View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20125_high_5 (Length: 479)
Name: NF20125_high_5
Description: NF20125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20125_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 161; Significance: 1e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 11463656 - 11463836
Alignment:
| Q |
16 |
atgaacaagcaattcgtgttattattattaaaacacaaacctttcctgatgattgtccgtacccagaataatcatacctgcaacaaattatataacttag |
115 |
Q |
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| T |
11463656 |
atgaacaagcaattcgtgttattgttattaaaacacaaacctttcctgatgattgtccgtacccagaataatcatacctgcaacaaattatataacttag |
11463755 |
T |
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| Q |
116 |
cataaggaaaactatcatttttcactcatcttgtgtggttcttaatgtgtcataaacataaacttgaacagacaacaaaat |
196 |
Q |
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| T |
11463756 |
cataagaaaaactatcattttttactcctcttgtgtggttcttaatgtgtcatgaacataaacttgaacagacaacaaaat |
11463836 |
T |
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