaatttaatatgtaggtgtaccactgcactcaattttgttgagtgtaccgtagaaattgcct 24202863  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 28501694 - 28501747
Alignment:
Q  31 atatagatgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    |||||| |||| || ||||||||| ||| | |||||||||||||||||||||||    
T  28501694 atataggtgtagcggtacactcaaatttttcgagtgtaccatagaaattgccta 28501747  T

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Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 6791800 - 6791844
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||||||| | ||||| ||||||||||||| |||||    
T  6791800 tgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 6791844  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 24009039 - 24008995
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||    
T  24009039 tgtaccggtacactcaaaattatcgagtgtaccatagaaattgcc 24008995  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 24505167 - 24505123
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||    
T  24505167 tgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 24505123  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 47220000 - 47219956
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||    
T  47220000 tgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 47219956  T

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Target: scaffold0190 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 6061 - 6107
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||||    
T  6061 tgtaccggtacactcaaaattatcgagtgtaccatagaaattgccta 6107  T

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Target: scaffold0059 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 71056 - 71102
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgccta 84  Q
    ||||||| |||||||||  |||| |||||||||||||||||||||||    
T  71056 tgtaccggtacactcaaaattatcgagtgtaccatagaaattgccta 71102  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 166780 - 166825
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcct 83  Q
    ||||||||||||| ||| |||||||| |||||||||||| ||||||    
T  166780 tgtaccgatacacccaaatttattgaatgtaccatagaatttgcct 166825  T

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Target: scaffold0239 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 15424 - 15380
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||| ||| ||||||| ||||||||||||| |||||    
T  15424 tgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 15380  T

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Target: scaffold0184 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 16945 - 16989
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||||||| | ||||| ||||||||||||| |||||    
T  16945 tgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 16989  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 55899 - 55855
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||||||| | ||||| ||||||||||||| |||||    
T  55899 tgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 55855  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 291667 - 291623
Alignment:
Q  38 tgtaccgatacactcaattttattgagtgtaccatagaaattgcc 82  Q
    ||||||||||||| ||| |||||||| |||||||||||| |||||    
T  291667 tgtaccgatacacccaaatttattgaatgtaccatagaatttgcc 291623  T

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