View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20124_low_14 (Length: 236)

Name: NF20124_low_14
Description: NF20124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20124_low_14
NF20124_low_14
[»] chr6 (12 HSPs)
chr6 (97-224)||(34873028-34873156)
chr6 (1-94)||(1376458-1376551)
chr6 (1-94)||(1384206-1384299)
chr6 (10-92)||(13423069-13423151)
chr6 (1-89)||(27612966-27613054)
chr6 (10-89)||(33651121-33651200)
chr6 (1-94)||(28630190-28630283)
chr6 (1-94)||(31869159-31869252)
chr6 (29-94)||(9082950-9083015)
chr6 (33-93)||(16337142-16337202)
chr6 (112-156)||(9919200-9919244)
chr6 (32-92)||(31760176-31760236)
[»] chr1 (21 HSPs)
chr1 (1-95)||(12999708-12999802)
chr1 (1-94)||(30973644-30973737)
chr1 (1-92)||(49931645-49931736)
chr1 (1-95)||(33076211-33076305)
chr1 (1-94)||(30536081-30536172)
chr1 (1-87)||(49446687-49446777)
chr1 (10-85)||(49020301-49020376)
chr1 (2-87)||(34817938-34818023)
chr1 (10-87)||(29359844-29359921)
chr1 (12-94)||(26501173-26501255)
chr1 (1-95)||(11947887-11947981)
chr1 (17-87)||(29877405-29877475)
chr1 (10-87)||(30745087-30745164)
chr1 (10-87)||(30766538-30766615)
chr1 (26-88)||(4629641-4629703)
chr1 (18-96)||(30519509-30519587)
chr1 (17-87)||(32831061-32831131)
chr1 (10-53)||(36750412-36750455)
chr1 (3-54)||(49570090-49570141)
chr1 (27-97)||(11597754-11597824)
chr1 (3-39)||(44517903-44517939)
[»] chr3 (28 HSPs)
chr3 (1-94)||(49761073-49761166)
chr3 (1-94)||(37894128-37894221)
chr3 (1-92)||(48944599-48944690)
chr3 (1-94)||(52100352-52100445)
chr3 (1-93)||(16479724-16479816)
chr3 (3-90)||(23868869-23868956)
chr3 (1-95)||(33796358-33796452)
chr3 (10-87)||(1436917-1436994)
chr3 (10-87)||(51698959-51699036)
chr3 (13-94)||(52485576-52485657)
chr3 (2-95)||(54099242-54099335)
chr3 (2-87)||(36755944-36756029)
chr3 (17-94)||(45186438-45186515)
chr3 (1-60)||(45657690-45657749)
chr3 (3-95)||(26772462-26772555)
chr3 (1-95)||(34592156-34592250)
chr3 (2-94)||(35376968-35377060)
chr3 (3-94)||(29780991-29781082)
chr3 (2-53)||(49021804-49021855)
chr3 (2-53)||(52714826-52714877)
chr3 (1-78)||(26550329-26550406)
chr3 (13-85)||(36907144-36907216)
chr3 (1-42)||(48287763-48287804)
chr3 (10-50)||(5527444-5527484)
chr3 (10-86)||(47742383-47742459)
chr3 (59-91)||(51771354-51771386)
chr3 (27-95)||(52089820-52089888)
chr3 (10-42)||(52963254-52963286)
[»] chr8 (25 HSPs)
chr8 (1-94)||(33539497-33539590)
chr8 (1-97)||(43715966-43716062)
chr8 (1-93)||(25830133-25830225)
chr8 (1-95)||(67046-67140)
chr8 (1-95)||(35792130-35792224)
chr8 (1-95)||(12656014-12656108)
chr8 (2-87)||(6440174-6440259)
chr8 (2-95)||(3270766-3270859)
chr8 (10-87)||(35067261-35067338)
chr8 (2-87)||(42786551-42786636)
chr8 (3-87)||(5574349-5574433)
chr8 (2-87)||(41639691-41639776)
chr8 (3-87)||(39453210-39453294)
chr8 (1-84)||(33100367-33100450)
chr8 (10-87)||(3413086-3413163)
chr8 (1-92)||(7814476-7814572)
chr8 (1-92)||(7795188-7795284)
chr8 (18-95)||(36969560-36969637)
chr8 (25-93)||(12339046-12339113)
chr8 (1-64)||(7777098-7777159)
chr8 (2-54)||(42619907-42619959)
chr8 (2-87)||(45405624-45405709)
chr8 (10-53)||(6972255-6972298)
chr8 (1-92)||(8671444-8671535)
chr8 (10-93)||(38675704-38675787)
[»] chr2 (24 HSPs)
chr2 (1-94)||(45420227-45420320)
chr2 (1-95)||(3771463-3771557)
chr2 (1-94)||(12784283-12784376)
chr2 (1-90)||(4657393-4657482)
chr2 (1-94)||(17999564-17999657)
chr2 (1-93)||(1040605-1040697)
chr2 (10-87)||(21738511-21738588)
chr2 (2-87)||(7084608-7084693)
chr2 (1-94)||(29449303-29449395)
chr2 (21-87)||(26290744-26290810)
chr2 (1-87)||(42532632-42532718)
chr2 (2-87)||(19843577-19843662)
chr2 (1-94)||(40700287-40700380)
chr2 (4-87)||(43658605-43658688)
chr2 (12-95)||(4319809-4319892)
chr2 (2-87)||(12070940-12071025)
chr2 (18-94)||(40357973-40358049)
chr2 (10-53)||(6336351-6336394)
chr2 (3-54)||(18737800-18737851)
chr2 (2-53)||(33616560-33616611)
chr2 (20-65)||(18982951-18982996)
chr2 (1-88)||(5032014-5032102)
chr2 (2-94)||(14328474-14328566)
chr2 (18-86)||(39309518-39309586)
[»] chr4 (20 HSPs)
chr4 (1-94)||(1795868-1795961)
chr4 (1-94)||(49585086-49585179)
chr4 (1-93)||(11546788-11546880)
chr4 (1-93)||(50980682-50980774)
chr4 (1-85)||(48649610-48649694)
chr4 (1-93)||(55609052-55609144)
chr4 (1-92)||(193624-193715)
chr4 (3-93)||(44257618-44257707)
chr4 (10-93)||(19165319-19165403)
chr4 (2-87)||(16019569-16019654)
chr4 (1-94)||(36123347-36123439)
chr4 (10-87)||(47015106-47015183)
chr4 (2-78)||(46665097-46665173)
chr4 (10-89)||(32224032-32224110)
chr4 (13-93)||(34363655-34363735)
chr4 (3-87)||(34757802-34757886)
chr4 (3-87)||(34759076-34759160)
chr4 (17-87)||(15522462-15522532)
chr4 (26-94)||(624198-624266)
chr4 (2-95)||(50831641-50831734)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-93)||(12589-12681)
[»] chr5 (15 HSPs)
chr5 (1-93)||(22098347-22098439)
chr5 (10-96)||(16690600-16690686)
chr5 (173-224)||(27947316-27947367)
chr5 (10-87)||(38493726-38493803)
chr5 (1-92)||(32639135-32639226)
chr5 (1-93)||(38293245-38293338)
chr5 (10-87)||(9168061-9168137)
chr5 (3-87)||(884535-884619)
chr5 (1-90)||(40364660-40364749)
chr5 (17-85)||(14321850-14321918)
chr5 (27-78)||(26686996-26687047)
chr5 (27-78)||(26956727-26956778)
chr5 (27-85)||(34940751-34940809)
chr5 (13-93)||(40829518-40829598)
chr5 (13-94)||(4088547-4088628)
[»] chr7 (15 HSPs)
chr7 (2-87)||(35822868-35822953)
chr7 (3-84)||(44496699-44496780)
chr7 (1-85)||(41590415-41590499)
chr7 (1-93)||(31398216-31398308)
chr7 (1-94)||(48145616-48145697)
chr7 (18-95)||(26018149-26018226)
chr7 (1-89)||(41589977-41590062)
chr7 (1-53)||(42598135-42598187)
chr7 (2-53)||(40854582-40854633)
chr7 (27-87)||(41430045-41430105)
chr7 (27-87)||(42584920-42584980)
chr7 (2-87)||(36352477-36352563)
chr7 (26-84)||(44651126-44651184)
chr7 (16-95)||(46259979-46260056)
chr7 (3-55)||(47012495-47012547)
[»] scaffold0687 (1 HSPs)
scaffold0687 (1-92)||(7151-7247)
[»] scaffold0662 (1 HSPs)
scaffold0662 (10-87)||(1245-1322)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-51)||(94811-94861)


Alignment Details
Target: chr6 (Bit Score: 101; Significance: 3e-50; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 97 - 224
Target Start/End: Complemental strand, 34873156 - 34873028
Alignment:
Q  97 aacaatggctaatatata-tctatcatctaccttagtttactacggagacatcagttctatttcataattaaaaaccatacatgccgtttgtttttgaaa 195  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  34873156 aacaatggctaatacataatctatcaactaccttagtttactacggaggcatcagttctatttcataatcaaaatccatacatgccgtttgtttttgaaa 34873057  T
Q  196 ttctcgtctttgcattatcatttcatctc 224  Q
    |||||||||||||||||||||||||||||    
T  34873056 ttctcgtctttgcattatcatttcatctc 34873028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 1376458 - 1376551
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1376458 acttttatatttgtgtcaatacatatttttctttgtaaaaatgtggttgtccatttagttgtcaagcaaattgatgttcaaataacactactct 1376551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 1384206 - 1384299
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1384206 acttttatatttgtgtcaatacatatttttctttgtaaaaatgtggttgtccatttagttgtcaagcaaattgatgttcaaataacactactct 1384299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 13423069 - 13423151
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactact 92  Q
    ||||||||||||||||||||||||||||||||| | |||||| | || ||||||||  |||| ||||||||||||||||||||    
