View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20138_high_3 (Length: 750)

Name: NF20138_high_3
Description: NF20138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20138_high_3
NF20138_high_3
[»] chr1 (26 HSPs)
chr1 (651-734)||(42155659-42155742)
chr1 (16-104)||(17543370-17543458)
chr1 (18-124)||(20033375-20033481)
chr1 (13-122)||(15571941-15572050)
chr1 (11-124)||(16114534-16114647)
chr1 (25-106)||(44796869-44796950)
chr1 (15-106)||(15811699-15811790)
chr1 (11-86)||(9783230-9783305)
chr1 (15-98)||(35133644-35133727)
chr1 (11-93)||(24282766-24282848)
chr1 (23-106)||(23035181-23035264)
chr1 (20-124)||(21848366-21848470)
chr1 (18-74)||(27911848-27911904)
chr1 (23-106)||(15527058-15527141)
chr1 (11-122)||(16363358-16363469)
chr1 (18-124)||(12262355-12262459)
chr1 (38-124)||(14235561-14235647)
chr1 (16-82)||(15542564-15542630)
chr1 (23-93)||(26647618-26647688)
chr1 (11-112)||(25959708-25959808)
chr1 (11-107)||(12011434-12011530)
chr1 (16-107)||(16786349-16786440)
chr1 (11-122)||(18100026-18100137)
chr1 (16-79)||(21663346-21663409)
chr1 (13-122)||(16113267-16113376)
chr1 (18-131)||(24464343-24464456)
[»] chr5 (23 HSPs)
chr5 (11-133)||(19761830-19761952)
chr5 (11-163)||(24188583-24188735)
chr5 (17-131)||(23266553-23266667)
chr5 (15-124)||(26117171-26117280)
chr5 (18-131)||(28254628-28254741)
chr5 (60-132)||(24849787-24849859)
chr5 (15-127)||(26122139-26122251)
chr5 (16-124)||(26253204-26253312)
chr5 (11-139)||(26314940-26315068)
chr5 (18-129)||(107915-108026)
chr5 (11-122)||(17469808-17469918)
chr5 (15-106)||(18831974-18832065)
chr5 (20-131)||(24261799-24261910)
chr5 (11-131)||(24162261-24162381)
chr5 (11-87)||(18227383-18227459)
chr5 (11-121)||(25572712-25572822)
chr5 (11-87)||(24265529-24265605)
chr5 (11-87)||(24342160-24342236)
chr5 (16-113)||(25920577-25920674)
chr5 (18-105)||(24807450-24807537)
chr5 (61-106)||(34488608-34488653)
chr5 (19-131)||(17831420-17831532)
chr5 (11-80)||(22846046-22846115)
[»] scaffold1017 (1 HSPs)
scaffold1017 (18-160)||(298-439)
[»] chr2 (34 HSPs)
chr2 (11-139)||(27420791-27420919)
chr2 (11-132)||(17891456-17891577)
chr2 (12-132)||(18553022-18553143)
chr2 (10-133)||(22627111-22627234)
chr2 (11-122)||(25883591-25883702)
chr2 (38-122)||(45572644-45572727)
chr2 (38-122)||(45576311-45576394)
chr2 (38-122)||(45579978-45580061)
chr2 (38-122)||(45583645-45583728)
chr2 (38-122)||(45587312-45587395)
chr2 (38-122)||(45590979-45591062)
chr2 (38-122)||(45594646-45594729)
chr2 (38-122)||(45598313-45598396)
chr2 (38-122)||(45601980-45602063)
chr2 (38-122)||(45605647-45605730)
chr2 (38-122)||(45609314-45609397)
chr2 (38-122)||(45612981-45613064)
chr2 (38-122)||(45616648-45616731)
chr2 (16-106)||(19198731-19198821)
chr2 (77-139)||(27419645-27419707)
chr2 (14-86)||(32086799-32086871)
chr2 (11-85)||(11464565-11464639)
chr2 (11-100)||(26651885-26651974)
chr2 (16-85)||(28930046-28930115)
chr2 (19-87)||(25938320-25938388)
chr2 (22-126)||(27871027-27871131)
chr2 (19-122)||(36191325-36191428)
chr2 (18-124)||(32438937-32439043)
chr2 (11-87)||(29850790-29850866)
chr2 (18-122)||(34369063-34369167)
chr2 (16-87)||(24346321-24346392)
chr2 (11-125)||(20175545-20175659)
chr2 (42-127)||(16157355-16157440)
chr2 (78-127)||(18971037-18971086)
[»] chr8 (23 HSPs)
chr8 (16-131)||(24518842-24518957)
chr8 (11-132)||(24381576-24381697)
chr8 (11-115)||(24380603-24380707)
chr8 (11-124)||(30487580-30487693)
chr8 (11-122)||(7984851-7984962)
chr8 (21-106)||(22501586-22501671)
chr8 (10-139)||(5856500-5856628)
chr8 (16-105)||(14271594-14271683)
chr8 (11-122)||(30117908-30118017)
chr8 (23-104)||(6886423-6886504)
chr8 (18-105)||(24851191-24851278)
chr8 (11-122)||(25180972-25181082)
chr8 (13-122)||(15058755-15058863)
chr8 (11-124)||(19785030-19785143)
chr8 (16-104)||(14076876-14076964)
chr8 (19-87)||(18007314-18007382)
chr8 (16-79)||(15176687-15176750)
chr8 (11-85)||(34499062-34499136)
chr8 (13-106)||(2638471-2638564)
chr8 (16-76)||(24091131-24091191)
chr8 (82-123)||(24905790-24905831)
chr8 (16-85)||(23868085-23868155)
chr8 (11-85)||(37527274-37527348)
