View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20125_low_26 (Length: 249)
Name: NF20125_low_26
Description: NF20125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20125_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 16 - 231
Target Start/End: Complemental strand, 2051284 - 2051071
Alignment:
| Q |
16 |
atataaagttccaattcaaataagagcaataatatattagtagagattgtaatgagcttataaatagtgacaaaagtagtattaatatgtggatgtttgg |
115 |
Q |
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| T |
2051284 |
atataaagttccaattcaaataagagcaataatatattagtaga--ttgtaatgagcttataaatagtgacaaaagtagtattaatatgtggatgtttgg |
2051187 |
T |
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| Q |
116 |
aattgcaggaagcttttgcttcggatgtaaagatgaaggcaacattacgagatccagacacagatgcatggaaaacactttgtctcacatttcttaaagg |
215 |
Q |
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| T |
2051186 |
aattgcaggaagcttttgcttcggatgtaaagatgaaggcaacattacgagatccagacacagatgcatggaaaacactttgtctcacatttcttaaagg |
2051087 |
T |
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| Q |
216 |
tcaattatgacctagt |
231 |
Q |
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|||||||||||||||| |
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| T |
2051086 |
tcaattatgacctagt |
2051071 |
T |
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