T  13423069 tttgtgccaatacatatttttctttgtaaaaatatagttgtccacttggttgtcaaataaatggatgttcaaataacactact 13423151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 27612966 - 27613054
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacact 89  Q
    |||||||| || ||| ||||||||||||||||||||||| || |||||||| ||||  ||||||| ||||| |||||||||||||||||    
T  27612966 actttgattttcgtgtcaatacatatttttctttgtaaacatatggttgtccatttgattgtcaaacaaatagatgttcaaataacact 27613054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 33651121 - 33651200
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacact 89  Q
    ||||| |||||||||| |||||||||||||||| |||||||| ||||  ||||||| ||||| |||||||||||||||||    
T  33651121 tttgtaccaatacataattttctttgtaaaaatatggttgtctatttgattgtcaaacaaatggatgttcaaataacact 33651200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 28630190 - 28630283
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    |||||||| |||||||||| ||||  |||| ||||||||||| |||||||| ||||||||||||  ||||| |||||||| |||||| ||||||    
T  28630190 actttgatttttgtgccaacacatgcttttatttgtaaaaatatggttgtctatttagttgtcacacaaatagatgttcatataacattactct 28630283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 31869159 - 31869252
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    |||||||| || ||||||||||||||||| |||||||||||   |  |||| ||||  ||||||||||||| ||||||||||||||||||||||    
T  31869159 actttgattttcgtgccaatacatattttcctttgtaaaaacaagagtgtctatttgattgtcaagcaaatagatgttcaaataacactactct 31869252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 9083015 - 9082950
Alignment:
Q  29 ttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    |||| |||||||||||||||||| |||| ||| |||   |||||||||||||||||||||||||||    
T  9083015 ttctgtgtaaaaatgtggttgtccatttggttatcacataaattgatgttcaaataacactactct 9082950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 16337142 - 16337202
Alignment:
Q  33 ttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    |||||||||| |||||||| |||| ||||||||  |||| |||||||||||||||||||||    
T  16337142 ttgtaaaaatatggttgtctatttggttgtcaattaaatggatgttcaaataacactactc 16337202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 9919200 - 9919244
Alignment:
Q  112 atatctatcatctaccttagtttactacggagacatcagttctat 156  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||||    
T  9919200 atatctatcaactaccttagtttactacggaggcatcacttctat 9919244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 31760236 - 31760176
Alignment:
Q  32 tttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactact 92  Q
    |||||| ||| ||||||||  |||| |||||||| ||||| ||||||||||||||||||||    
T  31760236 tttgtataaacgtggttgtttatttggttgtcaaacaaatggatgttcaaataacactact 31760176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 3e-44; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12999802 - 12999708
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12999802 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtccatttagttgtcaagcaaattgatgttcaaataacactactcta 12999708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 30973644 - 30973737
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30973644 actttgatatttgtgtcaatacatacttttctttgtaaaaatgtgattgtccatttagttgtcaagcaaattgatgttcaaataacactactct 30973737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 49931645 - 49931736
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactact 92  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  49931645 actttgatatttgtgccaatacatacttttctttggaaaaatgtggttgtccatttagttatcaagcaaattgatgttcaaataacactact 49931736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33076211 - 33076305
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| || |||||||||||||||||||||||||||| |||||    
T  33076211 actttgatatttgtgccaatacataattttctttgtaaaattgtggttgtccatttaattatcaagcaaattgatgttcaaataacactgctcta 33076305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 30536081 - 30536172
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||    
T  30536081 actttgatatttgtgccaa--catacttttctttgtaaaaatgtggttgtccgtttagttgttaagcaaattgatgttcaaataacactactct 30536172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 49446777 - 49446687
Alignment:
Q  1 actttgatatttgtgccaatacata----tttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||||||||||||||||||||||    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  49446777 actttgatatttgtgccaatacatacatatttttctttgtaaaaatgtgattgtccatttagttgtcaagcaaattgatgttcaaataaca 49446687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 49020376 - 49020301
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataa 85  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  49020376 tttgtgccaatatatatttttctttgtaaaaatatggttgtcaatttggttgtcaaccaaattgatgttcaaataa 49020301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 34818023 - 34817938
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    ||||||| |||||||||| |||||||||||||||||||||| ||||||||||| |  |||||||  ||||||||||||||||||||    
T  34818023 ctttgatttttgtgccaacacatatttttctttgtaaaaatatggttgtcaatatgattgtcaactaaattgatgttcaaataaca 34817938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 29359844 - 29359921
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||| ||| ||||| |||||||| ||||||| ||||||||||| | |||||||| |||||||||||||||||||||    
T  29359844 tttgtgtcaacacatacttttctttataaaaatatggttgtcaatgtggttgtcaatcaaattgatgttcaaataaca 29359921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 26501255 - 26501173
Alignment:
Q  12 tgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    |||||||||||| |  ||||||| ||||||||||||||||||||| ||||| | | | ||||||||||||||||||| |||||    
T  26501255 tgtgccaatacacacatttctttctaaaaatgtggttgtcaatttggttgtaacgtacattgatgttcaaataacaccactct 26501173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 11947887 - 11947981
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    ||||| || ||||||| || ||||  |||| ||||||||||| |||||||| ||||||||||||  ||||| |||||||| |||||| |||||||    
T  11947887 actttaatttttgtgcaaacacatgcttttatttgtaaaaatatggttgtctatttagttgtcacacaaatagatgttcatataacattactcta 11947981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 29877405 - 29877475
Alignment:
Q  17 caatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    ||||||||| |||||||||||||||| |||||||| || |  |||||||  ||||||||||||||||||||    
T  29877405 caatacataattttctttgtaaaaatatggttgtccatatgattgtcaataaaattgatgttcaaataaca 29877475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 30745087 - 30745164
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||| ||||||||| |||||||||||| | | |||||||| || | |||||||| |||||| ||||||||||||||    
T  30745087 tttgtgtcaatacataattttctttgtaagagtatggttgtctatatggttgtcaatcaaattaatgttcaaataaca 30745164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 30766538 - 30766615
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||| ||||||||| |||||||||||| | | |||||||| || | |||||||| |||||| ||||||||||||||    
T  30766538 tttgtgtcaatacataattttctttgtaagagtatggttgtctatatggttgtcaatcaaattaatgttcaaataaca 30766615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 4629703 - 4629641
Alignment:
Q  26 tttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacac 88  Q
    |||||||||||||| ||||||||||||| | ||||||||| | ||| | ||||||||||||||    
T  4629703 tttttctttgtaaagatgtggttgtcaaataagttgtcaatctaatagttgttcaaataacac 4629641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 30519587 - 30519509
Alignment:
Q  18 aatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactctag 96  Q