[»] chr4 (28 HSPs)
chr4 (11-123)||(16669971-16670083)
chr4 (11-124)||(23083435-23083548)
chr4 (11-132)||(25024833-25024953)
chr4 (11-86)||(26114451-26114526)
chr4 (11-107)||(1832303-1832399)
chr4 (11-122)||(10236325-10236436)
chr4 (11-106)||(19093998-19094093)
chr4 (11-125)||(18447689-18447803)
chr4 (11-123)||(9849957-9850070)
chr4 (11-87)||(17277617-17277693)
chr4 (18-118)||(19547308-19547408)
chr4 (16-79)||(8968327-8968390)
chr4 (61-124)||(12836307-12836370)
chr4 (11-104)||(23975604-23975697)
chr4 (22-121)||(8140205-8140304)
chr4 (16-79)||(17711084-17711147)
chr4 (15-106)||(20828392-20828483)
chr4 (20-83)||(22345852-22345915)
chr4 (11-105)||(5685391-5685485)
chr4 (11-107)||(9053757-9053853)
chr4 (11-107)||(9263568-9263664)
chr4 (19-79)||(11782258-11782318)
chr4 (11-107)||(15047524-15047620)
chr4 (11-107)||(15106804-15106900)
chr4 (11-71)||(19927075-19927135)
chr4 (11-106)||(5691507-5691602)
chr4 (27-122)||(19562302-19562397)
chr4 (18-131)||(17661677-17661789)
[»] chr7 (38 HSPs)
chr7 (11-122)||(15171013-15171124)
chr7 (11-196)||(5485288-5485472)
chr7 (11-132)||(21233829-21233950)
chr7 (11-122)||(9767520-9767631)
chr7 (11-106)||(1588989-1589084)
chr7 (11-154)||(6039547-6039690)
chr7 (11-124)||(15611288-15611401)
chr7 (11-106)||(9501764-9501859)
chr7 (11-106)||(3736090-3736185)
chr7 (11-105)||(3189588-3189682)
chr7 (18-124)||(20175828-20175934)
chr7 (11-131)||(144702-144823)
chr7 (11-122)||(10418292-10418403)
chr7 (13-92)||(21428562-21428641)
chr7 (15-124)||(7399072-7399181)
chr7 (11-123)||(5221218-5221330)
chr7 (11-83)||(8317330-8317402)
chr7 (11-86)||(8309987-8310062)
chr7 (23-106)||(19154588-19154671)
chr7 (23-106)||(20753987-20754070)
chr7 (21-131)||(4900580-4900690)
chr7 (18-124)||(13281985-13282090)
chr7 (18-87)||(24751454-24751523)
chr7 (18-130)||(2455070-2455182)
chr7 (11-107)||(9288661-9288756)
chr7 (23-87)||(10991227-10991291)
chr7 (11-71)||(17831029-17831089)
chr7 (19-79)||(25692567-25692627)
chr7 (16-122)||(1810640-1810746)
chr7 (17-87)||(5471987-5472057)
chr7 (11-85)||(10585436-10585510)
chr7 (23-98)||(1585953-1586028)
chr7 (16-79)||(3585779-3585842)
chr7 (16-87)||(9917937-9918008)
chr7 (16-87)||(9925849-9925920)
chr7 (13-83)||(6018132-6018202)
chr7 (60-106)||(18201787-18201833)
chr7 (73-122)||(11781601-11781650)
[»] chr3 (24 HSPs)
chr3 (11-133)||(820095-820217)
chr3 (11-122)||(22470655-22470766)
chr3 (15-103)||(18735524-18735612)
chr3 (11-122)||(28326383-28326494)
chr3 (16-122)||(27853170-27853276)
chr3 (11-106)||(20886621-20886716)
chr3 (23-132)||(3114971-3115081)
chr3 (11-132)||(20891893-20892014)
chr3 (11-124)||(6075705-6075818)
chr3 (11-138)||(19388100-19388228)
chr3 (11-106)||(23054826-23054921)
chr3 (11-107)||(13906833-13906929)
chr3 (11-105)||(17134845-17134938)
chr3 (11-105)||(22246750-22246844)
chr3 (12-133)||(6292092-6292205)
chr3 (19-131)||(8448528-8448640)
chr3 (18-124)||(25530985-25531091)
chr3 (18-107)||(5271063-5271152)
chr3 (16-105)||(5509822-5509911)
chr3 (16-85)||(34276695-34276764)
chr3 (23-98)||(16223251-16223326)
chr3 (16-81)||(19912355-19912420)
chr3 (22-79)||(20431249-20431306)
chr3 (16-85)||(31284551-31284620)
[»] scaffold0043 (1 HSPs)
scaffold0043 (15-166)||(88690-88842)
[»] chr6 (21 HSPs)
chr6 (48-212)||(19722063-19722226)
chr6 (11-131)||(8246353-8246473)
chr6 (11-131)||(23644568-23644688)
chr6 (11-122)||(9898118-9898229)
chr6 (18-131)||(10821964-10822077)
chr6 (11-131)||(21687379-21687499)
chr6 (11-86)||(6629224-6629299)
chr6 (8-106)||(21060650-21060748)
chr6 (8-106)||(21079967-21080065)
chr6 (11-125)||(30355996-30356110)
chr6 (21-131)||(32759696-32759806)
chr6 (16-131)||(3357869-3357984)
chr6 (11-122)||(19246012-19246123)
chr6 (19-113)||(10504926-10505020)
chr6 (16-82)||(22404509-22404575)
chr6 (18-75)||(9387400-9387457)
chr6 (22-126)||(21547028-21547134)
chr6 (61-106)||(22569608-22569653)
chr6 (11-70)||(9339227-9339286)
chr6 (11-85)||(8038301-8038375)
chr6 (16-76)||(12991473-12991533)
[»] scaffold0451 (1 HSPs)
scaffold0451 (11-122)||(10342-10453)
[»] scaffold0360 (1 HSPs)
