View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20125_low_3 (Length: 618)

Name: NF20125_low_3
Description: NF20125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20125_low_3
NF20125_low_3
[»] chr6 (59 HSPs)
chr6 (76-579)||(2286769-2287289)
chr6 (74-410)||(19471335-19471669)
chr6 (74-410)||(25396895-25397228)
chr6 (432-559)||(1650518-1650645)
chr6 (432-559)||(14626543-14626670)
chr6 (345-435)||(10986448-10986538)
chr6 (341-435)||(25598339-25598433)
chr6 (345-435)||(4477555-4477645)
chr6 (345-435)||(23838896-23838986)
chr6 (71-191)||(24512841-24512959)
chr6 (76-177)||(25598596-25598697)
chr6 (35-105)||(1639979-1640049)
chr6 (333-410)||(9187217-9187294)
chr6 (37-101)||(16132388-16132452)
chr6 (52-105)||(1254852-1254905)
chr6 (333-410)||(24513100-24513177)
chr6 (37-94)||(31021685-31021741)
chr6 (37-140)||(19443000-19443104)
chr6 (60-105)||(1588763-1588808)
chr6 (37-94)||(13765378-13765434)
chr6 (37-94)||(23225822-23225878)
chr6 (48-104)||(1589755-1589811)
chr6 (56-105)||(34296175-34296224)
chr6 (52-92)||(9621528-9621568)
chr6 (399-435)||(14626496-14626532)
chr6 (325-409)||(31252146-31252230)
chr6 (72-130)||(34639985-34640043)
chr6 (72-130)||(34646659-34646717)
chr6 (73-123)||(15816660-15816712)
chr6 (52-89)||(16884590-16884627)
chr6 (37-94)||(21119769-21119826)
chr6 (73-130)||(29614146-29614203)
chr6 (399-435)||(1658125-1658161)
chr6 (74-130)||(4477856-4477912)
chr6 (74-130)||(23839197-23839253)
chr6 (37-85)||(23956903-23956950)
chr6 (52-92)||(25739355-25739395)
chr6 (72-128)||(31252423-31252479)
chr6 (399-435)||(35009818-35009854)
chr6 (399-430)||(1650471-1650502)
chr6 (432-507)||(31628057-31628131)
chr6 (46-104)||(9184970-9185028)
chr6 (329-391)||(11288922-11288984)
chr6 (72-126)||(15458492-15458546)
chr6 (72-126)||(15465087-15465141)
chr6 (73-130)||(930095-930152)
chr6 (73-130)||(18800436-18800493)
chr6 (74-131)||(25348485-25348542)
chr6 (38-101)||(5109678-5109742)
chr6 (74-126)||(9187498-9187550)
chr6 (73-125)||(12168366-12168418)
chr6 (399-435)||(14152153-14152189)
chr6 (73-125)||(19287275-19287327)
chr6 (73-125)||(19785869-19785921)
chr6 (73-125)||(19878459-19878511)
chr6 (41-101)||(23620194-23620253)
chr6 (72-104)||(28288508-28288540)
chr6 (439-507)||(33324465-33324532)
chr6 (439-507)||(35136419-35136486)
[»] chr3 (53 HSPs)
chr3 (76-559)||(16800584-16801081)
chr3 (432-559)||(15614545-15614672)
chr3 (331-435)||(20248034-20248139)
chr3 (331-435)||(38311053-38311158)
chr3 (343-435)||(14763024-14763116)
chr3 (345-435)||(9534026-9534116)
chr3 (345-435)||(23370773-23370863)
chr3 (333-435)||(51301291-51301392)
chr3 (466-559)||(15575526-15575619)
chr3 (52-123)||(2247628-2247701)
chr3 (37-101)||(52212396-52212459)
chr3 (340-411)||(13302502-13302573)
chr3 (340-411)||(13324050-13324121)
chr3 (37-94)||(42559-42615)
chr3 (52-105)||(13837159-13837212)
chr3 (37-94)||(16324505-16324561)
chr3 (333-410)||(17240768-17240845)
chr3 (37-101)||(23392782-23392847)
chr3 (52-105)||(51602503-51602556)
chr3 (54-105)||(11913816-11913867)
chr3 (340-411)||(13313158-13313229)
chr3 (37-104)||(55291567-55291634)
chr3 (333-410)||(18928965-18929042)
chr3 (37-139)||(178444-178548)
chr3 (74-153)||(17240513-17240591)
chr3 (52-99)||(17513854-17513901)
chr3 (52-94)||(13437270-13437312)
chr3 (37-94)||(10551354-10551411)
chr3 (49-102)||(11325023-11325076)
chr3 (52-105)||(30123352-30123405)
chr3 (37-101)||(13025534-13025598)
chr3 (55-104)||(15239079-15239128)
chr3 (37-94)||(17547435-17547492)
chr3 (74-131)||(18929243-18929300)
chr3 (74-130)||(9534326-9534382)
chr3 (37-101)||(13029126-13029190)
chr3 (52-92)||(16828259-16828299)
chr3 (399-430)||(15614688-15614719)
chr3 (340-410)||(16801728-16801799)
chr3 (76-130)||(20247791-20247845)
chr3 (72-130)||(23370504-23370562)
chr3 (76-130)||(24192955-24193009)
chr3 (73-130)||(16801467-16801523)
chr3 (482-515)||(22144722-22144755)
chr3 (72-125)||(24933827-24933880)
chr3 (74-130)||(14762758-14762814)
chr3 (37-101)||(30205576-30205639)
chr3 (73-125)||(41455097-41455149)
chr3 (399-435)||(47984499-47984535)
chr3 (399-435)||(47993786-47993822)
chr3 (399-435)||(48003073-48003109)
chr3 (399-435)||(48012359-48012395)
chr3 (439-507)||(55441257-55441324)
[»] scaffold0124 (4 HSPs)
scaffold0124 (34-435)||(35399-35800)
scaffold0124 (325-407)||(34525-34607)
scaffold0124 (74-175)||(34276-34377)
scaffold0124 (437-515)||(35816-35894)
[»] chr4 (46 HSPs)
chr4 (34-427)||(14911784-14912177)
chr4 (74-410)||(8834617-8834951)
chr4 (74-410)||(15307842-15308176)
chr4 (74-410)||(15244937-15245271)
chr4 (74-408)||(13888366-13888697)
chr4 (74-435)||(18213463-18213823)
chr4 (70-175)||(15408093-15408198)
chr4 (37-123)||(14035744-14035831)
chr4 (37-104)||(16370686-16370753)
chr4 (37-105)||(21188927-21188994)
chr4 (295-410)||(14486382-14486496)
chr4 (37-104)||(15415844-15415911)
chr4 (37-94)||(15712659-15712715)
chr4 (37-105)||(18230760-18230829)
chr4 (37-94)||(28386275-28386331)
chr4 (295-408)||(13887509-13887621)
chr4 (325-410)||(15407860-15407945)
chr4 (35-123)||(14049605-14049696)
chr4 (37-140)||(15991248-15991353)
chr4 (37-101)||(20898714-20898778)
chr4 (49-105)||(56114737-56114793)
chr4 (52-101)||(15447354-15447403)
chr4 (37-88)||(12729809-12729860)
chr4 (39-105)||(16277246-16277312)
chr4 (331-410)||(11847828-11847909)
chr4 (49-102)||(33661568-33661621)
chr4 (37-101)||(13878804-13878867)
chr4 (37-101)||(13882409-13882472)
chr4 (37-101)||(15076384-15076448)
chr4 (52-92)||(15239794-15239834)
chr4 (325-409)||(27905988-27906072)
chr4 (35-123)||(30147942-30148033)
chr4 (437-515)||(14911682-14911760)
chr4 (43-105)||(4171907-4171969)
chr4 (43-105)||(31116226-31116288)
chr4 (55-101)||(32490766-32490812)
chr4 (73-130)||(11848112-11848169)
chr4 (73-119)||(15747556-15747604)
chr4 (37-101)||(9333501-9333564)
chr4 (37-101)||(9387284-9387347)
chr4 (76-128)||(14486661-14486713)
chr4 (49-101)||(15069784-15069836)
chr4 (74-119)||(17143243-17143290)
chr4 (440-508)||(23270343-23270411)
chr4 (50-105)||(38979930-38979986)
chr4 (432-508)||(40885960-40886035)
[»] scaffold0012 (1 HSPs)
scaffold0012 (49-559)||(222180-222707)
[»] chr7 (58 HSPs)
chr7 (74-410)||(46625682-46626017)
chr7 (72-435)||(14566899-14567260)
chr7 (73-435)||(148315-148675)
chr7 (432-559)||(16479376-16479503)
chr7 (331-435)||(15167872-15167977)
chr7 (331-435)||(18873057-18873162)
chr7 (331-435)||(10896044-10896149)
chr7 (345-435)||(14422682-14422772)
chr7 (345-435)||(16009275-16009365)
chr7 (306-411)||(13664652-13664757)
chr7 (306-410)||(13679216-13679320)
chr7 (71-175)||(21230957-21231060)
chr7 (37-104)||(7530152-7530219)
chr7 (37-101)||(48744553-48744617)
chr7 (37-105)||(13256712-13256781)
chr7 (37-102)||(16574266-16574330)
chr7 (37-102)||(16591332-16591396)
chr7 (74-150)||(11382871-11382947)
chr7 (37-101)||(13898495-13898559)
chr7 (37-105)||(15214573-15214641)
chr7 (37-92)||(41285064-41285118)
chr7 (37-140)||(23556330-23556433)
chr7 (37-140)||(23557519-23557622)
chr7 (60-105)||(15727353-15727398)
chr7 (37-101)||(8249213-8249277)
chr7 (74-150)||(11389348-11389424)
chr7 (48-104)||(15726350-15726406)
chr7 (71-150)||(20311049-20311128)
chr7 (38-105)||(42042186-42042252)
chr7 (53-95)||(16250201-16250243)
chr7 (333-402)||(16677024-16677093)
chr7 (333-402)||(17651260-17651329)
chr7 (333-410)||(21231216-21231293)
chr7 (325-409)||(14230504-14230588)
chr7 (37-104)||(39994818-39994886)
chr7 (432-515)||(47481456-47481539)
chr7 (39-94)||(14188260-14188314)
chr7 (39-94)||(14190858-14190912)
chr7 (52-99)||(29005095-29005142)
chr7 (72-123)||(37726839-37726892)
chr7 (55-104)||(12207673-12207722)
chr7 (73-130)||(14422983-14423040)
chr7 (73-123)||(34958562-34958614)
chr7 (73-138)||(831633-831699)
chr7 (73-138)||(1196813-1196879)
chr7 (74-130)||(16009575-16009631)
chr7 (35-94)||(16107819-16107879)
chr7 (55-102)||(12201068-12201115)
chr7 (432-515)||(13320770-13320852)
chr7 (72-126)||(31155396-31155450)
chr7 (74-131)||(13679491-13679548)
chr7 (43-95)||(8777243-8777295)
chr7 (73-125)||(12590643-12590695)
chr7 (73-125)||(13007435-13007487)
chr7 (52-92)||(13893480-13893520)
chr7 (72-128)||(14319628-14319684)
chr7 (325-409)||(14319878-14319962)
chr7 (74-130)||(15168174-15168230)
[»] chr2 (34 HSPs)
chr2 (74-410)||(24661298-24661632)
chr2 (73-435)||(6260171-6260533)
chr2 (74-435)||(9242657-9243016)
chr2 (345-435)||(19661720-19661810)
chr2 (345-435)||(6483416-6483506)
chr2 (345-435)||(6486883-6486973)
chr2 (432-511)||(7508270-7508349)
chr2 (37-105)||(10039024-10039092)
chr2 (323-410)||(23063407-23063494)
chr2 (37-104)||(24161299-24161366)
chr2 (35-101)||(24272995-24273061)
chr2 (37-101)||(21245705-21245769)
chr2 (52-103)||(23375940-23375991)
chr2 (37-92)||(37380539-37380593)
chr2 (35-123)||(19802354-19802445)
chr2 (74-153)||(23265119-23265197)
chr2 (74-153)||(23280187-23280265)
chr2 (37-94)||(6477200-6477257)
chr2 (432-515)||(25265815-25265899)
chr2 (37-104)||(25652244-25652312)
chr2 (37-101)||(26904425-26904489)
chr2 (74-131)||(21908357-21908414)
chr2 (52-105)||(23086421-23086474)
chr2 (74-130)||(6483716-6483772)
chr2 (74-130)||(6487183-6487239)
chr2 (399-435)||(7508223-7508259)
chr2 (331-410)||(26583551-26583630)
chr2 (440-515)||(36982875-36982949)
chr2 (333-410)||(21908079-21908156)
chr2 (38-105)||(23338358-23338424)
chr2 (37-101)||(22110559-22110622)
chr2 (399-435)||(25265768-25265804)
chr2 (73-125)||(26583830-26583882)
chr2 (72-128)||(27207718-27207774)
[»] scaffold0138 (3 HSPs)
scaffold0138 (74-345)||(12082-12352)
scaffold0138 (348-410)||(1539-1601)
scaffold0138 (439-504)||(22824-22888)
[»] chr8 (53 HSPs)
chr8 (38-419)||(21931411-21931788)
chr8 (165-419)||(21840115-21840366)
chr8 (74-420)||(19750263-19750605)
chr8 (432-559)||(6774671-6774798)
chr8 (331-435)||(8727986-8728091)
chr8 (345-435)||(44477321-44477411)
chr8 (345-435)||(44492479-44492569)
chr8 (432-559)||(24548705-24548820)
chr8 (71-175)||(14056561-14056664)
chr8 (71-175)||(25111931-25112034)
chr8 (325-410)||(14056811-14056896)
chr8 (325-410)||(25111699-25111784)
chr8 (35-123)||(21860494-21860585)
chr8 (340-411)||(29643649-29643720)
chr8 (37-94)||(8413713-8413769)
chr8 (37-94)||(11775745-11775801)
chr8 (37-94)||(18023441-18023497)
chr8 (306-410)||(18613995-18614099)
chr8 (37-101)||(20387509-20387572)
chr8 (37-105)||(22433579-22433646)
chr8 (53-105)||(42559434-42559486)
chr8 (48-123)||(15635069-15635146)
chr8 (39-105)||(20494315-20494381)
chr8 (37-104)||(22617655-22617722)
chr8 (74-153)||(23482053-23482131)
chr8 (37-94)||(19882979-19883035)
chr8 (399-435)||(6774624-6774660)
chr8 (35-99)||(22815558-22815622)
chr8 (52-92)||(34951458-34951498)
chr8 (74-152)||(18614250-18614327)
chr8 (37-95)||(25657478-25657535)
chr8 (72-130)||(44477621-44477679)
chr8 (72-130)||(44492779-44492837)
chr8 (73-175)||(27940851-27940953)
chr8 (37-101)||(15003066-15003129)
chr8 (399-435)||(17345419-17345455)
chr8 (52-92)||(22005055-22005095)
chr8 (38-101)||(24980136-24980200)
chr8 (37-81)||(36601395-36601438)
chr8 (74-123)||(38184696-38184747)
chr8 (52-92)||(44522157-44522197)
chr8 (399-430)||(24548836-24548867)
chr8 (43-105)||(9404867-9404929)
chr8 (52-86)||(11250761-11250795)
chr8 (76-105)||(364884-364913)
chr8 (71-104)||(21325764-21325797)
chr8 (38-105)||(28854836-28854902)
chr8 (74-131)||(39364918-39364975)
chr8 (52-92)||(21330858-21330898)
chr8 (52-92)||(21966679-21966719)
chr8 (52-92)||(21979445-21979485)
chr8 (52-92)||(21999416-21999456)
chr8 (43-95)||(45134078-45134130)
[»] scaffold0004 (3 HSPs)
scaffold0004 (184-410)||(128766-128991)
scaffold0004 (74-153)||(116873-116951)
scaffold0004 (37-101)||(60448-60511)
[»] scaffold0031 (2 HSPs)
scaffold0031 (74-410)||(132501-132834)
scaffold0031 (74-419)||(121615-121958)
[»] scaffold0169 (1 HSPs)
scaffold0169 (50-419)||(6685-7055)
[»] scaffold0335 (2 HSPs)
scaffold0335 (38-419)||(2592-2969)
scaffold0335 (35-123)||(1791-1882)
[»] scaffold0600 (1 HSPs)
scaffold0600 (38-419)||(447-824)
[»] scaffold0232 (1 HSPs)
scaffold0232 (223-410)||(18578-18764)
[»] scaffold0037 (1 HSPs)
scaffold0037 (74-435)||(71343-71703)
[»] chr1 (29 HSPs)
chr1 (74-435)||(16372648-16373009)
chr1 (432-559)||(41393932-41394059)
chr1 (333-435)||(32651269-32651371)
chr1 (74-410)||(11157814-11158148)
chr1 (345-435)||(20437291-20437381)
chr1 (432-552)||(45051172-45051280)
chr1 (74-156)||(20805294-20805376)
chr1 (37-105)||(21180244-21180311)
chr1 (34-101)||(18271345-18271412)
chr1 (34-101)||(18275999-18276066)
chr1 (74-175)||(19663517-19663618)
chr1 (333-410)||(18712521-18712598)
chr1 (35-123)||(13227890-13227981)
chr1 (37-101)||(20902157-20902221)
chr1 (37-92)||(634968-635022)
chr1 (52-99)||(7791537-7791584)
chr1 (37-102)||(8686049-8686114)
chr1 (49-102)||(28203731-28203784)
chr1 (74-154)||(18712775-18712854)
chr1 (49-101)||(21660394-21660446)
chr1 (37-104)||(21526747-21526814)
chr1 (74-153)||(32651549-32651627)
chr1 (37-94)||(13527678-13527735)
chr1 (74-130)||(20437024-20437080)
chr1 (399-430)||(45051296-45051327)
chr1 (38-105)||(297383-297449)
chr1 (49-101)||(24476353-24476405)
chr1 (73-125)||(41112038-41112090)
chr1 (399-435)||(41394070-41394106)
[»] chr5 (36 HSPs)
chr5 (73-435)||(42961263-42961622)
chr5 (74-435)||(22337217-22337578)
chr5 (74-435)||(22340755-22341116)
chr5 (340-554)||(23111463-23111679)
chr5 (345-435)||(28370321-28370411)
chr5 (331-435)||(22750838-22750943)
chr5 (345-435)||(38144803-38144893)
chr5 (345-435)||(19512084-19512174)
chr5 (432-559)||(29190688-29190803)
chr5 (71-150)||(22438745-22438824)
chr5 (38-123)||(17813483-17813571)
chr5 (37-94)||(33472528-33472584)
chr5 (52-105)||(36461064-36461117)
chr5 (74-153)||(18407944-18408022)
chr5 (333-402)||(18408200-18408269)
chr5 (52-105)||(21980045-21980098)
chr5 (52-101)||(22356882-22356931)
chr5 (74-153)||(23111200-23111278)
chr5 (39-101)||(21663109-21663170)
chr5 (37-102)||(26707396-26707462)
chr5 (37-102)||(26977130-26977196)
chr5 (37-102)||(21553354-21553418)
chr5 (38-105)||(24276462-24276530)
chr5 (38-105)||(24385683-24385751)
chr5 (73-130)||(38144536-38144593)
chr5 (37-104)||(7786200-7786268)
chr5 (74-130)||(19512385-19512441)
chr5 (74-130)||(28370055-28370111)
chr5 (74-105)||(6766779-6766810)
chr5 (549-579)||(23111685-23111715)
chr5 (43-105)||(43122047-43122109)
chr5 (43-105)||(43125580-43125642)
chr5 (432-508)||(34939040-34939116)
chr5 (38-101)||(17021877-17021941)
chr5 (73-125)||(23528634-23528686)
chr5 (399-427)||(29190641-29190669)
[»] scaffold0019 (3 HSPs)
scaffold0019 (74-435)||(34135-34495)
scaffold0019 (71-175)||(135427-135531)
scaffold0019 (325-377)||(135227-135279)
[»] scaffold0053 (1 HSPs)
scaffold0053 (109-410)||(81246-81547)
[»] scaffold0094 (1 HSPs)
scaffold0094 (74-410)||(51968-52304)
[»] scaffold0337 (1 HSPs)
scaffold0337 (74-435)||(8770-9131)
[»] scaffold0096 (1 HSPs)
scaffold0096 (75-316)||(39508-39746)
[»] scaffold0215 (3 HSPs)
scaffold0215 (432-559)||(16660-16787)
scaffold0215 (399-435)||(16613-16649)
scaffold0215 (549-579)||(16788-16818)
[»] scaffold0075 (1 HSPs)
scaffold0075 (441-559)||(34834-34952)
[»] scaffold0028 (3 HSPs)
scaffold0028 (74-420)||(1780-2115)
scaffold0028 (74-376)||(69500-69801)
scaffold0028 (439-507)||(79311-79378)
[»] scaffold0127 (1 HSPs)
scaffold0127 (340-435)||(9937-10033)
[»] scaffold0026 (4 HSPs)
scaffold0026 (345-435)||(111384-111474)
scaffold0026 (331-410)||(12104-12184)
scaffold0026 (72-130)||(111684-111742)
scaffold0026 (73-130)||(11850-11907)
[»] scaffold0553 (2 HSPs)
scaffold0553 (345-435)||(10463-10553)
scaffold0553 (72-130)||(10194-10252)
[»] scaffold0544 (2 HSPs)
scaffold0544 (345-435)||(1793-1883)
scaffold0544 (72-130)||(1524-1582)
[»] scaffold0139 (2 HSPs)
scaffold0139 (74-177)||(14997-15099)
scaffold0139 (306-410)||(15227-15331)
[»] scaffold0107 (1 HSPs)
scaffold0107 (71-175)||(40529-40633)
[»] scaffold0317 (2 HSPs)
scaffold0317 (306-410)||(1109-1213)
scaffold0317 (74-131)||(1384-1441)
[»] scaffold0162 (2 HSPs)
scaffold0162 (432-555)||(8602-8728)
scaffold0162 (399-435)||(8555-8591)
[»] scaffold0461 (2 HSPs)
scaffold0461 (333-410)||(264-341)
scaffold0461 (74-153)||(8-86)
[»] scaffold0195 (2 HSPs)
scaffold0195 (440-554)||(18918-19035)
scaffold0195 (440-554)||(21002-21119)
[»] scaffold0020 (2 HSPs)
scaffold0020 (335-410)||(102186-102261)
scaffold0020 (74-153)||(101928-102006)
[»] scaffold0815 (1 HSPs)
scaffold0815 (74-151)||(1428-1504)
[»] scaffold0235 (3 HSPs)
scaffold0235 (333-410)||(22849-22926)
scaffold0235 (75-175)||(22594-22693)
scaffold0235 (340-410)||(15198-15268)
[»] scaffold0222 (2 HSPs)
scaffold0222 (333-410)||(16542-16619)
scaffold0222 (74-153)||(16797-16875)
[»] scaffold1276 (1 HSPs)
scaffold1276 (37-105)||(1159-1226)
[»] scaffold0635 (1 HSPs)
scaffold0635 (37-105)||(7978-8046)
[»] scaffold0607 (1 HSPs)
scaffold0607 (35-123)||(3793-3884)
[»] scaffold0388 (2 HSPs)
scaffold0388 (35-105)||(14946-15015)
scaffold0388 (35-101)||(15067-15132)
[»] scaffold0034 (2 HSPs)
scaffold0034 (37-102)||(33893-33958)
scaffold0034 (325-409)||(73007-73091)
[»] scaffold0001 (2 HSPs)
scaffold0001 (37-94)||(176824-176880)
scaffold0001 (52-92)||(152089-152129)
[»] scaffold0064 (1 HSPs)
scaffold0064 (35-123)||(68988-69079)
[»] scaffold0016 (2 HSPs)
scaffold0016 (37-104)||(182010-182078)
scaffold0016 (52-92)||(172087-172127)
[»] scaffold0599 (1 HSPs)
scaffold0599 (54-105)||(1092-1143)
[»] scaffold0481 (1 HSPs)
scaffold0481 (34-104)||(634-705)
[»] scaffold0483 (1 HSPs)
scaffold0483 (326-411)||(11258-11343)
[»] scaffold0008 (1 HSPs)
scaffold0008 (38-123)||(11372-11460)
[»] scaffold0634 (1 HSPs)
scaffold0634 (331-410)||(3384-3464)
[»] scaffold0447 (2 HSPs)
scaffold0447 (37-101)||(7873-7937)
scaffold0447 (37-101)||(12487-12551)
[»] scaffold0383 (1 HSPs)
scaffold0383 (37-101)||(10482-10546)
[»] scaffold0334 (1 HSPs)
scaffold0334 (39-103)||(2140-2203)
[»] scaffold0310 (1 HSPs)
scaffold0310 (71-147)||(17625-17701)
[»] scaffold0117 (2 HSPs)
scaffold0117 (35-123)||(21848-21939)
scaffold0117 (35-105)||(34521-34592)
[»] scaffold0672 (1 HSPs)
scaffold0672 (35-101)||(7430-7497)
[»] scaffold0154 (2 HSPs)
scaffold0154 (331-410)||(30577-30656)
scaffold0154 (73-130)||(30856-30913)
[»] scaffold0146 (1 HSPs)
scaffold0146 (74-153)||(13609-13687)
[»] scaffold0125 (2 HSPs)
scaffold0125 (437-515)||(35265-35343)
scaffold0125 (399-435)||(35359-35395)
[»] scaffold0090 (3 HSPs)
scaffold0090 (37-104)||(31411-31478)
scaffold0090 (73-130)||(18168-18225)
scaffold0090 (343-410)||(17890-17958)
[»] scaffold0071 (1 HSPs)
scaffold0071 (64-140)||(51985-52062)
[»] scaffold0962 (1 HSPs)
scaffold0962 (39-101)||(582-643)
[»] scaffold0413 (1 HSPs)
scaffold0413 (64-123)||(11659-11720)
[»] scaffold0181 (1 HSPs)
scaffold0181 (39-101)||(25487-25548)
[»] scaffold0132 (2 HSPs)
scaffold0132 (37-91)||(3641-3694)
scaffold0132 (39-91)||(11603-11654)
[»] scaffold0025 (2 HSPs)
scaffold0025 (345-410)||(14664-14730)
scaffold0025 (76-130)||(14398-14452)
[»] scaffold0696 (1 HSPs)
scaffold0696 (37-102)||(3354-3419)
[»] scaffold0029 (2 HSPs)
scaffold0029 (331-395)||(111638-111703)
scaffold0029 (73-126)||(111885-111938)
[»] scaffold0042 (2 HSPs)
scaffold0042 (37-101)||(52228-52292)
scaffold0042 (35-123)||(67704-67790)
[»] scaffold0080 (2 HSPs)
scaffold0080 (52-99)||(30007-30054)
scaffold0080 (52-99)||(35472-35519)
[»] scaffold0298 (1 HSPs)
scaffold0298 (49-123)||(602-678)
[»] scaffold0924 (1 HSPs)
scaffold0924 (73-130)||(750-807)
[»] scaffold0453 (1 HSPs)
scaffold0453 (325-386)||(10798-10859)
[»] scaffold0247 (2 HSPs)
scaffold0247 (73-130)||(11340-11397)
scaffold0247 (331-410)||(11065-11144)
[»] scaffold0175 (1 HSPs)
scaffold0175 (52-101)||(18873-18922)
[»] scaffold1555 (1 HSPs)
scaffold1555 (37-81)||(208-251)
[»] scaffold0609 (1 HSPs)
scaffold0609 (72-128)||(5856-5912)
[»] scaffold0500 (1 HSPs)
scaffold0500 (37-101)||(10675-10738)
[»] scaffold0480 (1 HSPs)
scaffold0480 (48-104)||(1490-1545)
[»] scaffold0457 (1 HSPs)
scaffold0457 (52-92)||(10876-10916)
[»] scaffold0338 (1 HSPs)
scaffold0338 (74-123)||(2845-2896)
[»] scaffold0327 (1 HSPs)
scaffold0327 (439-507)||(5729-5796)
[»] scaffold0301 (2 HSPs)
scaffold0301 (52-92)||(11300-11340)
scaffold0301 (52-92)||(15700-15740)
[»] scaffold0058 (1 HSPs)
scaffold0058 (439-507)||(70714-70781)
[»] scaffold0023 (1 HSPs)
scaffold0023 (73-105)||(106021-106053)
[»] scaffold0014 (1 HSPs)
scaffold0014 (49-104)||(189750-189805)
[»] scaffold0970 (1 HSPs)
scaffold0970 (533-579)||(2193-2239)
[»] scaffold0371 (1 HSPs)
scaffold0371 (71-105)||(8544-8578)
[»] scaffold0249 (1 HSPs)
scaffold0249 (72-126)||(13893-13947)
[»] scaffold0141 (1 HSPs)
scaffold0141 (43-105)||(34031-34093)
[»] scaffold0098 (2 HSPs)
scaffold0098 (52-86)||(25185-25219)
scaffold0098 (52-86)||(36055-36089)
[»] scaffold0049 (1 HSPs)
scaffold0049 (43-105)||(80719-80781)
[»] scaffold0485 (1 HSPs)
scaffold0485 (71-104)||(3768-3801)
[»] scaffold0456 (2 HSPs)
scaffold0456 (73-130)||(930-987)
scaffold0456 (73-130)||(8075-8132)
[»] scaffold0720 (1 HSPs)
scaffold0720 (72-128)||(3401-3457)
[»] scaffold0601 (1 HSPs)
scaffold0601 (395-435)||(1233-1273)
[»] scaffold0180 (1 HSPs)
scaffold0180 (74-123)||(11630-11681)
[»] scaffold0015 (1 HSPs)
scaffold0015 (52-92)||(209894-209934)
[»] scaffold0011 (1 HSPs)
scaffold0011 (52-104)||(20779-20831)


Alignment Details
Target: chr6 (Bit Score: 419; Significance: 0; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 76 - 579
Target Start/End: Original strand, 2286769 - 2287289
Alignment:
Q  76 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattagggtt 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2286769 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattagggtt 2286868  T
Q  176 ctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaatcag 275  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  2286869 ctaatactgattttgagttgaaaagtgtaggagacatgttaattatgcttagaatcatgtttagatcattttcaggatttagtaacattgttgtaatcag 2286968  T
Q  276 aattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcct 375  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2286969 aattgggaaaggttgggagttgttagagagaatttgagagattatgcaagattgttggaatgagctgaattgttgttgttgatgcatgttttatgttcct 2287068  T
Q  376 ttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggc--------------attgtgagttttgggtgaaaaatgggtgaa 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||              |||| |||||||||||||||||||||||||    
T  2287069 ttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcatttggagatcaaaattgggagttttgggtgaaaaatgggtgaa 2287168  T
Q  462 aactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgctagttgctgtctgatgaatgca--cgct-taagcgagct 558  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  2287169 aaccgtaacttttgttctgcagaattttgaatggtcgcttaagcgacgctgcaagcgacgctagttgctgtctgatgaatgcatgcgctgtaagcgagct 2287268  T
Q  559 ggtaagcgtgcagtcacagta 579  Q
    |||||||||||||||||||||    
T  2287269 ggtaagcgtgcagtcacagta 2287289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 74 - 410
Target Start/End: Original strand, 19471335 - 19471669
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattaggg 173  Q
    ||||||||||||||| ||| ||||| |||||  |||||||||| ||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattgatttaacatgaat-gttcttgaaataagaattggggaattaggg 19471433  T
Q  174 ttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaatc 273  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||    
T  19471434 ttctaatactgattttgagttgaaaagtgtaggagacatgttaattatgcttagaatcatgttcagatcgtttttaggattctgtaacattgctgtaatc 19471533  T
Q  274 agaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttc 373  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  19471534 agaattgggaaaggttggga-ttgttggagagaatttgagagattatgcaagattgttggaatgagctgaattgttgttgttgatgtatgttttatgttc 19471632  T
Q  374 ctttagatgcctaattgtatattgaacctataaacat 410  Q
    || |||||||||| |||||||||||| || |||||||    
T  19471633 ctatagatgcctagttgtatattgaatctgtaaacat 19471669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 74 - 410
Target Start/End: Complemental strand, 25397228 - 25396895
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattaggg 173  Q
    ||||||||||||||| ||||||||| |||||  |||||||||| ||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattgatttaacat-aattgttcttgagataggaattgtg-aattaggg 25397131  T
Q  174 ttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaatc 273  Q
    ||||| ||||||||||||   ||||||| ||||||||| |||||||||||||||||| |||||||| ||||||| ||||||  |||||||||||||||||    
T  25397130 ttctattactgattttgaaaggaaaagtgtaggagacaagttaattatgcttagaataatgttcaggtcgtttttaggattctgtaacattgttgtaatc 25397031  T
Q  274 agaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttc 373  Q
    | ||||||||||| |||||| |||||||||||||||||||||| | ||||| |||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  25397030 ataattgggaaagattggga-ttgttggagagaatttgagagaatttgcaacattgttagaatgagctgaattgttgttgttgatgcctgttttatgttc 25396932  T
Q  374 ctttagatgcctaattgtatattgaacctataaacat 410  Q
    ||||||||||||| |||| || ||||||| |||||||    
T  25396931 ctttagatgcctagttgtgtactgaacctgtaaacat 25396895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 432 - 559
Target Start/End: Original strand, 1650518 - 1650645
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgctagttgctg 531  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1650518 attgggagttttgggtgaaaaatgggtgaaacccgtaacttttgttctgcataattttgaatggtcgcttaagcgacgctgcaagcgacgctagttgctg 1650617  T
Q  532 tctgatgaatgcacgcttaagcgagctg 559  Q
    ||||||||||||||||||||||| ||||    
T  1650618 tctgatgaatgcacgcttaagcgtgctg 1650645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 432 - 559
Target Start/End: Original strand, 14626543 - 14626670
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgctagttgctg 531  Q
    |||| |||||||||||||||||||| ||||| | |||||||||||| | |||||||||| |||||||||||||||||  |||||||||||||||||||||    
T  14626543 attgggagttttgggtgaaaaatggttgaaacccgtaacttttgttatgcagaattttgcatggtcgcttaagcgacgatgcaagcgacgctagttgctg 14626642  T
Q  532 tctgatgaatgcacgcttaagcgagctg 559  Q
    ||||||||||||||| ||||||| ||||    
T  14626643 tctgatgaatgcacgtttaagcgtgctg 14626670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 345 - 435
Target Start/End: Original strand, 10986448 - 10986538
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  10986448 ttgttgttcttgatgcatgttttatgttcctttagatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgggcattg 10986538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 341 - 435
Target Start/End: Complemental strand, 25598433 - 25598339
Alignment:
Q  341 tgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25598433 tgaattgttgttgttgatgcatgttttatgtttatttagatgtctaattgtatattgaacctataaacaatctttggaaacatgtttgggcattg 25598339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 4477645 - 4477555
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  4477645 ttgttgttgttgatgcgtgttttatgttcctttagatgtctaattgtataatgaacctataaacaatctttggaaacatgtttgggcattg 4477555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 23838986 - 23838896
