View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20124_low_3 (Length: 484)
Name: NF20124_low_3
Description: NF20124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20124_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 5 - 440
Target Start/End: Original strand, 45037513 - 45037947
Alignment:
| Q |
5 |
tgacttgatttttcgattttgttcagggatcaaagccttggagatacacagggaaggaagaaaacatgcaaagggaggatataagaatgctagtcaagaa |
104 |
Q |
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| T |
45037513 |
tgacttgatttttcgattttgttcagggatcaaagccttggagatacacagggaaggaagaaaacatgcaaagggaggatataagaatgctagtcaagaa |
45037612 |
T |
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| Q |
105 |
atggtgggatatttacaatgattcatctcttgattacaacaagaatttgagtggaagtggtgaagtacaaacgaatggtgttgaaattgagccattcgta |
204 |
Q |
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| T |
45037613 |
atggtgggatatttacaatgattcatctcttgattacaacaagaatttgagtggaagtggtgaagtacaaacgaatggttttgaaattgagccattcgta |
45037712 |
T |
|
| Q |
205 |
caagcattgtctgaggtaggtcgtgttcaatatgtcacagcaccttcagcagcttaaactgagctgttttttggtgaccattcattcgtgcaatggaagc |
304 |
Q |
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| T |
45037713 |
caagcattgtctgaggtaggtcgtgttcaatatgtcacagcaccttcagcagcttaaactgagctgttttttggtgaccattcattcgtgcaatggaagc |
45037812 |
T |
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| Q |
305 |
aaaaacataaaaaatgaagtaaggaataacgatggaaattattatggaagtgagtaaaaaagtttaggtgcaaccgttctagaannnnnnncaagaccag |
404 |
Q |
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| T |
45037813 |
aaaaacataaaaaatgaagtaaggaataacgatggaaattattatggaagtgagt-aaaaagtttaggtgcaaccgttcaagaatttttttcaagacaag |
45037911 |
T |
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| Q |
405 |
gggaaatggttggtgctatatttcagcttttgtgtg |
440 |
Q |
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| T |
45037912 |
gggaaatggttggtgctatatttcagcttttgtgtg |
45037947 |
T |
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