scaffold0360 (13-118)||(16718-16822)
[»] scaffold0094 (1 HSPs)
scaffold0094 (29-107)||(6200-6278)
[»] scaffold0136 (1 HSPs)
scaffold0136 (10-122)||(14036-14148)
[»] scaffold0386 (2 HSPs)
scaffold0386 (11-122)||(5085-5196)
scaffold0386 (11-106)||(13725-13819)
[»] scaffold0086 (2 HSPs)
scaffold0086 (18-131)||(13050-13163)
scaffold0086 (16-104)||(11847-11935)
[»] scaffold0015 (1 HSPs)
scaffold0015 (16-93)||(202087-202164)
[»] scaffold0024 (1 HSPs)
scaffold0024 (11-106)||(41090-41185)
[»] scaffold0111 (1 HSPs)
scaffold0111 (16-78)||(21256-21318)
[»] scaffold0002 (1 HSPs)
scaffold0002 (20-82)||(95399-95461)
[»] scaffold1339 (1 HSPs)
scaffold1339 (61-122)||(1023-1084)


Alignment Details
Target: chr1 (Bit Score: 84; Significance: 2e-39; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 651 - 734
Target Start/End: Original strand, 42155659 - 42155742
Alignment:
Q  651 tagcattagaaacagctttcaactttaccataagatttgcaagctcagattctacaagtttccttgtcgcttgaaccacttgac 734  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42155659 tagcattagaaacagctttcaactttaccataagatttgcaagctcagattctacaagtttccttgtcgcttgaaccacttgac 42155742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 17543370 - 17543458
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaaca 104  Q
    |||||||||||||||| |||  ||||| ||| |||||||| |||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  17543370 aagaatgaagattcaataggtctcagacgacgttacagagggatgaattttgttcccaagttccaagacatcttacatagaaacaaaca 17543458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 20033375 - 20033481
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    ||||||||||||||||||| |||||||||||| || || ||  |||||||||| ||||| |||||||||| || ||  |||||||||||| ||||| |||    
T  20033375 gaatgaagattcaagaggcctcagaagacatttcaaagggagaaattatgttctcaagtcccaagacatcttatattaaagcaaacacccaaaaagacga 20033474  T
Q  118 agaaaca 124  Q
    |||||||    
T  20033475 agaaaca 20033481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 15571941 - 15572050
Alignment:
Q  13 atgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaa 112  Q
    |||||||||||||||||||||||||||| ||||  ||||| || || ||||| ||||||||||||| |||||||| ||||| |||| |||||||  |  |    
T  15571941 atgaagaatgaagattcaagaggcatcaaaagagtttacacagggaggaattctgttcccaagttcgaagacatcttacattgaagaaaacacctcacca 15572040  T
Q  113 ggcgaagaaa 122  Q
    ||||||||||    
T  15572041 ggcgaagaaa 15572050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 16114647 - 16114534
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| | ||||||| ||||| || ||  | || |||||||||||||||||||||| ||||| |||| ||||||   ||    
T  16114647 agatgaagaatgaagattcaagaggccttagaagactttacaaagggagtatttttgttcccaagttccaagacatcttacattgaagtaaacacttaaa 16114548  T
Q  111 aaggcgaagaaaca 124  Q
    |||| |||||||||    
T  16114547 aaggtgaagaaaca 16114534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 44796950 - 44796869
Alignment:
Q  25 gattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    |||||||||||| ||||||||| |||||||| || |||||||||||||||||||||||||||| || || |||| |||||||    
T  44796950 gattcaagaggcctcagaagacgttacagagggaggaattatgttcccaagttccaagacatcttatattgaagaaaacacc 44796869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 15811699 - 15811790
Alignment:
Q  15 gaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    ||||| |||||||| ||||||| ||| ||||| |||||||| |  |||||||||||||||||||||||||||| ||||| |||| |||||||    
T  15811699 gaagattgaagatttaagaggcctcataagacgttacagagggtggaattatgttcccaagttccaagacatcttacattgaaggaaacacc 15811790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 9783230 - 9783305
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacat 86  Q
    ||||||| ||||||| |||||||||| ||| ||||| |||||||| || ||||| |||||||||||||||||||||    
T  9783230 agatgaaaaatgaaggttcaagaggcctcataagactttacagagggaggaattttgttcccaagttccaagacat 9783305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 35133727 - 35133644
Alignment:
Q  15 gaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaag 98  Q
    ||||| |||| ||||||||||| ||||||||| ||||| || |  |||||||||||||||||||||||||||| ||||| ||||    
