View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20137_high_16 (Length: 233)
Name: NF20137_high_16
Description: NF20137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20137_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 32096280 - 32096498
Alignment:
| Q |
1 |
tagccctcaactccgcaacaaaaacaccattattaagcgaagattgaactccaataacctcaatcctcaactccctcaacattaccataacatcaagcaa |
100 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
32096280 |
tagccctcaactccgcaacaaaaacaccattattaagcgaagattgaactccaataacctcaatcctcaactccctcaacattaccataacgtcaagcaa |
32096379 |
T |
|
| Q |
101 |
caatccttctctatgcaaacactcaatctccaacaaagcatcactctcaataatcgaaacctgaaccgacgaaacaacctccgtctcaactgctttcgct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
32096380 |
caatccttctctatgcaaacactcaatctccaacaaagcatcactctcaataatcgaaacctgaaccgacgaaacaacctccgtctcaactgctttcgct |
32096479 |
T |
|
| Q |
201 |
ctcgtggctccacactctt |
219 |
Q |
| |
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||||||||||||||||||| |
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| T |
32096480 |
ctcgtggctccacactctt |
32096498 |
T |
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