View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20128_high_10 (Length: 236)
Name: NF20128_high_10
Description: NF20128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20128_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 12 - 221
Target Start/End: Original strand, 36608154 - 36608363
Alignment:
| Q |
12 |
caaaggaacaacagcaatctgagcagaaatggctgtaatagtgagaggttctgttctgtaccagaaaaactggtttaggaatgataataggacacatgaa |
111 |
Q |
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| T |
36608154 |
caaaggaacaacagcaatctgagcagaaatggctgtaatagtgagaggttctgttctgtaccagaaaaactggtttaggaatgataataggacacatgaa |
36608253 |
T |
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| Q |
112 |
agggttcctaatacccacattcggaatgttagaactggtagagaagggtcatctgttgttggcaccgttagagccacttgtttgatgggagaattttcct |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36608254 |
agggttcctaatacccacattcggaatgttagaactggtagagaagggtcatctgttgttggcaccgttagagccacttgtttgatgggagaattttcct |
36608353 |
T |
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| Q |
212 |
ctgattcatt |
221 |
Q |
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|||| ||||| |
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| T |
36608354 |
ctgaatcatt |
36608363 |
T |
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