    |||||||  |||||||||||||||  |||||||| || | |||||||| || |||||||||||||||||| | ||||||    
T  30519587 aatacatgattttctttgtaaaaagatggttgtccatgtggttgtcaatcacattgatgttcaaataacattgctctag 30519509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 32831131 - 32831061
Alignment:
Q  17 caatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||| |||| |||||||||||||||  |||||||| |||| ||||||| |||||| |||||||||| ||||    
T  32831131 caatccatacttttctttgtaaaaacatggttgtctatttggttgtcaggcaaatagatgttcaaacaaca 32831061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 36750455 - 36750412
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaa 53  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||    
T  36750455 tttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 36750412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 49570090 - 49570141
Alignment:
Q  3 tttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaat 54  Q
    |||||| |||||||||| ||||| |||||||| ||||||| |||||||||||    
T  49570090 tttgatttttgtgccaacacatacttttctttataaaaatatggttgtcaat 49570141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 11597754 - 11597824
Alignment:
Q  27 ttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactctaga 97  Q
    |||||||||||||  | ||||||||   | ||||||||||||||| ||||||||||||||||  |||||||    
T  11597754 ttttctttgtaaatctatggttgtcccataagttgtcaagcaaatggatgttcaaataacacacctctaga 11597824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 44517939 - 44517903
Alignment:
Q  3 tttgatatttgtgccaatacatatttttctttgtaaa 39  Q
    |||||| |||||| |||||||||||||||||||||||    
T  44517939 tttgatttttgtgtcaatacatatttttctttgtaaa 44517903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 3e-41; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 49761166 - 49761073
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  49761166 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtccatttagttgtcaagcaaattgatgttgaaataacactactct 49761073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 37894221 - 37894128
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37894221 actttgatatttgtgtcaatacatacttttcttggtaaaaatgtggttgtccatttagttgtcaagcaaattgatgttcaaataacactactct 37894128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 48944690 - 48944599
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactact 92  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||  ||||||||||||||||||||||||||||||||||||||||    
T  48944690 actttgatatttgtgccaatacatatttttctttgtaaaaatatgattgttcatttagttgtcaagcaaattgatgttcaaataacactact 48944599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 52100352 - 52100445
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    |||||||||||| ||| ||||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  52100352 actttgatatttatgctaatacatatttttctttgtaaaaatatgattgtccatttaattgtcaagcaaattgatgttcaaataacactactct 52100445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 16479724 - 16479816
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    |||||||| || |||||||||||||||||||||||||||||   ||||||| |||| |||||||||||||| |||||||||||||||||||||    
T  16479724 actttgattttcgtgccaatacatatttttctttgtaaaaacaaggttgtctatttggttgtcaagcaaatagatgttcaaataacactactc 16479816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 23868956 - 23868869
Alignment:
Q  3 tttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacacta 90  Q
    |||||| ||||||||||||||| |||||| |||||||||| || ||||| |||| |||||||||||||| ||||||||||||||||||    
T  23868956 tttgatttttgtgccaatacatttttttccttgtaaaaatatgattgtctatttggttgtcaagcaaatagatgttcaaataacacta 23868869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33796358 - 33796452
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    |||||||| |||||||||| ||||| |||||||| ||||||| ||||||||||| |  ||||||| ||||||||| ||||||||||| |||||||    
T  33796358 actttgatttttgtgccaacacatacttttctttataaaaatatggttgtcaatgtgattgtcaaccaaattgattttcaaataacattactcta 33796452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 1436917 - 1436994
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||| | ||||| || |||||||||||||||||||||    
T  1436917 tttgtgccaacacatacttttctttgtaaaaatatggttgtcaatgtggttgtaaaccaaattgatgttcaaataaca 1436994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 51698959 - 51699036
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||||||| ||||| |||||||||||| ||| ||||||||||| | |||||||| |||||||||||||||||||||    
T  51698959 tttgtgccaacacatacttttctttgtaagaatatggttgtcaatgtggttgtcaaccaaattgatgttcaaataaca 51699036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 52485576 - 52485657
Alignment:
Q  13 gtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    ||||||||||||| |||||||||||||||| |||||||| |||  |||||||| ||||| |||||||||||||||| |||||    
T  52485576 gtgccaatacatacttttctttgtaaaaatatggttgtccattaggttgtcaaacaaatagatgttcaaataacacaactct 52485657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 54099335 - 54099242
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    ||||||| ||| |||||| | ||| |||||||||||||||| || |||||||| || ||||||| ||||||||||||||||||||| |||||||    
T  54099335 ctttgatttttatgccaacatatacttttctttgtaaaaatatgattgtcaatgtaattgtcaaccaaattgatgttcaaataacattactcta 54099242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 36756029 - 36755944
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    ||||||| |||||||||| | ||| |||||||||||||||| ||||||||||| |  ||||||| ||||||||| |||||||||||    
T  36756029 ctttgatttttgtgccaacatatacttttctttgtaaaaatatggttgtcaatgtgattgtcaatcaaattgatattcaaataaca 36755944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 45186515 - 45186438
Alignment:
Q  17 caatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    ||||||||| ||||| |||||||| | |||||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  45186515 caatacatacttttcgttgtaaaagtatggttgtccatttggttgtcaaacaaattgatgttcgaataacactactct 45186438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 45657749 - 45657690
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagtt 60  Q
    ||||||||||||||||||||||||| |||||||| || ||||||| ||||||||||||||    
T  45657749 actttgatatttgtgccaatacatacttttctttatataaatgtgattgtcaatttagtt 45657690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 26772462 - 26772555
Alignment:
Q  3 tttgatatttgtgccaatacatatttttcttt-gtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    |||||| || ||| ||||||||| |||||||| ||||||||  ||||||| |||| | |||||| ||||| |||||||||||||||||||||||    
T  26772462 tttgattttcgtgtcaatacatagttttcttttgtaaaaataaggttgtctatttggatgtcaaacaaatagatgttcaaataacactactcta 26772555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 34592156 - 34592250
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    |||||||| || ||| ||||||||| |||||||||||||||    |||||| ||||   |||||| ||||| |||||||||||||||||||||||    
T  34592156 actttgattttcgtgtcaatacatacttttctttgtaaaaacaatgttgtctatttgactgtcaaacaaatagatgttcaaataacactactcta 34592250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 35377060 - 35376968
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    ||||||| |||||||||||||||  |||||||||||||| | |||||||||    ||||||||   |||| |||||||||||||||| |||||    
T  35377060 ctttgatttttgtgccaatacatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactct 35376968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 29780991 - 29781082
Alignment:
Q  3 tttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    |||||| || ||||||||||| | |||||||| ||||||| || ||||| || |  ||||||| ||||||||||| ||||||||| ||||||    
T  29780991 tttgattttcgtgccaatacaaacttttctttataaaaatatgattgtccatatgattgtcaatcaaattgatgtccaaataacattactct 29781082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 49021804 - 49021855
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaa 53  Q
    ||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  49021804 ctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 49021855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 52714826 - 52714877
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaa 53  Q
    ||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  52714826 ctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 52714877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26550329 - 26550406
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgtt 78  Q
    ||||| || ||||||| | |||| | ||||||||||||||||||| ||||| |||| |||||||  ||||||||||||    
T  26550329 actttaatttttgtgctagtacacacttttctttgtaaaaatgtgattgtccatttggttgtcacacaaattgatgtt 26550406  T

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Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 36907144 - 36907216
Alignment:
Q  13 gtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataa 85  Q
    |||| ||||||||| ||||||||||||||| |||||||| |||  ||||  || ||||| |||||||||||||    
T  36907144 gtgcaaatacatatatttctttgtaaaaatatggttgtccattaggttgctaaacaaatagatgttcaaataa 36907216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 48287763 - 48287804
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaat 42  Q
    |||||||| || |||| |||||||||||||||||||||||||    
T  48287763 actttgattttcgtgctaatacatatttttctttgtaaaaat 48287804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 5527444 - 5527484
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgt 50  Q
    |||||| |||||||||| ||||||||||||||| |||||||    
T  5527444 tttgtgtcaatacatatatttctttgtaaaaatatggttgt 5527484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 47742383 - 47742459
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataac 86  Q
    ||||| |||| ||||| || |||| |||||||| | ||||| ||| | |||||||| ||||||| ||||||||||||    
T  47742383 tttgttccaacacatacttctcttcgtaaaaatatagttgttaatgtggttgtcaaccaaattgctgttcaaataac 47742459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 91
Target Start/End: Complemental strand, 51771386 - 51771354
Alignment:
Q  59 ttgtcaagcaaattgatgttcaaataacactac 91  Q
    ||||||||||||| |||||||||||||||||||    
T  51771386 ttgtcaagcaaatagatgttcaaataacactac 51771354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 52089888 - 52089820
Alignment:
Q  27 ttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    ||||||||||||||||    ||||| |||||||||||||   ||| |||||| ||||||||||||||||    
T  52089888 ttttctttgtaaaaataaaattgtctatttagttgtcaaattaatagatgtttaaataacactactcta 52089820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 52963286 - 52963254
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaat 42  Q
    |||||| ||||||||||||||||||||||||||    
T  52963286 tttgtgtcaatacatatttttctttgtaaaaat 52963254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 7e-39; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33539497 - 33539590
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33539497 actttgatatttgtgccaatacatacttttctttgaaaaaatgtggttgtccatttagttgtcaagcaaattgatgttcaaataacactactct 33539590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 43715966 - 43716062
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactctaga 97  Q
    |||||||||||||| |||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43715966 actttgatatttgtaccaatacatacttttcttggtaaaaatgtggttgtccatttagttgtcaagcaaattgatgttcaaataacactactctaga 43716062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 25830225 - 25830133
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  25830225 actttgatatttgtgccaatacatacttttctttgtaaaaatgtggttgtccatttagttgttaaacaaattgatgttcaaataacactactc 25830133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 67140 - 67046
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  67140 actttgatatttgtgccaatacatgattttctttgtaaaaatgtggttgtctatttggttgtcaagcaaattaatgttcaaataacactactcta 67046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 35792130 - 35792224
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    ||||||||||||||||||||||||| |||| ||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||    
T  35792130 actttgatatttgtgccaatacatactttttttgataaaaatgtggttgtccatttagttgtcaagcaaattggtgttcaaataacactcctcta 35792224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 12656014 - 12656108
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    ||||| || ||||||||||| |||| |||||||||||||||  |||||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  12656014 actttcatttttgtgccaatgcatacttttctttgtaaaaacatggttgtctatttggttgtcaagcaaatagatgttcaaataacactactcta 12656108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 6440174 - 6440259
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    ||||||| |||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||| ||| |||||||||||||||||    
T  6440174 ctttgatttttgtgtcaatacatacttttctttgtaaaaatatggttgtcaatttggttgtcaaccaagttgatgttcaaataaca 6440259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 3270859 - 3270766
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    ||||||| ||||||||||| |||| |||| ||| ||||| | |||||||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  3270859 ctttgatttttgtgccaatccatacttttgtttataaaattatggttgtcaatttagttgtcaaccaagttgatgttcaaataacattactcta 3270766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 35067261 - 35067338
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||| | |||||||| |||||||||||||||||||||    
T  35067261 tttgtgccaacacatacttttctttgtaaaaatatggttgtcaatgtggttgtcaaccaaattgatgttcaaataaca 35067338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 42786636 - 42786551
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    ||||||| |||||||||||||||||||||||||||||||   || |||||||||| |||||||| ||| |||||||||||||||||    
T  42786636 ctttgatttttgtgccaatacatatttttctttgtaaaatcatgattgtcaatttggttgtcaaccaagttgatgttcaaataaca 42786551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 5574349 - 5574433
Alignment:
Q  3 tttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||| ||||||  |||||||| |||||||||||||||| ||| ||||||| |||||||||| |||||||||||||||||||||    
T  5574349 tttgatttttgtgttaatacatacttttctttgtaaaaatatgggtgtcaatatagttgtcaaccaaattgatgttcaaataaca 5574433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 41639776 - 41639691
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    ||||||| |||||| ||| ||||| |||||||||||||||| ||||||||||  | |||||||| |||||||||||||||||||||    
T  41639776 ctttgatttttgtgtcaacacatacttttctttgtaaaaatatggttgtcaacgtggttgtcaaccaaattgatgttcaaataaca 41639691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 39453294 - 39453210
Alignment:
Q  3 tttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||| ||| || ||||||||| |||||||||||||||| || |||||||| | |||||||| |||||||||||||||||||||    
T  39453294 tttgatttttctgtcaatacataattttctttgtaaaaatatgattgtcaatgtggttgtcaatcaaattgatgttcaaataaca 39453210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 33100450 - 33100367