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  23838986 ttgttgtcgttgatgcatgttttatgttcctttagatacctaattgtataatgaacctataaacaatctttggaaacatgtttgggcattg 23838896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 71 - 191
Target Start/End: Original strand, 24512841 - 24512959
Alignment:
Q  71 atctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaatta 170  Q
    ||||||||| |||||||||||| |||||||| ||  || ||||||| |||||||||||| ||||||||||||||||||||| |||  |||| ||||||||    
T  24512841 atctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattgttttaacatgaattgttcttgagataaaaatt-gggaatta 24512939  T
Q  171 gggttctaatactgattttga 191  Q
    ||||||| |||||||||||||    
T  24512940 gggttct-atactgattttga 24512959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 25598697 - 25598596
Alignment:
Q  76 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttg-aaataggaattggggaattagggt 174  Q
    |||||||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||| ||||||||| ||||||  ||| ||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattgatttaacatgagttgttcttgaaaatagagatt-gggaattagggt 25598599  T
Q  175 tct 177  Q
    |||    
T  25598598 tct 25598596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 35 - 105
Target Start/End: Complemental strand, 1640049 - 1639979
Alignment:
Q  35 gaggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||||||| |||||| ||  ||||||||||||||||||||||||| ||||||||||||||||    
T  1640049 gaggagaatcagattttggtagagtttgattcatcgatctaaggtaagggtgaggctaactctcaatgatt 1639979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 333 - 410
Target Start/End: Complemental strand, 9187294 - 9187217
Alignment:
Q  333 gaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||||||||| |||| ||| |||||| |||||||    
T  9187294 gaatgatctgaattgttgttgttgatgcctgttttgtgttcctttagatgcctagttgtgtatagaacctgtaaacat 9187217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 16132388 - 16132452
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  16132388 ggagaatctgatttttgtagagctttgttcatcaatttaaggtaagggtgaggctaactctcaat 16132452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 1254905 - 1254852
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  1254905 tgtagagctttgttcatcaatctaaggtaagggtgaggctaactctcaatgatt 1254852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 333 - 410
Target Start/End: Original strand, 24513100 - 24513177
Alignment:
Q  333 gaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||||| ||| |||| || ||||||| |||||||    
T  24513100 gaatgatctgaattgttgttgttgatgcctgttttgtgttcctttagatgtctagttgtgtaatgaacctgtaaacat 24513177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 31021685 - 31021741
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  31021685 ggagaatcagattct-gtagagctttgttcatcgatctaaggtaagggtgagactaac 31021741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 140
Target Start/End: Original strand, 19443000 - 19443104
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgta--atatataacttctgaaaattgattta 134  Q
    |||||||| ||||||||||||||||| |||||| ||  ||||||||||||||||||||| ||||| ||| ||   ||| ||| ||||| |||||||||||    
T  19443000 ggagaatctgatttttgtagagcttttttcatcaattcaaggtaagggtgagactaactttcaataattatagtgtatgtaaattctg-aaattgattta 19443098  T
Q  135 acatga 140  Q
    ||||||    
T  19443099 acatga 19443104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 1588808 - 1588763
Alignment:
Q  60 tttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  1588808 tttgttcatcaatctaaggtaagggtgagactaactctcaatgatt 1588763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 13765434 - 13765378
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||    
T  13765434 ggagaatcagattat-gtagagctttgttcatcgatctaaggtaagagtgagactaac 13765378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 23225822 - 23225878
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  23225822 ggagaatcagattct-gtagagttttgttcatcgatctaaggtaagggtgagactaac 23225878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 1589755 - 1589811
Alignment:
Q  48 tttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    ||||||||||| ||||||| || |||||||||||||||||| |||||||||||||||    
T  1589755 tttttgtagagttttgttcttcaatctaaggtaagggtgaggctaactctcaatgat 1589811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 34296175 - 34296224
Alignment:
Q  56 gagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||||||| ||||||||||||||||||  |||||||||||||||    
T  34296175 gagctttgttcatcaatctaaggtaagggtgaggttaactctcaatgatt 34296224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 9621528 - 9621568
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  9621528 tgtagagctttgttcatcaatctaaggtaagggtgagacta 9621568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 14626496 - 14626532
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||||||||||||||    
T  14626496 acctataaacattctttggaaacatgtttgggcattg 14626532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 409
Target Start/End: Complemental strand, 31252230 - 31252146
Alignment:
Q  325 gattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaaca 409  Q
    ||||||||||||||  ||||||| ||||||| ||||||||||  ||||||||| |||| ||| |||| ||| |||||| ||||||    
T  31252230 gattgttggaatgagttgaattgatgttgttaatgcatgtttcgtgttcctttcgatgactagttgtgtatagaacctgtaaaca 31252146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 34639985 - 34640043
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  34639985 tctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattga 34640043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 34646659 - 34646717
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  34646659 tctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattga 34646717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 15816660 - 15816712
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    ||||||||||||||||||||||||||||||||| |  | ||||||||||||||    
T  15816660 ctaaggtaagggtgagactaactctcaatgattttcgattatataacttctga 15816712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 16884590 - 16884627
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgaga 89  Q
    |||||||||||||||||| |||||||||||||||||||    
T  16884590 tgtagagctttgttcatcaatctaaggtaagggtgaga 16884627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 21119769 - 21119826
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    |||||||  |||||||||| ||||||||||||| ||  ||||||||||||||||||||    
T  21119769 ggagaatttgatttttgtaaagctttgttcatcaattcaaggtaagggtgagactaac 21119826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 29614146 - 29614203
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  29614146 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 29614203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 1658125 - 1658161
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||| |||||||||||||||||||||||||    
T  1658125 acctataaacaatctttggaaacatgtttgggcattg 1658161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 4477912 - 4477856
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 4477856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 23839253 - 23839197
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 23839197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 23956950 - 23956903
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggt 85  Q
    ||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  23956950 ggagaatcagattct-gtagagctttgttcatcgatctaaggtaggggt 23956903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 25739395 - 25739355
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  25739395 tgtagagctttgttcatcaatctaaggtaagggtgggacta 25739355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 31252479 - 31252423
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaatt 128  Q
    |||||||||||||||||| || || | ||||||| |||||||||| |||||||||||    
T  31252479 tctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaatt 31252423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 35009818 - 35009854
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||| |||||||||||||||||||||||||    
T  35009818 acctataaacaatctttggaaacatgtttgggcattg 35009854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 430
Target Start/End: Original strand, 1650471 - 1650502
Alignment:
Q  399 acctataaacattctttggaaacatgtttggg 430  Q
    ||||||||||||||||||||||||||||||||    
T  1650471 acctataaacattctttggaaacatgtttggg 1650502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 432 - 507
Target Start/End: Complemental strand, 31628131 - 31628057
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcga 507  Q
    |||| ||||||||||||||||| ||||| || | ||||| ||| |||| |||| || |||||||||||||||||||    
T  31628131 attgggagttttgggtgaaaaaggggtggaacccgtaacattt-ttctgcagatttatgaatggtcgcttaagcga 31628057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 9184970 - 9185028
Alignment:
Q  46 gatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    |||||||| |||| |||||||||| |   |||||||||||||||||| |||||||||||    
T  9184970 gatttttggagagttttgttcatcaaatcaaggtaagggtgagactatctctcaatgat 9185028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 329 - 391
Target Start/End: Original strand, 11288922 - 11288984
Alignment:
Q  329 gttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgt 391  Q
    ||||||||||  ||||||| ||||||| |||||| | |||||||||||| |||||||| ||||    
T  11288922 gttggaatgagttgaattgatgttgttaatgcatatgttatgttccttttgatgcctagttgt 11288984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 15458546 - 15458492
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaa 126  Q
    ||||||||||||||| || || || ||||||||| |||||||||| |||||||||    
T  15458546 tctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15458492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 15465141 - 15465087
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaa 126  Q
    ||||||||||||||| || || || ||||||||| |||||||||| |||||||||    
T  15465141 tctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15465087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 930095 - 930152
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||  |||||||||||||    
T  930095 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattga 930152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 18800493 - 18800436
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    |||| ||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  18800493 ctaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 18800436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 25348542 - 25348485
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgat 131  Q
    ||||||||||||||||||| |||||||| ||  || |||| || ||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattgat 25348485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 5109678 - 5109742
Alignment:
Q  38 gagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||| |||||||| ||||||| ||||||| || ||  |||||||||||||| ||||||||||||    
T  5109678 gagaaccagattttctgtagagttttgttcttcaattcaaggtaagggtgaggctaactctcaat 5109742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 9187550 - 9187498
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaa 126  Q
    ||||||||||||||||||| |||||||| ||  ||||| |||| |||||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 12168418 - 12168366
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaa 125  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| ||||||||    
T  12168418 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 12168366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 14152189 - 14152153
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  14152189 acctataaacaatctttggaaacatgtttgagcattg 14152153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 19287327 - 19287275
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaa 125  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| ||||||||    
T  19287327 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19287275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 19785869 - 19785921
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaa 125  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| ||||||||    
T  19785869 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19785921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 19878511 - 19878459
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaa 125  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| ||||||||    
T  19878511 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19878459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 23620194 - 23620253
Alignment:
Q  41 aatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||| |||||| ||||||||| ||||||| ||  |||||||||||||| ||||||||||||    
T  23620194 aatctgattttcgtagagctt-gttcatcaattcaaggtaagggtgaggctaactctcaat 23620253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 28288508 - 28288540
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgat 104  Q
    ||||||||||||||||||||| |||||||||||    
T  28288508 tctaaggtaagggtgagactatctctcaatgat 28288540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 507
Target Start/End: Complemental strand, 33324532 - 33324465
Alignment:
Q  439 gttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcga 507  Q
    |||| |||||||||| |||||||| | ||||| ||| |||| ||||||| |||||| ||||||||||||    
T  33324532 gtttggggtgaaaaaggggtgaaacccgtaacattt-ttctgcagaattatgaatgatcgcttaagcga 33324465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 507
Target Start/End: Original strand, 35136419 - 35136486
Alignment:
Q  439 gttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcga 507  Q
    |||||||||||||||  ||||||| | ||||| ||| ||||  |||||| |||||||||||||||||||    
T  35136419 gttttgggtgaaaaagaggtgaaacccgtaacattt-ttctgtagaattatgaatggtcgcttaagcga 35136486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 411; Significance: 0; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 76 - 559
Target Start/End: Complemental strand, 16801081 - 16800584
Alignment:
Q  76 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattagggtt 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16801081 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattagggtt 16800982  T
Q  176 ctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaatcag 275  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16800981 ctaatactgattttgagttgaaaagtgtaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaatcag 16800882  T
Q  276 aattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcct 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16800881 aattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgagctgaattgttgttgttgatgcatgttttatgttcct 16800782  T
Q  376 ttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggc--------------attgtgagttttgggtgaaaaatgggtgaa 461  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||              |||| |||||||||||||||||||||||||    
T  16800781 ttagatgcctaattgtatattgaacctataaacattcttcggaaacatgtttgggcattgggagatcaaaattgggagttttgggtgaaaaatgggtgaa 16800682  T
Q  462 aactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgctagttgctgtctgatgaatgcacgcttaagcgagctg 559  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  16800681 aaccgtaacttttgttctgcagaattttgaatggtcgcttaagcgacgctgcaagcgacgctagttcctgtctgatgactgcacgcttaagcgtgctg 16800584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 432 - 559
Target Start/End: Complemental strand, 15614672 - 15614545
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgctagttgctg 531  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15614672 attgggagttttgggtgaaaaatgggtgaaacctgtaacttttgttctgcagaattttgaatggtcgcttaagcgactctgcaagcgacgctagttgctg 15614573  T
Q  532 tctgatgaatgcacgcttaagcgagctg 559  Q
    ||||||||||||||||||||||| ||||    
T  15614572 tctgatgaatgcacgcttaagcgtgctg 15614545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 331 - 435
Target Start/End: Original strand, 20248034 - 20248139
Alignment:
Q  331 tggaatgaactg-aattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgg 429  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  20248034 tggaatgatctgtaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgg 20248133  T
Q  430 gcattg 435  Q
    ||||||    
T  20248134 gcattg 20248139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 331 - 435
Target Start/End: Original strand, 38311053 - 38311158
Alignment:
Q  331 tggaatgaactg-aattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgg 429  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  38311053 tggaatgatctgtaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgg 38311152  T
Q  430 gcattg 435  Q
    ||||||    
T  38311153 gcattg 38311158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 343 - 435
Target Start/End: Original strand, 14763024 - 14763116
Alignment:
Q  343 aattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  14763024 aattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgggcattg 14763116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 9534116 - 9534026
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| | |||||||||||||||||||||||    
T  9534116 ttgttgttgttgatgcatgttttatgttcctttagatgtctaattgtataatgaacctataaacaatatttggaaacatgtttgggcattg 9534026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 345 - 435
Target Start/End: Original strand, 23370773 - 23370863
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  23370773 ttgttgttgttgatgcgtgttttatgttcctttagatgtcttattgtataatgaacctataaacaatctttggaaacatgtttgggcattg 23370863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 333 - 435
Target Start/End: Complemental strand, 51301392 - 51301291
Alignment:
Q  333 gaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggca 432  Q
    |||||| |||||||||||||||||||||||||||||||||  |||||||||||||||| ||| |||||||||||||| |||||||||||||| |||||||    
T  51301392 gaatgatctgaattgttgttgttgatgcatgttttatgtttatttagatgcctaattgcataatgaacctataaacaatctttggaaacatg-ttgggca 51301294  T
Q  433 ttg 435  Q
    |||    
T  51301293 ttg 51301291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 466 - 559
Target Start/End: Complemental strand, 15575619 - 15575526
Alignment:
Q  466 gtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgctagttgctgtctgatgaatgcacgcttaagcgagctg 559  Q
    |||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  15575619 gtaacttttgttctgcagaattttgaatggtcacttaagcgatgctgcaagcgacgctagttgatgtctgatgaatgcacgcttaagcgtgctg 15575526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 2247628 - 2247701
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgtaa--tatataacttctga 123  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||    
T  2247628 tgtagagctttgttcatcaatctaaggtaagggtgagactaactctcaataattataaattatataacttctga 2247701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 52212396 - 52212459
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  52212396 ggagaatcagatttt-gtagagctttgttcatcaatctaaggtaagggtgaggctaactctcaat 52212459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 340 - 411
Target Start/End: Original strand, 13302502 - 13302573
Alignment:
Q  340 ctgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacatt 411  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||| |||||||| | |||| ||||||||    
T  13302502 ctgaattgttgttgttgatgcctgttttgtgttcctttagatgcctagttgtatataggacctgtaaacatt 13302573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 340 - 411
Target Start/End: Original strand, 13324050 - 13324121
Alignment:
Q  340 ctgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacatt 411  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||  |||||||| | |||||||||||||    
T  13324050 ctgaattgttgttgttgatgcctgttttgtgttcctttagatgcctggttgtatatagcacctataaacatt 13324121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 42615 - 42559
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  42615 ggagaatcagattct-gtagagctttgttcatcgatctaaggtaagggtgagactaac 42559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 13837212 - 13837159
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  13837212 tgtagagttttgttcatcaatctaaggtaagggtgagactaactctcaatgatt 13837159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 16324505 - 16324561
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  16324505 ggagaatcagattct-gtagagctttgttcatcgatctaaggtaagggtgagactaac 16324561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 333 - 410
Target Start/End: Original strand, 17240768 - 17240845
Alignment:
Q  333 gaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||| ||||||||||||||||||||| ||||||   |||||||||||||||| |||| |||||||||| |||||||    
T  17240768 gaatgatctgaattgttgttgttgatgcctgttttgaattcctttagatgcctagttgtgtattgaacctgtaaacat 17240845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 23392782 - 23392847
Alignment:
Q  37 ggagaatcagatttttg-tagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||||||||||    
T  23392782 ggagaatcagatttttggtagagttttattcatcaatctaaggtaagggtgagactaactctcaat 23392847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 51602503 - 51602556
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  51602503 tgtagagctttgttcatcaatctaaggtaagggtgaggctaactctcaatgatt 51602556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 11913867 - 11913816
Alignment:
Q  54 tagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  11913867 tagagctttgttcatcaatctaaggtaagggtgaggctaactctcaatgatt 11913816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 340 - 411
Target Start/End: Original strand, 13313158 - 13313229
Alignment:
Q  340 ctgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacatt 411  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| || |||||||| | |||| ||||||||    
T  13313158 ctgaattgttgttgttgatgcctgttttgtgttcctttagatgcatagttgtatataggacctgtaaacatt 13313229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 55291567 - 55291634
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    |||||||| ||||||||||||| |||||||||| ||  |||||||||||||||||| |||||||||||    
T  55291567 ggagaatctgatttttgtagagatttgttcatcaattcaaggtaagggtgagactatctctcaatgat 55291634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 333 - 410
Target Start/End: Complemental strand, 18929042 - 18928965
Alignment:
Q  333 gaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||| ||||||| |||||||| |||| |||||| |||||||||||||||||| |||| ||||| |||| |||||||    
T  18929042 gaatgatctgaattattgttgttaatgcctgttttgtgttcctttagatgcctagttgtgtattggacctgtaaacat 18928965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 178444 - 178548
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgtaa---tatataacttctgaaaattgattt 133  Q
    |||||||| ||||||||||||||||||||||||  |  |||||||||||||| |||||| ||||| ||| |||   ||| ||| ||||| ||||||||||    
T  178444 ggagaatctgatttttgtagagctttgttcatcagttcaaggtaagggtgaggctaactttcaataattataagtgtatgtaaattctg-aaattgattt 178542  T
Q  134 aacatg 139  Q
    ||||||    
T  178543 aacatg 178548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 17240513 - 17240591
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa 153  Q
    ||||||||||||||||||| |||||||| ||  ||||| |||| |||||||||||||| |||  ||||||||||||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaa-ttgaattgttcttgaaa 17240591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 17513901 - 17513854
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctca 99  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  17513901 tgtagagctttgttcatcaatctaaggtaagggtgagactaacactca 17513854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 52 - 94
Target Start/End: Complemental strand, 13437312 - 13437270
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  13437312 tgtagagctttgttcatcaatctaaggtaagggtgagactaac 13437270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 10551411 - 10551354
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    |||||||| |||||||||||||||||||||||| ||  ||||||||||||||| ||||    
T  10551411 ggagaatctgatttttgtagagctttgttcatcaattcaaggtaagggtgagattaac 10551354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 11325023 - 11325076
Alignment:
Q  49 ttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatg 102  Q
    ||||||||||||||||||||| |   ||||||||||||||||||||||||||||    
T  11325023 ttttgtagagctttgttcatcaaatcaaggtaagggtgagactaactctcaatg 11325076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 30123352 - 30123405
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||| |||||||||| ||||||||||||| |||| ||||||||||||||||    
T  30123352 tgtagagttttgttcatcaatctaaggtaaggttgaggctaactctcaatgatt 30123405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 13025534 - 13025598
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||||||||||||||||||||| ||  || ||||||||||| |||||| |||||    
T  13025534 ggagaatctgatttttgtagagctttgttcatcaattcaaagtaagggtgaggctaactttcaat 13025598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 15239128 - 15239079
Alignment:
Q  55 agagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    ||||||||||||||| |   ||||||||||||||||||||||||||||||    
T  15239128 agagctttgttcatcaaatcaaggtaagggtgagactaactctcaatgat 15239079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 17547435 - 17547492
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    |||||||| |||||||||||||||||||||||| ||  ||||| |||||||| |||||    
T  17547435 ggagaatctgatttttgtagagctttgttcatcaattcaaggttagggtgaggctaac 17547492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 18929300 - 18929243
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgat 131  Q
    ||||||||||||||||||| |||||||| ||  | |||||||| ||||||||||||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgat 18929243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 9534382 - 9534326
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 9534326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 13029126 - 13029190
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||||||||||| ||||||||| ||  || ||||||||||| |||||| |||||    
T  13029126 ggagaatctgatttttgtagagcgttgttcatcaattcaaagtaagggtgaggctaactttcaat 13029190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 16828259 - 16828299
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  16828259 tgtagagctttgttcatcaatctaaggtaagggtgggacta 16828299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 430
Target Start/End: Complemental strand, 15614719 - 15614688
Alignment:
Q  399 acctataaacattctttggaaacatgtttggg 430  Q
    ||||||||||||||||||||||||||||||||    
T  15614719 acctataaacattctttggaaacatgtttggg 15614688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 410
Target Start/End: Original strand, 16801728 - 16801799
Alignment:
Q  340 ctgaattgttgttgttgatgcatgttttatgttcc-tttagatgcctaattgtatattgaacctataaacat 410  Q
    ||||||||||||||||||||| |||||| | | || ||||||||| || |||||||| |||||| |||||||    
T  16801728 ctgaattgttgttgttgatgcctgttttgtatcccttttagatgcttagttgtatatagaacctgtaaacat 16801799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 20247791 - 20247845
