View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20125_low_24 (Length: 262)

Name: NF20125_low_24
Description: NF20125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20125_low_24
NF20125_low_24
[»] chr1 (46 HSPs)
chr1 (18-144)||(4064181-4064307)
chr1 (187-249)||(33905636-33905698)
chr1 (195-249)||(4621363-4621417)
chr1 (195-249)||(7197372-7197426)
chr1 (195-249)||(24674410-24674464)
chr1 (187-249)||(45859169-45859231)
chr1 (195-246)||(8077664-8077715)
chr1 (195-246)||(27454995-27455046)
chr1 (195-249)||(7578426-7578480)
chr1 (195-249)||(7766853-7766907)
chr1 (195-249)||(24122040-24122094)
chr1 (195-249)||(34778359-34778413)
chr1 (195-249)||(46113528-46113582)
chr1 (195-247)||(17935786-17935838)
chr1 (187-247)||(37351589-37351649)
chr1 (195-246)||(15059531-15059582)
chr1 (195-249)||(20487316-20487370)
chr1 (195-249)||(46607827-46607881)
chr1 (197-246)||(9500484-9500533)
chr1 (196-249)||(23734134-23734187)
chr1 (196-249)||(23741326-23741379)
chr1 (202-249)||(36156014-36156061)
chr1 (195-249)||(7946861-7946915)
chr1 (195-249)||(14258553-14258607)
chr1 (202-252)||(21726753-21726803)
chr1 (195-249)||(29057463-29057517)
chr1 (196-249)||(1818752-1818805)
chr1 (195-246)||(18646870-18646921)
chr1 (195-249)||(168218-168272)
chr1 (195-249)||(2272361-2272415)
chr1 (195-249)||(23232391-23232445)
chr1 (195-249)||(30677193-30677247)
chr1 (202-245)||(8779866-8779909)
chr1 (195-245)||(1378915-1378965)
chr1 (195-249)||(32729562-32729616)
chr1 (184-249)||(16539614-16539679)
chr1 (195-252)||(24216995-24217052)
chr1 (197-249)||(25496614-25496666)
chr1 (202-249)||(25237115-25237162)
chr1 (195-245)||(1378762-1378812)
chr1 (195-252)||(1486437-1486492)
chr1 (196-246)||(15581142-15581192)
chr1 (195-245)||(19034516-19034566)
chr1 (195-245)||(32930766-32930816)
chr1 (197-252)||(15786314-15786370)
chr1 (196-248)||(37047010-37047062)
[»] chr8 (36 HSPs)
chr8 (184-249)||(14632964-14633029)
chr8 (178-249)||(20469921-20469992)
chr8 (195-249)||(18532128-18532182)
chr8 (195-249)||(28193495-28193549)
chr8 (195-249)||(34237781-34237835)
chr8 (195-249)||(39349277-39349331)
chr8 (195-249)||(3734749-3734803)
chr8 (195-249)||(4718666-4718720)
chr8 (195-249)||(19471630-19471684)
chr8 (195-249)||(19542554-19542608)
chr8 (195-249)||(19590088-19590142)
chr8 (195-249)||(21603251-21603305)
chr8 (195-252)||(27746458-27746515)
chr8 (195-249)||(264525-264579)
chr8 (195-249)||(651342-651396)
chr8 (195-249)||(837077-837131)
chr8 (195-249)||(2618207-2618261)
chr8 (195-249)||(4698849-4698903)
chr8 (195-249)||(15259532-15259586)
chr8 (195-249)||(42643244-42643298)
chr8 (195-249)||(32879300-32879354)
chr8 (196-249)||(2166721-2166774)
chr8 (195-252)||(28088307-28088364)
chr8 (197-249)||(8765652-8765704)
chr8 (195-247)||(20305929-20305981)
chr8 (195-247)||(21092562-21092614)
chr8 (197-244)||(8042677-8042724)
chr8 (195-245)||(24018403-24018453)
chr8 (195-249)||(42328026-42328079)
chr8 (200-245)||(7558073-7558118)
chr8 (186-249)||(34610813-34610876)
chr8 (195-252)||(21667571-21667628)
chr8 (195-247)||(26168976-26169028)
chr8 (195-244)||(34639337-34639386)
chr8 (195-252)||(41070782-41070839)
chr8 (195-247)||(34694704-34694756)
[»] chr5 (45 HSPs)
chr5 (184-249)||(12398574-12398639)
chr5 (184-244)||(19456340-19456400)
chr5 (195-249)||(15641231-15641285)
chr5 (195-249)||(22392718-22392772)
chr5 (184-249)||(7151335-7151400)
chr5 (196-247)||(34049840-34049891)
chr5 (195-249)||(1827656-1827710)
chr5 (195-249)||(8484787-8484841)
chr5 (195-249)||(13038580-13038634)
chr5 (195-249)||(13108575-13108629)
chr5 (195-245)||(15971252-15971302)
chr5 (195-245)||(25586949-25586999)
chr5 (195-249)||(33709627-33709681)
chr5 (195-249)||(37495064-37495118)
chr5 (195-249)||(38631087-38631141)
chr5 (195-249)||(38684225-38684279)
chr5 (195-252)||(31288069-31288126)
chr5 (197-249)||(18207226-18207278)
chr5 (195-247)||(32059568-32059620)
chr5 (195-246)||(30485845-30485896)
chr5 (195-258)||(36954835-36954898)
chr5 (195-249)||(7085752-7085806)
chr5 (195-249)||(11926628-11926682)
chr5 (195-249)||(27498857-27498911)
chr5 (199-249)||(34310163-34310213)
chr5 (195-247)||(4603794-4603846)
chr5 (197-245)||(6014410-6014458)
chr5 (195-247)||(10869693-10869745)
chr5 (195-245)||(5067318-5067368)
chr5 (187-249)||(17015539-17015601)
chr5 (195-245)||(23270652-23270702)
chr5 (195-245)||(42193502-42193552)
chr5 (195-236)||(25750750-25750791)
chr5 (195-248)||(37397730-37397783)
chr5 (194-248)||(15485418-15485472)
chr5 (195-249)||(15931076-15931130)
chr5 (180-245)||(3639773-3639838)
chr5 (196-245)||(16616137-16616186)
chr5 (197-245)||(11465037-11465085)
chr5 (195-229)||(3715055-3715089)
chr5 (195-245)||(12317280-12317330)
chr5 (195-249)||(19145537-19145591)
chr5 (202-240)||(27487690-27487728)
chr5 (195-245)||(28614614-28614664)
chr5 (196-245)||(14656645-14656694)
[»] chr4 (44 HSPs)
chr4 (184-249)||(7392089-7392154)
chr4 (195-252)||(1985853-1985910)
chr4 (195-249)||(27528921-27528975)
chr4 (195-247)||(35229185-35229237)
chr4 (195-249)||(22625196-22625250)
chr4 (195-249)||(25852231-25852285)
chr4 (195-249)||(32986214-32986268)
chr4 (195-249)||(33696405-33696459)
chr4 (195-245)||(46714409-46714459)
chr4 (195-249)||(52983636-52983690)
chr4 (196-248)||(20078111-20078163)
chr4 (195-246)||(19660661-19660712)
chr4 (195-246)||(40058981-40059032)
chr4 (195-246)||(49287875-49287926)
chr4 (195-249)||(2351030-2351084)
chr4 (195-249)||(51535630-51535684)
chr4 (195-249)||(54127468-54127522)
chr4 (195-249)||(20566366-20566421)
chr4 (195-246)||(33992643-33992694)
chr4 (195-246)||(34844887-34844938)
chr4 (195-249)||(13873421-13873475)
chr4 (195-249)||(35674867-35674921)
chr4 (195-246)||(5609331-5609382)
chr4 (195-246)||(43719194-43719245)
chr4 (195-234)||(55961883-55961922)
chr4 (195-249)||(45787830-45787883)
chr4 (197-249)||(44343533-44343585)
chr4 (202-249)||(12500184-12500231)
chr4 (195-246)||(32942387-32942438)
chr4 (195-230)||(34722187-34722222)
chr4 (195-249)||(34835546-34835600)
chr4 (195-249)||(36131636-36131690)
chr4 (195-249)||(42245763-42245817)
chr4 (195-251)||(12710196-12710252)
chr4 (186-249)||(30879291-30879354)
chr4 (190-225)||(39288878-39288913)
chr4 (195-249)||(13584380-13584434)
chr4 (197-246)||(30938219-30938269)
chr4 (196-246)||(37980148-37980198)
chr4 (196-246)||(56409976-56410026)
chr4 (196-249)||(20527159-20527212)
chr4 (197-249)||(38869794-38869847)
chr4 (198-246)||(39509097-39509146)
chr4 (35-84)||(45654775-45654824)
[»] chr2 (42 HSPs)
chr2 (184-249)||(43374451-43374516)
chr2 (184-249)||(36242438-36242503)
chr2 (195-252)||(44946176-44946233)
chr2 (195-250)||(27290605-27290660)
chr2 (187-249)||(5394026-5394088)
chr2 (195-249)||(10582116-10582170)
chr2 (195-249)||(11941336-11941390)
chr2 (195-249)||(18976551-18976605)
chr2 (195-249)||(33827699-33827753)
chr2 (195-249)||(41314009-41314063)
chr2 (195-249)||(44976280-44976334)
chr2 (184-249)||(1191520-1191584)
chr2 (184-249)||(45271390-45271455)
chr2 (195-246)||(34516537-34516588)
chr2 (195-249)||(17324783-17324837)
chr2 (195-249)||(25293183-25293237)
chr2 (195-252)||(15037976-15038033)
chr2 (195-247)||(6714409-6714461)
chr2 (195-249)||(4852575-4852629)
chr2 (209-249)||(35171831-35171871)
chr2 (206-249)||(8258925-8258968)
chr2 (187-246)||(13266499-13266558)
chr2 (195-249)||(8192477-8192531)
chr2 (195-249)||(24196021-24196075)
chr2 (196-245)||(4567567-4567616)
chr2 (200-249)||(32845113-32845162)
chr2 (195-248)||(40997477-40997530)
chr2 (195-244)||(44610091-44610140)
chr2 (195-246)||(30466959-30467010)
chr2 (197-247)||(19054044-19054094)
chr2 (195-249)||(19605971-19606025)
chr2 (184-225)||(29698153-29698194)
chr2 (202-251)||(32526209-32526258)
chr2 (187-248)||(38341746-38341807)
chr2 (194-246)||(6099519-6099571)
chr2 (195-247)||(19849850-19849902)
chr2 (202-249)||(41329867-41329914)
chr2 (195-225)||(1845807-1845837)
chr2 (195-249)||(27269476-27269530)
chr2 (197-239)||(29361573-29361615)
chr2 (197-246)||(28194262-28194311)
chr2 (196-240)||(13747640-13747684)
[»] chr3 (50 HSPs)
chr3 (181-249)||(10083945-10084013)
chr3 (181-249)||(10190868-10190936)
chr3 (195-252)||(53424299-53424356)
chr3 (195-249)||(25289840-25289894)
chr3 (195-249)||(26108309-26108363)
chr3 (195-249)||(30807279-30807333)
chr3 (195-249)||(35492928-35492982)
chr3 (195-249)||(40940842-40940896)
chr3 (195-249)||(45529880-45529934)
chr3 (195-249)||(46576365-46576419)
chr3 (195-252)||(30257641-30257698)
chr3 (195-247)||(25379778-25379830)
chr3 (195-254)||(34492696-34492755)
chr3 (195-249)||(8456276-8456330)
chr3 (195-249)||(15566625-15566679)
chr3 (195-249)||(21362960-21363014)
chr3 (195-245)||(26174130-26174180)
chr3 (195-249)||(49258388-49258442)
chr3 (195-249)||(52455775-52455829)
chr3 (195-249)||(52821761-52821815)
chr3 (195-246)||(53234039-53234090)
chr3 (195-249)||(7485651-7485705)
chr3 (195-245)||(29915399-29915449)
chr3 (195-245)||(29964552-29964602)
chr3 (195-249)||(40133575-40133629)
chr3 (195-252)||(19857069-19857125)
chr3 (196-249)||(45272542-45272595)
chr3 (195-247)||(48977405-48977457)
chr3 (195-249)||(7470341-7470395)
chr3 (202-248)||(9853640-9853686)
chr3 (195-249)||(31537964-31538018)
chr3 (200-246)||(39041981-39042027)
chr3 (195-252)||(25344180-25344237)
chr3 (207-247)||(1692863-1692903)
chr3 (195-249)||(18177013-18177067)
chr3 (195-249)||(55287820-55287874)
chr3 (195-246)||(38732983-38733034)
chr3 (195-246)||(49167073-49167124)
chr3 (195-245)||(14343418-14343468)
chr3 (195-249)||(53288838-53288892)
chr3 (184-245)||(8958166-8958227)
chr3 (195-248)||(9842938-9842990)
chr3 (196-247)||(25017534-25017584)
chr3 (195-246)||(32151441-32151492)
chr3 (195-249)||(4462650-4462704)
chr3 (197-246)||(47454617-47454667)
chr3 (195-245)||(50583009-50583059)
chr3 (196-249)||(34844396-34844449)
chr3 (196-252)||(26158836-26158892)
chr3 (198-245)||(44743856-44743904)
[»] scaffold0623 (1 HSPs)
scaffold0623 (195-249)||(1182-1236)
[»] scaffold0366 (2 HSPs)
scaffold0366 (195-249)||(9425-9479)
scaffold0366 (195-245)||(12130-12180)
[»] chr7 (50 HSPs)
chr7 (195-249)||(2103076-2103130)
chr7 (195-249)||(7175988-7176042)
chr7 (195-249)||(7275298-7275352)
chr7 (195-249)||(7799958-7800012)
chr7 (195-249)||(10091209-10091263)
chr7 (195-249)||(21217959-21218013)
chr7 (195-249)||(22119909-22119963)
chr7 (195-249)||(22703507-22703561)
chr7 (195-249)||(40543036-40543090)
chr7 (195-246)||(23854417-23854468)
chr7 (195-249)||(2751292-2751346)
chr7 (195-249)||(11997870-11997924)
chr7 (195-249)||(18044128-18044182)
chr7 (195-249)||(21835172-21835226)
chr7 (195-249)||(22299870-22299924)
chr7 (195-246)||(17212074-17212125)
chr7 (195-249)||(13332549-13332603)
chr7 (195-245)||(19421252-19421302)
chr7 (195-249)||(25333440-25333494)
chr7 (195-249)||(27312173-27312227)
chr7 (195-245)||(42913643-42913693)
chr7 (195-249)||(23012634-23012688)
chr7 (195-249)||(27009380-27009434)
chr7 (195-249)||(28089837-28089891)
chr7 (195-249)||(32849612-32849666)
chr7 (195-252)||(27704023-27704080)
chr7 (196-249)||(31273936-31273989)
chr7 (195-247)||(2344320-2344372)
chr7 (202-249)||(14199792-14199839)
chr7 (195-246)||(31197612-31197663)
chr7 (195-249)||(17197076-17197130)
chr7 (195-249)||(21370618-21370672)
chr7 (195-249)||(39145778-39145832)
chr7 (195-249)||(42814885-42814939)
chr7 (195-240)||(28003857-28003902)
chr7 (195-248)||(43785426-43785479)
chr7 (195-238)||(31713032-31713075)
chr7 (195-245)||(40332120-40332170)
chr7 (214-249)||(16374034-16374069)
chr7 (194-249)||(22264628-22264683)
chr7 (195-249)||(28950889-28950946)
chr7 (206-245)||(36772432-36772471)
chr7 (196-246)||(37473639-37473690)
chr7 (195-249)||(9718113-9718167)
chr7 (195-249)||(22638313-22638367)
chr7 (216-249)||(654830-654863)
chr7 (197-246)||(15905674-15905723)
chr7 (196-241)||(48125180-48125225)
chr7 (197-245)||(48771964-48772013)
chr7 (201-249)||(28646996-28647044)
[»] chr6 (29 HSPs)
chr6 (195-249)||(9238992-9239046)
chr6 (195-246)||(11448888-11448939)
chr6 (187-246)||(28968171-28968230)
chr6 (195-249)||(12591654-12591708)
chr6 (195-249)||(14212909-14212963)
chr6 (195-249)||(15360224-15360278)
chr6 (195-249)||(22576084-22576138)
chr6 (201-249)||(654272-654320)
chr6 (183-247)||(17706435-17706499)
chr6 (195-246)||(11007182-11007233)
chr6 (195-249)||(5360197-5360251)
chr6 (195-249)||(34147363-34147417)
chr6 (195-249)||(34159979-34160033)