T  35133727 gaagattgaatattcaagaggcctcagaagacgttacaaagggtagaattatgttcccaagttccaagacatcttacattgaag 35133644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 24282848 - 24282766
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacat 93  Q
    |||||||||||||| ||||||||||| ||| ||||| ||||| || || |||||||||||||||||| ||| ||||| |||||    
T  24282848 agatgaagaatgaatattcaagaggcctcataagactttacaaagggaggaattatgttcccaagttacaatacatcttacat 24282766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 23035181 - 23035264
Alignment:
Q  23 aagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    ||||||||||| || ||| ||||| ||||| |  || |||||||||||||||||||||||||||| ||||| |||| |||||||    
T  23035181 aagattcaagatgcctcataagacgttacaaaaggaggaattatgttcccaagttccaagacatcttacattgaagaaaacacc 23035264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 21848470 - 21848366
Alignment:
Q  20 atgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaag 119  Q
    |||||||||||||| || ||| ||||| ||||| || |  ||||| ||||||||||||||||| || | |||| | ||||||| ||  ||||||||||||    
T  21848470 atgaagattcaagatgcctcaaaagactttacaaagggtggaattttgttcccaagttccaaggcaacttacacataagcaaatacttgaaaaggcgaag 21848371  T
Q  120 aaaca 124  Q
    |||||    
T  21848370 aaaca 21848366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 27911904 - 27911848
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaa 74  Q
    ||||||||||||||||||| ||||||||||||||| | ||| ||||| |||||||||    
T  27911904 gaatgaagattcaagaggcctcagaagacattacaaacagaggaattttgttcccaa 27911848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 15527058 - 15527141
Alignment:
Q  23 aagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    |||| ||||||||  |||| |||| |||||||| || ||||||||||||||||||||||| |||  ||||| |||| |||||||    
T  15527058 aagactcaagaggtctcagcagacgttacagagggaggaattatgttcccaagttccaagtcattttacattgaagaaaacacc 15527141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 16363469 - 16363358
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||| |||||||||||||| | |||| | ||||||| |||||||| ||  |||| | |||||||||||||| ||||| ||||  |||||||||||   ||    
T  16363469 agattaagaatgaagattctataggccttagaagactttacagagggagaaattcttttcccaagttccaatacatcttacaatgaagcaaacacattaa 16363370  T
Q  111 aaggcgaagaaa 122  Q
    ||||||| ||||    
T  16363369 aaggcgaggaaa 16363358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 12262355 - 12262459
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    |||||||||||||| ||||||| ||||| |||||| || || |||||||| |||||||| |||||||||| || || || | |||||||| ||| | |||    
T  12262355 gaatgaagattcaaaaggcatcggaagatattacaaagggaagaattatg-tcccaagtcccaagacatcttatatggacggaaacaccc-aaaggacga 12262452  T
Q  118 agaaaca 124  Q
    |||||||    
T  12262453 agaaaca 12262459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 14235561 - 14235647
Alignment:
Q  38 tcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaaca 124  Q
    |||| ||||||||||||| || |||||||||| ||||||  ||||||||| || || ||||||||||||| ||| |  |||||||||    
T  14235561 tcaggagacattacagagggaggaattatgttgccaagtctcaagacatcttatatggaagcaaacacccaaaaggatgaagaaaca 14235647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 15542564 - 15542630
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaag 82  Q
    ||||||||||||||||||||| |||  |||| ||||| || || || ||||||||||||||||||||    
T  15542564 aagaatgaagattcaagaggcctcaagagactttacatagggaggacttatgttcccaagttccaag 15542630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 26647618 - 26647688
Alignment:
Q  23 aagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacat 93  Q
    |||||||||||||| ||| ||||| |||||||| || ||||| |||||||| ||||||| ||||| |||||    
T  26647618 aagattcaagaggcctcataagacgttacagagggaggaattttgttcccatgttccaacacatcttacat 26647688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 25959708 - 25959808
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| | | ||||| ||| | || || ||||| | ||| |||||| ||||||||| ||||| |||| ||||||| |||    