Alignment:
Q  76 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 20247845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 23370504 - 23370562
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||| ||||| |||||||| ||  |||| ||||| |||||||||||||    
T  23370504 tctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattga 23370562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 24193009 - 24192955
Alignment:
Q  76 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 24192955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 16801467 - 16801523
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    |||||||||||||||||||| |||||||| ||  | |||||||| |||||||||||||    
T  16801467 ctaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattga 16801523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 515
Target Start/End: Original strand, 22144722 - 22144755
Alignment:
Q  482 agaattttgaatggtcgcttaagcgactctgcaa 515  Q
    ||||||||||||||||||||||||||| ||||||    
T  22144722 agaattttgaatggtcgcttaagcgacgctgcaa 22144755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 24933827 - 24933880
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaa 125  Q
    ||||||||||||||||||||| |||||||| ||  |||| ||||| ||||||||    
T  24933827 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 24933880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 14762758 - 14762814
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||| ||||| || ||  |||| ||||| |||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 14762814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 30205576 - 30205639
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||| | |||||| ||||||||| |||| || ||  |||||||||||||||||||||||||||    
T  30205576 ggagaaactgattttcgtagagctt-gttcgtcaattcaaggtaagggtgagactaactctcaat 30205639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 41455097 - 41455149
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaa 125  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| ||||||||    
T  41455097 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 41455149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 47984535 - 47984499
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  47984535 acctataaacaatctttggaaacatgtttgggtattg 47984499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 47993822 - 47993786
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  47993822 acctataaacaatctttggaaacatgtttgggtattg 47993786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 48003109 - 48003073
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  48003109 acctataaacaatctttggaaacatgtttgggtattg 48003073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 48012395 - 48012359
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  48012395 acctataaacaatctttggaaacatgtttgggtattg 48012359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 507
Target Start/End: Original strand, 55441257 - 55441324
Alignment:
Q  439 gttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcga 507  Q
    ||||||||||||||| ||||| || | ||||| ||| |||| |||| || |||||||||||||||||||    
T  55441257 gttttgggtgaaaaaggggtggaacccgtaacattt-ttctgcagatttatgaatggtcgcttaagcga 55441324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 378; Significance: 0; HSPs: 4)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 34 - 435
Target Start/End: Original strand, 35399 - 35800
Alignment:
Q  34 ggaggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgattt 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  35399 ggaggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtaagactaactctcaatgattgtaatgtataacttctgaaaattgattt 35498  T
Q  134 aacatgaattgttcttgaaataggaattggggaattagggttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcat 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35499 aacatgaattgttcttgaaataggaattggggaattagggttctaatactgattttgagttgaaaagtgtaggagacatgttaattatgcttagaatcat 35598  T
Q  234 gttcagatcgttttcaggatttagtaacattgttgtaatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttgg 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35599 gttcagatcgttttcaggatttagtaacattgttgtaatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttgg 35698  T
Q  334 aatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcat 433  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35699 aatgagccgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacaatctttggaaacatgtttgggcat 35798  T
Q  434 tg 435  Q
    ||    
T  35799 tg 35800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 34525 - 34607
Alignment:
Q  325 gattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaa 407  Q
    ||||||| |||||| |||||||||||||||| |||| |||||| |||||||||||||||||| |||| |||||||||| ||||    
T  34525 gattgttagaatgatctgaattgttgttgttaatgcttgttttgtgttcctttagatgcctagttgtgtattgaacctgtaaa 34607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 34276 - 34377
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttga-aataggaattggggaattagg 172  Q
    ||||||||||||||||||| ||||| || ||  || ||||||| |||||||||||| ||||||||||||||||||||| ||||  |||| ||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattgttttaacatgaattgttcttgagaataaaaatt-gggaattagg 34374  T
Q  173 gtt 175  Q
    |||    
T  34375 gtt 34377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 437 - 515
Target Start/End: Original strand, 35816 - 35894
Alignment:
Q  437 gagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattt-tgaatggtcgcttaagcgactctgcaa 515  Q
    ||||||||||||||||| ||||| || | ||||| ||| |||| ||||| || |||||||||||||||||||| ||||||    
T  35816 gagttttgggtgaaaaaggggtggaacccgtaacattt-ttctgcagaaattctgaatggtcgcttaagcgacgctgcaa 35894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 366; Significance: 0; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 34 - 427
Target Start/End: Complemental strand, 14912177 - 14911784
Alignment:
Q  34 ggaggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgattt 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14912177 ggaggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggttagactaactctcaatgattgtaatatataacttctgaaaattgattt 14912078  T
Q  134 aacatgaattgttcttgaaataggaattggggaattagggttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcat 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  14912077 aacatgaattgttcttgaaataggaattggggaattagggttctaatacagattttgagttgaaaagtgtaggtgacatgttaattatgcttagaatcat 14911978  T
Q  234 gttcagatcgttttcaggatttagtaacattgttgtaatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttgg 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14911977 gttcagatcgttttcaggatttagtaacattgttgtaatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttgg 14911878  T
Q  334 aatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgttt 427  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14911877 aatgagatgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacaatctttggaaacatgttt 14911784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 74 - 410
Target Start/End: Complemental strand, 8834951 - 8834617
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattaggg 173  Q
    ||||||||||||||| |||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattgatttaacatgaattgttcttgaaataggaatt-gagaattaggg 8834853  T
Q  174 ttctaatactgattttg-agttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaat 272  Q
    ||||| ||||| | ||| ||   |||||| |||||  |||||||||||||||||||||||||||||||||| ||| ||||| | ||||||||| ||||||    
T  8834852 ttctattactgttattgaagggaaaaagtgtaggaatcatgttaattatgcttagaatcatgttcagatcgattttaggatgttgtaacattgatgtaat 8834753  T
Q  273 cagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgtt 372  Q
    | |||||||||||| || ||| ||| |||||| ||||||||||| | ||||||| ||||||||| | |||||||||||||||||||||||||||| ||||    
T  8834752 cggaattgggaaagattagga-ttgctggaga-aatttgagagaatttgcaagagtgttggaataagctgaattgttgttgttgatgcatgttttgtgtt 8834655  T
Q  373 cctttagatgcctaattgtatattgaacctataaacat 410  Q
    ||||||||||||| ||||| || ||||||| |||||||    
T  8834654 cctttagatgccttattgtgtaatgaacctgtaaacat 8834617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 74 - 410
Target Start/End: Complemental strand, 15308176 - 15307842
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattaggg 173  Q
    |||| |||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | |||||||  | ||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattgatttaacatgaattgttcttgagaaaggaattatg-aattaggg 15308078  T
Q  174 ttctaatactgattttg--agttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaa 271  Q
    ||||| |||||||||||  ||   |||||| |||||  |||||| ||||||||||||| | ||||||||||| ||| |||||   |||||||||||||||    
T  15308077 ttctattactgattttggaagggaaaaagtgtaggaatcatgttgattatgcttagaaacctgttcagatcgattttaggatgctgtaacattgttgtaa 15307978  T
Q  272 tcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgt 371  Q
    ||||||||||||||| || ||| ||||||  ||||| |||| ||| | | ||||| ||||||||| |  |||||||||||  |||||||||| |||||||    
T  15307977 tcagaattgggaaagattagga-ttgttg--gagaacttgatagaatttacaagagtgttggaataagttgaattgttgtaattgatgcatgatttatgt 15307881  T
Q  372 tcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||||||||||| ||| |||| ||||||| |||||||    
T  15307880 tcctttagatgccttattatatactgaacctgtaaacat 15307842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 74 - 410
Target Start/End: Complemental strand, 15245271 - 15244937
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattaggg 173  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | |||||||   |||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattgatttaacatgaattgttcttgagaaaggaatt-atgaattaggg 15245173  T
Q  174 ttctaatactgattttg--agttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaa 271  Q
    ||||| |||||||||||  ||   |||||| |||||  |||||| ||||||||||||| | | ||||||||| ||| |||||   |||||||||||||||    
T  15245172 ttctattactgattttggaagggaaaaagtgtaggaatcatgttgattatgcttagaaacctcttcagatcgattttaggatgctgtaacattgttgtaa 15245073  T
Q  272 tcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgt 371  Q
    ||||||||||||||| ||  || ||||||  ||||| |||||||| | | ||||| || |||||  | |||||||||||| ||||||||||| |||||||    
T  15245072 tcagaattgggaaagattatga-ttgttg--gagaacttgagagaatttacaagagtgatggaacaagctgaattgttgtggttgatgcatgatttatgt 15244976  T
Q  372 tcctttagatgcctaattgtatattgaacctataaacat 410  Q
    || |||||||| || ||| |||| ||||||| |||||||    
T  15244975 tcgtttagatggcttattatatactgaacctgtaaacat 15244937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 74 - 408
Target Start/End: Complemental strand, 13888697 - 13888366
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattaggg 173  Q
    ||||||||||||||| |||||||||||||||  |||| ||||| ||||||||||||||||||||||||||| | |||| ||||||||| | |||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattgatttaacatgaattgct-ttgagataggaatt-gtgaattaggg 13888600  T
Q  174 ttctaatactgattttg-agttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaat 272  Q
    ||||  ||||||||||| ||   |||||| |||||  |||||||||||| || |||| | ||||| ||||| ||| |||||   ||||||||||||||||    
T  13888599 ttctgttactgattttgaagggaaaaagtgtaggaatcatgttaattatactcagaaacctgttctgatcgattttaggatgctgtaacattgttgtaat 13888500  T
Q  273 cagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgtt 372  Q
    |||||||||||||| || ||| |||||||||| | ||||||||| | | | ||| ||||| ||| | |||||||||||  ||||||||||||||||||||    
T  13888499 cagaattgggaaagattagga-ttgttggaga-attttgagagaatttacgagagtgttgaaataagctgaattgttgaagttgatgcatgttttatgtt 13888402  T
Q  373 cctttagatgcctaattgtatattgaacctataaac 408  Q
    ||||||||||||| ||| |||| ||||||| |||||    
T  13888401 cctttagatgccttattatatactgaacctgtaaac 13888366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 74 - 435
Target Start/End: Complemental strand, 18213823 - 18213463
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa--taggaattggggaattag 171  Q
    ||||||||||||||| |||||  ||||||||| |||||||| | |||||||||||| ||| |   |||||||||||||||  || |||||||| ||||||    
T  18213823 taaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattgttttgattagaattgttcttgaaaaataagaattggg-aattag 18213725  T
Q  172 ggttctaatactgattttgagttgaaaagttta-ggagacatgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttgt 269  Q
    ||||||| ||||||||||| |  ||||||  || |||  ||||||||||||||||||||| ||| ||||||||| ||| |||| ||| |||  |||||||    
T  18213724 ggttcta-tactgattttg-gaagaaaagagtaaggattcatgttaattatgcttagaattcatattcagatcgattttaggaatta-taatgttgttgt 18213628  T
Q  270 aatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttat 369  Q
    |||| ||||| ||| ||||| ||| | |||||||| || ||| | ||   ||||| ||||   ||||||  |||||||||||||||||||||||||||||    
T  18213627 aatccgaatttggagaggttcgga-tggttggagaaaaattgggggaaattgcaaaattgggagaatgagatgaattgttgttgttgatgcatgttttat 18213529  T
Q  370 gttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  18213528 gttcctttagatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgggcattg 18213463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 15408198 - 15408093
Alignment:
Q  70 gatctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaatt 169  Q
    ||||||||||||||||||||||| |||||||| ||  || ||||||| |||||||||||| ||||||||||||||||||||||||   ||||||| ||||    
T  15408198 gatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgttttaacatgaattgttcttgaaatgaaaattgggaaatt 15408099  T
Q  170 agggtt 175  Q
    ||||||    
T  15408098 agggtt 15408093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 14035831 - 14035744
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |  | ||||||||||||||    
T  14035831 ggagaatcagattct-gtagaactttgttcatcgatctaaggtaagggtgagactaactctcaatgattatagattatataacttctga 14035744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 16370686 - 16370753
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    |||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  16370686 ggagaatctgatttttgtagagctttgttcatcaattcaaggtaagggtgagactaactctcaatgat 16370753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 21188927 - 21188994
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  21188927 ggagaatcagatttt-gtagagctttgttcatcgatctaaggtaagggtgaggttaactttcaatgatt 21188994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 410
Target Start/End: Complemental strand, 14486496 - 14486382
Alignment:
Q  295 ttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtata 394  Q
    |||||||||| |||| |||||| | ||| |||||||| |||||| ||||||||||||||||||||  |||||| |||||||||||||| ||| ||||  |    
T  14486496 ttgttggagaaaattggagagaat-tgctagattgttagaatgagctgaattgttgttgttgatgtctgttttgtgttcctttagatgtctagttgtgca 14486398  T
Q  395 ttgaacctataaacat 410  Q
    || ||||| |||||||    
T  14486397 ttaaacctgtaaacat 14486382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 15415844 - 15415911
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    |||||||| |||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  15415844 ggagaatctgatttttggagagctttgttcatcaattcaaggtaagggtgagactaactctcaatgat 15415911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 15712659 - 15712715
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  15712659 ggagaatcagattct-gtagagctttgttcatcgatctaaggtaagggtgagactaac 15712715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 18230829 - 18230760
Alignment:
Q  37 ggagaatcagatttttg-tagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||| ||||||||||||||||    
T  18230829 ggagaatcagatttttggtagagttttattcatcaatctaaggtaagggtgaggctaactctcaatgatt 18230760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 28386331 - 28386275
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  28386331 ggagaatcagattct-gtagagctttgttcatcgatctaaggtaagggtgagactaac 28386275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 295 - 408
Target Start/End: Complemental strand, 13887621 - 13887509
Alignment:
Q  295 ttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtata 394  Q
    |||||||||| | ||||||||| | | | ||| ||||| ||| | |||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||    
T  13887621 ttgttggaga-attttgagagaatttacgagagtgttgaaataagctgaattgttgcagttgatgcatgttttatgttcctttagatgccttattatata 13887523  T
Q  395 ttgaacctataaac 408  Q
     | ||||| |||||    
T  13887522 ctaaacctgtaaac 13887509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 15407945 - 15407860
Alignment:
Q  325 gattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    ||||||| |||||| ||||||||||||| ||||||| |||||| ||||||||| |||||||| |||| ||| | |||| |||||||    
T  15407945 gattgttagaatgatctgaattgttgtttttgatgcctgttttgtgttcctttcgatgcctagttgtgtataggacctgtaaacat 15407860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 14049696 - 14049605
Alignment:
Q  35 gaggagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    ||||||||||||||||| ||||||| ||||||| || ||| |||||||||||||||| |||||||||| ||| |  | ||||||||||||||    
T  14049696 gaggagaatcagattttctgtagagttttgttcttcaatcaaaggtaagggtgagaccaactctcaataattatagattatataacttctga 14049605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 37 - 140
Target Start/End: Complemental strand, 15991353 - 15991248
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgtaa---tatataacttctgaaaattgattt 133  Q
    |||||||| |||||||||||||||||||||||| ||  | |||||||||||| |||||| ||||| ||| |||   ||| ||| ||||| ||||||||||    
T  15991353 ggagaatctgatttttgtagagctttgttcatcaattcatggtaagggtgaggctaactttcaataattataagtgtatgtaaattctg-aaattgattt 15991255  T
Q  134 aacatga 140  Q
    |||||||    
T  15991254 aacatga 15991248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 20898714 - 20898778
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| ||||||||||||| |||||||||| ||  |||||||||||||| ||||||||||||    
T  20898714 ggagaatctgatttttgtagagatttgttcatcaattcaaggtaagggtgaggctaactctcaat 20898778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 56114737 - 56114793
Alignment:
Q  49 ttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||| ||| ||||||||| |||||||||||||||||| ||||||||||||||||    
T  56114737 ttttgtaaagcgttgttcatcaatctaaggtaagggtgaggctaactctcaatgatt 56114793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 15447354 - 15447403
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  15447354 tgtagagctttgttcatcgatctaaggtaagagtgaggctaactttcaat 15447403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 12729809 - 12729860
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgag 88  Q
    |||||||| |||||||||||||||||||||||| ||  ||||||||||||||    
T  12729809 ggagaatctgatttttgtagagctttgttcatcaattcaaggtaagggtgag 12729860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 16277246 - 16277312
Alignment:
Q  39 agaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||| ||||||||||||| |||||||||| ||  |||||||||||||| ||||||  ||||||||    
T  16277246 agaatctgatttttgtagagatttgttcatcaattcaaggtaagggtgaggctaacttgcaatgatt 16277312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 11847909 - 11847828
Alignment:
Q  331 tggaatgaactg-aattgttgttg-ttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||||| ||| ||||||||||| ||||||  |||||| |||||||||||||| |||||||||||| | |||| |||||||    
T  11847909 tggaatgatctgtaattgttgttggttgatgactgttttgtgttcctttagatgtctaattgtatataggacctgtaaacat 11847828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 33661568 - 33661621
Alignment:
Q  49 ttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatg 102  Q
    ||||||| ||||||||||||| ||  |||||||||||||| |||||||||||||    
T  33661568 ttttgtacagctttgttcatcaattcaaggtaagggtgaggctaactctcaatg 33661621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 13878867 - 13878804
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||| ||||||||| ||||||| ||  |||||||||||||| ||||||||||||    
T  13878867 ggagaatctgattttcgtagagctt-gttcatcaattcaaggtaagggtgaggctaactctcaat 13878804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 13882472 - 13882409
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||| ||||||||| ||||||| ||  |||||||||||||| ||||||||||||    
T  13882472 ggagaatctgattttcgtagagctt-gttcatcaattcaaggtaagggtgaggctaactctcaat 13882409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 15076448 - 15076384
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||| || |||||||| |||| |||||||||| |  ||||||||||||||||||| ||||||||    
T  15076448 ggagattctgatttttggagagttttgttcatcaaattaaggtaagggtgagactatctctcaat 15076384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 15239794 - 15239834
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  15239794 tgtagagctttgttcttcaatctaaggtaagggtgagacta 15239834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 325 - 409
Target Start/End: Complemental strand, 27906072 - 27905988
Alignment:
Q  325 gattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaaca 409  Q
    ||||||||||||||  ||||||| ||||||| ||||||  ||| ||||||||| |||||||| |||| ||| | |||| ||||||    
T  27906072 gattgttggaatgagttgaattgatgttgttaatgcatactttgtgttcctttcgatgcctagttgtgtataggacctgtaaaca 27905988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 30148033 - 30147942
Alignment:
Q  35 gaggagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    ||||||||||||||||| || |||| ||| ||| || ||| || |||||||||||||||||||||||| ||| |  | ||||||||||||||    
T  30148033 gaggagaatcagattttctgaagagttttattcttcaatcaaaagtaagggtgagactaactctcaataattatagattatataacttctga 30147942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 437 - 515
Target Start/End: Complemental strand, 14911760 - 14911682
Alignment:
Q  437 gagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattt-tgaatggtcgcttaagcgactctgcaa 515  Q
    ||||||||||||||||| ||||| || | ||||| ||| |||| ||||| || |||||||||||||||||||| ||||||    
T  14911760 gagttttgggtgaaaaaggggtggaacccgtaacattt-ttctgcagaaattctgaatggtcgcttaagcgacgctgcaa 14911682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 4171969 - 4171907
Alignment:
Q  43 tcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||  ||| || |||||| |||||||||||||||||| ||||||  ||||||||    
T  4171969 tcagatttttgttaagcattattcatcaatctaaggtaagggtgaggctaacttgcaatgatt 4171907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 31116226 - 31116288
Alignment:
Q  43 tcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||  ||| || |||||| |||||||||||||||||| ||||||  ||||||||    
T  31116226 tcagatttttgttaagcattattcatcaatctaaggtaagggtgaggctaacttgcaatgatt 31116288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 32490812 - 32490766
Alignment:
Q  55 agagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||||||||||||| |   |||||||||||||||||||||||||||    
T  32490812 agagctttgttcatcaaatcaaggtaagggtgagactaactctcaat 32490766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 11848169 - 11848112
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| | |||||||||||    
T  11848169 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 11848112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 15747556 - 15747604
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaa--tatataactt 119  Q
    ||||||||||||||||||||||||||||| ||| |||  ||||||||||    
T  15747556 ctaaggtaagggtgagactaactctcaataattataaattatataactt 15747604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 9333501 - 9333564
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||| ||||||||| |||| || ||  |||||||||||||| ||||||||||||    
T  9333501 ggagaatctgattttcgtagagctt-gttcgtcaattcaaggtaagggtgaggctaactctcaat 9333564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 9387284 - 9387347
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||| ||||||||| |||| || ||  |||||||||||||| ||||||||||||    
T  9387284 ggagaatctgattttcgtagagctt-gttcgtcaattcaaggtaagggtgaggctaactctcaat 9387347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 14486713 - 14486661
Alignment:
Q  76 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaatt 128  Q
    ||||||||||||||||| |  ||||||||  |||||||||| |||||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 15069836 - 15069784
Alignment:
Q  49 ttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||| |||| |||||||||| |  ||||||||||||||||||| ||||||||    
T  15069836 ttttggagagttttgttcatcaaattaaggtaagggtgagactatctctcaat 15069784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 17143290 - 17143243
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaa--tatataactt 119  Q
    |||||||||||||||||||||||||||| ||| |||  ||||||||||    
T  17143290 taaggtaagggtgagactaactctcaataattataaattatataactt 17143243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 440 - 508
Target Start/End: Original strand, 23270343 - 23270411
Alignment:
Q  440 ttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgac 508  Q
    |||||||||||||  || | ||| | ||||| ||| |||| || |||||||||||||||||||||||||    
T  23270343 ttttgggtgaaaaggggttcaaacccgtaacattttttctgcataattttgaatggtcgcttaagcgac 23270411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 38979930 - 38979986
Alignment:
Q  50 tttgtagagctttgttcatc-gatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||||||||||||| ||  ||||||||||||||| ||||||  ||||||||    
T  38979930 tttgtagagctttgttcatctgaattaaggtaagggtgaggctaacttgcaatgatt 38979986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 432 - 508
Target Start/End: Original strand, 40885960 - 40886035
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgac 508  Q
    |||| ||||||| |||| |||| || || |||| ||||| ||| | || ||||||||||||||||||||||||||||    
T  40885960 attgggagttttaggtggaaaagggttggaaaccgtaacattt-tactgcagaattttgaatggtcgcttaagcgac 40886035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 49 - 559
Target Start/End: Original strand, 222180 - 222707
Alignment:
Q  49 ttttgtagagctttg-ttcatcgatctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttc 147  Q
    ||||||||||||||| |||||  || ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  222180 ttttgtagagctttgattcataaat-taaggtaagggtgaggctaactttcaatgattgtaatatataacttctgaaaattgatttaacatgaattgctc 222278  T
Q  148 ttgaaataggaattggggaattagggttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgtttt 247  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  222279 ttgaaataagaattgcggaattagggttctaatactgattttgagttgaaaagtgtaggagacatgttaattatgcttagaatcatgttcagatcgtttt 222378  T
Q  248 caggatttagtaacattgttgtaatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattg 347  Q
     ||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  222379 aaggatttagtaacattaatgtaataagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaaagagctgaattg 222478  T
Q  348 ttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattgtg---------- 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |              
T  222479 ttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacaatctttggaaacatgtttgggcattgggagatcaaaat 222578  T
Q  438 ----agttttgggtgaaaaatgggtgaaaactgtaacttttgttctccag-aattttgaatggtcgcttaagcgactctgcaagcgacgct---agttgc 529  Q
        |||||||||||||||| ||||| || ||||||| ||| |||| ||| ||||||||||||||||||||||||||||||||||||||||   |  |||    