chr6 (195-248)||(21982447-21982500)
chr6 (195-243)||(9843955-9844003)
chr6 (195-246)||(13753257-13753308)
chr6 (203-249)||(1344960-1345006)
chr6 (195-249)||(3222761-3222814)
chr6 (195-249)||(11840918-11840972)
chr6 (195-249)||(17081180-17081234)
chr6 (195-249)||(21148636-21148690)
chr6 (195-249)||(28672084-28672138)
chr6 (195-248)||(9208269-9208322)
chr6 (195-249)||(33499491-33499546)
chr6 (195-246)||(33718587-33718638)
chr6 (195-249)||(17149582-17149636)
chr6 (218-249)||(12390465-12390496)
chr6 (195-245)||(9690768-9690818)
chr6 (194-246)||(28741970-28742022)
[»] scaffold0019 (1 HSPs)
scaffold0019 (197-249)||(161828-161880)
[»] scaffold0576 (1 HSPs)
scaffold0576 (195-249)||(5208-5262)
[»] scaffold0459 (1 HSPs)
scaffold0459 (195-245)||(10823-10873)
[»] scaffold0199 (1 HSPs)
scaffold0199 (195-245)||(8537-8587)
[»] scaffold0068 (1 HSPs)
scaffold0068 (195-249)||(41770-41824)
[»] scaffold0217 (1 HSPs)
scaffold0217 (196-249)||(7435-7488)
[»] scaffold0717 (1 HSPs)
scaffold0717 (195-249)||(84-138)
[»] scaffold0460 (1 HSPs)
scaffold0460 (195-249)||(8305-8359)
[»] scaffold0328 (1 HSPs)
scaffold0328 (195-249)||(15008-15062)
[»] scaffold0070 (1 HSPs)
scaffold0070 (195-249)||(40342-40396)
[»] scaffold0051 (1 HSPs)
scaffold0051 (195-249)||(52997-53051)
[»] scaffold0026 (1 HSPs)
scaffold0026 (195-249)||(97492-97546)
[»] scaffold0049 (1 HSPs)
scaffold0049 (195-247)||(66779-66831)
[»] scaffold0240 (1 HSPs)
scaffold0240 (195-245)||(12884-12934)
[»] scaffold0157 (1 HSPs)
scaffold0157 (202-249)||(20246-20293)
[»] scaffold0299 (1 HSPs)
scaffold0299 (197-246)||(11554-11604)
[»] scaffold0028 (1 HSPs)
scaffold0028 (195-249)||(27793-27847)
[»] scaffold0102 (1 HSPs)
scaffold0102 (217-249)||(39131-39163)


Alignment Details
Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 4064307 - 4064181
Alignment:
Q  18 aaggagtgtcctaaaggcattgtttaaggattttattaaaggaaatttggtcatgaaaatacaagttattaccnnnnnnnnnngaaaggacaagttatta 117  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||    
T  4064307 aaggagtgtcctaaaggcattgtttaaagattttattaaaggaaatttggtcatgaaaatacaagttattacttcttttttttgaaaggacaagttatta 4064208  T
Q  118 attttgtcaatgtaataattacacaac 144  Q
     ||||||||||||||||||||||||||    
T  4064207 cttttgtcaatgtaataattacacaac 4064181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 33905698 - 33905636
Alignment:
Q  187 ccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33905698 ccatttagggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 33905636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 4621417 - 4621363
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4621417 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 4621363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 7197426 - 7197372
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7197426 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 7197372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 24674410 - 24674464
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24674410 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 24674464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 45859231 - 45859169
Alignment:
Q  187 ccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45859231 ccatttggagttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccct 45859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 8077664 - 8077715
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8077664 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 8077715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 27455046 - 27454995
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27455046 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 27454995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 7578426 - 7578480
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7578426 ggttggcttgggatcttggagtttgttcctccagaggtctcaggttcgattccct 7578480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 7766907 - 7766853
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7766907 ggttagcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 7766853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 24122040 - 24122094
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24122040 ggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccct 24122094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 34778359 - 34778413
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34778359 ggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccct 34778413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 46113582 - 46113528
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46113582 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 46113528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 17935786 - 17935838
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17935786 ggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 17935838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 37351649 - 37351589
Alignment:
Q  187 ccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    ||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  37351649 ccatttgtggttggcttgggatcttggagtttgctcctccaaatgtctcaggttcgattcc 37351589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 15059582 - 15059531
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15059582 ggttggcttggaatcttggagtttgctcctccagaggtctcaggttcgattc 15059531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 20487370 - 20487316
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  20487370 ggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccct 20487316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 46607827 - 46607881
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  46607827 ggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 46607881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 9500533 - 9500484
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9500533 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattc 9500484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 23734134 - 23734187
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  23734134 gttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccct 23734187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 23741326 - 23741379
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  23741326 gttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccct 23741379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 36156061 - 36156014
Alignment:
Q  202 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36156061 ttgggatcttggagtttgctcctccagaggtgtcaggttcgattccct 36156014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 7946861 - 7946915
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  7946861 ggttggcttgagatcttgaagtttgctcctccagaggtctcaagttcgattccct 7946915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 14258607 - 14258553
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  14258607 ggttggcttgggatcttggagtttgttcctccagatgtctctggttcgattccct 14258553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 21726753 - 21726803
Alignment:
Q  202 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  21726753 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctttg 21726803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 29057517 - 29057463
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  29057517 ggttggtttgggatcttggagtttgctgctccaaaggtctcaggttcgattccct 29057463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 1818752 - 1818805
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||||||||||||    
T  1818752 gttggcttaggatcttggagtttgctcttccagaggtttcaggttcgattccct 1818805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 18646870 - 18646921
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  18646870 ggttggcttgtgatctttgagtttgcttctccagaggtctcaggttcgattc 18646921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 168218 - 168272
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||| |||||||||| | || |||||||||||||||||||||    
T  168218 ggttggcttgggatcttagagtttgctctttcaaaggtctcaggttcgattccct 168272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 2272361 - 2272415
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| ||||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  2272361 ggttgacttgggatcttagagtttgctcctacagaggtctcaggtttgattccct 2272415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 23232445 - 23232391
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| |||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  23232445 ggttgacttgggatcttgaagtttgctcttccagaggtttcaggttcgattccct 23232391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 30677193 - 30677247
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||| ||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  30677193 ggttggtttgggatctaggagtttgctcctccaaaggtctcaggtttgattccct 30677247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 8779909 - 8779866
Alignment:
Q  202 ttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  8779909 ttgggatcttggagtttgcttctccagaggtctcagcttcgatt 8779866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 1378915 - 1378965
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||| ||||||||||||||||||||||||||| | |||||| ||||||||    
T  1378915 ggttgacttgggatcttggagtttgctcctccaaaagtctcatgttcgatt 1378965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 32729562 - 32729616
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||| |||||||||||||   | |||||||||||||||||||    
T  32729562 ggttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccct 32729616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 16539614 - 16539679
Alignment:
Q  184 aacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||| |||||||||||||||  ||||||    |||||||||||| ||||||||    
T  16539614 aacccatttggggttggtttgggatcttggagtgagctccttgcaaggtctcaggtttgattccct 16539679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 24216995 - 24217052
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    ||||| |||||||||||||||| ||||||||   ||||||||||||||||| ||||||    
T  24216995 ggttgacttgggatcttggagtgtgctcctctcaaggtctcaggttcgattacctttg 24217052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 25496666 - 25496614
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||| |||||||||   |||||||| ||||||||||||    
T  25496666 ttggcttgggatcttggagattgctcctcttaaggtctcaagttcgattccct 25496614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 25237162 - 25237115
Alignment:
Q  202 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||| |||   |||||||||||||||||||||    
T  25237162 ttgggatcttggagtttgcttctctcaaggtctcaggttcgattccct 25237115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 1378762 - 1378812
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||| ||||| |||||||||||| |||||||| |||||||| ||||||||    
T  1378762 ggttgacttggaatcttggagtttactcctccaaaggtctcatgttcgatt 1378812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 1486437 - 1486492
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    ||||||||||||||||||||||  ||| |||   ||||||||||||||||||||||||    
T  1486437 ggttggcttgggatcttggagt--gctactctcaaggtctcaggttcgattccctttg 1486492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 15581192 - 15581142
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||||||||| |||||||| |||||||| | ||||||||||||| ||||    
T  15581192 gttggcttgggaccttggagtgtgctcctctaaaggtctcaggttcaattc 15581142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 19034566 - 19034516
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||| |||||||||||||||||| ||||| | |||| ||||||||||||    
T  19034566 ggttggtttgggatcttggagtttgttcctcaaaaggtttcaggttcgatt 19034516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 32930766 - 32930816
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||| |||| |||||||||||| ||||| ||||||||||| ||||||||    
T  32930766 ggttggtttggaatcttggagtttactccttcagaggtctcaagttcgatt 32930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 15786370 - 15786314
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctcc-agaggtctcaggttcgattccctttg 252  Q
    |||||||||||||| ||||| |||||||||   |||||||||||||||||| |||||    