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaata 84  Q
    |||||||| |||||| ||||||||| ||||||||||||||||  ||||||| |||| |||||||| ||||| ||||||||||||    
T  33100450 actttgatttttgtgtcaatacatacttttctttgtaaaaataaggttgtctatttggttgtcaaacaaatggatgttcaaata 33100367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 3413163 - 3413086
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||||||||||||  |||||||||||||||| ||  ||||||| | |||||||| |||||||||||||||||||||    
T  3413163 tttgtgccaatacatgattttctttgtaaaaatatgactgtcaatgttgttgtcaaccaaattgatgttcaaataaca 3413086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 7814572 - 7814476
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagtt-------gtcaagcaaattgatgttcaaataacactact 92  Q
    |||||||||||| || |||| |||| |||||||||||||  |||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  7814572 actttgatatttatgtcaatgcatacttttctttgtaaa--tgtggttgtcaatttagttgtcatttgtcaagcaaattgatgttcaaataacactact 7814476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 7795284 - 7795188
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttag-------ttgtcaagcaaattgatgttcaaataacactact 92  Q
    ||||||||||||||| |||| |||| ||||||||||  |||||| |||||||||||||       |||||||||||||||||||||| |||||||||||    
T  7795284 actttgatatttgtgtcaatgcatacttttctttgt--aaatgtagttgtcaatttagttgtcatttgtcaagcaaattgatgttcatataacactact 7795188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 36969637 - 36969560
Alignment:
Q  18 aatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    ||||||||| ||||||||||||||| ||||||||   | ||||||||| ||||| |||||||||||||||| ||||||    
T  36969637 aatacatatatttctttgtaaaaatatggttgtcgcataagttgtcaaacaaatggatgttcaaataacacaactcta 36969560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 12339113 - 12339046
Alignment:
Q  25 atttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    |||||||||||||||||| |||||||  ||||||||||||  |||||||||| ||||||||||||||||    
T  12339113 atttttctttgtaaaaatatggttgttcatttagttgtcacacaaattgatg-tcaaataacactactc 12339046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7777159 - 7777098
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtca 64  Q
    |||||||||||||||  ||| |||| |||||||||||||  |||||||||||||||||||||||    
T  7777159 actttgatatttgtgttaatgcatacttttctttgtaaa--tgtggttgtcaatttagttgtca 7777098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 42619959 - 42619907
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaat 54  Q
    ||||||| |||||||||| ||||| |||||||||||||||| |||||||||||    
T  42619959 ctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgtcaat 42619907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 45405624 - 45405709
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    ||||||| || ||| ||||| ||  |||||||||||||||| | |||||| || | |||||||| || ||||||||||||||||||    
T  45405624 ctttgattttcgtgtcaatatatgattttctttgtaaaaatatagttgtccatgtggttgtcaatcacattgatgttcaaataaca 45405709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 6972255 - 6972298
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaa 53  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||    
T  6972255 tttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 6972298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8671535 - 8671444
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactact 92  Q
    |||||||| |||||  ||||| || ||||| ||||||||||| ||| |||| ||||  |||| || ||||| ||||||||||||||| ||||    
T  8671535 actttgatttttgtatcaatatatttttttttttgtaaaaatatggctgtccatttgattgttaaacaaatggatgttcaaataacattact 8671444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 38675704 - 38675787
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    |||||||||||||||| |||||||| ||||  | |||||||| ||||  || ||||  |||| |||||||||||||||| ||||    
T  38675704 tttgtgccaatacatacttttctttttaaagttatggttgtctatttgattatcaaataaatagatgttcaaataacacaactc 38675787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 7e-39; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 45420227 - 45420320
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||    
T  45420227 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtctatttagttgtcaaataaattgatgttcaaataacactactct 45420320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3771463 - 3771557
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  3771463 actttgatatttgtgtcaatacgtacttttctttgtaaaaatgtggttgtccatttagttgtcaagcaaattgacgttcaaataacactactcta 3771557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 12784376 - 12784283
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    |||||||| ||| ||||||| ||||||||||||||||||||  |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  12784376 actttgatttttatgccaatgcatatttttctttgtaaaaacatggttgtctatttagttgtcaagcaaatagatgttcaaataacactactct 12784283  T

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Target: chr2; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 4657393 - 4657482
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacacta 90  Q
    |||||||||||| |||||||||| | ||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| ||||    
T  4657393 actttgatatttatgccaatacacaattttctttgtaaaaatgtgattgtccatttggttgtcaagcaaattgatgttcaaataatacta 4657482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17999657 - 17999564
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    |||||||| || |||||||||||||||||||||||||||||   ||||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  17999657 actttgattttcgtgccaatacatatttttctttgtaaaaacaaggttgtctatttagttgtcaaacaaatagatgttcaaataacactactct 17999564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 1040605 - 1040697
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||| ||||| ||||  ||||||||||||| |||||||||||||||||||||    
T  1040605 actttgatttttgtgccaatacatacttttctttgtaaaaacgtgattgtctatttgattgtcaagcaaatagatgttcaaataacactactc 1040697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 21738588 - 21738511
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||||||| |||||||||||||||||||||| || |||||||| | |||||||| |||||||||||||||||||||    
T  21738588 tttgtgccaacacatatttttctttgtaaaaatatgattgtcaatgtcgttgtcaaccaaattgatgttcaaataaca 21738511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 7084693 - 7084608
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    ||||||| ||||| |||| ||||| |||||||||||||||| || |||||||| | |||||||| |||||||||||||||||||||    
T  7084693 ctttgatttttgtaccaacacatacttttctttgtaaaaatatgattgtcaatgtggttgtcaaccaaattgatgttcaaataaca 7084608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 29449303 - 29449395
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    |||||||| ||||||| ||| |||| |||||||||||||||  || ||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  29449303 actttgatttttgtgcaaatgcatacttttctttgtaaaaacatg-ttgtctatttggttgtcaagcaaatagatgttcaaataacactactct 29449395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 26290810 - 26290744
Alignment:
Q  21 acatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||||||||||||||||||| || |||||||| ||||| |||| |||||||||||||||||||||    
T  26290810 acatatttttctttgtaaaaatatgattgtcaatgtagttatcaaccaaattgatgttcaaataaca 26290744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 42532718 - 42532632
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||||| || |||||||||||||||||||||| ||||||  | || ||| |||| |||||||||||||| |||||||||||||||    