T  222579 tggaagttttgggtgaaaaaggggtggaacctgtaacattt-ttctgcagaaattttgaatggtcgcttaagcgactctgcaagcgacgctgcaaagtgc 222677  T
Q  530 tgtctgatgaatgcacgcttaagcgagctg 559  Q
    |||||||||| |||||||||||||| ||||    
T  222678 tgtctgatgactgcacgcttaagcgtgctg 222707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 74 - 410
Target Start/End: Complemental strand, 46626017 - 46625682
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattaggg 173  Q
    |||| ||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattgatttaacatgaattgttcttggaataggaattgggggattaggg 46625918  T
Q  174 ttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaatc 273  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||||| ||||||||| |||||||    
T  46625917 ttctaatactgattttgagttgaaaagtgtaggagacatgttaattatgcttagaatcatgatcatatcgtttttaggattttgtaacattgctgtaatc 46625818  T
Q  274 agaattgggaaaggttgggagttgttggagagaa-tttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgtt 372  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  46625817 agaattgggaaaggttggga-ttgttggagagaattttgagagattatgcaag-ttgttggaatgagctgaattgttgttgttgatgcatgttttatgtt 46625720  T
Q  373 cctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  46625719 cctttagatgcctagttgtatattgaacctgtaaacat 46625682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 72 - 435
Target Start/End: Complemental strand, 14567260 - 14566899
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa--taggaattggggaatt 169  Q
    ||||||||||||||||| |||||  ||||||||| ||||||||   |||||||||||| || |  | |||||||||||||||  || |||||||| ||||    
T  14567260 tctaaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattgtttgatta-gaattgttcttgaaaaataagaattggg-aatt 14567163  T
Q  170 agggttctaatactgattttgagttgaaaagttta-ggagacatgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgtt 267  Q
    ||||||||| |||||||||||    ||||||  || |||  ||||||||||||||||||||| ||| ||||||||| ||| |||| ||| |||  |||||    
T  14567162 agggttcta-tactgattttgga--gaaaagagtaaggattcatgttaattatgcttagaattcatattcagatcgattttaggaatta-taatgttgtt 14567067  T
Q  268 gtaatcagaatt-gggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttt 366  Q
    |||||| ||||| |||| ||||| ||| |||||||||| || ||||| ||   |||||||||||  ||||||  ||||||||||||||||||||||||||    
T  14567066 gtaatccgaatttgggagaggttagga-ttgttggagaaaaattgagggaaattgcaagattgtgagaatgagatgaattgttgttgttgatgcatgttt 14566968  T
Q  367 tatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||||||||||||||    
T  14566967 tatgttcctttagatgcctaattgtataatgaacctgtaaacaatctttgaaaacatgtttgggcattg 14566899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 73 - 435
Target Start/End: Complemental strand, 148675 - 148315
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa--taggaattggggaatta 170  Q
    |||||||||||||||| |||||  ||||||||| ||||||||   |||||||||||| ||| |   |||||||||||||||  || |||||||| |||||    
T  148675 ctaaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattgttttgattagaattgttcttgaaaaataagaattggg-aatta 148577  T
Q  171 gggttctaatactgattttgagttgaaaagttta-ggagacatgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttg 268  Q
    |||||||| |||||||||||    ||||||  || |||  ||||||||||||||||||||| ||| ||||||||| ||| | || ||| |||  ||| ||    
T  148576 gggttcta-tactgattttgga--gaaaagagtaaggattcatgttaattatgcttagaattcatattcagatcgattttatgaatta-taatgttgctg 148481  T
Q  269 taatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgtttta 368  Q
    ||||| |||||  || ||||| ||| |||||||||| || ||||| ||   |||||||||||  ||||||  |||||||||| |||||||||||||||||    
T  148480 taatccgaatttcgagaggttagga-ttgttggagaaaaattgagggaaattgcaagattgtgagaatgagatgaattgttgctgttgatgcatgtttta 148382  T
Q  369 tgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||| ||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  148381 tgtttctttagatgtctaattgtataatgaacctataaacaatctttggaaacatgtttgggcattg 148315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 432 - 559
Target Start/End: Original strand, 16479376 - 16479503
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgctagttgctg 531  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  16479376 attgggagttttgggtgaaaaatgggtgaaacccgtaacttttgttctgcagaattttgaatggtcgcttaagcgacgctgcaaacgacgctagttgctg 16479475  T
Q  532 tctgatgaatgcacgcttaagcgagctg 559  Q
    ||||||||||||||||||||||| ||||    
T  16479476 tctgatgaatgcacgcttaagcgtgctg 16479503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 331 - 435
Target Start/End: Complemental strand, 15167977 - 15167872
Alignment:
Q  331 tggaatgaactg-aattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgg 429  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  15167977 tggaatgatctgtaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgg 15167878  T
Q  430 gcattg 435  Q
    ||||||    
T  15167877 gcattg 15167872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 331 - 435
Target Start/End: Complemental strand, 18873162 - 18873057
Alignment:
Q  331 tggaatgaactg-aattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgg 429  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  18873162 tggaatgatctgtaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgg 18873063  T
Q  430 gcattg 435  Q
    ||||||    
T  18873062 gcattg 18873057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 331 - 435
Target Start/End: Original strand, 10896044 - 10896149
Alignment:
Q  331 tggaatgaactg-aattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgg 429  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  10896044 tggaatgatctgtaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtataatgaacctataaacaatctttgaaaacatgtttgg 10896143  T
Q  430 gcattg 435  Q
    ||||||    
T  10896144 gcattg 10896149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 14422772 - 14422682
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  14422772 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatgatgaacctataaacaatctttggaaacatgtttgggcattg 14422682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 16009365 - 16009275
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  16009365 ttgttgttgttgatgcgtgttttatgttcctttaaatgcctaattgtataaagaacctataaacaatctttggaaacatgtttgggcattg 16009275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 306 - 411
Target Start/End: Complemental strand, 13664757 - 13664652
Alignment:
Q  306 aatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctata 405  Q
    |||| |||||||| || ||||||| | |||||| ||||||||||||||||||||| |||||| |||||||||||||||||| |||| |||||||||| ||    
T  13664757 aattggagagattttgtaagattgctagaatgatctgaattgttgttgttgatgcctgttttgtgttcctttagatgcctagttgtgtattgaacctgta 13664658  T
Q  406 aacatt 411  Q
    ||||||    
T  13664657 aacatt 13664652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 306 - 410
Target Start/End: Complemental strand, 13679320 - 13679216
Alignment:
Q  306 aatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctata 405  Q
    |||| |||||||| || ||||||  | |||||| ||||||||||||||||||||| |||||| |||||||||||||||||| || | |||||||||||||    
T  13679320 aattggagagattttgtaagatttatagaatgatctgaattgttgttgttgatgcctgttttgtgttcctttagatgcctagttatgtattgaacctata 13679221  T
Q  406 aacat 410  Q
    |||||    
T  13679220 aacat 13679216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 21230957 - 21231060
Alignment:
Q  71 atctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaatta 170  Q
    |||||||||||||||||||||| |||||||| ||  || ||||||| |||||||||||| ||||||||||||||||||||| |||  |||| ||||||||    
T  21230957 atctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgttttaacatgaattgttcttgagataaaaatt-gggaatta 21231055  T
Q  171 gggtt 175  Q
    |||||    
T  21231056 gggtt 21231060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 7530219 - 7530152
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    |||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  7530219 ggagaatctgatttttgtagagctttgttcatcaattcaaggtaagggtgagactaactctcaatgat 7530152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 48744617 - 48744553
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  48744617 ggagaatctgatttttgtagagctttgttcatcgattcaaggtaagggtgaggctaactctcaat 48744553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 13256781 - 13256712
Alignment:
Q  37 ggagaatcagatttttg-tagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||||||| ||||| ||| |||||| |||||||||||||||||| ||||||||||||||||    
T  13256781 ggagaatcagatttttggtagagttttattcatcaatctaaggtaagggtgaggctaactctcaatgatt 13256712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 16574330 - 16574266
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatg 102  Q
    ||||||||||||| | ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  16574330 ggagaatcagattct-gtagagctttgttcatcaatctaaggtaagggtgaggctaactctcaatg 16574266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 16591332 - 16591396
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatg 102  Q
    ||||||||||||| | ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  16591332 ggagaatcagattct-gtagagctttgttcatcaatctaaggtaagggtgaggctaactctcaatg 16591396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 11382871 - 11382947
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttg 150  Q
    ||||||||||||||||||| |||||||| ||  |||||||||| ||||||||||||  |||| ||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgtcttaatatgaattgttcttg 11382947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 13898559 - 13898495
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||||||||||||||||||||| || ||||||||||||||| |||||| |||||    
T  13898559 ggagaatctgatttttgtagagctttgttcatcaatttaaggtaagggtgaggctaactttcaat 13898495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 15214641 - 15214573
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||| ||||||||||||||| |||||||| ||  |||||||||||||| ||||||||||||||||    
T  15214641 ggagaatctgatttttgtagagctgtgttcatcaattcaaggtaagggtgaggctaactctcaatgatt 15214573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 41285118 - 41285064
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  41285118 ggagaatcagattct-gtagagctttgttcatcgatctaaggtaagggtgagacta 41285064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 140
Target Start/End: Complemental strand, 23556433 - 23556330
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgta--atatataacttctgaaaattgattta 134  Q
    ||||||||||||| | ||||||||||||||||| |||||||||||||||||| |||||| ||||| ||| ||   ||| ||| ||||| |||||||||||    
T  23556433 ggagaatcagattct-gtagagctttgttcatcaatctaaggtaagggtgaggctaactttcaataattatagtgtatgtaaattctg-aaattgattta 23556336  T
Q  135 acatga 140  Q
    ||||||    
T  23556335 acatga 23556330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 140
Target Start/End: Complemental strand, 23557622 - 23557519
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgta--atatataacttctgaaaattgattta 134  Q
    ||||||||||||| | ||||||||||||||||| |||||||||||||||||| |||||| ||||| ||| ||   ||| ||| ||||| |||||||||||    
T  23557622 ggagaatcagattat-gtagagctttgttcatcaatctaaggtaagggtgaggctaactttcaataattatagtgtatttaaattctg-aaattgattta 23557525  T
Q  135 acatga 140  Q
    ||||||    
T  23557524 acatga 23557519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 15727353 - 15727398
Alignment:
Q  60 tttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  15727353 tttgttcatcaatctaaggtaagggtgagactaactctcaatgatt 15727398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 8249213 - 8249277
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| ||||||||||||||||||||||||  |  |||||||||||||| ||||||||||||    
T  8249213 ggagaatctgatttttgtagagctttgttcatcagttcaaggtaagggtgaggctaactctcaat 8249277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 11389348 - 11389424
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttg 150  Q
    ||||||||||||||||||| |||||||| ||  |||||||||| ||||||||||||  |||| | ||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgtcttaatacgaattgttcttg 11389424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 15726406 - 15726350
Alignment:
Q  48 tttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    ||||||||||| ||||||| || |||||||||||||||||| |||||||||||||||    
T  15726406 tttttgtagagttttgttcttcaatctaaggtaagggtgaggctaactctcaatgat 15726350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 20311049 - 20311128
Alignment:
Q  71 atctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttg 150  Q
    |||||||||||||||||||||| |||||||| ||  |||  ||||| ||||||||||||   ||||||||||||||||||    
T  20311049 atctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattgtcgtaacatgaattgttcttg 20311128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 42042252 - 42042186
Alignment:
Q  38 gagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||| |||| || ||||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  42042252 gagaaccagaattatgtagagctttgttcttcaat-taaggtaagggtgagactaactctcaatgatt 42042186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 16250201 - 16250243
Alignment:
Q  53 gtagagctttgttcatcgatctaaggtaagggtgagactaact 95  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  16250201 gtagagctttgttcatcgatctaaggtaagggtgggactaact 16250243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 402
Target Start/End: Complemental strand, 16677093 - 16677024
Alignment:
Q  333 gaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacct 402  Q
    |||||| ||||||||||||||||||||| |||||    |||||||||||||||| |||||||| ||||||    
T  16677093 gaatgatctgaattgttgttgttgatgcctgtttgtgtttcctttagatgcctagttgtatatagaacct 16677024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 402
Target Start/End: Complemental strand, 17651329 - 17651260
Alignment:
Q  333 gaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacct 402  Q
    |||||| ||||||||||||||||||||| |||||    |||||||||||||||| |||||||| ||||||    
T  17651329 gaatgatctgaattgttgttgttgatgcctgtttgtgtttcctttagatgcctagttgtatatagaacct 17651260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 410
Target Start/End: Original strand, 21231216 - 21231293
Alignment:
Q  333 gaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||| ||||||||||||||||||||| || ||| |||||||||||||| ||| |||| ||| | |||| |||||||    
T  21231216 gaatgatctgaattgttgttgttgatgcctgatttgtgttcctttagatgtctagttgtgtataggacctgtaaacat 21231293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 409
Target Start/End: Complemental strand, 14230588 - 14230504
Alignment:
Q  325 gattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaaca 409  Q
    |||||||||||||  |||||||| ||||||| |||||| |||| ||||||||| |||||||| |||| ||| | |||| ||||||    
T  14230588 gattgttggaatgggctgaattgatgttgttaatgcatattttgtgttcctttcgatgcctagttgtgtataggacctgtaaaca 14230504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 39994818 - 39994886
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatct-aaggtaagggtgagactaactctcaatgat 104  Q
    |||||||| |||||||| ||||||||||||||| |  | ||||||| ||||||||||||||||||||||    
T  39994818 ggagaatctgatttttggagagctttgttcatcaaaatcaaggtaaaggtgagactaactctcaatgat 39994886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 432 - 515
Target Start/End: Original strand, 47481456 - 47481539
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaa-ttttgaatggtcgcttaagcgactctgcaa 515  Q
    |||| ||||||||||||||||| ||||| || | ||||| ||| |||| ||||| ||||||||||||||||||||||| ||||||    
T  47481456 attgggagttttgggtgaaaaaggggtggaacccgtaacattt-ttctgcagaaattttgaatggtcgcttaagcgacgctgcaa 47481539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 14188260 - 14188314
Alignment:
Q  39 agaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||||||| |||||    
T  14188260 agaatcagattct-gtagagttttgttcatcgatctaaggtaagggtgaggctaac 14188314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 14190858 - 14190912
Alignment:
Q  39 agaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||||||| |||||    
T  14190858 agaatcagattct-gtagagttttgttcatcgatctaaggtaagggtgaggctaac 14190912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 29005142 - 29005095
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctca 99  Q
    ||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  29005142 tgtagagatttgttcatcaatctaaggtaagggtgagactaacactca 29005095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 37726839 - 37726892
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    |||||||||||||||||||||||||||||||||| |  | ||||||||||||||    
T  37726839 tctaaggtaagggtgagactaactctcaatgattttagattatataacttctga 37726892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 12207673 - 12207722
Alignment:
Q  55 agagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    ||||||||||||||| |   ||||||||||||||||||||||||||||||    
T  12207673 agagctttgttcatcaaatcaaggtaagggtgagactaactctcaatgat 12207722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 14423040 - 14422983
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  14423040 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 14422983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 34958614 - 34958562
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaa--tatataacttctga 123  Q
    ||||||||||||||||||||||||||||| ||| |||  ||||||||||||||    
T  34958614 ctaaggtaagggtgagactaactctcaataattataaattatataacttctga 34958562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 831633 - 831699
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaa--tatataacttctgaaaattgatttaacat 138  Q
    ||||||||||||||||||||||||||||| ||| |||  |||||||||||| ||  ||||||||||||    
T  831633 ctaaggtaagggtgagactaactctcaataattataaattatataacttct-aattttgatttaacat 831699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 1196813 - 1196879
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaa--tatataacttctgaaaattgatttaacat 138  Q
    ||||||||||||||||||||||||||||| ||| |||  |||||||||||| ||  ||||||||||||    
T  1196813 ctaaggtaagggtgagactaactctcaataattataaattatataacttct-aattttgatttaacat 1196879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 16009631 - 16009575
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 16009575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 16107819 - 16107879
Alignment:
Q  35 gaggagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||| ||||||||||| ||||||| ||||||| || ||| ||||||||||||||||||||    
T  16107819 gaggataatcagattttctgtagagttttgttcttcaatcaaaggtaagggtgagactaac 16107879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 12201068 - 12201115
Alignment:
Q  55 agagctttgttcatcgatctaaggtaagggtgagactaactctcaatg 102  Q
    ||||||||||||||| |   ||||||||||||||||||||||||||||    
T  12201068 agagctttgttcatcaaatcaaggtaagggtgagactaactctcaatg 12201115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 432 - 515
Target Start/End: Complemental strand, 13320852 - 13320770
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaa 515  Q
    |||| ||||||||||||||||| ||||  || | ||||| ||| | ||  ||||||||||||||||||||||||||| ||||||    
T  13320852 attgggagttttgggtgaaaaaggggtagaacccgtaacattt-tgctgtagaattttgaatggtcgcttaagcgacgctgcaa 13320770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 31155450 - 31155396
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaa 126  Q
    ||||||||||||||| || || || ||||||||| |||||||||| |||||||||    
T  31155450 tctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 31155396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 13679548 - 13679491
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgat 131  Q
    ||||||||||||||||||| || ||||||||  | |||||||| || |||||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgat 13679491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 8777295 - 8777243
Alignment:
Q  43 tcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaact 95  Q
    ||||||||||||  ||| || |||||| |||||||||||||||||| ||||||    
T  8777295 tcagatttttgttaagcattattcatcaatctaaggtaagggtgaggctaact 8777243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 12590643 - 12590695
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaa 125  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| ||||||||    
T  12590643 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 12590695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 13007487 - 13007435
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaa 125  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| ||||||||    
T  13007487 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 13007435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 13893520 - 13893480
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    ||||||| |||||||||| |||||||||||||||| |||||    
T  13893520 tgtagagttttgttcatcaatctaaggtaagggtgggacta 13893480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 14319628 - 14319684
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaatt 128  Q
    ||||||||||||||| || || || ||||||||| |||| ||||| |||||||||||    
T  14319628 tctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaatt 14319684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 409
Target Start/End: Original strand, 14319878 - 14319962
Alignment:
Q  325 gattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaaca 409  Q
    |||||||||||||   ||||||| ||||||| |  ||| |||| ||||||||| |||| |||||||| ||| |||||| ||||||    
T  14319878 gattgttggaatgggttgaattgatgttgttaacacatattttgtgttcctttcgatgtctaattgtgtatagaacctgtaaaca 14319962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 15168230 - 15168174
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||| ||||| || ||  |||| ||||| |||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 15168174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 253; Significance: 1e-140; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 74 - 410
Target Start/End: Complemental strand, 24661632 - 24661298
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattaggg 173  Q
    ||||||||||||||| ||||||||| |||||  |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattgatttaacatgaat-gttcttgaaataggaattggggaattaggg 24661534  T
Q  174 ttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaatc 273  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||| ||||||  ||||||||| |||||||    
T  24661533 ttctaatactgattttgagttgaaaggtgtaggagacatgttaattatgcttagaatcatgttcagatcatttttaggattctgtaacattgctgtaatc 24661434  T
Q  274 agaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttc 373  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24661433 agaattgggaaaggttggga-atgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgtatgttttatgttc 24661335  T
Q  374 ctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||||| |||| ||||||||||||||| |||||||    
T  24661334 ctttagatacctagttgtatattgaacctgtaaacat 24661298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 73 - 435
Target Start/End: Original strand, 6260171 - 6260533
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa--taggaattggggaatta 170  Q
    |||||||||||||||| |||||  |||| |||| ||||||||   |||||||||||| ||| |   |||||||||||||||  || ||||| ||||||||    
T  6260171 ctaaggtaagggtgaggctaaccttcaacgattataatatatggtttctgaaaattgttttgattagaattgttcttgaaaaataagaatttgggaatta 6260270  T
Q  171 gggttctaatactgattttgagttgaaaagttta-ggagacatgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttg 268  Q
    |||||||| ||||||||||| |  ||||||  || |||  ||||||||||||||||||||| ||| ||||||| | ||| |||| ||| |||  ||| ||    
T  6260271 gggttcta-tactgattttg-gaagaaaagagtaaggattcatgttaattatgcttagaattcatattcagattgattttaggaatta-taatgttgctg 6260367  T
Q  269 taatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgtttta 368  Q
    ||||| |||||  || ||||| ||| |||||||||  || ||| | ||   |||||||||||  ||||||  ||||||||||||||||||||||||||||    
T  6260368 taatccgaatttagagaggttagga-ttgttggaggaaaattgggggaaattgcaagattgtgagaatgagatgaattgttgttgttgatgcatgtttta 6260466  T
Q  369 tgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6260467 tgttcctttagatgcctaattgtatattgaacctataaacaatctttggaaacatgtttgggcattg 6260533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 74 - 435
Target Start/End: Complemental strand, 9243016 - 9242657
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa--taggaattggggaattag 171  Q
    ||||||||||||||| |||||  ||||||||| ||||||||   |||||||||||| ||| |   |||||||||||||||  || |||||||| ||||||    
T  9243016 taaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattgttttgattagaattgttcttgaaaaataagaattggg-aattag 9242918  T
Q  172 ggttctaatactgattttgagttgaaaagttta-ggagacatgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttgt 269  Q
    ||||||| |||| |||||| |  ||||||  || |||  ||||||||||||||||||||| ||| ||||||||| ||| |||| ||| |||  ||| |||    
T  9242917 ggttcta-tactaattttg-gaagaaaagagtaaggattcatgttaattatgcttagaattcatattcagatcgattttaggaatta-taatgttgctgt 9242821  T
Q  270 aatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttat 369  Q
    ||||  |||| ||| ||||| ||| |||||||||| || ||| | ||   |||||||||||  ||||||  |||||||||||||||||||||||||||||    
T  9242820 aatccaaatttggagaggttagga-ttgttggagaaaaattgggggaaattgcaagattgtgagaatgagatgaattgttgttgttgatgcatgttttat 9242722  T
Q  370 gttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  9242721 gttcctt-agatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgggcattg 9242657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 345 - 435
Target Start/End: Original strand, 19661720 - 19661810
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  19661720 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgggcattg 19661810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 6483506 - 6483416
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| | |||||||||||||||||||||||    
T  6483506 ttgttgttgttgatgcatgttttatgttcctttagatgtctaattgtataatgaacctataaacaatatttggaaacatgtttgggcattg 6483416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 6486973 - 6486883
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| | |||||||||||||||||||||||    
T  6486973 ttgttgttgttgatgcatgttttatgttcctttagatgtctaattgtataatgaacctataaacaatatttggaaacatgtttgggcattg 6486883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 432 - 511
Target Start/End: Original strand, 7508270 - 7508349
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactct 511  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||    
T  7508270 attgggagttttgggtgaaaaatgggtgaaacccgtaacttttgttctgcagaattttgaatggtcgcttaagcgactct 7508349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 10039024 - 10039092
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||| |||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||    
T  10039024 ggagaatctgatttttgtagagctttgttcatcaattcaaggtaagggtgaggctaactctcaatgatt 10039092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 323 - 410
Target Start/End: Complemental strand, 23063494 - 23063407
Alignment:
Q  323 aagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    ||||||| | |||||| ||||||||||||||||||||| |||||| |||||||||||||||||| ||   |||||||||| |||||||    