T  25959708 agatgaagaatgaagattcaagaggcct-aaaagactttataaagggaggaattcttttctcaagtttcaagacatcttacattgaagaaaacacctgaa 25959806  T
Q  111 aa 112  Q
    ||    
T  25959807 aa 25959808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 12011434 - 12011530
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacaccc 107  Q
    |||| |||||||||||||||| |||| ||| ||||| ||||||||  | ||||| ||||| || || |||||||| | || || |||||||||||||    
T  12011434 agatcaagaatgaagattcaataggcctcaaaagactttacagaggaaggaattttgttctcaggtcccaagacaacttatatggaagcaaacaccc 12011530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 16786349 - 16786440
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacaccc 107  Q
    |||||||||||||||| || | ||| ||||| |||||||| ||  ||||||||| ||| || |||| ||||| || || |||||||||||||    
T  16786349 aagaatgaagattcaaaagacctcataagactttacagagggagaaattatgtttccaggtcccaatacatcttatatggaagcaaacaccc 16786440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 18100026 - 18100137
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||| | |  | |||| ||||| || || ||||| |  ||||||||||||||||||  ||| | |||| |||||||  ||    
T  18100026 agatgaagaatgaagattcaagagccctatgtagactttacaaagggaagaattctcctcccaagttccaagacattttactttgaagaaaacacctcaa 18100125  T
Q  111 aaggcgaagaaa 122  Q
     |||||||||||    
T  18100126 caggcgaagaaa 18100137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 21663346 - 21663409
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttcc 79  Q
    ||||||||||||||||||||| |||  |||| ||||| || || ||||| ||||||||||||||    
T  21663346 aagaatgaagattcaagaggcctcacgagactttacatagggaggaattctgttcccaagttcc 21663409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 16113376 - 16113267
Alignment:
Q  13 atgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaa 112  Q
    |||||||||||| |||||| |||| ||||||||  ||||| || || ||||| ||||| |||||||||  ||||  ||| | |||| |||||||  || |    
T  16113376 atgaagaatgaatattcaataggcctcagaagaatttacaaagggaggaattttgttctcaagttccagtacattttactttgaagaaaacacctcaaca 16113277  T
Q  113 ggcgaagaaa 122  Q
    ||||||||||    
T  16113276 ggcgaagaaa 16113267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 24464456 - 24464343
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    |||| ||||||||||| || ||  ||||||||||| |  || ||||| ||| ||||||| | |||||||  || || ||||||||||||| ||||| ||     
T  24464456 gaataaagattcaagaagcctcgtaagacattacaaatggaggaattttgtacccaagtccaaagacattttatatggaagcaaacaccctaaaagacgt 24464357  T
Q  118 agaaacaagcattt 131  Q
     |||||||||||||    
T  24464356 tgaaacaagcattt 24464343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 2e-36; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 19761830 - 19761952
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||| ||| ||||||||||| ||||||||| |||||||| || |||||||||||||||||||||| ||||||||| ||||||||||||||| ||    
T  19761830 agatgaagaaagaatattcaagaggcctcagaagacgttacagagggaggaattatgttcccaagttccaaaacatcatacttagaagcaaacacccaaa 19761929  T
Q  111 aaggcgaagaaacaagcattttc 133  Q
    ||||| || ||||||||||||||    
T  19761930 aaggcaaataaacaagcattttc 19761952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 11 - 163
Target Start/End: Complemental strand, 24188735 - 24188583
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| ||||||||| ||||| |  ||  |||||||||||||||||| || ||||| |||||| |||||||||||  ||    
T  24188735 agatgaagaatgaagattcaagaggcttcagaagacgttacatatggagaaattatgttcccaagttcgaacacatcttacatataagcaaacacctaaa 24188636  T
Q  111 aaggcgaagaaacaagcattttctgcaccaaacacactcacaagtgcccaagc 163  Q
    ||||||||||||||  ||||||| ||| || |  |||||||| | ||||||||    
T  24188635 aaggcgaagaaacatacattttcagcatcagaggcactcacatgcgcccaagc 24188583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 23266667 - 23266553
Alignment:
Q  17 agaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcg 116  Q
    ||||||||||||||||| || | ||||||| |||||  | || |||||||||||||||||||||||||||| || |||||| ||||||||| |||||  |    
T  23266667 agaatgaagattcaagatgccttagaagaccttacaaggggaagaattatgttcccaagttccaagacatcttatatagaaacaaacacccaaaaagatg 23266568  T
Q  117 aagaaacaagcattt 131  Q
    |||||||| ||||||    