T  15786370 ttggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttg 15786314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 37047010 - 37047062
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 248  Q
    |||||||||||| |||||||| ||||||||   |||||||||||| |||||||    
T  37047010 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggtttgattccc 37047062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 14632964 - 14633029
Alignment:
Q  184 aacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14632964 aacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 14633029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 20469921 - 20469992
Alignment:
Q  178 acttttaacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20469921 acttataacccatttgggattggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 20469992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 18532128 - 18532182
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532128 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 18532182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 28193495 - 28193549
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28193495 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 28193549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 34237835 - 34237781
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34237835 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 34237781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 39349277 - 39349331
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39349277 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 39349331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 3734803 - 3734749
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3734803 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 3734749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 4718666 - 4718720
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4718666 ggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccct 4718720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 19471630 - 19471684
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19471630 ggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccct 19471684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 19542554 - 19542608
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19542554 ggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccct 19542608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 19590142 - 19590088
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19590142 ggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccct 19590088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 21603251 - 21603305
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21603251 ggttggcttgggatcttagagtttgctcctccagaggtctcaggttcgattccct 21603305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 27746515 - 27746458
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27746515 ggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttg 27746458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 264579 - 264525
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  264579 ggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccct 264525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 651342 - 651396
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  651342 ggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccct 651396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 837077 - 837131
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  837077 ggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccct 837131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 2618207 - 2618261
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  2618207 ggttggcttgggatcttggagtttgctcctccagaggtcttgggttcgattccct 2618261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 4698903 - 4698849
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4698903 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattccct 4698849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 15259586 - 15259532
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15259586 ggttggtttgggatcttggattttgctcctccagaggtctcaggttcgattccct 15259532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 42643298 - 42643244
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42643298 ggttgacttgggatcttggagtttgctcctccagaggtctcagattcgattccct 42643244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 32879300 - 32879354
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  32879300 ggttgacttgggatcttcgagtttggtcctccagaggtctcaggttcgattccct 32879354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 2166721 - 2166774
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  2166721 gttggtttgggatcttggagtttgcttctccaaaggtctcaggttcgattccct 2166774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 28088307 - 28088364
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    ||||| ||||||||||||||||||| || |||||||||||||| ||||||||||||||    
T  28088307 ggttgacttgggatcttggagtttgttcatccagaggtctcagattcgattccctttg 28088364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 8765704 - 8765652
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||| |||||||||||||||||| |||||| ||||||||||||||||||    
T  8765704 ttggcttgagatcttggagtttgctcccccagagatctcaggttcgattccct 8765652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 20305929 - 20305981
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  20305929 ggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattcc 20305981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 21092562 - 21092614
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  21092562 ggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattcc 21092614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 8042677 - 8042724
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgat 244  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  8042677 ttggcttgggatcttggagtttgctcctccaaaagtctcaggttcgat 8042724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 24018403 - 24018453
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  24018403 ggttgacttgggatcttggagtttgctcctccaaaggtctgaggttcgatt 24018453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 42328026 - 42328079
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  42328026 ggttggcttgggatcttggagttt-ctcctccagaggtgtcaggtttgattccct 42328079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 7558118 - 7558073
Alignment:
Q  200 gcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||    
T  7558118 gcttgggatcttggagtttgctcctccagaagtctcagattcgatt 7558073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 34610876 - 34610813
Alignment:
Q  186 cccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||| ||||||||| |||| |||||||||| || |||||| |||| ||||||||||||||    
T  34610876 cccatttgtggttggcttaggattttggagtttgttcatccagatgtctgaggttcgattccct 34610813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 21667571 - 21667628
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    ||||||||||| ||||||||| ||||||||||| || | |||||||||||| ||||||    
T  21667571 ggttggcttggaatcttggaggttgctcctccaaagatttcaggttcgatttcctttg 21667628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 26169028 - 26168976
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    |||| ||||||||||||||||||||||||||   |||||||||||| ||||||    
T  26169028 ggtttgcttgggatcttggagtttgctcctctcaaggtctcaggtttgattcc 26168976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 34639386 - 34639337
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgat 244  Q
    |||||||||||||||||||||| ||||||||   |||||||||| |||||    
T  34639386 ggttggcttgggatcttggagtgtgctcctctcaaggtctcaggctcgat 34639337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 41070782 - 41070839
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    ||||| |||||||||||||||| |||| |||   |||||||| |||||||||||||||    
T  41070782 ggttgacttgggatcttggagtgtgctactctcaaggtctcaagttcgattccctttg 41070839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 34694756 - 34694704
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    ||||| |||| ||||||||||||||||||||   |||||| ||||||||||||    
T  34694756 ggttgacttgtgatcttggagtttgctcctctcaaggtcttaggttcgattcc 34694704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 12398639 - 12398574
Alignment:
Q  184 aacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12398639 aacccatttggggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 12398574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 19456400 - 19456340
Alignment:
Q  184 aacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgat 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19456400 aacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgat 19456340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 15641285 - 15641231
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15641285 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 15641231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 22392718 - 22392772
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22392718 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 22392772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 7151335 - 7151400
Alignment:
Q  184 aacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  7151335 aacccatttggggttggcttgggatcttggagtttgctcctcaagaggtcttaggttcgactccct 7151400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 34049840 - 34049891
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34049840 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 34049891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 1827710 - 1827656
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1827710 ggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccct 1827656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 8484841 - 8484787
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8484841 ggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccct 8484787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 13038634 - 13038580
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13038634 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 13038580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 13108629 - 13108575
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13108629 ggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccct 13108575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 15971302 - 15971252
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15971302 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 15971252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 25586949 - 25586999
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25586949 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 25586999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 33709681 - 33709627
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33709681 ggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccct 33709627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 37495064 - 37495118
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37495064 ggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccct 37495118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 38631141 - 38631087
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38631141 ggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccct 38631087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 38684225 - 38684279
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38684225 ggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 38684279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 31288126 - 31288069
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  31288126 ggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccctttg 31288069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 18207226 - 18207278
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18207226 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 18207278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 32059620 - 32059568