T  23063494 aagattgctagaatgatctgaattgttgttgttgatgcctgttttgtgttcctttagatgcctagttaagtattgaacctgtaaacat 23063407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 24161366 - 24161299
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    |||||||  |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  24161366 ggagaatttgatttttgtagagctttgttcatcaattcaaggtaagggtgagactaactctcaatgat 24161299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 24272995 - 24273061
Alignment:
Q  35 gaggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||||| |||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||    
T  24272995 gaggagaatctgatttttgtagagctttgttcatcaattcaaggtaagggtgaggctaactctcaat 24273061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 21245769 - 21245705
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||    
T  21245769 ggagaatctgatttttgtagagctttgttcatcaattcaaggtaagggtgaggctaactctcaat 21245705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 23375991 - 23375940
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatga 103  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  23375991 tgtagagctttgttcatcgatctaaggtaagggtgaggctaactttcaatga 23375940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 37380593 - 37380539
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  37380593 ggagaatcagattct-gtagagctttgttcatcgatctaaggtaagggtgagacta 37380539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 19802445 - 19802354
Alignment:
Q  35 gaggagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgtaa--tatataacttctga 123  Q
    ||||||||||||||||| | ||||| ||||||| || ||| ||||||||||||||||||||||||||| ||| |||  |||| |||||||||    
T  19802445 gaggagaatcagattttctctagagttttgttcttcaatcaaaggtaagggtgagactaactctcaataattataaattatagaacttctga 19802354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 23265197 - 23265119
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa 153  Q
    ||||||||||||||||||| |||||||| ||  || ||||||| |||||||||||||| |||  ||||||||||||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaa-ttgaattgttcttgaaa 23265119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 23280265 - 23280187
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa 153  Q
    ||||||||||||||||||| |||||||| ||  || ||||||| |||||||||||||| |||  ||||||||||||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaa-ttgaattgttcttgaaa 23280187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 6477200 - 6477257
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    |||||||| |||||||||||||||||||||||| ||  |||||||||||||| |||||    
T  6477200 ggagaatctgatttttgtagagctttgttcatcaattcaaggtaagggtgaggctaac 6477257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 432 - 515
Target Start/End: Original strand, 25265815 - 25265899
Alignment:
Q  432 attgtgagttttgggtgaaaaatggg-tgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaa 515  Q
    |||| ||||||||| ||||||| ||| ||||| | ||||| ||| |||| ||||||||||||||||| |||||||||| ||||||    
T  25265815 attgagagttttggatgaaaaaaggggtgaaacccgtaacattttttctacagaattttgaatggtcacttaagcgacactgcaa 25265899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 25652312 - 25652244
Alignment:
Q  37 ggagaatcagatttttg-tagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    |||||||| |||||||| |||||||||||||||| |   |||||||||||| |||||||||||||||||    
T  25652312 ggagaatctgatttttggtagagctttgttcatcaaatcaaggtaagggtgggactaactctcaatgat 25652244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 26904489 - 26904425
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||||||||||||||||||||  ||  |||||||||||||  ||||||||||||    
T  26904489 ggagaatctgatttttgtagagctttgttcataaattcaaggtaagggtgatgctaactctcaat 26904425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 21908414 - 21908357
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgat 131  Q
    ||||||||||||||||||| |||||||| ||  | |||||||| ||||||||||||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgat 21908357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 23086474 - 23086421
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||| ||||||| |  |||||||||||||||||| ||||||||||||||||    
T  23086474 tgtagagttttgttctttaatctaaggtaagggtgaggctaactctcaatgatt 23086421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 6483772 - 6483716
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 6483716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 6487239 - 6487183
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 6487183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 7508223 - 7508259
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||| |||||||||||||||||||||||||    
T  7508223 acctataaacaatctttggaaacatgtttgggcattg 7508259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 26583630 - 26583551
Alignment:
Q  331 tggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||||| ||| ||||||||||||||||  |||||    |||||||||||||||| |||| ||| |||||| |||||||    
T  26583630 tggaatgatctgtattgttgttgttgatgtctgtttgtgtttcctttagatgcctagttgtgtatagaacctgtaaacat 26583551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 515
Target Start/End: Original strand, 36982875 - 36982949
Alignment:
Q  440 ttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaa 515  Q
    |||||||||||||  || | ||||| ||||| ||| |||| |||||||| ||||||||||||||||||| ||||||    
T  36982875 ttttgggtgaaaaggggttcaaaaccgtaacattt-ttctacagaatttggaatggtcgcttaagcgacgctgcaa 36982949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 410
Target Start/End: Complemental strand, 21908156 - 21908079
Alignment:
Q  333 gaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||| ||||||| ||| |||| |||| | |||| |||||||||||||||||| |||| ||||| | || |||||||    
T  21908156 gaatgatctgaatttttgctgttaatgcctattttgtgttcctttagatgcctagttgtgtattggaactgtaaacat 21908079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 23338358 - 23338424
Alignment:
Q  38 gagaatcagatttttgtagagctttgttcatc-gatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||||||  ||||||||||||||||| ||  ||||||||||||||| ||||||  ||||||||    
T  23338358 gagaatcagattt--gtagagctttgttcatctgaattaaggtaagggtgaggctaacttgcaatgatt 23338424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 22110622 - 22110559
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||| | |||||| ||||||||| ||||||| ||  |||||||||||||| ||||||||||||    
T  22110622 ggagaaactgattttcgtagagctt-gttcatcaattcaaggtaagggtgaggctaactctcaat 22110559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 25265768 - 25265804
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||| | |||||||||||||||||||||||    
T  25265768 acctataaacaatatttggaaacatgtttgggcattg 25265804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 26583882 - 26583830
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaa 125  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| ||||||||    
T  26583882 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 26583830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 27207718 - 27207774
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaatt 128  Q
    ||||||||||||||| || || || ||||||||| |||| ||||| |||||||||||    
T  27207718 tctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaatt 27207774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 212; Significance: 1e-116; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 74 - 345
Target Start/End: Complemental strand, 12352 - 12082
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattaggg 173  Q
    ||||||||||||||| |||||||||||||||  |||||||||| |||||||||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattgattccacatgaattgttcttgaaatacgaattggggaattaggg 12253  T
Q  174 ttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaatc 273  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| |||||||    
T  12252 ttctaatactgattttgagttgaaaagtgtaggagacatgttaattatgcttagaatcatgttcagattgtttttaggatttggtaacattgctgtaatc 12153  T
Q  274 agaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaat 345  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12152 agaattgggaaaggttggga-ttgttggagagaatttgagagattatgcaagattgttggaatgagctgaat 12082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 1601 - 1539
Alignment:
Q  348 ttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||| |||||||    
T  1601 ttgttgttgctgcatgctttatgttcctttagatgcctagttgtatattgaacctgtaaacat 1539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 504
Target Start/End: Original strand, 22824 - 22888
Alignment:
Q  439 gttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaag 504  Q
    ||||||||||||||| || ||||| | ||||| ||| |||| ||||||| ||||||||||||||||    
T  22824 gttttgggtgaaaaagggttgaaacccgtaacattt-ttctgcagaattatgaatggtcgcttaag 22888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 38 - 419
Target Start/End: Complemental strand, 21931788 - 21931411
Alignment:
Q  38 gagaatcagatttttgtagagctttgttcatc-gatctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaac 136  Q
    ||||| ||||||||||||| | ||| |||||| ||  ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  21931788 gagaaccagatttttgtagggtttt-ttcatctgaattaaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattgatttaac 21931690  T
Q  137 atgaattgttcttgaaataggaattggggaattagggttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgtt 236  Q
    |||||||| ||||||||||||||||   |||||||||||||| ||  ||||||||   ||||||| |||||| |||||||||||| ||||| ||| ||||    
T  21931689 atgaattgatcttgaaataggaatt-aagaattagggttctattatcgattttgaaaggaaaagtgtaggagtcatgttaattatacttag-atcgtgtt 21931592  T
Q  237 cagatcgttttcaggatttagtaacattgttgtaatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaat 336  Q
    ||||||| ||| |||||||  |||| ||| |||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||||| ||||||||    
T  21931591 cagatcgattttaggattttataacgttgctgtaatcagaattggggaaggttggga-ttgttggaga-aatttgagagattttgcaagatcgttggaat 21931494  T
Q  337 gaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaa 419  Q
    || |||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||| |||||||  |||||||    
T  21931493 gagctgaattgttgttgttgatgcatgttttgtgttcctttagatgccttgctgtatattgaacctgtaaacatcttttggaa 21931411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 165 - 419
Target Start/End: Complemental strand, 21840366 - 21840115
Alignment:
Q  165 gaattagggttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacatt 264  Q
    |||||||||||||| |||  |||||||   ||||||  |||||| |||||||||||| |||||| |||||||||||||  ||| |||||||  |||| ||    
T  21840366 gaattagggttctattaccaattttgaaaggaaaaggataggagtcatgttaattatacttaga-tcatgttcagatcaattttaggattttataacgtt 21840268  T
Q  265 gttgtaatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgt 364  Q
    | |||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||    
T  21840267 gctgtaatcagaattggggaaggttggga-ttgttggaga-aatttgagagattttgcaagatcgttggaatgagctgaattgttgttgttgatgcatgt 21840170  T
Q  365 tttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaa 419  Q
    ||| |||||||||||||||||   |||||||||||||| |||||||  |||||||    
T  21840169 tttgtgttcctttagatgccttgctgtatattgaacctgtaaacatcttttggaa 21840115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 74 - 420
Target Start/End: Complemental strand, 19750605 - 19750263
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttg-aaataggaattggggaattagg 172  Q
    ||||||||||||||| |||||  ||||||| | |||||||| | ||||||||||| |||| |||||||||||||||| |||||  ||||| | |||||||    
T  19750605 taaggtaagggtgaggctaaccttcaatgactataatatatgatttctgaaaattaattttacatgaattgttcttggaaataaaaattgag-aattagg 19750507  T
Q  173 gttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaat 272  Q
    |||||| ||| ||||||||   ||||||| |||||  ||||||||||||| |||||| | ||||||||||| ||| |||||   |||| |||||||||||    
T  19750506 gttcta-taccgattttgaaa-gaaaagtataggaatcatgttaattatgtttagaaacctgttcagatcgattttaggatgctgtaaaattgttgtaat 19750409  T
Q  273 cagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgtt 372  Q
    |||||||||||||| ||  |  ||||||||||  |||||||||| | | ||||| ||||||||| |  ||||||||||| ||||||||||||||| ||||    
T  19750408 cagaattgggaaagatttaggattgttggaga--atttgagagaatttacaagagtgttggaataagatgaattgttgtagttgatgcatgttttgtgtt 19750311  T
Q  373 cctttagatgcctaattgtatattgaacctataaacattctttggaaa 420  Q
    ||||||||||||| ||| ||||  |||||| |||||||| | ||||||    
T  19750310 cctttagatgccttattatatacagaacctgtaaacattttctggaaa 19750263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 432 - 559
Target Start/End: Original strand, 6774671 - 6774798
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgctagttgctg 531  Q
    |||| |||||||||||||||||||||||||| | |||||||||||| | |||||||||||||||| ||||||||||||||||||||||| ||||||| ||    
T  6774671 attgggagttttgggtgaaaaatgggtgaaacccgtaacttttgttatgcagaattttgaatggttgcttaagcgactctgcaagcgacactagttgttg 6774770  T
Q  532 tctgatgaatgcacgcttaagcgagctg 559  Q
    ||||||||||||||||||||||| ||||    
T  6774771 tctgatgaatgcacgcttaagcgtgctg 6774798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 331 - 435
Target Start/End: Original strand, 8727986 - 8728091
Alignment:
Q  331 tggaatgaactg-aattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgg 429  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  8727986 tggaatgatctgtaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgg 8728085  T
Q  430 gcattg 435  Q
    ||||||    
T  8728086 gcattg 8728091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 44477411 - 44477321
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| | |||||||||||||||||||||||    
T  44477411 ttgttgttgttgatgcatgttttatgttcctttagatgtctaattgtataatgaacctataaacaatatttggaaacatgtttgggcattg 44477321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 44492569 - 44492479
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| | |||||||||||||||||||||||    
T  44492569 ttgttgttgttgatgcatgttttatgttcctttagatgtctaattgtataatgaacctataaacaatatttggaaacatgtttgggcattg 44492479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 432 - 559
Target Start/End: Complemental strand, 24548820 - 24548705
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgctagttgctg 531  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||            |||||||||||||||    
T  24548820 attgggagttttgggtgaaaaatgggtgaaacccgtaacttttgttctgcagaattttgaatggtcgcttaag------------cgacgctagttgctg 24548733  T
Q  532 tctgatgaatgcacgcttaagcgagctg 559  Q
    ||||||||||||||||||||||| ||||    
T  24548732 tctgatgaatgcacgcttaagcgtgctg 24548705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 14056561 - 14056664
Alignment:
Q  71 atctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaatta 170  Q
    |||||||||||||||||||||| |||||||| ||  || ||| ||| |||||||||||| ||||||||||||||||||||| |||  ||||||| |||||    
T  14056561 atctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg-tttaacatgaattgttcttgagataaaaattgggaaatta 14056659  T
Q  171 gggtt 175  Q
    |||||    
T  14056660 gggtt 14056664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 25112034 - 25111931
Alignment:
Q  71 atctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaatta 170  Q
    |||||||||||||||||||||| |||||||| ||  || ||| ||| |||||||||||| ||||||||||||||||||||| |||  ||||||| |||||    
T  25112034 atctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg-tttaacatgaattgttcttgagataaaaattgggaaatta 25111936  T
Q  171 gggtt 175  Q
    |||||    
T  25111935 gggtt 25111931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 14056811 - 14056896
Alignment:
Q  325 gattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    ||||||| |||||| ||||||||||||||||||||| |||||| |||||||||||||||||| |||| ||| | |||| |||||||    
T  14056811 gattgttagaatgatctgaattgttgttgttgatgcctgttttgtgttcctttagatgcctagttgtgtataggacctgtaaacat 14056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 25111784 - 25111699
Alignment:
Q  325 gattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| || |||| ||| | |||| |||||||    
T  25111784 gattgttggaatgatctgaattgttgttgttgatgcctgttttgtgttcctttagatgcatagttgtgtataggacctgtaaacat 25111699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 21860494 - 21860585
Alignment:
Q  35 gaggagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    ||||||||||||||||| ||||||| ||||||| || ||| ||||||||||||||||||||||||||||||| |  | ||||||||||||||    
T  21860494 gaggagaatcagattttctgtagagttttgttcttcaatcaaaggtaagggtgagactaactctcaatgattatagattatataacttctga 21860585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 340 - 411
Target Start/End: Original strand, 29643649 - 29643720
Alignment:
Q  340 ctgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacatt 411  Q
    |||||||||||||| |||||| |||||||||||||||| |||||||| |||| |||||||||| ||||||||    
T  29643649 ctgaattgttgttgatgatgcctgttttatgttccttttgatgcctagttgtgtattgaacctgtaaacatt 29643720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 8413713 - 8413769
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  8413713 ggagaatcagattct-gtagagctttgttcatcgatctaaggtaagggtgagactaac 8413769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 11775801 - 11775745
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  11775801 ggagaatcagattct-gtagagctttgttcatcgatctaaggtaagggtgagactaac 11775745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 18023441 - 18023497
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  18023441 ggagaatcagattat-gtagagctttgttcatcgatctaaggtaagggtgagactaac 18023497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 410
Target Start/End: Complemental strand, 18614099 - 18613995
Alignment:
Q  306 aatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctata 405  Q
    |||| |||||||| || ||||||| | |||||| ||||||||||||||||||||| |||||| | ||||||||| || ||| |||| |||| ||||| ||    
T  18614099 aattggagagattttgtaagattgctagaatgatctgaattgttgttgttgatgcctgttttgtattcctttaggtgtctagttgtgtattaaacctgta 18614000  T
Q  406 aacat 410  Q
    |||||    
T  18613999 aacat 18613995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 20387572 - 20387509
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||||||||||| | ||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  20387572 ggagaatcagattct-gtagagctttgttcatcaatctaaggtaagggtgaggctaactctcaat 20387509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 22433579 - 22433646
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||| | |||||| |||||||||| |||||||||||||||||| ||||||||||||||||    
T  22433579 ggagaatcagattct-gtagagttttgttcatcaatctaaggtaagggtgaggctaactctcaatgatt 22433646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 42559434 - 42559486
Alignment:
Q  53 gtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  42559434 gtagagctttgttcatcaatctaaggtaagggtgaggctaactctcaatgatt 42559486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 15635069 - 15635146
Alignment:
Q  48 tttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    |||||||||||||||||||||| ||  ||||||||||||| ||||||||||||||||| |  | ||||||||||||||    
T  15635069 tttttgtagagctttgttcatcaattcaaggtaagggtgatactaactctcaatgattttagattatataacttctga 15635146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 20494315 - 20494381
Alignment:
Q  39 agaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||| |||||||||||||| ||||||||| ||  |||||||||||||| ||||||||||||||||    
T  20494315 agaatctgatttttgtagagcgttgttcatcaattcaaggtaagggtgaggctaactctcaatgatt 20494381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 22617722 - 22617655
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    |||||||| |||||||| | ||||||||||||| |   ||||||||||||||||||||||||||||||    
T  22617722 ggagaatctgatttttgaaaagctttgttcatcaaatcaaggtaagggtgagactaactctcaatgat 22617655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 23482053 - 23482131
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa 153  Q
    ||||||||||||||||||| |||||||| ||  || ||||||| |||||||||||||| |||  ||||||||||||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaa-ttgaattgttcttgaaa 23482131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 19883035 - 19882979
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||||||||| |||||    
T  19883035 ggagaatcagattct-gtagagttttgttcatcgatctaaggtaagggtgaggctaac 19882979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 6774624 - 6774660
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||||||||||||||    
T  6774624 acctataaacattctttggaaacatgtttgggcattg 6774660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 22815558 - 22815622
Alignment:
Q  35 gaggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctca 99  Q
    ||||||||| ||||||| |||||| ||  |||||| |||||||||||||||||| ||||||||||    
T  22815558 gaggagaattagattttggtagagtttgattcatcaatctaaggtaagggtgaggctaactctca 22815622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 34951498 - 34951458
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  34951498 tgtagagctttgttcatcaatctaaggtaagggtgagacta 34951458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 18614327 - 18614250
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaa 152  Q
    ||||||||||||||||||| |||||||| ||  | |||||||| ||||||||||||||  ||  |||||||||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaa-ttgaattgttcttgaa 18614250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 25657478 - 25657535
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaact 95  Q
    ||||||||||||| | |||||||||||||||||||||||| ||||||||| || |||||    
T  25657478 ggagaatcagattct-gtagagctttgttcatcgatctaaagtaagggtgggagtaact 25657535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 44477679 - 44477621
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  44477679 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 44477621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 44492837 - 44492779
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  44492837 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 44492779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 175
Target Start/End: Original strand, 27940851 - 27940953
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttg--aaataggaattggggaatta 170  Q
    |||||||||||||||| |||||  ||||||||| |||||||| | |||||||||||| ||| |   ||||||||||||  ||||| ||||| ||||||||    
T  27940851 ctaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg-tttgattagaattgttcttgaaaaataagaatt-gggaatta 27940948  T
Q  171 gggtt 175  Q
    |||||    
T  27940949 gggtt 27940953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 15003066 - 15003129
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||| ||||||||| ||||||| ||  |||||||| ||||||||||||||||||    
T  15003066 ggagaatctgattttcgtagagctt-gttcatcaattcaaggtaagagtgagactaactctcaat 15003129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 17345455 - 17345419
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||| |||||||||||||||||||||||||    
T  17345455 acctataaacaatctttggaaacatgtttgggcattg 17345419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 22005055 - 22005095
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  22005055 tgtagagctttgttcatcaatctaaggtaagggtgggacta 22005095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 24980200 - 24980136
Alignment:
Q  38 gagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||| |||||||| ||||||||||||||| || ||  |||||||||||||| ||||||||||||    
T  24980200 gagaaccagattttctgtagagctttgttcttcaattcaaggtaagggtgaggctaactctcaat 24980136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 36601438 - 36601395
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaa 81  Q
    ||||||||||||| | |||||||||||||||||||||||||||||    
T  36601438 ggagaatcagattct-gtagagctttgttcatcgatctaaggtaa 36601395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 38184696 - 38184747
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaa--tatataacttctga 123  Q
    |||||||||||||||||||||||||||| ||| |||  ||||||||||||||    
T  38184696 taaggtaagggtgagactaactctcaataattataaattatataacttctga 38184747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 44522157 - 44522197
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  44522157 tgtagagctttgttcatcaatctaaggtaagggtgggacta 44522197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 430
Target Start/End: Complemental strand, 24548867 - 24548836
Alignment:
Q  399 acctataaacattctttggaaacatgtttggg 430  Q
    ||||||||||||||||||||||||||||||||    
T  24548867 acctataaacattctttggaaacatgtttggg 24548836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 9404867 - 9404929
Alignment:
Q  43 tcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||  ||| || |||||| |||||||||||||||||| ||||||  ||||||||    
T  9404867 tcagatttttgttaagcattattcatcaatctaaggtaagggtgaggctaacttgcaatgatt 9404929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 11250761 - 11250795
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtg 86  Q
    |||||||||||||||||| ||||||||||||||||    
T  11250761 tgtagagctttgttcatcaatctaaggtaagggtg 11250795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 364913 - 364884
Alignment:
Q  76 aggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||||||||||||||||||||    
T  364913 aggtaagggtgagactaactctcaatgatt 364884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 21325764 - 21325797
Alignment:
Q  71 atctaaggtaagggtgagactaactctcaatgat 104  Q
    |||||||||||||||||| |||||||||||||||    
T  21325764 atctaaggtaagggtgaggctaactctcaatgat 21325797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 28854902 - 28854836
Alignment:
Q  38 gagaatcagatttttgtagagctttgttcatc-gatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||||||  ||||||||||||||||| ||  ||||||||||||||| ||||||  ||||||||    
T  28854902 gagaatcagattt--gtagagctttgttcatctgaattaaggtaagggtgaggctaacttgcaatgatt 28854836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 39364975 - 39364918
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgat 131  Q
    ||||||||||||||||||| |||||||| ||  || |||| || ||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattgat 39364918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 21330898 - 21330858
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    ||||||||||| |||||| |||||||||||||||| |||||    
T  21330898 tgtagagctttattcatcaatctaaggtaagggtgggacta 21330858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 21966679 - 21966719
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    |||||||||||||||||| || ||||||||||||| |||||    
T  21966679 tgtagagctttgttcatcaatgtaaggtaagggtgggacta 21966719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 21979445 - 21979485
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    |||||||||||||||||| ||||||||||| |||| |||||    
T  21979445 tgtagagctttgttcatcaatctaaggtaaaggtgggacta 21979485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 21999416 - 21999456
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    |||||||||||||||| | |||||||||||||||| |||||    
T  21999416 tgtagagctttgttcaccaatctaaggtaagggtgggacta 21999456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 45134078 - 45134130
