View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20128_high_8 (Length: 295)
Name: NF20128_high_8
Description: NF20128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20128_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 2 - 268
Target Start/End: Complemental strand, 36084438 - 36084172
Alignment:
| Q |
2 |
ggcaacaccaaaaagatcatatgatcagcaacaacaactacagattgtgcaacatgtgaagaattcaggaatgattaacaacatccagagtccaagaaga |
101 |
Q |
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| T |
36084438 |
ggcaacaccaaaaagatcatatgatcagcaacaacaactacagattgtgcaacatgtgaagaattcaggaatgattaacaacatccagagtccaagaaga |
36084339 |
T |
|
| Q |
102 |
gatgaaaaggaagaggaaatgtcaagatcagttctagcaatgtttagagaaaaggaagaagaaattgagagaagaaagttggaggttagagataaggttc |
201 |
Q |
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| T |
36084338 |
gatgaaaaggaagaggaaatgtcaagatcagttctagcaatgtttagagaaaaggaagaagaaattgagagaagaaagttggaggttagagataaggttc |
36084239 |
T |
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| Q |
202 |
atgctcatctcggtcgagtcgaaaaggaaacaaagcgattggctgagataagagaagtaagtccaat |
268 |
Q |
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| T |
36084238 |
atgctcatctcggtcgagtcgaaaaggaaacaaagcgattggctgagataagagaagtaagtccaat |
36084172 |
T |
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