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32059620 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattcc 32059568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 30485845 - 30485896
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30485845 ggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattc 30485896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 36954835 - 36954898
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttgcttcta 258  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||    
T  36954835 ggttgccttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggttcta 36954898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 7085806 - 7085752
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  7085806 ggttggcttgggatcttggagttttctcctccagaggtctccggttcgattccct 7085752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 11926682 - 11926628
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11926682 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttagattccct 11926628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 27498911 - 27498857
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  27498911 ggttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccct 27498857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 34310163 - 34310213
Alignment:
Q  199 ggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34310163 ggcttggaatcttggagtttgctcctccagaggtctcaggttcgattccct 34310213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 4603794 - 4603846
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    ||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  4603794 ggttggcttgggatcttggagtttgctcctccaaagatctcaagttcgattcc 4603846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 6014458 - 6014410
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  6014458 ttggcttgggatcttggagtttgcttctccagagatctcaggttcgatt 6014410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 10869745 - 10869693
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    ||||| |||| |||||||||||||||||||||| |||||||||||||||||||    
T  10869745 ggttgacttgcgatcttggagtttgctcctccaaaggtctcaggttcgattcc 10869693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 5067318 - 5067368
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  5067318 ggttgacttgggatcttcgagtttgctcctccagagatctcaggttcgatt 5067368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 17015601 - 17015539
Alignment:
Q  187 ccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||| ||||||| ||||| ||| | ||||||||||||||| ||||||||    
T  17015601 ccatttggggttggcttgagatcttgaagtttcctctttcagaggtctcaggtttgattccct 17015539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 23270702 - 23270652
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  23270702 ggttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatt 23270652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 42193502 - 42193552
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||| ||||||||||||||||||||| | |||||||||||||||||||||    
T  42193502 ggttgacttgggatcttggagtttgcttccccagaggtctcaggttcgatt 42193552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 25750791 - 25750750
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctca 236  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  25750791 ggttgacttgggatcttggagtttgctcctccagaggtctca 25750750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 37397730 - 37397783
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 248  Q
    |||||||||| |||||||||||||||||||||| |||||| ||||| |||||||    
T  37397730 ggttggcttgtgatcttggagtttgctcctccaaaggtctaaggtttgattccc 37397783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 15485472 - 15485418
Alignment:
Q  194 gggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 248  Q
    |||||||||||||| |||||||| ||||||||   ||||||||||||||||||||    
T  15485472 gggttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattccc 15485418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 15931076 - 15931130
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||| |||||||||||||||||||||| || || | |||||||||||||||||||    
T  15931076 ggttagcttgggatcttggagtttgcttcttcacaagtctcaggttcgattccct 15931130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 3639773 - 3639838
Alignment:
Q  180 ttttaacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||| ||   |||||| ||||||||||    
T  3639773 ttttaactcatttggggttggcttgagattttggagtttgctcttctccaggtcttaggttcgatt 3639838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 16616137 - 16616186
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||||||||||||||||||||||||||| | || |||||| |||||||    
T  16616137 gttggcttgggatcttggagtttgctcctctaaagatctcagattcgatt 16616186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 11465085 - 11465037
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||||||  ||||||||||||||||||||| | |||||||||||||||    
T  11465085 ttggcttgaaatcttggagtttgctcctccaaatgtctcaggttcgatt 11465037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 229
Target Start/End: Complemental strand, 3715089 - 3715055
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccaga 229  Q
    |||||| ||||||||||||||||||||||||||||    
T  3715089 ggttggtttgggatcttggagtttgctcctccaga 3715055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 12317330 - 12317280
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||||||||| |||||||||||||||||||  |||||||| |||| ||||    
T  12317330 ggttggcttggaatcttggagtttgctcctcttgaggtctcgggtttgatt 12317280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 19145591 - 19145537
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| |||||||||||||||| ||||||||   ||||||| |||||||||||||    
T  19145591 ggttgacttgggatcttggagtatgctcctctcaaggtctccggttcgattccct 19145537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 27487728 - 27487690
Alignment:
Q  202 ttgggatcttggagtttgctcctccagaggtctcaggtt 240  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  27487728 ttgggattttggagtttgctcttccagaggtctcaggtt 27487690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 28614664 - 28614614
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||||||| |||||| ||||||| ||||||| || ||||||||||||||    
T  28614664 ggttggcttgagatcttagagtttgttcctccaaagatctcaggttcgatt 28614614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 14656694 - 14656645
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||||||| || |||||||||||||||||   |||||||||||||||||    
T  14656694 gttggcttgagaccttggagtttgctcctctcaaggtctcaggttcgatt 14656645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 7e-27; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 7392154 - 7392089
Alignment:
Q  184 aacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7392154 aacccatttggggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 7392089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 1985853 - 1985910
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1985853 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 1985910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 27528975 - 27528921
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27528975 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 27528921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 35229185 - 35229237
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35229185 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 35229237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 22625250 - 22625196
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22625250 ggttggcttgggatcttggagtttactcctccagaggtctcaggttcgattccct 22625196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 25852231 - 25852285
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25852231 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 25852285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 32986214 - 32986268
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32986214 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccct 32986268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 33696459 - 33696405
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33696459 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccct 33696405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 46714409 - 46714459
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46714409 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 46714459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 52983636 - 52983690
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  52983636 ggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccct 52983690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 20078163 - 20078111
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20078163 gttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccc 20078111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 19660712 - 19660661
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19660712 ggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattc 19660661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 40059032 - 40058981
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40059032 ggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattc 40058981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 49287875 - 49287926
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  49287875 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 49287926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 2351030 - 2351084
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  2351030 ggttggcttggaatcttgaagtttgctcctccagaggtctcaggttcgattccct 2351084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 51535630 - 51535684
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  51535630 ggttgacttgggatcttggagtttgctcctccacaggtctcaggttcgattccct 51535684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 54127522 - 54127468
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  54127522 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccct 54127468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 20566366 - 20566421
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggt-ctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  20566366 ggttggcttgggatcttggagtttgctcctccagaggtgatcaggttcgattccct 20566421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 33992643 - 33992694
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  33992643 ggttggtttgggatcttggagtttgctcctccagaggtcttaggttcgattc 33992694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 34844938 - 34844887
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  34844938 ggtttgcttgagatcttggagtttgctcctccagaggtctcaggttcgattc 34844887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 13873475 - 13873421
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||| ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  13873475 ggtttgcttgggatcttggagtttgctccttcaaaggtctcaggttcgattccct 13873421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 35674921 - 35674867
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  35674921 ggttggcttgggatcttggagtttgctcttccaaaggtcacaggttcgattccct 35674867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 5609382 - 5609331
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||||||||||||||||||||||||| | ||| |||||||||||||||||    
T  5609382 ggttggcttgggatcttggagtttgctcattcagtggtctcaggttcgattc 5609331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 43719245 - 43719194
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||| ||| ||||||||||||||||||||||||||| |||||||||||||    
T  43719245 ggttggtttgagatcttggagtttgctcctccagaggtttcaggttcgattc 43719194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 55961922 - 55961883
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtct 234  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  55961922 ggttggcttgggatcttggagtttgctcctccagaggtct 55961883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 45787883 - 45787830
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||    
T  45787883 ggttggcttggaatcttgga-tttgctcctccagagatctcaggttcgattccct 45787830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 44343533 - 44343585