T  23266567 aagaaacatgcattt 23266553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 26117280 - 26117171
Alignment:
Q  15 gaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaagg 114  Q
    ||||||| ||||||||| |||| ||| ||  ||||| |||| || ||||||||||||||||||||| |||||| || ||||||||||||| ||||||| |    
T  26117280 gaagaataaagattcaaaaggcttcaaaaatcattaaagagtgaggaattatgttcccaagttccacgacatcttaaatagaagcaaacatccgaaaatg 26117181  T
Q  115 cgaagaaaca 124  Q
     |||||||||    
T  26117180 tgaagaaaca 26117171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 28254741 - 28254628
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    |||||||||||||| |||| ||| ||||||||||| |  || |||||||||||  ||||||||||||||| ||||| ||||||||||||  |||||  ||    
T  28254741 gaatgaagattcaaaaggcctcataagacattacaaatggaggaattatgttcagaagttccaagacatcttacatggaagcaaacaccaaaaaagatga 28254642  T
Q  118 agaaacaagcattt 131  Q
    |||||||| |||||    
T  28254641 agaaacaaacattt 28254628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 24849787 - 24849859
Alignment:
Q  60 gaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaacaagcatttt 132  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||  ||||||||||||||| ||| ||||    
T  24849787 gaattatgttcccaagtttcaagacatcttacatagaagcaaacacctaaaaaggcgaagaaacgagcgtttt 24849859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 26122251 - 26122139
Alignment:
Q  15 gaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaagg 114  Q
    |||||||||||||||||||||  ||||||||| |||   ||  | |||||||||||||||||||||||| |   ||||||||| ||||||||  ||||||    
T  26122251 gaagaatgaagattcaagaggtgtcagaagactttatgaaggaaggaattatgttcccaagttccaagaaaaattacatagaaacaaacacctaaaaagg 26122152  T
Q  115 cgaagaaacaagc 127  Q
    |||||||||||||    
T  26122151 cgaagaaacaagc 26122139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 26253312 - 26253204
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggc 115  Q
    ||||||||||||||||||| | |||||||| ||||||||| || |||| |||||||||||||  |||||||| || || |||| |||||||  ||||| |    
T  26253312 aagaatgaagattcaagagccctcagaagatattacagagggaggaatgatgttcccaagttataagacatcttatatggaagtaaacacctaaaaagac 26253213  T
Q  116 gaagaaaca 124  Q
    |||||||||    
T  26253212 gaagaaaca 26253204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 26315068 - 26314940
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| ||| ||||| ||||| || ||  |||| |||||| |||||||||| |||  |||||||||||| |||||  ||    
T  26315068 agatgaagaatgaagattcaagaggcctcataagactttacaaagggagaaattttgttcctaagttccaaggcattttacatagaagcagacacctaaa 26314969  T
Q  111 aaggcgaagaaacaagcattttctgcacc 139  Q
    ||  ||||||||||||  ||||| |||||    
T  26314968 aaaacgaagaaacaagtgttttcagcacc 26314940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 107915 - 108026
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    |||||||||||||||||||||||||| |||||||| |  || ||||||||||| ||||| ||| |||||| ||||| ||| ||| ||||| | ||| |||    
T  107915 gaatgaagattcaagaggcatcagaaaacattacaaatggaggaattatgttctcaagtcccatgacatcttacatggaaccaatcacccaataagacga 108014  T
Q  118 agaaacaagcat 129  Q
    ||||||| ||||    
T  108015 agaaacatgcat 108026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 17469808 - 17469918
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    ||||||| |||||||||||||||||| ||| ||||| ||||| || || |||||||||||||||| ||||||||||| | || | || ||||||||  ||    
T  17469808 agatgaaaaatgaagattcaagaggcctcataagactttacaaagggaggaattatgttcccaag-tccaagacatcttgcagaaaaacaaacacctaaa 17469906  T
Q  111 aaggcgaagaaa 122  Q
    ||||||||||||    
T  17469907 aaggcgaagaaa 17469918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 18832065 - 18831974
Alignment:
Q  15 gaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    ||||| |||||||||||||||| ||||||||| |||| ||| || ||||||||||  |||||||||||||||| ||||| |||| |||||||    
T  18832065 gaagattgaagattcaagaggcctcagaagacgttacggagggaggaattatgttatcaagttccaagacatcttacattgaagaaaacacc 18831974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 24261910 - 24261799
Alignment:
Q  20 atgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaag 119  Q
    ||||||||||||||||| ||| ||||| ||||| || || | ||| |  ||||||||| ||||| | | ||||||||||||||||||  |||||||||||    
T  24261910 atgaagattcaagaggcctcataagactttacaaagggaggtattctaatcccaagtttcaagaaaacttacatagaagcaaacacctaaaaaggcgaag 24261811  T
Q  120 aaacaagcattt 131  Q
    ||||||||||||    
T  24261810 aaacaagcattt 24261799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 24162261 - 24162381
Alignment:
Q  11 agatgaagaatgaagattcaaga-ggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccga 109  Q
    ||||||||||||||||||||||| ||| |||||| || ||| | || || |||||  ||||||||||||||||||| | ||||||| ||||||||||  |    
T  24162261 agatgaagaatgaagattcaagaaggcctcagaaaactttaaa-agggaggaatttcgttcccaagttccaagacaacttacataggagcaaacacctaa 24162359  T
Q  110 aaaggcgaagaaacaagcattt 131  Q
    ||||| ||||||||| ||||||    
T  24162360 aaaggtgaagaaacatgcattt 24162381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 18227459 - 18227383
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatc 87  Q
    |||| ||||||||||||||||||| | ||| ||| |||||||||| ||  |||||||||||||||||||||||||||    
T  18227459 agattaagaatgaagattcaagagacctcataaggcattacagagggagaaattatgttcccaagttccaagacatc 18227383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 25572712 - 25572822
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||| ||||||||||||||  || |||||||||||| || || |||||||||||||||||  |||||||   ||| |||||| |||||| ||||    
T  25572712 agatgaagaaggaagattcaagaggtctcggaagacattacaaagggaggaattatgttcccaagtctcaagacactttacgtagaagaaaacactcgaa 25572811  T
Q  111 aaggcgaagaa 121  Q
     |||| |||||    
T  25572812 taggcaaagaa 25572822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 24265529 - 24265605
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatc 87  Q
    |||||||||||||||| |||| |||| ||||||||| ||||| || || ||||| ||||| ||||||||||||||||    
T  24265529 agatgaagaatgaagaatcaaaaggcctcagaagactttacaaagggaggaattttgttcacaagttccaagacatc 24265605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 24342160 - 24342236
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatc 87  Q
    |||||||||||||||| |||| |||| ||||||||| ||||| || || ||||| ||||| ||||||||||||||||    
T  24342160 agatgaagaatgaagaatcaaaaggcctcagaagactttacaaagggaggaattttgttcacaagttccaagacatc 24342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 25920674 - 25920577
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaag 113  Q
    ||||||||||||||||||| | ||| ||||| |||||||| ||  |||||||||||||  | |||||||||| || || |||||||||| || |||||    
T  25920674 aagaatgaagattcaagagacctcataagactttacagagggagaaattatgttcccagatcccaagacatcttatatggaagcaaacatccaaaaag 25920577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 24807450 - 24807537
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacac 105  Q
    |||||||||||||||||||  ||||||| ||||||||| || | ||| ||||||||| | |||||||||| || || |||| ||||||    
T  24807450 gaatgaagattcaagaggccccagaagaaattacagagggagggattgtgttcccaaatcccaagacatcttatatggaagaaaacac 24807537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 34488653 - 34488608
Alignment:
Q  61 aattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    ||||||||||||||||||||||||||| ||||| || |||||||||    
T  34488653 aattatgttcccaagttccaagacatcttacattgacgcaaacacc 34488608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 17831532 - 17831420
Alignment:
Q  19 aatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaa 118  Q
    ||||||| |||||||||| | |||||| |||||| || |   |||| ||||| ||||| ||| |||||| |  || ||||||||||||| ||||| ||||    
T  17831532 aatgaaggttcaagaggccttagaagatattacaaagggggaaattttgttcgcaagtcccatgacatcttgtatggaagcaaacacccaaaaagacgaa 17831433  T
Q  119 gaaacaagcattt 131  Q
    |||||| ||||||    
T  17831432 gaaacatgcattt 17831420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 22846046 - 22846115
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttcca 80  Q
    |||||||||||||| ||||||||||| ||||||||| |  ||||| ||  |||||||||||  |||||||    
