View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20128_low_9 (Length: 308)
Name: NF20128_low_9
Description: NF20128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20128_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 9417926 - 9418222
Alignment:
| Q |
1 |
ttggttttgcatctttctctgctgtcctgtttactcttgaatcgattagtatcgaagcatcacaaccctaaaatcaaaaagtataaaatgtgtgagcaat |
100 |
Q |
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| T |
9417926 |
ttggttttgcatctttctctgctgtcctgtttactcttgaatcgattagtatcgaagcatcacaaccctaaaataaaaaagtataaaatgtgtgagcaat |
9418025 |
T |
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| Q |
101 |
tttcattcctttgtatatattgcatactaaatttaattttgattgaacttcctttcaatagctcagaaaattcatgcaaacacacaattgtccatatttt |
200 |
Q |
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| T |
9418026 |
tttaattccattgtatatattgcatactaaatttaattttgattgaacttcctttcaatagctcagaaaattcatgcaaacacacaattgtccatatttt |
9418125 |
T |
|
| Q |
201 |
aattaggtttggtaaaataaatttaaagaaacttaaaaacaaactcaaatataaattatttgatcttgatcgaacgataccaacatattgatttcat |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9418126 |
aattaggtttggtaaaataaatttaaagaaacttaaaaacaaactcaaatataaattatttgatcttgatcgaacgataccaacatattgatttcat |
9418222 |
T |
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