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||| ||| ||| |||| ||||||||||||    
T  44343533 ttggcttgggatcttggagtttgctcccccaaaggactcaagttcgattccct 44343585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 12500231 - 12500184
Alignment:
Q  202 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||    
T  12500231 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccct 12500184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 32942387 - 32942438
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||||||| ||||||||||||| ||||||||||||| | |||||||||||    
T  32942387 ggttggcttgagatcttggagtttactcctccagaggtttaaggttcgattc 32942438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 230
Target Start/End: Original strand, 34722187 - 34722222
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagag 230  Q
    ||||||||||||||||||||||||||||||||||||    
T  34722187 ggttggcttgggatcttggagtttgctcctccagag 34722222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 34835546 - 34835600
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  34835546 ggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 34835600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 36131690 - 36131636
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||| ||||||||| |||||||| | ||||||||| |||||||||||||||||||    
T  36131690 ggtttgcttgggattttggagttcgttcctccagatgtctcaggttcgattccct 36131636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 42245763 - 42245817
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| ||||||||||| ||||||||||||| | ||||||| |||||||||||||    
T  42245763 ggttgacttgggatcttagagtttgctcctctaaaggtctcgggttcgattccct 42245817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 12710196 - 12710252
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcccttt 251  Q
    |||||| ||||||||||||||| |||| |||   |||||||||||||||||||||||    
T  12710196 ggttggtttgggatcttggagtatgcttctcttaaggtctcaggttcgattcccttt 12710252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 30879354 - 30879291
Alignment:
Q  186 cccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||  ||| | ||||| ||||||||    
T  30879354 cccatttggggttggtttgggatcttgtagtttgctccttcatgggttttaggtttgattccct 30879291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 225
Target Start/End: Original strand, 39288878 - 39288913
Alignment:
Q  190 tttggggttggcttgggatcttggagtttgctcctc 225  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39288878 tttggggttggtttgggatcttggagtttgctcctc 39288913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 13584434 - 13584380
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||| || ||| |||||||||||||||||| | |||||| ||||||||||||    
T  13584434 ggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccct 13584380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 30938269 - 30938219
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctcc-agaggtctcaggttcgattc 246  Q
    |||| ||||||||||||||| |||||||||  |||||||||||||||||||    
T  30938269 ttggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattc 30938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 37980198 - 37980148
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||||||||| |||||||| ||||||||   ||||||||||||||||||    
T  37980198 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattc 37980148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 56409976 - 56410026
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||||||||| |||||||| ||||||||   ||||||||||||||||||    
T  56409976 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattc 56410026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 20527212 - 20527159
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| ||| ||| |||||||||| |||||||||||||||| ||| ||||||||    
T  20527212 gttggtttgagattttggagtttgttcctccagaggtctcaagtttgattccct 20527159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 38869794 - 38869847
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctcc-agaggtctcaggttcgattccct 249  Q
    |||||||||||||| ||||| |||||||||   |||||||||||||||||||||    
T  38869794 ttggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccct 38869847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 246
Target Start/End: Original strand, 39509097 - 39509146
Alignment:
Q  198 tggcttgggatcttggagtttgctcctcc-agaggtctcaggttcgattc 246  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||||||    
T  39509097 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattc 39509146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 45654775 - 45654824
Alignment:
Q  35 cattgtttaaggattttattaaaggaaatttggtcatgaaaatacaagtt 84  Q
    |||||||||||||||| |||||| ||||||| ||  ||||||||||||||    
T  45654775 cattgtttaaggatttcattaaaagaaattttgttttgaaaatacaagtt 45654824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 7e-27; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 43374516 - 43374451
Alignment:
Q  184 aacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43374516 aacccatttggggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccct 43374451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 36242503 - 36242438
Alignment:
Q  184 aacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  36242503 aacccatttggggttggcttgggatcttgaaatttgctcctccagaggtctcaggttcgattccct 36242438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 44946233 - 44946176
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44946233 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 44946176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 27290605 - 27290660
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27290605 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctt 27290660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 5394026 - 5394088
Alignment:
Q  187 ccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  5394026 ccatttggggttggcttgagatcttggagtttgctcctccaaaggtctcaggttcgattccct 5394088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 10582170 - 10582116
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10582170 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 10582116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 11941390 - 11941336
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11941390 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccct 11941336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 18976605 - 18976551
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18976605 ggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccct 18976551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 33827753 - 33827699
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33827753 ggttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccct 33827699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 41314009 - 41314063
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41314009 ggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 41314063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 44976334 - 44976280
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44976334 ggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccct 44976280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 1191520 - 1191584
Alignment:
Q  184 aacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  1191520 aacccatttggg-ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgtttccct 1191584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 45271390 - 45271455
Alignment:
Q  184 aacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||| ||| ||||||||||||    
T  45271390 aacccatttggggttggcttgggatcttagagtttgcttctccagaggtttcatgttcgattccct 45271455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 34516588 - 34516537
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34516588 ggttggcttgggatcttggagtttgctcctccagaggtttcaggttcgattc 34516537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 17324783 - 17324837
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  17324783 ggttggtttggtatcttggagtttgctcctccagaggtctcaggttcgattccct 17324837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 25293183 - 25293237
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25293183 ggttgacttgggatcttggagtttgctcctcgagaggtctcaggttcgattccct 25293237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 15037976 - 15038033
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15037976 ggttgactcgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttg 15038033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 6714461 - 6714409
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  6714461 ggttggcttgagatcttggagtttgctcctccagaggtctcaggtttgattcc 6714409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 4852575 - 4852629
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  4852575 ggttgacttggaatcttggagtttgctcctccaaaggtctcaggttcgattccct 4852629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 35171831 - 35171871
Alignment:
Q  209 cttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35171831 cttggagtttgctcctccagaggtctcaggttcgattccct 35171871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 8258925 - 8258968
Alignment:
Q  206 gatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  8258925 gatcttggagtttgctcctccagatgtctcaggttcgattccct 8258968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 13266499 - 13266558
Alignment:
Q  187 ccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||||||||||||||| ||||||||| |||||||||  |||||||||| |||||||||    
T  13266499 ccatttggggttggcttgagatcttggaatttgctcctttagaggtctcatgttcgattc 13266558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 8192531 - 8192477
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||| ||||||||   |||||||||||||||||||||    
T  8192531 ggttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccct 8192477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 24196021 - 24196075
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||    
T  24196021 ggttggcttgggattttggggttcgctcctccagaggtttcaggttcgattccct 24196075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 4567616 - 4567567
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||||||||    
T  4567616 gttggcttgggatcttgaagtttgctccttcagaagtctcaggttcgatt 4567567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 32845113 - 32845162
Alignment:
Q  200 gcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||    
T  32845113 gcttgggatcttggagtttgctcctccaaaagtttcaggttcgattccct 32845162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 40997530 - 40997477
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 248  Q
    ||||| ||||||||||||||||||||||||||| |||||||| |||| ||||||    
T  40997530 ggttgacttgggatcttggagtttgctcctccaaaggtctcatgttcaattccc 40997477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 44610091 - 44610140
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgat 244  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  44610091 ggttggcttgagatcttggagtttgctcttccaaaggtctcaggttcgat 44610140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 30467010 - 30466959
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||| ||||||| |||||||||| ||||| ||||||||||||||||||||    
T  30467010 ggttggtttgggatattggagtttgttcctctagaggtctcaggttcgattc 30466959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 19054044 - 19054094
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    |||||||| ||||||||||| |||||||||| |||||||||||| ||||||    
T  19054044 ttggcttgagatcttggagtctgctcctccaaaggtctcaggtttgattcc 19054094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 19606025 - 19605971
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||  |||||||   |||||||||||||||||||||    
T  19606025 ggttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgattccct 19605971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 29698153 - 29698194
Alignment:
Q  184 aacccatttggggttggcttgggatcttggagtttgctcctc 225  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  29698153 aaccaatttggggttggcttgggatcttggaatttgctcctc 29698194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 32526258 - 32526209
Alignment:
Q  202 ttgggatcttggagtttgctcctccagaggtctcaggttcgattcccttt 251  Q