T  42532718 actttgattttcgtgccaatacatatttttctttataaaaacatagtagtctatttggttgtcaagcaaatagatgttcaaataaca 42532632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 19843577 - 19843662
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    ||||||| |||||||||| ||||| |||||||||||||||| |  |||||||| |  ||||||| |||||||||||||||||||||    
T  19843577 ctttgatttttgtgccaacacatacttttctttgtaaaaatataattgtcaatatgattgtcaaccaaattgatgttcaaataaca 19843662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 40700287 - 40700380
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    |||||||| || ||| ||||| |||||||| ||| ||||||  || ||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  40700287 actttgattttcgtgtcaatatatatttttttttataaaaacatgattgtctatttggttgtcaagcaaatagatgttcaaataacactactct 40700380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 43658688 - 43658605
Alignment:
Q  4 ttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    ||||| ||||||| |||||||| |||||||||||||||  | ||||||||| | |||||||| |||||| ||||||||||||||    
T  43658688 ttgatttttgtgctaatacatacttttctttgtaaaaaaatagttgtcaatatggttgtcaaccaaattaatgttcaaataaca 43658605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 4319809 - 4319892
Alignment:
Q  12 tgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    |||| ||||||||| |||||||| ||||||  ||  |||| ||||| |||||||| |||| |||||||||||||||||||||||    
T  4319809 tgtgtcaatacataattttctttataaaaacatgactgtctatttaattgtcaagtaaatagatgttcaaataacactactcta 4319892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 12070940 - 12071025
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    ||||||| || ||| ||||||||  |||||||||||||||  |||||||| || | |||||||| || ||||||||||||||||||    
T  12070940 ctttgattttcgtgtcaatacatgattttctttgtaaaaagatggttgtccatgtggttgtcaatcacattgatgttcaaataaca 12071025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 40358049 - 40357973
Alignment:
Q  18 aatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    |||||||| |||||||||||||||| || ||||| ||||  |||||||  ||||||||||  |||||| ||||||||    
T  40358049 aatacataattttctttgtaaaaatatgattgtctatttgattgtcaaataaattgatgtgtaaataatactactct 40357973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 6336351 - 6336394
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaa 53  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||    
T  6336351 tttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 6336394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 18737851 - 18737800
Alignment:
Q  3 tttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaat 54  Q
    |||||| |||||||||| ||||| |||||||| ||||||| |||||||||||    
T  18737851 tttgatttttgtgccaacacatacttttctttataaaaatatggttgtcaat 18737800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 33616560 - 33616611
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaa 53  Q
    ||||||| ||||| |||| ||||| |||||||||||||||| ||||||||||    
T  33616560 ctttgatttttgtaccaacacatacttttctttgtaaaaatatggttgtcaa 33616611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 18982951 - 18982996
Alignment:
Q  20 tacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaa 65  Q
    |||||| |||||||||||||||| |||||||| |||| ||||||||    
T  18982951 tacatacttttctttgtaaaaatatggttgtccatttggttgtcaa 18982996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5032014 - 5032102
Alignment:
Q  1 actttgatatttgtgccaatacata-tttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacac 88  Q
    |||||||||||||||| || || || ||||||||||||||  | |||||||||| | ||||||| | ||||  | ||||||||||||||    
T  5032014 actttgatatttgtgctaaaacttactttttctttgtaaatttatggttgtcaaataagttgtctatcaaaaggttgttcaaataacac 5032102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 14328474 - 14328566
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    ||||||| || ||| ||||||||  ||||||| |||||||| |  ||||| || | |||||||| || | |||||||||||||||||| ||||    
T  14328474 ctttgattttcgtgtcaatacatgattttcttagtaaaaatataattgtccatgtggttgtcaatcacaatgatgttcaaataacactgctct 14328566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 39309518 - 39309586
Alignment:
Q  18 aatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataac 86  Q
    |||| ||| |||||||||||||||| || || ||||| |  ||||||| ||||||||| ||||||||||    
T  39309518 aatatatacttttctttgtaaaaatatgattatcaatatgattgtcaaccaaattgattttcaaataac 39309586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 1795961 - 1795868
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  1795961 actttgatatttgtgccaatacatacttttcttggtaaaaatgtggttgtccatttagttgttaagcaaattgatgttcaaataacactactct 1795868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 49585086 - 49585179
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  49585086 actttgatatttgtgccaatacatacttttcttggtaaaaatgtggttgtccatttagttgtcaagcaaattaatgttcaaataacactactct 49585179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 11546880 - 11546788
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||  |||||||| ||||||||||||||||||||||||||    
T  11546880 actttgatatttgtgccaatacataattttttttgtaaaaatgtggttgtccatttgattgtcaagtaaattgatgttcaaataacactactc 11546788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 50980682 - 50980774
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||    
T  50980682 actttgatatttgtgccaatacatacttttctttgtaaaaatgtgattgtccatttagttgtccagcaaattgatgtttaaataacattactc 50980774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 48649610 - 48649694
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataa 85  Q
    ||||||||||||||  ||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  48649610 actttgatatttgtttcaatacatacttttctttgttaaaatgtggttgtctatttagttgtcaaacaaattgatgttcaaataa 48649694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 55609144 - 55609052
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    |||||||| || |||||||||||||||||||||||||||||   ||||||| |||| |||||||||||||| |||||||||||||||||||||    
T  55609144 actttgattttcgtgccaatacatatttttctttgtaaaaacaaggttgtctatttggttgtcaagcaaatagatgttcaaataacactactc 55609052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 193624 - 193715
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactact 92  Q
    |||||||| || ||| |||||||||||||||||||||||||  || ||||| |||| |||||||||||||| ||||||||||||||||||||    
T  193624 actttgattttcgtgtcaatacatatttttctttgtaaaaacatgattgtctatttggttgtcaagcaaatagatgttcaaataacactact 193715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 44257707 - 44257618
Alignment:
Q  3 tttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    |||||||||||||  |||||||| |||||||| |||||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||    
T  44257707 tttgatatttgtgttaatacatacttttctttataaaaatgtgattgtccatttagttgtcaaacaaattgatgttcaaat-acactactc 44257618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 19165403 - 19165319
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatt-tagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||  | ||||||| |||||||||||||||||||||| ||||    
T  19165403 tttgtgccaatacatatttttctttgtaaaaatatggttgtccattagatttgtcaaacaaattgatgttcaaataacacaactc 19165319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 16019569 - 16019654
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    ||||||| |||||| |||  ||||||||||||| ||||||| ||||||||||| |  ||||||| |||||||||||||||||||||    
T  16019569 ctttgatttttgtgtcaacgcatatttttctttataaaaatatggttgtcaatatgcttgtcaatcaaattgatgttcaaataaca 16019654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 36123439 - 36123347