Alignment:
Q  43 tcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaact 95  Q
    ||||||||||||  ||| || |||||| |||||||||||||||||| ||||||    
T  45134078 tcagatttttgttaagcattattcatcaatctaaggtaagggtgaggctaact 45134130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 183; Significance: 1e-98; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 184 - 410
Target Start/End: Original strand, 128766 - 128991
Alignment:
Q  184 gattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaatcagaattggga 283  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||||||||||||    
T  128766 gattttgagttgaaaagtgtaggagacatgttaattatgcttagaatcatgttcagatcgtttttaggattctgtaacattgctgtaatcagaattggga 128865  T
Q  284 aaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgc 383  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  128866 aaggttggga-ttgttggagagaatttgagagattatgcaagattgttggaatgagctgaattgttgttgttgatgtatgttttatgttcctttagatgc 128964  T
Q  384 ctaattgtatattgaacctataaacat 410  Q
    ||| ||||||||||||||| |||||||    
T  128965 ctagttgtatattgaacctgtaaacat 128991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 116951 - 116873
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa 153  Q
    ||||||||||||||||||| |||||||| ||  || ||||||| |||||||||||||| |||  ||||||||||||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaa-ttgaattgttcttgaaa 116873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 60511 - 60448
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||| ||||||||| ||||||| ||  |||||||||||||||||||||||||||    
T  60511 ggagaatctgattttcgtagagctt-gttcatcaattcaaggtaagggtgagactaactctcaat 60448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 177; Significance: 4e-95; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 74 - 410
Target Start/End: Complemental strand, 132834 - 132501
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattaggg 173  Q
    ||||||||||||||| |||||||||||||||| ||||||||||  |||||||||||| ||||||||||||||||||||||||||||||| | ||||||||    
T  132834 taaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaattgagttaacatgaattgttcttgaaataggaattgag-aattaggg 132736  T
Q  174 ttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaatc 273  Q
    ||||| ||||| |||  ||   |||||| |||||  |||||||||||||||||||||||||||||||||| ||| ||||| | |||||| || |||||||    
T  132735 ttctattactgttttgaagggaaaaagtgtaggaatcatgttaattatgcttagaatcatgttcagatcgattttaggatgttgtaacactgatgtaatc 132636  T
Q  274 agaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttc 373  Q
     |||||||||||| || ||| |||||||||| ||||||||||| | ||||||| ||||||||| | ||||||||||||||||||||||| |||| |||||    
T  132635 ggaattgggaaagattagga-ttgttggaga-aatttgagagaatttgcaagagtgttggaataagctgaattgttgttgttgatgcatattttgtgttc 132538  T
Q  374 ctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||||||||| |||||||| |||||||||||||||    
T  132537 ctttagatgccttattgtataatgaacctataaacat 132501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 74 - 419
Target Start/End: Complemental strand, 121958 - 121615
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattaggg 173  Q
    ||||||||||||||| |||||||||||||||| ||||||||||  |||||||||||| |||||||||||||||||||||||||||||| | |||||||||    
T  121958 taaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaattgagttaacatgaattgttcttgaaataggaatt-gagaattaggg 121860  T
Q  174 ttctaatactgattttg-agttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaat 272  Q
    ||||| ||||| ||||| ||   |||||| |||||  |||||||||||||||||||||||||||||||||| ||| |||||   ||||||||| ||||||    
T  121859 ttctattactgtttttgaagggaaaaagtgtaggaatcatgttaattatgcttagaatcatgttcagatcgattttaggatgctgtaacattgctgtaat 121760  T
Q  273 cagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgtt 372  Q
    | |||||||||||| || ||| |||||||||| ||||||||||| | ||||||| ||||||||| | |||||||||||||| ||||||||||||| ||||    
T  121759 cggaattgggaaagattagga-ttgttggaga-aatttgagagaatttgcaagagtgttggaataagctgaattgttgttgctgatgcatgttttgtgtt 121662  T
Q  373 cctttagatgcctaattgtatattgaacctataaacattctttggaa 419  Q
    ||||||||||||| |||||||| ||||||| |||||||  |||||||    
T  121661 cctttagatgccttattgtataatgaacctttaaacatcttttggaa 121615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 173; Significance: 1e-92; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 50 - 419
Target Start/End: Complemental strand, 7055 - 6685
Alignment:
Q  50 tttgtagagctttgttcatc-gatctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttct 148  Q
    ||||||||| |||||||||| ||  |||| |||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  7055 tttgtagag-tttgttcatctgaattaagataagggtgaggctaactctcaatgattataatatctaacttctgaaaattgatttaacatgaattgttct 6957  T
Q  149 tgaaataggaattggggaattagggttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttc 248  Q
    ||||||||||||| | |||||||||||||| ||| ||||||||   ||| ||| |||||  |||||||||||||||||||||| |||||| |||| |||     
T  6956 tgaaataggaatt-gagaattagggttctattaccgattttgaaaggaagagtgtaggaatcatgttaattatgcttagaatcgtgttcaaatcgatttt 6858  T
Q  249 aggatttagtaacattgttgtaatcagaa-ttgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaa--- 344  Q
    |||||||  |||| ||| ||||||||||| ||||| |||||||||| |||||||||| ||||||||||||| |||||||| |||||||||| |||||       
T  6857 aggattttataacgttgctgtaatcagaatttggggaaggttggga-ttgttggaga-aatttgagagattttgcaagatcgttggaatgagctgaattg 6760  T
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaa 419  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| | |||||||  |||||||    
T  6759 ttgttgttgttgatgtatgttttgtgttcctttagatgccttattgtatattgaacttgtaaacatcttttggaa 6685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 172; Significance: 4e-92; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 38 - 419
Target Start/End: Original strand, 2592 - 2969
Alignment:
Q  38 gagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaac 136  Q
    ||||| |||||||| ||||||||||| ||| || || ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  2592 gagaaccagattttgtgtagagctttattcttcaat-taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattgatttaac 2690  T
Q  137 atgaattgttcttg-aaataggaattggggaattagggttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgt 235  Q
    |||||||||||||| ||||| ||||| | ||||||||||||| |||| ||||||||  |||||||| |||||| |||||||||||||| ||| ||| |||    
T  2691 atgaattgttcttgaaaataagaatt-gagaattagggttct-ataccgattttgaaatgaaaagtgtaggagtcatgttaattatgcctag-atcgtgt 2787  T
Q  236 tcagatcgttttcaggatttagtaacattgttgtaatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaa 335  Q
    |||||||| ||| |||||||  |||| |||||||||||||||||||| ||| ||||||   |||||||| ||||||||||||  ||||||||||| ||||    
T  2788 tcagatcgattttaggattttataacgttgttgtaatcagaattggggaagattggga-cggttggaga-aatttgagagatattgcaagattgtgggaa 2885  T
Q  336 tgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaa 419  Q
    ||| |||||||||| ||||||||||||||||| |||||||||||||||||  ||| ||| ||||||| |||||||  |||||||    
T  2886 tgagctgaattgtttttgttgatgcatgttttgtgttcctttagatgccttgttgcataatgaacctgtaaacatcttttggaa 2969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 1882 - 1791
Alignment:
Q  35 gaggagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    ||||||| ||||||||| ||||||| ||| ||| || ||| ||||||||||||||||||||||||||||||| |  | ||||||||||||||    
T  1882 gaggagactcagattttctgtagagtttttttcttcaatcaaaggtaagggtgagactaactctcaatgattttagattatataacttctga 1791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 168; Significance: 1e-89; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 38 - 419
Target Start/End: Complemental strand, 824 - 447
Alignment:
Q  38 gagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaac 136  Q
    ||||| |||||||| |||||||||||  || || || ||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  824 gagaaccagattttatgtagagctttactcttcaat-taaggtaggggtgaggctaactctcaatgattataatatataacttctgaaaattgatttaac 726  T
Q  137 atgaattgttcttgaaa-taggaattggggaattagggttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaatcatgt 235  Q
    ||||||||||||||||| ||||||||| | | ||||| ||||| ||| ||||||||  |||||||| |||||| |||||||||||||| |||| || |||    
T  725 atgaattgttcttgaaaataggaattgag-agttaggattcta-tacagattttgaaatgaaaagtgtaggagtcatgttaattatgcctaga-tcgtgt 629  T
Q  236 tcagatcgttttcaggatttagtaacattgttgtaatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaa 335  Q
    |||||||| ||| |||||||  |||| |||||||||||| ||||||| ||| ||||||   |||||||| ||||||||||||| ||||||||||  ||||    
T  628 tcagatcgattttaggattttataacgttgttgtaatcataattggggaagattgggacg-gttggaga-aatttgagagattttgcaagattgcgggaa 531  T
Q  336 tgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaa 419  Q
    ||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| |||||||  |||||||    
T  530 tgagctgaattgttgttgttgatgcatgttttgtgttcctttagatgcctagttgtataatgaacctgtaaacatcttttggaa 447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 223 - 410
Target Start/End: Original strand, 18578 - 18764
Alignment:
Q  223 cttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgc 322  Q
    |||||||||||||||| || ||||| ||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18578 cttagaatcatgttcatatggtttttaggatttggtaacattgatgtaatcagaattgggaaaggttggga-ttgttggagagaatttgagagattatgc 18676  T
Q  323 aagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||| | |||||||    
T  18677 aagattgttggaatgagctgaattgttgttgatgatgaatgttttatgttcctttagatgcctagttgtatattgaacgtgtaaacat 18764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 123; Significance: 7e-63; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 74 - 435
Target Start/End: Original strand, 71343 - 71703
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa--taggaattggggaattag 171  Q
    |||||||||| |||| |||||  ||||||||| ||| |||| | |||| ||||||| ||| |   |||||||||||||||  || |||||||| ||||||    
T  71343 taaggtaaggatgaggctaaccttcaatgattataacatatgatttctaaaaattgttttgattcgaattgttcttgaaaaataagaattggg-aattag 71441  T
Q  172 ggttctaatactgattttgagttgaaaagttta-ggagacatgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttgt 269  Q
    ||||||| ||||||||||| |  ||||||  || |||  ||||||||||||||||||||| ||| ||||||||| ||| |||| ||| |||| |||||||    
T  71442 ggttcta-tactgattttg-gaagaaaagagtaaggattcatgttaattatgcttagaattcatattcagatcgattttaggaatta-taacgttgttgt 71538  T
Q  270 aatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttat 369  Q
    |||| ||||| ||| ||||| ||| |||||||||| || ||||| ||   |||||||||||  ||||||  |||||||||||||||||||||||||||||    
T  71539 aatccgaatttggagaggttagga-ttgttggagaaaaattgagggaaattgcaagattgtgagaatgagatgaattgttgttgttgatgcatgttttat 71637  T
Q  370 gttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||| |||||||| |||||||||    
T  71638 gttcctttagatgcctaattgtataatgaacctataaacaatctttgaaaacatgtatgggcattg 71703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 7e-63; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 74 - 435
Target Start/End: Complemental strand, 16373009 - 16372648
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa--taggaattggggaattag 171  Q
    ||||||||||||||| |||||  ||||||||| ||||||||   |||||||||||| ||| |   |||||||||||||||  || ||||| |||||||||    
T  16373009 taaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattgttttgattagaattgttcttgaaaaataagaatttgggaattag 16372910  T
Q  172 ggttctaatactgattttgagttgaaaagttta-ggagacatgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttgt 269  Q
    ||||||| ||||||||||| |  ||||||  || |||  ||||||||||||||||||||| ||| ||||||| | ||| |||| ||| |||  ||| |||    
T  16372909 ggttcta-tactgattttg-gaagaaaagagtaaggattcatgttaattatgcttagaattcatattcagattgattttaggaatta-taatgttgctgt 16372813  T
Q  270 aatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttat 369  Q
    |||| ||||| ||| ||||| ||| |||||||||  || ||| | ||   |||||||||||  ||||||  |||||||||||||||||||||||||||||    
T  16372812 aatccgaatttggagaggttagga-ttgttggaggaaaattgggggaaattgcaagattgtgagaatgagatgaattgttgttgttgatgcatgttttat 16372714  T
Q  370 gttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  16372713 gttcctttagatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgggcattg 16372648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 432 - 559
Target Start/End: Complemental strand, 41394059 - 41393932
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgctagttgctg 531  Q
    |||| |||||||||||||||||||||||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41394059 attgggagttttgggtgaaaaatgggtgaaacccgtaacttttgttatgcagaattttgaatggtcgcttaagcgactctgcaagtgacgctagttgctg 41393960  T
Q  532 tctgatgaatgcacgcttaagcgagctg 559  Q
    ||||||||||||||||||||||| ||||    
T  41393959 tctgatgaatgcacgcttaagcgtgctg 41393932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 333 - 435
Target Start/End: Complemental strand, 32651371 - 32651269
Alignment:
Q  333 gaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggca 432  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  32651371 gaatgatctgaattgttgttgttgatgcctgttttatgttcctttagatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgggca 32651272  T
Q  433 ttg 435  Q
    |||    
T  32651271 ttg 32651269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 74 - 410
Target Start/End: Complemental strand, 11158148 - 11157814
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgattt-aacatgaattgttcttgaaataggaattggggaattagg 172  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||||||||||| ||| |||||||||||||||||| ||    |||||| ||||| |    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattgtttttaacatgaattgttcttgagatgaagattggg-aattatg 11158050  T
Q  173 gttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttgtaa 271  Q
    ||||||   | ||||||||   ||||||| |||||  |||||| | | |||||||||| ||| ||||||| | || ||   ||||| ||  ||| || ||    
T  11158049 gttctaggcc-gattttgaaaggaaaagtgtaggaatcatgtttaatgtgcttagaattcatattcagattgattacaatgtttag-aatgttgctggaa 11157952  T
Q  272 tcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgt 371  Q
    ||||||||| || || || ||| ||||||||||||||| ||||| || |||||||||| | |||||| |||||||||||||||| || | |||||| |||    
T  11157951 tcagaattgagagagattaggaattgttggagagaatt-gagaggttttgcaagattgctagaatgatctgaattgttgttgttaatacctgttttgtgt 11157853  T
Q  372 tcctttagatgcctaattgtatattgaacctataaacat 410  Q
    ||||||||||||||| |||| |  ||||||| |||||||    
T  11157852 tcctttagatgcctagttgtgttctgaacctgtaaacat 11157814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 345 - 435
Target Start/End: Original strand, 20437291 - 20437381
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  20437291 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtataatgaacctataaacaatctttgaaaacatgtttgggcattg 20437381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 432 - 552
Target Start/End: Complemental strand, 45051280 - 45051172
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgctagttgctg 531  Q
    |||| |||||||||||||||||||||||||| | ||||||||||||||  |||||||||||||||||||||||            |||||||||||||||    
T  45051280 attgggagttttgggtgaaaaatgggtgaaacccgtaacttttgttctgtagaattttgaatggtcgcttaag------------cgacgctagttgctg 45051193  T
Q  532 tctgatgaatgcacgcttaag 552  Q
    |||||||||||||||||||||    
T  45051192 tctgatgaatgcacgcttaag 45051172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 20805376 - 20805294
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaatag 156  Q
    ||||||||||||||| |||||||||||||||  |||||||||| ||||||||||||||||||||| |||||||||||| ||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattgatttaacataaattgttcttgagatag 20805294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 21180244 - 21180311
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21180244 ggagaatcagattct-gtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 21180311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 18271412 - 18271345
Alignment:
Q  34 ggaggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  18271412 ggaggagaatcagatttttgtagagctttgttcatcaattcaaggtaagggtgagactaactctcaat 18271345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 18276066 - 18275999
Alignment:
Q  34 ggaggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  18276066 ggaggagaatcagatatttgtagagctttgttcatcaattcaaggtaagggtgagactaactctcaat 18275999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 19663517 - 19663618
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttga-aataggaattggggaattagg 172  Q
    ||||||||||||||||||| ||||| || ||  || ||||||| |||||||||||| ||||||||||||||||||||| ||||  |||| ||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattgttttaacatgaattgttcttgagaataaaaatt-gggaattagg 19663615  T
Q  173 gtt 175  Q
    |||    
T  19663616 gtt 19663618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 333 - 410
Target Start/End: Complemental strand, 18712598 - 18712521
Alignment:
Q  333 gaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||| | ||||||||||||||||||  |||||| |||||||||||||||||| |||| |||||||||| |||||||    
T  18712598 gaatgatcagaattgttgttgttgatgtctgttttgtgttcctttagatgcctagttgtgtattgaacctgtaaacat 18712521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 13227981 - 13227890
Alignment:
Q  35 gaggagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    ||||||||||||||||| ||||||| ||||||| || ||| ||||||||||||||||||||||||||| ||| |  | ||||||||||||||    
T  13227981 gaggagaatcagattttctgtagagttttgttcttcaatcaaaggtaagggtgagactaactctcaataattatagattatataacttctga 13227890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 20902221 - 20902157
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| ||||||||||| |||||||||||| ||  |||||||||||||| ||||||||||||    
T  20902221 ggagaatctgatttttgtagcgctttgttcatcaattcaaggtaagggtgaggctaactctcaat 20902157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 634968 - 635022
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    ||||||||||||| | |||||| |||||||||||||||||||||||||||||||||    
T  634968 ggagaatcagattct-gtagagttttgttcatcgatctaaggtaagggtgagacta 635022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 7791537 - 7791584
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctca 99  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  7791537 tgtagagctttgttcatcaatctaaggtaagggtgagactaacactca 7791584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 8686114 - 8686049
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatg 102  Q
    |||||| | |||||||| ||||||||||||||| |   ||||||||||||||||||||||||||||    
T  8686114 ggagaaactgatttttgaagagctttgttcatcaaatcaaggtaagggtgagactaactctcaatg 8686049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 28203731 - 28203784
Alignment:
Q  49 ttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatg 102  Q
    ||||||||||||||||||||| ||  |||||||||||||| |||||||||||||    
T  28203731 ttttgtagagctttgttcatcaattcaaggtaagggtgaggctaactctcaatg 28203784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 18712854 - 18712775
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaat 154  Q
    ||||||| ||||||||||| |||||||| ||  || ||||||| |||||||||||||| |||  |||||||||||||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaa-ttgaattgttcttgaaat 18712775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 21660446 - 21660394
Alignment:
Q  49 ttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||||||||||||||||||| ||  |||||||||||||| ||||||||||||    
T  21660446 ttttgtagagctttgttcatcaattcaaggtaagggtgaggctaactctcaat 21660394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 21526747 - 21526814
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    |||||||| |||| ||| | ||||||||||||| |  |||||||||||||||| ||||||||||||||    
T  21526747 ggagaatctgattcttggaaagctttgttcatcaaattaaggtaagggtgagaataactctcaatgat 21526814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 32651627 - 32651549
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa 153  Q
    ||||||||||||||||||| |||||||| ||  || ||||||| |||||||||||||| |||  ||| ||||||||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaa-ttgagttgttcttgaaa 32651549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 13527678 - 13527735
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    |||||||| |||||||||||||||||||||||| ||  ||||||||| |||| |||||    
T  13527678 ggagaatctgatttttgtagagctttgttcatcaattcaaggtaaggatgaggctaac 13527735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 20437024 - 20437080
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 20437080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 430
Target Start/End: Complemental strand, 45051327 - 45051296
Alignment:
Q  399 acctataaacattctttggaaacatgtttggg 430  Q
    ||||||||||||||||||||||||||||||||    
T  45051327 acctataaacattctttggaaacatgtttggg 45051296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 297449 - 297383
Alignment:
Q  38 gagaatcagatttttgtagagctttgttcatc-gatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||||||  ||||||||||||||||| ||  ||||||||||||||| ||||||  ||||||||    
T  297449 gagaatcagattt--gtagagctttgttcatctgaattaaggtaagggtgaggctaacttgcaatgatt 297383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 24476405 - 24476353
Alignment:
Q  49 ttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||| |||| |||||||||| |  ||||||||||||||||||| ||||||||    
T  24476405 ttttggagagttttgttcatcaaattaaggtaagggtgagactatctctcaat 24476353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 41112090 - 41112038
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaa 125  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| ||||||||    
T  41112090 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 41112038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 41394106 - 41394070
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  41394106 acctataaacattatttggaaacatatttgggcattg 41394070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 1e-61; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 73 - 435
Target Start/End: Complemental strand, 42961622 - 42961263
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa--taggaattggggaatta 170  Q
    |||||||||||||||| |||||  ||||||||| |||||||| | |||||||||||| || |  | |||||||||| ||||  || |||||||  |||||    
T  42961622 ctaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattgtttgatta-gaattgttctagaaaaataagaattgga-aatta 42961525  T
Q  171 gggttctaatactgattttgagttgaaaagttta-ggagacatgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttg 268  Q
    |||||||| |||||||||||    ||||||  || |||  ||||||||||||||||||||| ||| ||||||||| ||| |||| ||| |||  ||| ||    
T  42961524 gggttcta-tactgattttgga--gaaaagagtaaggattcatgttaattatgcttagaattcatattcagatcgattttaggaatta-taatgttgctg 42961429  T
Q  269 taatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgtttta 368  Q
    ||||| ||||| ||| ||||| ||| |||||||||| || ||||| ||   |||||||||||  ||||||  ||||||||||||||||||||||||||||    
T  42961428 taatccgaatttggagaggttagga-ttgttggagaaaaattgagggaaattgcaagattgtgagaatgagatgaattgttgttgttgatgcatgtttta 42961330  T
Q  369 tgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  42961329 tgttcctttagatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgggcattg 42961263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 74 - 435
Target Start/End: Complemental strand, 22337578 - 22337217
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa--taggaattggggaattag 171  Q
    |||||||||||||||||||||  ||||||||| ||||||||   |||||||||||| ||| |   |||||||||||||||  || ||||| |||||||||    
T  22337578 taaggtaagggtgagactaaccttcaatgattataatatatggtttctgaaaattgttttgattagaattgttcttgaaaaataagaatttgggaattag 22337479  T
Q  172 ggttctaatactgattttgagttgaaaagtttaggaga-catgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttgt 269  Q
    ||||||| ||||||||||| |  ||||||  || ||   ||||||||||||||||||||| ||| ||||||| | ||| |||| ||| |||  ||| |||    
T  22337478 ggttcta-tactgattttg-gaagaaaagagtaagaattcatgttaattatgcttagaattcatattcagattgattttaggaatta-taatgttgctgt 22337382  T
Q  270 aatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttat 369  Q
    |||| ||||| ||| ||||| ||| |||||||||  || ||| | ||   |||||||||||  ||||||  |||||||||||||||||||||||||||||    
T  22337381 aatccgaatttggagaggttagga-ttgttggaggaaaattgggggaaattgcaagattgtgagaatgagatgaattgttgttgttgatgcatgttttat 22337283  T
Q  370 gttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||    
T  22337282 gttcctttagatgcctaattgtataatgaacttataaacaatctttggaaacatgtttgggcattg 22337217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 74 - 435
Target Start/End: Complemental strand, 22341116 - 22340755
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa--taggaattggggaattag 171  Q
    ||||||||||||||| |||||  ||||||||| ||||||||   |||||||||||| ||| |   |||||||||||||||  || ||||| |||||||||    
T  22341116 taaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattgttttgattagaattgttcttgaaaaataagaatttgggaattag 22341017  T
Q  172 ggttctaatactgattttgagttgaaaagtttaggaga-catgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttgt 269  Q
    ||||||| ||||||||||| |  ||||||  || ||   ||||||||||||||||||||| ||| ||||||| | ||| |||| ||| |||  ||| |||    
T  22341016 ggttcta-tactgattttg-gaagaaaagagtaagaattcatgttaattatgcttagaattcatattcagattgattttaggaatta-taatgttgctgt 22340920  T
Q  270 aatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttat 369  Q
    |||| ||||| ||| ||||| ||| |||||||||  || ||| | ||   |||||||||||  ||||||  |||||||||||||||||||||||||||||    
T  22340919 aatccgaatttggagaggttagga-ttgttggaggaaaattgggggaaattgcaagattgtgagaatgagatgaattgttgttgttgatgcatgttttat 22340821  T
Q  370 gttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||    
T  22340820 gttcctttagatgcctaattgtataatgaacttataaacaatctttggaaacatgtttgggcattg 22340755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 340 - 554
Target Start/End: Original strand, 23111463 - 23111679
Alignment:
Q  340 ctgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggc-------- 431  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||            
T  23111463 ctgaattgttgttgttgatgcatgttttatgttcatttagatgcctaattgtatattgaaccgataaacaatctttggaaacatgtttgggcattgggag 23111562  T
Q  432 ------attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgctag 525  Q
          |||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||            ||||||||||||    
T  23111563 atcaaaattgggagttttgggtgaaaaatgggtgaaaaccgtaacttttgttctgcagaattttgaatggtcgctt------------aagcgacgctag 23111650  T
Q  526 ttgctgtctgatgaatgcacgcttaagcg 554  Q
    ||| |||||||||||||||||||||||||    
T  23111651 ttgttgtctgatgaatgcacgcttaagcg 23111679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 345 - 435
Target Start/End: Original strand, 28370321 - 28370411
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28370321 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacaatctttggaaacatgtttgggcattg 28370411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 331 - 435
Target Start/End: Complemental strand, 22750943 - 22750838
Alignment:
Q  331 tggaatgaactg-aattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgg 429  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  22750943 tggaatgatctgtaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgg 22750844  T