    ||||||||||| ||||||||||||   |||||||||||||||||||||||    
T  32526258 ttgggatcttgaagtttgctcctctcaaggtctcaggttcgattcccttt 32526209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 38341746 - 38341807
Alignment:
Q  187 ccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 248  Q
    ||||||| ||||| |||||||||||| ||||||||||||   ||||||||| ||||||||||    
T  38341746 ccatttgaggttgacttgggatcttgaagtttgctcctctcaaggtctcagattcgattccc 38341807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 6099571 - 6099519
Alignment:
Q  194 gggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||||||||||| |||||||| ||||||||   ||||||||||||||||||    
T  6099571 gggttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattc 6099519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 19849850 - 19849902
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    |||||| ||| |||||||||||||||||||||| |||||| | ||||||||||    
T  19849850 ggttggtttgagatcttggagtttgctcctccaaaggtcttaagttcgattcc 19849902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 41329867 - 41329914
Alignment:
Q  202 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||| ||||||||||||||| |||| |||| |||||||||||    
T  41329867 ttgggatcttagagtttgctcctccaaaggtttcagattcgattccct 41329914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 225
Target Start/End: Complemental strand, 1845837 - 1845807
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctc 225  Q
    |||||||||||||||||||||||||||||||    
T  1845837 ggttggcttgggatcttggagtttgctcctc 1845807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 27269530 - 27269476
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||| ||||||||||||| | |||| | ||||| ||||||||    
T  27269530 ggttggcttgggatcttcgagtttgctcctctaaaggttttaggtttgattccct 27269476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 29361573 - 29361615
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctccagaggtctcaggt 239  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  29361573 ttggattgggatcttggagtttgctcctccaaagatctcaggt 29361615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 28194311 - 28194262
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||||||||||||||||| ||||||||   |||||| |||||||||||    
T  28194311 ttggcttgggatcttggagtgtgctcctcttaaggtcttaggttcgattc 28194262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 13747684 - 13747640
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggtt 240  Q
    |||||||||||| |||||||| |||||||||  ||||||||||||    
T  13747684 gttggcttgggaccttggagtatgctcctcccaaggtctcaggtt 13747640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 10084013 - 10083945
Alignment:
Q  181 tttaacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  10084013 tttaacccatttggggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccct 10083945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 10190936 - 10190868
Alignment:
Q  181 tttaacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  10190936 tttaacccatttggggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccct 10190868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 53424356 - 53424299
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53424356 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 53424299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 25289894 - 25289840
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25289894 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 25289840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 26108309 - 26108363
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26108309 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 26108363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 30807333 - 30807279
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30807333 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 30807279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 35492928 - 35492982
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35492928 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 35492982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 40940842 - 40940896
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40940842 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 40940896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 45529934 - 45529880
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45529934 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 45529880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 46576365 - 46576419
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46576365 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 46576419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 30257641 - 30257698
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30257641 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttg 30257698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 25379778 - 25379830
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25379778 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 25379830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 34492755 - 34492696
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttgct 254  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  34492755 ggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgct 34492696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 8456330 - 8456276
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8456330 ggttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccct 8456276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 15566679 - 15566625
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15566679 ggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccct 15566625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 21362960 - 21363014
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21362960 ggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 21363014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 26174130 - 26174180
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26174130 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 26174180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 49258442 - 49258388
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  49258442 ggttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgattccct 49258388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 52455829 - 52455775
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  52455829 ggttggctagggatcttggagtttgctcctccagaggtctcaggttcgattccct 52455775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 52821815 - 52821761
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  52821815 ggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 52821761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 53234090 - 53234039
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  53234090 ggttggcttgggatcttggagtttgctcctccagaagtctcaggttcgattc 53234039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 7485705 - 7485651
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7485705 ggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 7485651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 29915449 - 29915399
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29915449 ggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatt 29915399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 29964602 - 29964552
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29964602 ggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatt 29964552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 40133629 - 40133575
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  40133629 ggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccct 40133575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 19857069 - 19857125
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  19857069 ggttggcttgg-atcttggagtttgctcctccagatgtctcaggttcgattccctttg 19857125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 45272595 - 45272542
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  45272595 gttggcttgggatcttggagtttgctcctccagatgtctcagtttcgattccct 45272542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 48977405 - 48977457
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  48977405 ggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattcc 48977457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 7470395 - 7470341
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||    
T  7470395 ggttgacttgagatcttggagtttgctcctccaaaggtctcaggttcgattccct 7470341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 9853640 - 9853686
Alignment:
Q  202 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 248  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  9853640 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 9853686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 31538018 - 31537964
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||    
T  31538018 ggttggcttaggatcttggagtttgctcctccagaggtctcatgtttgattccct 31537964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 39042027 - 39041981
Alignment:
Q  200 gcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  39042027 gcttgggatcttggagtttgctcctccagaggtctcaagttcgattc 39041981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 25344237 - 25344180
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||| |||||||||||    
T  25344237 ggttgacttgggatcttcgagtttgctcctccagagatctcaggtttgattccctttg 25344180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 1692863 - 1692903
Alignment:
Q  207 atcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1692863 atcttggagtttgctcctccagaggtctcaggttcgattcc 1692903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 18177067 - 18177013
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||    
T  18177067 ggttgacttgagatcttggagtttgctcttccagaggtatcaggttcgattccct 18177013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 55287820 - 55287874
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||||    
T  55287820 ggttggcttggaatcttagagtttgctccttcagaggtttcaggttcgattccct 55287874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 38732983 - 38733034
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  38732983 ggttgacttggaatcttggagtttgttcctccagaggtctcaggtccgattc 38733034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 49167073 - 49167124
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||||||| |||||||||||||||||||||| || | |||||||||||||    
T  49167073 ggttggcttgagatcttggagtttgctcctccaaagatatcaggttcgattc 49167124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 14343468 - 14343418
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||| ||| |||||||||||||||||||||||| ||||||| |||||||    
T  14343468 ggttggtttgagatcttggagtttgctcctccagatgtctcagattcgatt 14343418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 53288892 - 53288838
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||| ||||||| || ||||||||||||||| |||||||||| ||||||||||    
T  53288892 ggttggtttgggatattagagtttgctcctccaaaggtctcaggctcgattccct 53288838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 8958227 - 8958166
Alignment:
Q  184 aacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||||||||| ||| |||||||||||||||| ||||||| || |||||| | ||||||||    
T  8958227 aacccatttgggattgacttgggatcttggagtctgctccttcaaaggtcttatgttcgatt 8958166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 9842938 - 9842990
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 248  Q
    |||||| ||||||||||||||||| |||||||||||||||| | ||||||||||    
T  9842938 ggttggtttgggatcttggagttttctcctccagaggtctc-gattcgattccc 9842990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 25017534 - 25017584
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    |||||||||| ||||||||||||||||||||| || ||| ||||||||||||    
T  25017534 gttggcttgg-atcttggagtttgctcctccaaagatcttaggttcgattcc 25017584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 32151441 - 32151492
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    ||||| ||||||||||||||||||||||||||| |||| |||  ||||||||    
