View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20121_high_2 (Length: 465)
Name: NF20121_high_2
Description: NF20121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20121_high_2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 432; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 18 - 465
Target Start/End: Original strand, 25507606 - 25508053
Alignment:
| Q |
18 |
acttagaggcataatcaaactaaacatggaaactaaatcgatgctgatcatttctagcttgttgctcatcttttgtataatactattcgataggatcttc |
117 |
Q |
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| T |
25507606 |
acttagaggcataatcaaactaaacatggaaactaaatcgatgctgatcatttctagcttgttgctcatcttttgtataatactattcgataggatcttc |
25507705 |
T |
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| Q |
118 |
agcaagtgcaagtcaacactgaagtttaattccttgaggagccttaatttttcctctacactaatcctagaaaccacaatttgctttatgattgtcctac |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
25507706 |
agcaagtgcaagtcaacactgaagtttaattccttgaggagccttaatttttcctctacactaatcctagaaaccacaatttgctttttgattgtcctac |
25507805 |
T |
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| Q |
218 |
tatgatgaataggattcttaactctcccaattgttcccatgttaccgtagaagattgtcattgacaattcaatattgaagtccaaatgtggtaggacata |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25507806 |
tatgatgaataggattcttaactctcccaattgttcccatgttatcgtagaagattgtcattgacaattcaatattgaagtccaaatgtggtaggacata |
25507905 |
T |
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| Q |
318 |
aacctgccactgcaccacccttgcaaatcatggtgtgtattttgattctacaagtttcctcgcacaaaagtgaaggagtcctatttagattttctatcta |
417 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25507906 |
aacctgccactgcaccacccttgcaaatcatggtttgtattttgattctacaagtttcctcgcacaaaagtgaaggagtcctatttagattttctatcta |
25508005 |
T |
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| Q |
418 |
ccactgaatcagccgaatctgcacctgagtacacctctgatcctttat |
465 |
Q |
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| T |
25508006 |
ccactgaatcagccgaatctgcacctgagtacacctccgatcctttat |
25508053 |
T |
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