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    |||||||| ||||||| ||| |||| |||||||||||||||  || ||||| ||||  ||||||||||||| ||||||||||||||||||||||    
T  36123439 actttgatttttgtgcaaatgcatacttttctttgtaaaaacatg-ttgtctatttgattgtcaagcaaatagatgttcaaataacactactct 36123347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 47015106 - 47015183
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||||||||| ||| |||||||||||||||| || |||||||| | |||||||| |||| ||||||||||||||||    
T  47015106 tttgtgccaatagatacttttctttgtaaaaatatgattgtcaatgtggttgtcaaccaaactgatgttcaaataaca 47015183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 46665173 - 46665097
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgtt 78  Q
    ||||||| ||| |||||||||||| ||||||||||||| || ||||||||||||| |||||||| ||| ||||||||    
T  46665173 ctttgatttttatgccaatacatacttttctttgtaaatatatggttgtcaatttggttgtcaatcaagttgatgtt 46665097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 32224032 - 32224110
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacact 89  Q
    ||||||||||| |||||||| |||||||||||  ||||| || ||||||||||||||||||| ||||||| |||||||||    
T  32224032 tttgtgccaatgcatatttt-ctttgtaaaaacatggttatctatttagttgtcaagcaaatagatgttcgaataacact 32224110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 34363655 - 34363735
Alignment:
Q  13 gtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    ||||||||||||| |||||||||||| ||||||||||||  || || |||||| |||||  ||||||||||||||| ||||    
T  34363655 gtgccaatacatacttttctttgtaataatgtggttgtctgttaagctgtcaaacaaataaatgttcaaataacacaactc 34363735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 34757886 - 34757802
Alignment:
Q  3 tttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||| |||||||||| |||| ||||||||||||||||| || |||||| | |  ||||||| ||||||||| || ||||||||    
T  34757886 tttgatttttgtgccaacacatgtttttctttgtaaaaatatgattgtcagtgtgattgtcaatcaaattgatatttaaataaca 34757802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 34759160 - 34759076
Alignment:
Q  3 tttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||| |||||||||| |||| ||||||||||||||||| || |||||| | |  ||||||| ||||||||| || ||||||||    
T  34759160 tttgatttttgtgccaacacatgtttttctttgtaaaaatatgattgtcagtgtgattgtcaatcaaattgatatttaaataaca 34759076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 15522462 - 15522532
Alignment:
Q  17 caatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    ||||||||  |||||||||||||||  |||||||| || | |||||||| || ||||||||||||||||||    
T  15522462 caatacatgattttctttgtaaaaagatggttgtccatgtggttgtcaatcacattgatgttcaaataaca 15522532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 624266 - 624198
Alignment:
Q  26 tttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaatt-gatgttcaaataacactactct 94  Q
    ||||||||||||||||| |||||||||| | ||||||| | |||||| | ||||||||||||||| ||||    
T  624266 tttttctttgtaaaaatatggttgtcaaataagttgtc-accaaattagttgttcaaataacacttctct 624198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 50831734 - 50831641
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    ||||||| |||||| ||| || | ||||||||||||||| | ||||||||     ||||||||| ||||| | |||||||||||||| ||||||    
T  50831734 ctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactcta 50831641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 12589 - 12681
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  12589 actttgatatttgtgccaatacatacttttcttggtaaaaatgtggttgtccatttagttgtcaagcaaattgatgttcaaataactctactc 12681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 7e-36; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22098347 - 22098439
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||    
T  22098347 actttgatatttgtgccaatacatacttttctttgtaaaaatgtggttgtccatttaattatcaagcaaattgatgttcaaataacactactc 22098439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 16690600 - 16690686
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactctag 96  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||| | |||||||| ||||||||| ||||||||||| | ||||||    
T  16690600 tttgtgccaacacatacttttctttgtaaaaatatggttgtcaatgtggttgtcaaccaaattgatattcaaataacattgctctag 16690686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 27947316 - 27947367
Alignment:
Q  173 atacatgccgtttgtttttgaaattctcgtctttgcattatcatttcatctc 224  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27947316 atacatgccgtttgtttttgaaattctcgtcttcgcattatcatttcatctc 27947367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 38493726 - 38493803
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||||||| ||||| |||||||||| ||||| ||| ||||||| | |||||||| |||||||||||||||||||||    
T  38493726 tttgtgccaacacatacttttctttgttaaaatatgggtgtcaatgtggttgtcaaccaaattgatgttcaaataaca 38493803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 32639135 - 32639226
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactact 92  Q
    |||||||| || |||| |||||||| ||||||||||||||||  | ||||| ||||  |||||| |||||| ||||||||||||||||||||    
T  32639135 actttgattttcgtgctaatacatacttttctttgtaaaaataagattgtctatttgattgtcatgcaaatagatgttcaaataacactact 32639226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 38293338 - 38293245
Alignment:
Q  1 actttgatatttgtgccaatacatat--ttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    |||||||| |||||||||||  ||||  |||||||||||||||  || ||||| |||| |||||||||||||| |||||||||||||||||||||    
T  38293338 actttgat-tttgtgccaatgtatatacttttctttgtaaaaacatgattgtctatttggttgtcaagcaaatagatgttcaaataacactactc 38293245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 9168137 - 9168061
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||||||| ||||| |||||||||||||| | || |||||||| | |||||||| |||||||||||||||||||||    
T  9168137 tttgtgccaacacatacttttctttgtaaaa-tatgattgtcaatatggttgtcaaccaaattgatgttcaaataaca 9168061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 884535 - 884619
Alignment:
Q  3 tttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||| |||||||||| ||||| ||||| |||||||||| ||||||| ||| |  |||||||  ||||||||||||||||||||    
T  884535 tttgatttttgtgccaacacatacttttcattgtaaaaatatggttgttaatatgattgtcaactaaattgatgttcaaataaca 884619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 40364660 - 40364749
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacacta 90  Q
    |||||||| |||||||| ||  ||| |||||||| ||||||  ||||| || ||||  ||||||||||||| ||||||||||||||||||    
T  40364660 actttgatttttgtgccgatgtatacttttctttctaaaaacatggttatctatttgattgtcaagcaaatagatgttcaaataacacta 40364749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 14321918 - 14321850
Alignment:
Q  17 caatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataa 85  Q
    ||||||||| |||||||||||||| | |||||||| || | ||||||||  ||||||||||||||||||    
T  14321918 caatacataattttctttgtaaaagtatggttgtccatatggttgtcaattaaattgatgttcaaataa 14321850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 26686996 - 26687047
Alignment:
Q  27 ttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgtt 78  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||| |||||    
T  26686996 ttttctttgtaaaaatatggttgtcaatgtagttgtcaatcaaattaatgtt 26687047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 26956727 - 26956778
Alignment:
Q  27 ttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgtt 78  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||| |||||    