Q  430 gcattg 435  Q
    ||||||    
T  22750843 gcattg 22750838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 345 - 435
Target Start/End: Original strand, 38144803 - 38144893
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  38144803 ttgttgttcttgatgcatgttttatgttcctttagatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgggcattg 38144893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 19512174 - 19512084
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| | |||||||||||||||||||||||    
T  19512174 ttgttgttgttgatgcatgttttatgttcctttagatgtctaattgtataatgaacctataaacaatatttggaaacatgtttgggcattg 19512084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 432 - 559
Target Start/End: Original strand, 29190688 - 29190803
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgctagttgctg 531  Q
    |||| |||||||||||||||||||||||||| | |||||||||||| | |||||||||||||||||||||            ||||||||||||||||||    
T  29190688 attgggagttttgggtgaaaaatgggtgaaacccgtaacttttgttatgcagaattttgaatggtcgctt------------aagcgacgctagttgctg 29190775  T
Q  532 tctgatgaatgcacgcttaagcgagctg 559  Q
    ||||||||||||||||||||||| ||||    
T  29190776 tctgatgaatgcacgcttaagcgtgctg 29190803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 22438745 - 22438824
Alignment:
Q  71 atctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttg 150  Q
    |||||||||||||||||||||| |||||||| ||  |||| ||||| ||||||||||||  |||||||||||||||||||    
T  22438745 atctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattgtcttaacatgaattgttcttg 22438824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 17813571 - 17813483
Alignment:
Q  38 gagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    |||||||||||||| ||||||| ||||||| || ||| ||||||||||||||||||||||||||||||| |  | ||||||||||||||    
T  17813571 gagaatcagattttctgtagagttttgttcttcaatcaaaggtaagggtgagactaactctcaatgattatagattatataacttctga 17813483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 33472528 - 33472584
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  33472528 ggagaatcagattct-gtagagctttgttcatcgatctaaggtaagggtgagactaac 33472584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 36461117 - 36461064
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  36461117 tgtagagctttgttcatcaatctaaggtaagggtgaggctaactctcaatgatt 36461064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 18407944 - 18408022
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa 153  Q
    ||||||||||||||||||| |||||||| ||  |||||||||| |||||||||||||| |||  ||||||||||||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaa-ttgaattgttcttgaaa 18408022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 333 - 402
Target Start/End: Original strand, 18408200 - 18408269
Alignment:
Q  333 gaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacct 402  Q
    |||||| |||||||||||||||| |||| |||||| |||||||||||||||||| ||||| | |||||||    
T  18408200 gaatgatctgaattgttgttgttaatgcctgttttgtgttcctttagatgcctagttgtacaatgaacct 18408269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 21980045 - 21980098
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||||||||||| |||||||||||||||||| | ||||||||||||||    
T  21980045 tgtagagctttgttcatcaatctaaggtaagggtgaggccaactctcaatgatt 21980098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 22356882 - 22356931
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  22356882 tgtagagctttgttcatcaatctaaggtaagggtgaggctaactctcaat 22356931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 23111200 - 23111278
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa 153  Q
    ||||||||||||||||||| |||||||| ||  || ||||||| |||||||||||||| |||  ||||||||||||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaa-ttgaattgttcttgaaa 23111278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 21663109 - 21663170
Alignment:
Q  39 agaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||||||| ||||||||||||    
T  21663109 agaatcagattct-gtagagttttgttcatcaatctaaggtaagggtgaggctaactctcaat 21663170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 26707462 - 26707396
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatct-aaggtaagggtgagactaactctcaatg 102  Q
    |||||||| |||||||| ||||||||||||||| |  | ||||||||||||||||||||||||||||    
T  26707462 ggagaatctgatttttggagagctttgttcatcaaaatcaaggtaagggtgagactaactctcaatg 26707396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 26977196 - 26977130
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatct-aaggtaagggtgagactaactctcaatg 102  Q
    |||||||| |||||||| ||||||||||||||| |  | ||||||||||||||||||||||||||||    
T  26977196 ggagaatctgatttttggagagctttgttcatcaaaatcaaggtaagggtgagactaactctcaatg 26977130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 21553354 - 21553418
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatg 102  Q
    ||||||||||||| |  ||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  21553354 ggagaatcagattcta-tagagttttgttcatcaatctaaggtaagggtgaggctaactctcaatg 21553418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 24276462 - 24276530
Alignment:
Q  38 gagaatcagatttttg-tagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||| ||||||| ||||| ||  |||||| |||||||||||||||||| ||||||||||||||||    
T  24276462 gagaatcatatttttggtagagtttgattcatcaatctaaggtaagggtgaggctaactctcaatgatt 24276530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 24385751 - 24385683
Alignment:
Q  38 gagaatcagatttttg-tagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||| ||||||| ||||| ||  |||||| |||||||||||||||||| ||||||||||||||||    
T  24385751 gagaatcatatttttggtagagtttgattcatcaatctaaggtaagggtgaggctaactctcaatgatt 24385683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 38144536 - 38144593
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  38144536 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 38144593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 7786268 - 7786200
Alignment:
Q  37 ggagaatcagatttttgta-gagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    |||||||| |||||||| | ||| |||||||||| |   ||||||||||||||||||||||||||||||    
T  7786268 ggagaatctgatttttggaagagttttgttcatcaaatcaaggtaagggtgagactaactctcaatgat 7786200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 19512441 - 19512385
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 19512385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 28370055 - 28370111
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 28370111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 105
Target Start/End: Complemental strand, 6766810 - 6766779
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||||||||||||||||||||||    
T  6766810 taaggtaagggtgagactaactctcaatgatt 6766779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 579
Target Start/End: Original strand, 23111685 - 23111715
Alignment:
Q  549 taagcgagctggtaagcgtgcagtcacagta 579  Q
    |||||||||||||||||||||||||||||||    
T  23111685 taagcgagctggtaagcgtgcagtcacagta 23111715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 43122109 - 43122047
Alignment:
Q  43 tcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||  ||| || |||||| |||||||||||||||||| ||||||  ||||||||    
T  43122109 tcagatttttgttaagcattattcatcaatctaaggtaagggtgaggctaacttgcaatgatt 43122047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 43125642 - 43125580
Alignment:
Q  43 tcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||  ||| || |||||| |||||||||||||||||| ||||||  ||||||||    
T  43125642 tcagatttttgttaagcattattcatcaatctaaggtaagggtgaggctaacttgcaatgatt 43125580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 508
Target Start/End: Complemental strand, 34939116 - 34939040
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaa-ttttgaatggtcgcttaagcgac 508  Q
    |||| ||||||||||||||||| ||||| || | ||||| ||| |||| ||||| |||||||||||||||| ||||||    
T  34939116 attgggagttttgggtgaaaaaggggtggaacccgtaacattt-ttctgcagaaattttgaatggtcgctttagcgac 34939040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 17021877 - 17021941
Alignment:
Q  38 gagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||| |||||||| ||||||| | ||| | || |||||||||||||||||||||| ||||||||    
T  17021877 gagaaccagattttctgtagagttctgtccttcaatctaaggtaagggtgagactatctctcaat 17021941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 23528686 - 23528634
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaa 125  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| ||||||||    
T  23528686 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 23528634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 427
Target Start/End: Original strand, 29190641 - 29190669
Alignment:
Q  399 acctataaacattctttggaaacatgttt 427  Q
    |||||||||||||||||||||||||||||    
T  29190641 acctataaacattctttggaaacatgttt 29190669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 119; Significance: 2e-60; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 74 - 435
Target Start/End: Complemental strand, 34495 - 34135
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa--taggaattggggaattag 171  Q
    ||||||||||||||| |||||  |||| |||| ||||||||   |||||||||||| ||| |   |||||||||||||||  || |||||||| ||||||    
T  34495 taaggtaagggtgaggctaaccttcaaagattataatatatggtttctgaaaattgttttgattagaattgttcttgaaaaataagaattggg-aattag 34397  T
Q  172 ggttctaatactgattttgagttgaaaagttta-ggagacatgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttgt 269  Q
    ||||||| ||||||||||| |  ||||||  || |||  ||||||||||||||||||||| ||| ||||||||| ||| |||| ||| |||  ||| |||    
T  34396 ggttcta-tactgattttg-gaagaaaagagtaaggattcatgttaattatgcttagaattcatattcagatcgattttaggaatta-taatgttgctgt 34300  T
Q  270 aatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttat 369  Q
    |||| ||||| ||| ||||| ||| |||||||||| || ||| | ||   |||||||||||  ||||||  ||||||||||||| |||||||||||||||    
T  34299 aatccgaatttggagaggttagga-ttgttggagaaaaattgggggaaattgcaagattgtgagaatgagatgaattgttgttgatgatgcatgttttat 34201  T
Q  370 gttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  34200 gttcctttagatgcctaattgtataatgaacctataaacaatctttggaaacatgtttgggcattg 34135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 135531 - 135427
Alignment:
Q  71 atctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaatta 170  Q
    |||||||||||||||||||||| |||||||| ||  || ||||||| |||||||||||| ||||||||||||||||||||| |||  ||||||| |||||    
T  135531 atctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgttttaacatgaattgttcttgagataaaaattgggaaatta 135432  T
Q  171 gggtt 175  Q
    |||||    
T  135431 gggtt 135427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 135279 - 135227
Alignment:
Q  325 gattgttggaatgaactgaattgttgttgttgatgcatgttttatgttccttt 377  Q
    ||||| |||||||| ||||||||||||||||||||| |||||| |||||||||    
T  135279 gattgctggaatgatctgaattgttgttgttgatgcctgttttgtgttccttt 135227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 109 - 410
Target Start/End: Original strand, 81246 - 81547
Alignment:
Q  109 atatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattagggttctaatactgattttgagttgaaaagtttaggag 208  Q
    |||||||| ||||||||||||||||||||| |||||||||||| ||||||| || | ||||||||||||| ||||||||||||   ||||||| |||||     
T  81246 atatataatttctgaaaattgatttaacataaattgttcttgagataggaaatgtg-aattagggttctattactgattttgaagggaaaagtgtaggaa 81344  T
Q  209 acatgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttgtaatcagaattgg-gaaaggttgggagttgttggagaga 306  Q
     |||||| | | |||||||||| | ||||||||| | |||||  |||||| || |||| ||||||||||||| | |  || || ||| ||||||||||||    
T  81345 tcatgtttaatgtgcttagaattcgtgttcagattgatttcaaaatttag-aatattgctgtaatcagaatttgagggagattaggatttgttggagaga 81443  T
Q  307 atttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataa 406  Q
    ||||| |||| | |||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||| || ||||||| |||    
T  81444 atttgtgagaatttgcaagattgttagtatgagctgaattgttgttgttgatgcctgttttatgttcctttagatgcctagttgtgtactgaacctgtaa 81543  T
Q  407 acat 410  Q
    ||||    
T  81544 acat 81547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 74 - 410
Target Start/End: Complemental strand, 52304 - 51968
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattaggg 173  Q
    ||||||||||||||| |||||  ||||||||| |||||||| | || ||||||||||||| |  ||||||||||||||||    || | | |||||||||    
T  52304 taaggtaagggtgaggctaaccttcaatgattataatatatgatttatgaaaattgatttgatttgaattgttcttgaaaataaaaatcgagaattaggg 52205  T
Q  174 ttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttgtaat 272  Q
    ||||| ||| ||||||||   ||||||| |||||  |||||| | | |||||||||| ||||||||||| | |||||| || ||| || |||| ||||||    
T  52204 ttcta-taccgattttgaaaggaaaagtgtaggaatcatgtttaatgtgcttagaattcatgttcagattgatttcagaatctag-aatattgctgtaat 52107  T
Q  273 cagaattgg-gaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgt 371  Q
    ||||||| | |  || || ||| |||||||||| | ||||||||||| |||||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  52106 cagaatttgagggagattaggatttgttggagaaagtttgagagattttgcaagattgttagaatgagctgaattgttgttgttgatgcctgttttatgt 52007  T
Q  372 tcctttagatgcctaattgtatattgaacctataaacat 410  Q
    ||||| ||||||||| |||| || ||||||| |||||||    
T  52006 tccttaagatgcctagttgtgtactgaacctgtaaacat 51968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 103; Significance: 6e-51; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 74 - 435
Target Start/End: Original strand, 8770 - 9131
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa--taggaattggggaattag 171  Q
    ||||||||||||||| |||||  ||||||||| ||||||||   |||||||||||| ||| |   |||||||||||||||  || ||||| | |||||||    
T  8770 taaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattgttttgattagaattgttcttgaaaaataagaatttgagaattag 8869  T
Q  172 ggttctaatactgattttgagttgaaaagttta-ggagacatgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttgt 269  Q
    ||||||| ||||||||||| |  ||||||  || |||  |||||| |||||||||||||| ||| ||||||||  ||| |||| ||| |||  ||| |||    
T  8870 ggttcta-tactgattttg-gaagaaaagagtaaggattcatgttgattatgcttagaattcatattcagatcaattttaggaatta-taatgttgctgt 8966  T
Q  270 aatcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttat 369  Q
    |||  ||||| ||| ||||| ||| | |||||||| || ||| | ||   |||||||||||  ||||||  |||||||||||||||||||||||||||||    
T  8967 aattcgaatttggagaggttagga-tggttggagaaaaattgggggaaattgcaagattgtgagaatgagatgaattgttgttgttgatgcatgttttat 9065  T
Q  370 gttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  9066 gttcctttagatgcttaattgtataatgaacctataaacaatctttggaaacatgtttcggcattg 9131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 75 - 316
Target Start/End: Original strand, 39508 - 39746
Alignment:
Q  75 aaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattagggt 174  Q
    |||||||||||||| |||||||||||||||  |||||||||| ||| ||||||||||||||  |||||||||||||| ||||||||| | ||||||||||    
T  39508 aaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattgatttaaattgaattgttcttgagataggaatt-gtgaattagggt 39606  T
Q  175 tctaatactgattttg-agttgaaaagtttaggagacatgttaattatgcttagaatcatgttcagatcgttttcaggatttagtaacattgttgtaatc 273  Q
     ||| ||||||||||| ||   |||||| |||||  |||||| ||||||||||||| | ||||||||||| ||| |||||   |||||||||||||||||    
T  39607 actactactgattttgaagggaaaaagtgtaggaatcatgttgattatgcttagaaacctgttcagatcgattttaggatgctgtaacattgttgtaatc 39706  T
Q  274 agaattgggaaaggttgggagttgttggagagaatttgagaga 316  Q
    ||||||||||||| || ||| ||||||  ||||||||||||||    
T  39707 agaattgggaaagattagga-ttgttg--gagaatttgagaga 39746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 96; Significance: 9e-47; HSPs: 3)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 432 - 559
Target Start/End: Original strand, 16660 - 16787
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgctagttgctg 531  Q
    |||| |||||||||||||||||||||||||| | |||||||||||| | |||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  16660 attgggagttttgggtgaaaaatgggtgaaacccgtaacttttgttatgcagaattttgaatggtcgcttaagcgacactgcaagcgaagctagttgctg 16759  T
Q  532 tctgatgaatgcacgcttaagcgagctg 559  Q
    ||||||||||||||||||||||| ||||    
T  16760 tctgatgaatgcacgcttaagcgtgctg 16787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 16613 - 16649
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||||||||||||||    
T  16613 acctataaacattctttggaaacatgtttgggcattg 16649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 579
Target Start/End: Original strand, 16788 - 16818
Alignment:
Q  549 taagcgagctggtaagcgtgcagtcacagta 579  Q
    |||||||||||||||||||||||||||||||    
T  16788 taagcgagctggtaagcgtgcagtcacagta 16818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 91; Significance: 9e-44; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 441 - 559
Target Start/End: Original strand, 34834 - 34952
Alignment:
Q  441 tttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgctagttgctgtctgatgaa 540  Q
    ||||||||||||| |||||||| | |||||||||||||| | |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  34834 tttgggtgaaaaaggggtgaaacccgtaacttttgttctgcggaattttgaatggtcgcttaagcgacgctgcaagtgacgctagttgctgtctgatgaa 34933  T
Q  541 tgcacgcttaagcgagctg 559  Q
    |||||||||||||||||||    
T  34934 tgcacgcttaagcgagctg 34952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 84; Significance: 1e-39; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 74 - 420
Target Start/End: Complemental strand, 2115 - 1780
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa-taggaattggggaattagg 172  Q
    |||||||||| |||| ||||||||||||||||||| ||||||| ||||||||||||| |||| ||||||||||||||||| ||  ||||||| |||||||    
T  2115 taaggtaaggctgaggctaactctcaatgattgtattatataatttctgaaaattgacttaatatgaattgttcttgaaaataaaaattggg-aattagg 2017  T
Q  173 gttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttgtaa 271  Q
    |||||| ||||||||| ||   |||| |  || |   |||||||||| |||| ||||| | | |||||||          ||||| |||  ||| |||||    
T  2016 gttcta-tactgatttcgaaa-gaaatgagtaaggatcatgttaattgtgctgagaattcgtattcagatta--------attta-taatgttgctgtaa 1928  T
Q  272 tcagaattgggaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgt 371  Q
    |||||||| ||| ||||| ||| |||||||||| ||||| ||||||| ||||||||| |  ||||||  ||||||||||||||||||||||||||| |||    
T  1927 tcagaatttggagaggttagga-ttgttggagaaaatttcagagattttgcaagattttaagaatgagttgaattgttgttgttgatgcatgttttgtgt 1829  T
Q  372 tcctttagatgcctaattgtatattgaacctataaacattctttggaaa 420  Q
    |||||||||||||| ||| ||||| |||||| |||||||| | ||||||    
T  1828 tcctttagatgccttattatatatagaacctgtaaacattttatggaaa 1780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 74 - 376
Target Start/End: Complemental strand, 69801 - 69500
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattaggg 173  Q
    |||||||||||||||||||||| ||||||||  |||||||||| || ||||||   |||||||||||||||||||||| |||   |||||| ||||||||    
T  69801 taaggtaagggtgagactaactttcaatgatcttaatatataatttatgaaaaaaaatttaacatgaattgttcttgagataaagattggg-aattaggg 69703  T
Q  174 ttctaatactgattttgagttgaaaagtttaggagacatgttaattatgcttagaat-catgttcagatcgttttcaggatttagtaacattgttgtaat 272  Q
    |||||   | ||||||||   ||||||| |||||  |||||| | | |||||||||| ||| ||||||| | || ||  |||||| ||  ||| || |||    
T  69702 ttctaggcc-gattttgaaaggaaaagtgtaggaatcatgtttaatgtgcttagaattcatattcagattgattacaatatttag-aatgttgctggaat 69605  T
Q  273 cagaattgg-gaaaggttgggagttgttggagagaatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgt 371  Q
    ||||||| | |  || || ||| |||||||||| ||||||| ||||| |||||||||||| |||| | || ||||||||||||||||||||||||||||     
T  69604 cagaatttgagggagattaggatttgttggagaaaatttgaaagattttgcaagattgttagaataatctaaattgttgttgttgatgcatgttttatgc 69505  T
Q  372 tcctt 376  Q
    |||||    
T  69504 tcctt 69500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 439 - 507
Target Start/End: Complemental strand, 79378 - 79311
Alignment:
Q  439 gttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcga 507  Q
    ||||||||||||||| || ||||| ||||||| ||| |||| ||||||| |||||||||||||||||||    
T  79378 gttttgggtgaaaaagggttgaaacctgtaacattt-ttctgcagaattatgaatggtcgcttaagcga 79311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 340 - 435
Target Start/End: Complemental strand, 10033 - 9937
Alignment:
Q  340 ctgaattgttgttgttga-tgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10033 ctgaattgttgttgttgaatgcatgttttatgttcatttagatgcctaattgtatattgaacctataaacaatctttggaaacatgtttgggcattg 9937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 75; Significance: 3e-34; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 111474 - 111384
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| | |||||||||||||||||||||||    
T  111474 ttgttgttgttgatgcatgttttatgttcctttagatgtctaattgtataatgaacctataaacaatatttggaaacatgtttgggcattg 111384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 331 - 410
Target Start/End: Original strand, 12104 - 12184
Alignment:
Q  331 tggaatgaactg-aattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||||| ||| |||||||||||||||||  |||||| |||||||||||||||||| |||||||| | |||| |||||||    
T  12104 tggaatgatctgtaattgttgttgttgatggctgttttgtgttcctttagatgcctagttgtatataggacctgtaaacat 12184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 111742 - 111684
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  111742 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 111684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 11850 - 11907
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  11850 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 11907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 71; Significance: 7e-32; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 345 - 435
Target Start/End: Original strand, 10463 - 10553
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  10463 ttgttgttgttgatgcgtgttttatgttcctttagatgtcttattgtataatgaacctataaacaatctttggaaacatgtttgggcattg 10553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 10194 - 10252
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||| ||||| |||||||| ||  |||| ||||| |||||||||||||    
T  10194 tctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattga 10252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 71; Significance: 7e-32; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 345 - 435
Target Start/End: Original strand, 1793 - 1883
Alignment:
Q  345 ttgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  1793 ttgttgttgttgatgcgtgttttatgttcctttagatgtcttattgtataatgaacctataaacaatctttggaaacatgtttgggcattg 1883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 1524 - 1582
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||| ||||| |||||||| ||  |||| ||||| |||||||||||||    
T  1524 tctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattga 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 74 - 177
Target Start/End: Original strand, 14997 - 15099
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattaggg 173  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||||||||||| ||||||||||||||||||||| |||   ||| |||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattgttttaacatgaattgttcttgagataaagatt-gggaattaggg 15095  T
Q  174 ttct 177  Q
    ||||    
T  15096 ttct 15099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 306 - 410
Target Start/End: Original strand, 15227 - 15331
Alignment:
Q  306 aatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctata 405  Q
    |||| |||||||| || ||||||| | |||||| ||||||||||||||||||||| |||||| |||||||||||||||||| |||| |||||||||| ||    
T  15227 aattggagagattttgtaagattgctagaatgatctgaattgttgttgttgatgcctgttttgtgttcctttagatgcctagttgtgtattgaacctgta 15326  T
Q  406 aacat 410  Q
    |||||    
T  15327 aacat 15331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 40529 - 40633
Alignment:
Q  71 atctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaatta 170  Q
    |||||||||||||||||||||| |||||||| ||  || ||||||| |||||||||||| ||||||||||||||||||||| |||  ||||||| |||||    
T  40529 atctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgttttaacatgaattgttcttgagataaaaattgggaaatta 40628  T
Q  171 gggtt 175  Q
    |||||    
T  40629 gggtt 40633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 306 - 410
Target Start/End: Complemental strand, 1213 - 1109
Alignment:
Q  306 aatttgagagattatgcaagattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctata 405  Q
    |||| |||||||| || ||||||  | |||||| ||||||||||||||||||||| |||||| |||||||||||||||||| || | |||||||||||||    
T  1213 aattggagagattttgtaagatttatagaatgatctgaattgttgttgttgatgcctgttttgtgttcctttagatgcctagttatgtattgaacctata 1114  T
Q  406 aacat 410  Q
    |||||    
T  1113 aacat 1109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 1441 - 1384
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgat 131  Q
    ||||||||||||||||||| || ||||||||  | |||||||| || |||||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgat 1384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 432 - 555
Target Start/End: Original strand, 8602 - 8728
Alignment:
Q  432 attgtgagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgct----agtt 527  Q
    |||| ||||||||||||||||| |||||||| | ||||| ||| |||| ||||||||||||||||||||||||||||  | |||||||||||    ||||    
T  8602 attgggagttttgggtgaaaaaggggtgaaacccgtaacattt-ttctacagaattttgaatggtcgcttaagcgacgatacaagcgacgctgcaaagtt 8700  T
Q  528 gctgtctgatgaatgcacgcttaagcga 555  Q
    |||||||||||| ||  |||||||||||    
T  8701 gctgtctgatgactgttcgcttaagcga 8728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 8555 - 8591
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||| |||||||||||||||||||||||||    
T  8555 acctataaacaatctttggaaacatgtttgggcattg 8591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 333 - 410
Target Start/End: Original strand, 264 - 341
Alignment:
Q  333 gaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||||||||||| |||| |||||||||| |||||||    
T  264 gaatgatctgaattgttgttgttaatgcatgttttgtgttcctttagatgcctagttgtgtattgaacctgtaaacat 341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 8 - 86
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa 153  Q
    ||||||||||||||||||| |||||||| ||  ||||| |||| |||||||||||||| |||  ||||||||||||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaa-ttgaattgttcttgaaa 86  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 440 - 554
Target Start/End: Complemental strand, 19035 - 18918
Alignment:
Q  440 ttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgct----agttgctgtctg 535  Q
    |||||||||||||  || | ||||| ||||| ||| || | |||||||||||||||||||||||||||||||||||||||||||    ||||| ||||||    
T  19035 ttttgggtgaaaaggggttcaaaaccgtaacatttttt-tgcagaattttgaatggtcgcttaagcgactctgcaagcgacgctgcaaagttgttgtctg 18937  T
Q  536 atgaatgcacgcttaagcg 554  Q
    |||| ||||||||||||||    
T  18936 atgactgcacgcttaagcg 18918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 440 - 554
Target Start/End: Complemental strand, 21119 - 21002
Alignment:
Q  440 ttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcgactctgcaagcgacgct----agttgctgtctg 535  Q
    |||||||||||||  || | ||||| ||||| ||| || | |||||||||||||||||||||||||||||||||||||||||||    ||||| ||||||    
T  21119 ttttgggtgaaaaggggttcaaaaccgtaacatttttt-tgcagaattttgaatggtcgcttaagcgactctgcaagcgacgctgcaaagttgttgtctg 21021  T
Q  536 atgaatgcacgcttaagcg 554  Q
    |||| ||||||||||||||    
T  21020 atgactgcacgcttaagcg 21002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 335 - 410
Target Start/End: Original strand, 102186 - 102261
Alignment:
Q  335 atgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||| ||||||||||||||||||||| |||||| |||||||||||||||||| |||| |||||||||| |||||||    
T  102186 atgatctgaattgttgttgttgatgcctgttttgtgttcctttagatgcctagttgtgtattgaacctgtaaacat 102261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 101928 - 102006
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa 153  Q
    ||||||||||||||||||| |||||||| ||  || ||||||| | |||||||||||| |||  ||||||||||||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaa-ttgaattgttcttgaaa 102006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 1504 - 1428
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttga 151  Q
    |||||||||||||||||||||||||||||||  |||| ||||| ||||| |||||| |||||||||||||||||||||    
T  1504 taaggtaagggtgagactaactctcaatgatcttaatgtataatttctg-aaattgttttaacatgaattgttcttga 1428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 50; Significance: 3e-19; HSPs: 3)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 333 - 410
Target Start/End: Original strand, 22849 - 22926
Alignment:
Q  333 gaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| | |||| |||||||    
T  22849 gaatgacctgaattgttgttgttgatgcatgttttgtgttcctttagatgcctagttgtgtatcggacctgtaaacat 22926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 75 - 175
Target Start/End: Original strand, 22594 - 22693
Alignment:
Q  75 aaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaataggaattggggaattagggt 174  Q
    |||||||||||||||||| |||||||| ||  || ||||||| |||||||||| | ||||||||||||||||||||| |||  |||| ||||||||||||    
T  22594 aaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatcgttttaacatgaattgttcttgagataaaaatt-gggaattagggt 22692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 340 - 410
Target Start/End: Original strand, 15198 - 15268
Alignment:
Q  340 ctgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||| |||| ||| | |||| |||||||    
T  15198 ctgaattgttgttgttgatgcctgttttgtgttcctttagatgcctagttgtgtataggacctgtaaacat 15268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 333 - 410
Target Start/End: Complemental strand, 16619 - 16542
Alignment:
Q  333 gaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||| ||||||||||||||||||||| ||||||  ||||||||||||||||| |||| |||||||||| |||||||    
T  16619 gaatgatctgaattgttgttgttgatgcctgttttgcgttcctttagatgcctagttgtgtattgaacctgtaaacat 16542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 16875 - 16797
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa 153  Q
    ||||||||||||||||||| |||||||| ||  || ||||||| |||||||||||||| |||  ||||||||||||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaa-ttgaattgttcttgaaa 16797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 1226 - 1159
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||||||||||| ||||||||||||||||    
T  1226 ggagaatcagatttt-gtagagctttgtttatcaatctaaggtaagggtgaggctaactctcaatgatt 1159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 8046 - 7978
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||| |||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||    
T  8046 ggagaatctgatttttgtagagctttgttcatcaattcaaggtaagggtgaggctaactctcaatgatt 7978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 3884 - 3793
Alignment:
Q  35 gaggagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    ||||||||||||||||| ||||||| ||||||| || ||| ||||||||||||||||||||||||||||||| |  | ||||||||||||||    
T  3884 gaggagaatcagattttctgtagagttttgttcttcaatcaaaggtaagggtgagactaactctcaatgattatagattatataacttctga 3793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 14946 - 15015
Alignment:
Q  35 gaggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||||| ||||| ||||||||||||||||    
T  14946 gaggagaatctgatttt-gtagagctttgttcatcaatctaaggtaagcgtgaggctaactctcaatgatt 15015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 15067 - 15132
Alignment:
Q  35 gaggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||||| |||||| ||||||||||||||||| || ||||||||| ||||| ||||||||||||    
T  15067 gaggagaatctgatttt-gtagagctttgttcatcaatttaaggtaagcgtgaggctaactctcaat 15132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 33893 - 33958
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatg 102  Q
    |||||||| |||||||||||||||||||||||| ||  |||||||||||||| |||||||||||||    
T  33893 ggagaatctgatttttgtagagctttgttcatcaattcaaggtaagggtgaggctaactctcaatg 33958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 409
Target Start/End: Complemental strand, 73091 - 73007
Alignment:
Q  325 gattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaaca 409  Q
    ||||||||||||||  ||||| | ||||||| |||||| |||| ||||||||| |||| ||| |||| ||| | |||| ||||||    
T  73091 gattgttggaatgagttgaatggatgttgttaatgcatattttgtgttcctttcgatgtctagttgtgtataggacctgtaaaca 73007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 176880 - 176824
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaac 94  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  176880 ggagaatcagattct-gtagagctttgttcatcgatctaaggtaagggtgagactaac 176824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 152089 - 152129
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  152089 tgtagagctttgttcatcaatctaaggtaagggtgggacta 152129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 69079 - 68988
Alignment:
Q  35 gaggagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    ||||||||||||||||| ||||||| ||||||| || ||| ||||||||||||||||||||||||||| ||| |  | ||||||||||||||    
T  69079 gaggagaatcagattttctgtagagttttgttcttcaatcaaaggtaagggtgagactaactctcaataattatagattatataacttctga 68988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 182010 - 182078
Alignment:
Q  37 ggagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    |||||||| |||||| |||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  182010 ggagaatctgattttctgtagagctttgttcatcaattcaaggtaagggtgagactaactctcaatgat 182078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 172087 - 172127
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    |||||||||||||||| | |||||||||||||||| |||||    
T  172087 tgtagagctttgttcaccaatctaaggtaagggtgggacta 172127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 1143 - 1092
Alignment:
Q  54 tagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  1143 tagagctttgttcatcaatctaaggtaagggtgaggctaactctcaatgatt 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 634 - 705
Alignment:
Q  34 ggaggagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    |||| ||||||||||||| ||||||| ||||||| || ||| ||||||||||||||||||||||||||||||    
T  634 ggagaagaatcagattttctgtagagttttgttcttcaatcaaaggtaagggtgagactaactctcaatgat 705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 326 - 411
Target Start/End: Original strand, 11258 - 11343
Alignment:
Q  326 attgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacatt 411  Q
    |||||| |||||  ||||||||||||||||||||  |||||| ||||||||||||||||||| ||| ||| | |||| ||||||||    
T  11258 attgtttgaatgctctgaattgttgttgttgatgtctgttttgtgttcctttagatgcctaactgtgtataggacctgtaaacatt 11343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 11372 - 11460
Alignment:
Q  38 gagaatcagatttttg-tagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    |||||||||||||||| ||||| || ||||||| ||  ||||||||||||||||||||||||||||||| |  | ||||||||||||||    
T  11372 gagaatcagatttttggtagagtttggttcatcaattcaaggtaagggtgagactaactctcaatgattttagattatataacttctga 11460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 3464 - 3384
Alignment:
Q  331 tggaatgaactg-aattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||||| ||| |||||||||||||||||  |||||| |||||||||||||||||| |||| ||| |||||| |||||||    
T  3464 tggaatgatctgtaattgttgttgttgatggctgttttgtgttcctttagatgcctagttgtgtatagaacctgtaaacat 3384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 7937 - 7873
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||||||||||||||||||||| ||  || ||||||||||| ||||||||||||    
T  7937 ggagaatctgatttttgtagagctttgttcatcaattcaatgtaagggtgaggctaactctcaat 7873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 12551 - 12487
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||||||||||||||||||||| ||  || ||||||||||| ||||||||||||    
T  12551 ggagaatctgatttttgtagagctttgttcatcaattcaatgtaagggtgaggctaactctcaat 12487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 10546 - 10482
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||||||||||||||||||||| ||  || ||||||||||| ||||||||||||    
T  10546 ggagaatctgatttttgtagagctttgttcatcaattcaatgtaagggtgaggctaactctcaat 10482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 2203 - 2140
Alignment:
Q  39 agaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatga 103  Q
    ||||||||||| | ||||||||||||||||| |||||||||||||||||| ||| ||||||||||    
T  2203 agaatcagattct-gtagagctttgttcatcaatctaaggtaagggtgaggctagctctcaatga 2140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 17701 - 17625
Alignment:
Q  71 atctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttc 147  Q
    |||||||||||||||||||||| |||||||| |   |||| ||||| ||||||||||||  ||||||||||||||||    
T  17701 atctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattgtcttaacatgaattgttc 17625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 21939 - 21848
Alignment:
Q  35 gaggagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat--tgtaatatataacttctga 123  Q
    ||||||||| ||||||| ||||||| ||||||| || ||| ||||||||||||||||||||||||||| ||  | || ||||||||||||||    
T  21939 gaggagaataagattttctgtagagttttgttcttcaatcaaaggtaagggtgagactaactctcaataattatatattatataacttctga 21848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 105
Target Start/End: Complemental strand, 34592 - 34521
Alignment:
Q  35 gaggagaatcagatttttg-tagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||||||||| ||||| ||  |||||  |||||||||||||||||| ||||||||||||||||    
T  34592 gaggagaatcagatttttggtagagtttgattcattaatctaaggtaagggtgaggctaactctcaatgatt 34521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 7430 - 7497
Alignment:
Q  35 gaggagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||||||||||||||  ||||||| ||||||| || ||| |||||||||||||||||||||||||||    
T  7430 gaggagaatcagatttcctgtagagttttgttcttcaatcaaaggtaagggtgagactaactctcaat 7497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 30656 - 30577
Alignment:
Q  331 tggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||||||| ||||||||||||||||||||| |||||    |||||||||||||||| ||| |||| |||||| |||||||    
T  30656 tggaatgatctgaattgttgttgttgatgcctgtttgtgtttcctttagatgcctagttgcatatagaacctgtaaacat 30577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 30913 - 30856
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  30913 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 30856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 13687 - 13609
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattgatttaacatgaattgttcttgaaa 153  Q
    ||||||||||||||||||| |||||||| ||  ||||| |||| |||||||||||||| |||  ||||||||||||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaa-ttgaattgttcttgaaa 13609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 437 - 515
Target Start/End: Complemental strand, 35343 - 35265
Alignment:
Q  437 gagttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaa-ttttgaatggtcgcttaagcgactctgcaa 515  Q
    ||||||||||||||||| |||||||| | ||||| ||| |||| ||||| ||||||||||||||||||||||| ||||||    
T  35343 gagttttgggtgaaaaaggggtgaaacccgtaacattt-ttctacagaaattttgaatggtcgcttaagcgacgctgcaa 35265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 35395 - 35359
Alignment:
Q  399 acctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||| |||||||||||||||||||||||||    
T  35395 acctataaacaatctttggaaacatgtttgggcattg 35359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 31411 - 31478
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    |||||||| |||||||| |||| |||||||||| |   ||||||||||||||||||||||||||||||    
T  31411 ggagaatctgatttttggagagttttgttcatcaaatcaaggtaagggtgagactaactctcaatgat 31478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 18225 - 18168
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| || ||||||||||    
T  18225 ctaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattga 18168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 343 - 410
Target Start/End: Complemental strand, 17958 - 17890
Alignment:
Q  343 aattgttgttgttgatgcatgttttat-gttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    ||||||||||||| |||| ||||||   ||||||||||| |||||||||| ||| |||||| |||||||    
T  17958 aattgttgttgttaatgcctgtttttgcgttcctttagaggcctaattgtgtatagaacctgtaaacat 17890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 52062 - 51985
Alignment:
Q  64 ttcatcgatctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctgaaaattgatttaacatga 140  Q
    |||||| ||||||||||||||||||||||||||||||||||| |  | ||||||||||||| |  ||||||||||||||    
T  52062 ttcatcaatctaaggtaagggtgagactaactctcaatgattatagattatataacttctg-attttgatttaacatga 51985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 582 - 643
Alignment:
Q  39 agaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||||||| ||||||||||||    
T  582 agaatcagattct-gtagagttttgttcatcaatctaaggtaagggtgaggctaactctcaat 643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 11720 - 11659
Alignment:
Q  64 ttcatcgatctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    |||||| ||||||||||||||||||||||||||||||||||| |  | ||||||||||||||    
T  11720 ttcatcaatctaaggtaagggtgagactaactctcaatgattttagattatataacttctga 11659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 25487 - 25548
Alignment:
Q  39 agaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    ||||||||||| | |||||| |||||||||| |||||||||||||||||| ||||||||||||    
T  25487 agaatcagattct-gtagagttttgttcatcaatctaaggtaagggtgaggctaactctcaat 25548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 3641 - 3694
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagact 91  Q
    ||||||||||||| | |||||||||| ||||||||||||||||||||||||||||    
T  3641 ggagaatcagattct-gtagagctttcttcatcgatctaaggtaagggtgagact 3694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 11603 - 11654
Alignment:
Q  39 agaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagact 91  Q
    ||||||||||| | |||||| ||| ||||||||||||||||||||||||||||    
T  11603 agaatcagattct-gtagagatttattcatcgatctaaggtaagggtgagact 11654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 14664 - 14730
Alignment:
Q  345 ttgttgttgttgatgcatgttttatg-ttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    ||||||||||||||| |||||||||| ||||||||||| |||| |||||||| | ||||||||||||    
T  14664 ttgttgttgttgatggatgttttatgtttcctttagatacctagttgtatataggacctataaacat 14730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 14398 - 14452
Alignment:
Q  76 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 14452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0696 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0696
Description:

Target: scaffold0696; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 3419 - 3354
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatg 102  Q
    |||||| | |||||||| ||||||||||||||| |   ||||||||||||||||||||||||||||    
T  3419 ggagaaactgatttttgaagagctttgttcatcaaatcaaggtaagggtgagactaactctcaatg 3354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 111703 - 111638
Alignment:
Q  331 tggaatgaactg-aattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatat 395  Q
    |||||||| ||| |||||||||||||||||  |||||| |||||||||||||||||| ||||||||    
T  111703 tggaatgatctgtaattgttgttgttgatggctgttttgtgttcctttagatgcctagttgtatat 111638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 111938 - 111885
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaa 126  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||    
T  111938 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 111885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 52292 - 52228
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| ||||||||| |||||||||||||| ||  |||||||| ||||| ||||||||||||    
T  52292 ggagaatctgatttttgttgagctttgttcatcaattcaaggtaagagtgaggctaactctcaat 52228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 67790 - 67704
Alignment:
Q  35 gaggagaatcagatttt-tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    ||||||||||||||||| ||||||| ||||||| || |||      |||||||||||||||||||||||||| |  | ||||||||||||||    
T  67790 gaggagaatcagattttctgtagagttttgttcttcaatc-----aaagggtgagactaactctcaatgattatagattatataacttctga 67704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 30054 - 30007
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctca 99  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  30054 tgtagagctttgttcatcaatctatggtaagggtgagactaacactca 30007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 35519 - 35472
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctca 99  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  35519 tgtagagctttgttcatcaatctatggtaagggtgagactaacactca 35472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 678 - 602
Alignment:
Q  49 ttttgtagagctttg-ttcatcgatctaaggtaagggtgagactaactctcaatgattgtaa--tatataacttctga 123  Q
    ||||||||||||||| |||||  || |||||||||||||||||||||||||||| ||| |||  ||||||||||||||    
T  678 ttttgtagagctttgattcataaat-taaggtaagggtgagactaactctcaataattataaattatataacttctga 602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 750 - 807
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  750 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 10798 - 10859
Alignment:
Q  325 gattgttggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgccta 386  Q
    ||||||||||||||  ||||||| ||||||| |||||| |||| ||||||||| ||||||||    
T  10798 gattgttggaatgagttgaattgatgttgttaatgcatattttgtgttcctttcgatgccta 10859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 11397 - 11340
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  11397 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 11340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 11144 - 11065
Alignment:
Q  331 tggaatgaactgaattgttgttgttgatgcatgttttatgttcctttagatgcctaattgtatattgaacctataaacat 410  Q
    |||| ||| ||| ||||||||||||||||  |||||    |||||||||||||||| |||||||| |||||| |||||||    
T  11144 tggattgatctgtattgttgttgttgatggctgtttgtgtttcctttagatgcctagttgtatatggaacctgtaaacat 11065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 18922 - 18873
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||||||||||||| ||| |||||||||||||| |||||| |||||    
T  18922 tgtagagctttgttcatcaatcaaaggtaagggtgaggctaactttcaat 18873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1555 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1555
Description:

Target: scaffold1555; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 251 - 208
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaa 81  Q
    ||||||||||||| | |||||||||||||||||||||||||||||    
T  251 ggagaatcagattct-gtagagctttgttcatcgatctaaggtaa 208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 5856 - 5912
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaatt 128  Q
    ||||||||||||||| || || || ||||||||| |||||||||| |||||||||||    
T  5856 tctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaatt 5912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 10675 - 10738
Alignment:
Q  37 ggagaatcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaat 101  Q
    |||||||| |||||| ||||||||| ||||||| ||  |||||||||||||| ||||||||||||    
T  10675 ggagaatctgattttcgtagagctt-gttcatcaattcaaggtaagggtgaggctaactctcaat 10738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 1545 - 1490
Alignment:
Q  48 tttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    |||| |||||||||||||| || || ||||||||||||||||||| |||||||||||    
T  1545 ttttggtagagctttgttcttcaat-taaggtaagggtgagactatctctcaatgat 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 10876 - 10916
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  10876 tgtagagctttgttcatcaatctaaggtaagggtgggacta 10916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 2845 - 2896
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgt--aatatataacttctga 123  Q
    |||||||||||||||||||||||||||||||| |  | ||||||||||||||    
T  2845 taaggtaagggtgagactaactctcaatgattttagattatataacttctga 2896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 507
Target Start/End: Complemental strand, 5796 - 5729
Alignment:
Q  439 gttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcga 507  Q
    ||||||||||||||| || ||||| | ||||| ||| |||| ||||||| |||||||||||||||||||    
T  5796 gttttgggtgaaaaagggttgaaacccgtaacattt-ttctgcagaattatgaatggtcgcttaagcga 5729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 11300 - 11340
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  11300 tgtagagctttgttcatcaatctaaggtaagggtgggacta 11340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 15700 - 15740
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  15700 tgtagagctttgttcatcaatctaaggtaagggtgggacta 15740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 507
Target Start/End: Original strand, 70714 - 70781
Alignment:
Q  439 gttttgggtgaaaaatgggtgaaaactgtaacttttgttctccagaattttgaatggtcgcttaagcga 507  Q
    ||||||||||||||| || ||||| | ||||| ||| |||| ||||||| |||||||||||||||||||    
T  70714 gttttgggtgaaaaagggttgaaacccgtaacattt-ttctgcagaattatgaatggtcgcttaagcga 70781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 73 - 105
Target Start/End: Complemental strand, 106053 - 106021
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||||||||||||||||||||||||||    
T  106053 ctaaggtaagggtgagactaactctcaatgatt 106021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 189805 - 189750
Alignment:
Q  49 ttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    ||||||| ||||||||||||| |   |||||||||||||||| |||||||||||||    
T  189805 ttttgtatagctttgttcatcaaatcaaggtaagggtgagaccaactctcaatgat 189750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 533 - 579
Target Start/End: Complemental strand, 2239 - 2193
Alignment:
Q  533 ctgatgaatgcacgcttaagcgagctggtaagcgtgcagtcacagta 579  Q
    ||||||| || || |||||||| ||||||||||||||||||||||||    
T  2239 ctgatgactggacacttaagcgtgctggtaagcgtgcagtcacagta 2193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 8578 - 8544
Alignment:
Q  71 atctaaggtaagggtgagactaactctcaatgatt 105  Q
    |||||||||||||||||| ||||||||||||||||    
T  8578 atctaaggtaagggtgaggctaactctcaatgatt 8544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 13893 - 13947
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaa 126  Q
    ||||||||||||||| || || || ||||||||| |||||||||| |||||||||    
T  13893 tctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 13947  T

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Target: scaffold0141 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 34093 - 34031
Alignment:
Q  43 tcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||  ||| || |||||| |||||||||||||||||| ||||||  ||||||||    
T  34093 tcagatttttgttaagcattattcatcaatctaaggtaagggtgaggctaacttgcaatgatt 34031  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 25219 - 25185
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtg 86  Q
    |||||||||||||||||| ||||||||||||||||    
T  25219 tgtagagctttgttcatcaatctaaggtaagggtg 25185  T

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Target: scaffold0098; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 36089 - 36055
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtg 86  Q
    |||||||||||||||||| ||||||||||||||||    
T  36089 tgtagagctttgttcatcaatctaaggtaagggtg 36055  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 80719 - 80781
Alignment:
Q  43 tcagatttttgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgatt 105  Q
    ||||||||||||  ||| || |||||| |||||||||||||||||| ||||||  ||||||||    
T  80719 tcagatttttgttaagcattattcatcaatctaaggtaagggtgaggctaacttgcaatgatt 80781  T

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Target: scaffold0485 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 3801 - 3768
Alignment:
Q  71 atctaaggtaagggtgagactaactctcaatgat 104  Q
    |||||||||||||||||| |||||||||||||||    
T  3801 atctaaggtaagggtgaggctaactctcaatgat 3768  T

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Target: scaffold0456 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 987 - 930
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||  |||||||||||||    
T  987 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattga 930  T

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Target: scaffold0456; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 8132 - 8075
Alignment:
Q  73 ctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 130  Q
    |||||||||||||||||||| |||||||| ||  |||| ||||  |||||||||||||    
T  8132 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattga 8075  T

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Target: scaffold0720 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 3401 - 3457
Alignment:
Q  72 tctaaggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaatt 128  Q
    |||||||||||||||| | || || ||||||| | |||||||||| |||||||||||    
T  3401 tctaaggtaagggtgatattatctttcaatgaatttaatatataatttctgaaaatt 3457  T

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Target: scaffold0601 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 435
Target Start/End: Original strand, 1233 - 1273
Alignment:
Q  395 ttgaacctataaacattctttggaaacatgtttgggcattg 435  Q
    ||||||||||| ||| ||||||||||||| |||||||||||    
T  1233 ttgaacctatatacaatctttggaaacatatttgggcattg 1273  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 11681 - 11630
Alignment:
Q  74 taaggtaagggtgagactaactctcaatgattgtaa--tatataacttctga 123  Q
    |||||||||||||||||||||||||||| ||| |||  ||||||| ||||||    
T  11681 taaggtaagggtgagactaactctcaataattataaattatataatttctga 11630  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 209934 - 209894
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagacta 92  Q
    |||||||||||||||||| || ||||||||||||| |||||    
T  209934 tgtagagctttgttcatcaatgtaaggtaagggtgggacta 209894  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 20779 - 20831
Alignment:
Q  52 tgtagagctttgttcatcgatctaaggtaagggtgagactaactctcaatgat 104  Q
    ||||||| ||||| | || ||||||||||||||||||  ||||||||||||||    
T  20779 tgtagagttttgtccttcaatctaaggtaagggtgaggttaactctcaatgat 20831  T

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