T  32151441 ggttgacttgggatcttggagtttgctcctccaaaggtttcaaattcgattc 32151492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 4462650 - 4462704
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||| |||||||||||||||| || || | |||||| ||||||||||||    
T  4462650 ggttggcttgagatcttggagtttgctacttcaaaagtctcatgttcgattccct 4462704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 47454667 - 47454617
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctcc-agaggtctcaggttcgattc 246  Q
    |||||||| ||||||||||| |||||||||  |||||||||||||||||||    
T  47454667 ttggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattc 47454617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 50583009 - 50583059
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||| ||||||||||||||||||||||||   |||| ||||||||||||    
T  50583009 ggttggtttgggatcttggagtttgctcctcttaaggtttcaggttcgatt 50583059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 34844396 - 34844449
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||| || |||||||| ||||||||   |||||||||||||||||||||    
T  34844396 gttggcttgagaccttggagtgtgctcctctcaaggtctcaggttcgattccct 34844449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 26158836 - 26158892
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    ||||||||| ||||||||||| ||||||||   ||||||||||||  ||||||||||    
T  26158836 gttggcttgagatcttggagtgtgctcctctcaaggtctcaggtttcattccctttg 26158892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 245
Target Start/End: Complemental strand, 44743904 - 44743856
Alignment:
Q  198 tggcttgggatcttggagtttgctcctcc-agaggtctcaggttcgatt 245  Q
    ||||||||||||| ||||| |||||||||  ||||||||||||||||||    
T  44743904 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgatt 44743856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 1236 - 1182
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1236 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 1182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 9479 - 9425
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9479 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 9425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 12180 - 12130
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12180 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 12130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 2103076 - 2103130
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2103076 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 2103130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 7176042 - 7175988
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7176042 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 7175988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 7275298 - 7275352
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7275298 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 7275352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 7800012 - 7799958
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7800012 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 7799958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 10091209 - 10091263
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10091209 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 10091263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 21218013 - 21217959
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21218013 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 21217959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 22119909 - 22119963
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22119909 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 22119963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 22703507 - 22703561
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703507 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 22703561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 40543090 - 40543036
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40543090 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 40543036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 23854417 - 23854468
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23854417 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 23854468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 2751292 - 2751346
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2751292 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 2751346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 11997870 - 11997924
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11997870 ggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccct 11997924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 18044128 - 18044182
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18044128 ggttggcttgggatcttggagtttgctcctccagaggtcccaggttcgattccct 18044182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 21835172 - 21835226
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21835172 ggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccct 21835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 22299870 - 22299924
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22299870 ggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccct 22299924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 17212074 - 17212125
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17212074 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattc 17212125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 13332603 - 13332549
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  13332603 ggttggcttgggatcttggagtttgctcctcctgaggtctcaggtacgattccct 13332549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 19421252 - 19421302
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19421252 ggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatt 19421302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 25333440 - 25333494
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  25333440 ggttggcttgggatcttggagtttgcttctccagaggtctcaggttcgataccct 25333494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 27312173 - 27312227
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  27312173 ggttggcttgggatcttggagtttgctcctctagaggtttcaggttcgattccct 27312227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 42913693 - 42913643
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42913693 ggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatt 42913643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 23012688 - 23012634
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  23012688 ggttggcttgggatcttggagtttgcttctccagaggtcttaggtttgattccct 23012634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 27009380 - 27009434
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  27009380 ggttggcttcggatcttggagtttgctcatccagaggtctcaggttcgatcccct 27009434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 28089837 - 28089891
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||| ||||    
T  28089837 ggttggcttgagatcttggagtttgctcctccagatgtctcaggttcgataccct 28089891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 32849612 - 32849666
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  32849612 ggttgacttgggatcttggagtttgctcctccagaggtctcgggtttgattccct 32849666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 27704023 - 27704080
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttg 252  Q
    |||||||||| ||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  27704023 ggttggcttgagatcttgaagtttgctcctacagaggtctcaggttcgatttcctttg 27704080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 31273936 - 31273989
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||| |||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  31273936 gttgacttgggatcttggagtttgctcctccagagctctcaagttcgattccct 31273989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 2344320 - 2344372
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||    
T  2344320 ggttggcttgggatcttggagtttgctcctccaaagctctcagattcgattcc 2344372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 14199839 - 14199792
Alignment:
Q  202 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||    
T  14199839 ttggaatcttggagtttcctcctccagaggtctcaggttcgattccct 14199792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 31197612 - 31197663
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| |||||    
T  31197612 ggttggcttgggatcttggagtttgctcatccagatgtctcaggtttgattc 31197663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 17197130 - 17197076
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||| ||| |||||||||||||||||||||| |||||||| ||||||||||||    
T  17197130 ggttggtttgcgatcttggagtttgctcctccataggtctcaagttcgattccct 17197076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 21370618 - 21370672
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||| ||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  21370618 ggttggtttgggatcttggagtttactccttcagatgtctcaggttcgattccct 21370672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 39145832 - 39145778
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| ||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  39145832 ggttgacttgggatcttggagtttgctcctccagatgtcttcggttcgattccct 39145778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 42814885 - 42814939
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| |||||||||||||||||||||||||  || |||||||||||||||||||    
T  42814885 ggttgacttgggatcttggagtttgctcctcttgaagtctcaggttcgattccct 42814939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 28003857 - 28003902
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggtt 240  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||    
T  28003857 ggttggcttgggatcttggagtttgctcctccagaagtcttaggtt 28003902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 43785479 - 43785426
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 248  Q
    ||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||    
T  43785479 ggttggcttgggatctttgagattgctcctccaaaggtctcaagttcgattccc 43785426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 238
Target Start/End: Complemental strand, 31713075 - 31713032
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcagg 238  Q
    |||||| |||||||||||||||||||||||| ||||||||||||    
T  31713075 ggttggtttgggatcttggagtttgctcctcgagaggtctcagg 31713032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 40332120 - 40332170
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||||||||  ||||||||||||||||||| | |||||||||||||||||    
T  40332120 ggttggcttgaaatcttggagtttgctcctctaaaggtctcaggttcgatt 40332170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 249
Target Start/End: Original strand, 16374034 - 16374069
Alignment:
Q  214 agtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||| |||||||||||    
T  16374034 agtttgctcctccagaggtctcagattcgattccct 16374069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 22264683 - 22264628
Alignment:
Q  194 gggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||| |||| |||||||||||||||||||   ||||||||| |||||||||||    
T  22264683 gggttggtttggaatcttggagtttgctcctctcaaggtctcagattcgattccct 22264628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 28950889 - 28950946
Alignment:
Q  195 ggttggcttgggatcttggagt---ttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||| |||||||||   |||||||| |||||||||||||||||| |||||    
T  28950889 ggttggcttggggtcttggagtagtttgctccttcagaggtctcaggttcgactccct 28950946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 245
Target Start/End: Complemental strand, 36772471 - 36772432
Alignment:
Q  206 gatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  36772471 gatcttggagtttgctcctctagaggtctcaggtttgatt 36772432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 37473639 - 37473690
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctcc-agaggtctcaggttcgattc 246  Q
    ||||| ||||||||| |||||||||||||||  |||||||||||||||||||    
T  37473639 gttggtttgggatctaggagtttgctcctccttgaggtctcaggttcgattc 37473690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 9718167 - 9718113
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||| || ||| |||||||||||||||||| | |||||| ||||||||||||    