T  26956727 ttttctttgtaaaaatatggttgtcaatgtagttgtcaatcaaattaatgtt 26956778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 34940751 - 34940809
Alignment:
Q  27 ttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataa 85  Q
    |||||||| ||||||| || |||||||| | |||||||| |||||||||||||||||||    
T  34940751 ttttctttataaaaatatgattgtcaatgtggttgtcaaccaaattgatgttcaaataa 34940809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 40829518 - 40829598
Alignment:
Q  13 gtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    |||| |||||||| |||||||| | ||||| | ||||||||||| |||||||  |||| | |||||||||||||| |||||    
T  40829518 gtgctaatacatacttttctttatgaaaatttagttgtcaatttggttgtcacacaaagtaatgttcaaataacattactc 40829598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 4088547 - 4088628
Alignment:
Q  13 gtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    |||| ||||||||  ||||||||||||||| || ||||||  |  ||||||||  |||| |||||||||||||||| |||||    
T  4088547 gtgctaatacatacatttctttgtaaaaatatgattgtcacataggttgtcaaaaaaatagatgttcaaataacacaactct 4088628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 6e-27; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 35822953 - 35822868
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||  | |||||||| |||||||||||||||||||||    
T  35822953 ctttgatttttgtgccaatacatatttttctttgtaaaaatatggttgtcaacgtggttgtcaaccaaattgatgttcaaataaca 35822868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 44496780 - 44496699
Alignment:
Q  3 tttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaata 84  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||| ||||| ||||||| ||||||||||||||||||    
T  44496780 tttgatatttgtgccaatacataattttctttgtaaaaatatggttgtccatttaattgtcaaacaaattgatgttcaaata 44496699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 41590499 - 41590415
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataa 85  Q
    |||||||| |||||||||||||||||||||| |||||||||  |||||||| |||| |||||||||||||| |||||||||||||    
T  41590499 actttgatttttgtgccaatacatatttttccttgtaaaaacatggttgtctatttggttgtcaagcaaatagatgttcaaataa 41590415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 31398216 - 31398308
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactc 93  Q
    |||||||| || |||||||||||||||||||||||||||||   ||||||| |||| |||||||| |||||  ||||||||||||||||||||    
T  31398216 actttgattttcgtgccaatacatatttttctttgtaaaaacaaggttgtctatttggttgtcaaacaaataaatgttcaaataacactactc 31398308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 48145616 - 48145697
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactct 94  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||            |||||||||||||||||||||||||||||||||    
T  48145616 actttgatatttgtgccaatacatacttttctttgtaaaaatatggttg------------tcaagcaaattgatgttcaaataacactactct 48145697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 26018149 - 26018226
Alignment:
Q  18 aatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    |||||||| |||||||| ||||||| || ||||| ||||| ||||||||||||| || |||||||||| |||||||||    
T  26018149 aatacatacttttctttataaaaatatgattgtctatttaattgtcaagcaaatagacgttcaaataaaactactcta 26018226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 41590062 - 41589977
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacact 89  Q
    |||||||| |||||||||||||||||||||| || ||||||| || ||||| |||| |||||||| |||||  ||||||||||||||||    
T  41590062 actttgatttttgtgccaatacatatttttccttataaaaatatgattgtctattt-gttgtcaaacaaat--atgttcaaataacact 41589977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42598187 - 42598135
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaa 53  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  42598187 acttagatatttgtgccaatacataattttctttataaaaatgtggttgtcaa 42598135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 40854633 - 40854582
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaa 53  Q
    ||||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  40854633 ctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgtcaa 40854582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 41430105 - 41430045
Alignment:
Q  27 ttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||||||||||||  |||||||| || | |||||||| || ||||||||||||||||||    
T  41430105 ttttctttgtaaaaagatggttgtccatgtggttgtcaatcacattgatgttcaaataaca 41430045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 42584920 - 42584980
Alignment:
Q  27 ttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||||||||||||  |||||||| || | |||||||| || ||||||||||||||||||    
T  42584920 ttttctttgtaaaaagatggttgtccatgtggttgtcaatcacattgatgttcaaataaca 42584980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 36352563 - 36352477
Alignment:
Q  2 ctttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagtt-gtcaagcaaattgatgttcaaataaca 87  Q
    ||||||| || ||| ||||| ||  |||||||||||||||  |||||||| || ||||| ||||| || ||||||||||||||||||    
T  36352563 ctttgattttcgtgtcaatatatgattttctttgtaaaaagatggttgtccatgtagtttgtcaatcacattgatgttcaaataaca 36352477  T

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Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 44651184 - 44651126
Alignment:
Q  26 tttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaata 84  Q
    ||||| ||||||||||| | ||| ||||| ||||||||||  |||||||||||||||||    
T  44651184 tttttttttgtaaaaatatagttatcaatatagttgtcaatgaaattgatgttcaaata 44651126  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 46260056 - 46259979
Alignment:
Q  16 ccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataacactactcta 95  Q
    ||||||||||||||||||||||||||  ||||| || ||||  || ||||||  || ||| || ||||||||||||||||    
T  46260056 ccaatacatatttttctttgtaaaaacatggttatctatttgattctcaagc--atagatcttgaaataacactactcta 46259979  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 47012547 - 47012495
Alignment:
Q  3 tttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatt 55  Q
    |||||| ||||| |||| | ||| |||||||||||||||| ||||||||||||    
T  47012547 tttgatttttgtaccaacatatacttttctttgtaaaaatatggttgtcaatt 47012495  T

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Target: scaffold0687 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 7151 - 7247
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttag-------ttgtcaagcaaattgatgttcaaataacactact 92  Q
    |||||||||||| || |||| |||| |||||||||||||  |||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  7151 actttgatatttatgtcaatgcatacttttctttgtaaa--tgtggttgtcaatttagttgtcatttgtcaagcaaattgatgttcaaataacactact 7247  T

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Target: scaffold0662 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 1245 - 1322
Alignment:
Q  10 tttgtgccaatacatatttttctttgtaaaaatgtggttgtcaatttagttgtcaagcaaattgatgttcaaataaca 87  Q
    |||||||||||| ||| |||||||||||||||| || |||||||| | |||||||| |||| ||||||||||||||||    
T  1245 tttgtgccaatagatacttttctttgtaaaaatatgattgtcaatgtggttgtcaaccaaactgatgttcaaataaca 1322  T

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Target: scaffold0013 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 94861 - 94811
Alignment:
Q  1 actttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgtc 51  Q
    |||||||| ||||||| ||||||||||||||||||||||||| | ||||||    
T  94861 actttgatttttgtgctaatacatatttttctttgtaaaaatatagttgtc 94811  T

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