T  9718167 ggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccct 9718113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 22638313 - 22638367
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| |||| |||||| |||||||||| | || |||||||||||||||||||||    
T  22638313 ggttgacttgagatcttagagtttgctctttcaaaggtctcaggttcgattccct 22638367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 654863 - 654830
Alignment:
Q  216 tttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||| |||||||||||||||||||||    
T  654863 tttgctcctccaaaggtctcaggttcgattccct 654830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 15905723 - 15905674
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    ||||||||||| || ||||| |||||||||  ||||||||||||||||||    
T  15905723 ttggcttgggacctgggagtgtgctcctccttaggtctcaggttcgattc 15905674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 48125225 - 48125180
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttc 241  Q
    |||||||||||| |||||||| |||||||||  |||||||||||||    
T  48125225 gttggcttgggaccttggagtgtgctcctccgaaggtctcaggttc 48125180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 48771964 - 48772013
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctcc-agaggtctcaggttcgatt 245  Q
    |||||||||||||| ||||| |||||||||  ||||||||||||||||||    
T  48771964 ttggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgatt 48772013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 28646996 - 28647044
Alignment:
Q  201 cttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||| |||| |||   |||||||||||||||||||||    
T  28646996 cttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccct 28647044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 9238992 - 9239046
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9238992 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 9239046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 11448888 - 11448939
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11448888 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 11448939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 28968230 - 28968171
Alignment:
Q  187 ccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  28968230 ccatttggggttggcttgggatcttggagtttgctcctctagaggtctcagattcgattc 28968171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 12591654 - 12591708
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12591654 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 12591708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 14212909 - 14212963
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14212909 ggttggctcgggatcttggagtttgctcctccagaggtctcaggttcgattccct 14212963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 15360278 - 15360224
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15360278 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 15360224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 22576084 - 22576138
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22576084 ggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccct 22576138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 654320 - 654272
Alignment:
Q  201 cttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  654320 cttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 654272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 17706499 - 17706435
Alignment:
Q  183 taacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  17706499 taacccatttgtggttgacttgggatcttggagtttgctcctccagaagtctcaagttcgattcc 17706435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 11007182 - 11007233
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11007182 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 11007233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 5360251 - 5360197
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  5360251 ggttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgattccct 5360197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 34147363 - 34147417
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  34147363 ggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccct 34147417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 34159979 - 34160033
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  34159979 ggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccct 34160033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 21982500 - 21982447
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 248  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  21982500 ggttggcttgggatcttgaagtttgctcctccagaggtctgaggttcgattccc 21982447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 9843955 - 9844003
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcga 243  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9843955 ggttggcttgggatcttggagtttgctcctctagaggtctcaggttcga 9844003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 13753257 - 13753308
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  13753257 ggttggctttggatcttggagtttgctcctccagaggtctcaggttcaattc 13753308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 1344960 - 1345006
Alignment:
Q  203 tgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  1344960 tgggatcttggagtttgttcctccagaggtctcaggttcgattccct 1345006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 3222814 - 3222761
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  3222814 ggttggcttgggatcttgcagtttgctcct-cagaggtctcaggttcgattccct 3222761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 11840918 - 11840972
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||| || || ||||||||||||||||||||||| ||||||||||    
T  11840918 ggttggcttgggatattagaatttgctcctccagaggtctcaggctcgattccct 11840972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 17081234 - 17081180
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||    
T  17081234 ggttggcttaggatcttggagtttgctcctccagatgtctcaagtttgattccct 17081180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 21148690 - 21148636
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||  | ||||||||||| ||||||||||||    
T  21148690 ggttggcttgggatcttggagtttgctttttcagaggtctcaagttcgattccct 21148636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 28672084 - 28672138
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| |||| |||||||||||||||||||| |||||||| ||||||||||||||    
T  28672084 ggttgacttgagatcttggagtttgctcctctagaggtcttaggttcgattccct 28672138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 9208269 - 9208322
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 248  Q
    |||||| ||||||||||||||||||||||||   ||||||||||||||||||||    
T  9208269 ggttggattgggatcttggagtttgctcctctcaaggtctcaggttcgattccc 9208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 33499491 - 33499546
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttc-gattccct 249  Q
    |||||||||||||||||||||||||||||||   ||||||||||||| ||||||||    
T  33499491 ggttggcttgggatcttggagtttgctcctctcaaggtctcaggttcagattccct 33499546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 33718638 - 33718587
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||| ||||||||||||||||| || |||||||| |||||||||||||||    
T  33718638 ggttggtttgggatcttggagtttacttctccagagatctcaggttcgattc 33718587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 17149636 - 17149582
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||| ||||||||||||||| ||||||||   |||||||||||||||||||||    
T  17149636 ggttggtttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccct 17149582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 249
Target Start/End: Original strand, 12390465 - 12390496
Alignment:
Q  218 tgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||    
T  12390465 tgctcctccagaggtctcaggttcgattccct 12390496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 9690818 - 9690768
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||| ||| ||| ||||||||||||| ||||||||||| ||||||||||    
T  9690818 ggttggtttgagattttggagtttgctcttccagaggtcttaggttcgatt 9690768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 28742022 - 28741970
Alignment:
Q  194 gggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 246  Q
    |||||| | |||||||||||||| ||||||||   ||||||||||||||||||    
T  28742022 gggttgacctgggatcttggagtgtgctcctctcaaggtctcaggttcgattc 28741970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 161828 - 161880
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  161828 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 161880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 5262 - 5208
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5262 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 5208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 10873 - 10823
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10873 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 10823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 8587 - 8537
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8587 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 8537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 41824 - 41770
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41824 ggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 41770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 7488 - 7435
Alignment:
Q  196 gttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7488 gttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccct 7435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 138 - 84
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  138 ggttggcttgtgatcttggagtttgctcgtccagaggtctcaggttcgattccct 84  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 8359 - 8305
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  8359 ggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccct 8305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 15008 - 15062
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  15008 ggttggcctgggatcttggagtttgctcctccagaggtctcaggttcaattccct 15062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 40342 - 40396
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  40342 ggttggcttaggatcttggagtttgctccttcagaggtctcaggttcgattccct 40396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 53051 - 52997
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  53051 ggttggcttgggatcttggagtttgctcctccagaggcttcaggttcgattccct 52997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 97546 - 97492
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  97546 ggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccct 97492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 66779 - 66831
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 247  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  66779 ggttggcttgggatcttggagtttgctcctccaaaggtctcacgttcgattcc 66831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 12934 - 12884
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 245  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||||||||||    
T  12934 ggttgacttgggatcttggagttcgctcctccagagatctcaggttcgatt 12884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 20246 - 20293
Alignment:
Q  202 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||    
T  20246 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccct 20293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 11554 - 11604
Alignment:
Q  197 ttggcttgggatcttggagtttgctcctcc-agaggtctcaggttcgattc 246  Q
    |||||||||||||| ||||| |||||||||  |||||||||||||||||||    
T  11554 ttggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattc 11604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 27793 - 27847
Alignment:
Q  195 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||| ||||||| ||||||||||||||||   ||||||| |||||||||||||    
T  27793 ggttggtttgggattttggagtttgctcctctcaaggtctcgggttcgattccct 27847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 39131 - 39163
Alignment:
Q  217 ttgctcctccagaggtctcaggttcgattccct 249  Q
    |||||||||||||||||||| ||||||||||||    
T  39131 ttgctcctccagaggtctcaagttcgattccct 39163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University