T  22846046 agatgaagaatgaaaattcaagaggcttcagaagacttagcagagggagaaattatgttccatagttcca 22846115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1017 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold1017
Description:

Target: scaffold1017; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 439 - 298
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||||||||| |    
T  439 gaatgaagattcaagaggcctcagaagacgttacagaaagatgaattacgttcccaagttcccagacatcttacatagaatcaaacacccgaaaaggc-a 341  T
Q  118 agaaacaagcattttctgcaccaaacacactcacaagtgccca 160  Q
    |||||||  |  |||| |||||| || |||||||||| |||||    
T  340 agaaacagacgatttcagcaccagacgcactcacaagcgccca 298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 6e-33; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 27420919 - 27420791
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||| ||| |||||||||||||||  |  | ||| |||||| ||||||||||||||||| ||||||||||||||||||| ||    
T  27420919 agatgaagaatgaagattcaagtggcctcagaagacattacaagggaaggaagtatgtttccaagttccaagacatcttacatagaagcaaacacccaaa 27420820  T
Q  111 aaggcgaagaaacaagcattttctgcacc 139  Q
    |||||||||||||| || ||||| |||||    
T  27420819 aaggcgaagaaacatgcgttttcagcacc 27420791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 17891577 - 17891456
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| ||| ||||  ||||| |  || ||||||||||| |||||||||||||| | ||||||||||||||||||  ||    
T  17891577 agatgaagaatgaagattcaagaggcctcataagaatttacaaaaggaggaattatgttctcaagttccaagacaacttacatagaagcaaacacctaaa 17891478  T
Q  111 aaggcgaagaaacaagcatttt 132  Q
    |||||||||||||| |||||||    
T  17891477 aaggcgaagaaacatgcatttt 17891456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 18553143 - 18553022
Alignment:
Q  12 gatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaa 111  Q
    |||||||||||||||||||||| || ||||||||| |||||||| ||||| || | ||||||||||||||||||||  | || |||| |||||||  |||    
T  18553143 gatgaagaatgaagattcaagaagcttcagaagactttacagagggatgacttctattcccaagttccaagacatctaatattgaagaaaacacctcaaa 18553044  T
Q  112 aggcgaag-aaacaagcatttt 132  Q
    |||| ||| |||||||||||||    
T  18553043 aggcaaagaaaacaagcatttt 18553022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 22627234 - 22627111
Alignment:
Q  10 gagatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccga 109  Q
    |||||||||||||||||||||| |||| ||| ||||  ||| |||| || ||||| | |||||||||||||||| ||| |||||||||| |||||||  |    
T  22627234 gagatgaagaatgaagattcaataggcctcataagatgttagagagggaggaatttttttcccaagttccaagatatcttacatagaagaaaacacctaa 22627135  T
Q  110 aaaggcgaagaaacaagcattttc 133  Q
    | |||| |||||||| ||||||||    
T  22627134 agaggcaaagaaacatgcattttc 22627111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 25883591 - 25883702
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    ||||||||||||| ||||||| || | | | ||||| || ||||| || |||||||||||||||||||||||||||| ||||| |||| |||||||  ||    
T  25883591 agatgaagaatgacgattcaaaagacctaaaaagactttgcagagggaggaattatgttcccaagttccaagacatcttacattgaagtaaacacctcaa 25883690  T
Q  111 aaggcgaagaaa 122  Q
    | ||||||||||    
T  25883691 agggcgaagaaa 25883702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 45572644 - 45572727
Alignment:
Q  38 tcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||||| ||||| || || ||||| |||||||||||||||||||||| |||||||||||||| | || ||||||||||||||    
T  45572644 tcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaata-cctaaaaggcgaagaaa 45572727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 45576311 - 45576394
Alignment:
Q  38 tcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||||| ||||| || || ||||| |||||||||||||||||||||| |||||||||||||| | || ||||||||||||||    
T  45576311 tcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaata-cctaaaaggcgaagaaa 45576394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 45579978 - 45580061
Alignment:
Q  38 tcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||||| ||||| || || ||||| |||||||||||||||||||||| |||||||||||||| | || ||||||||||||||    
T  45579978 tcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaata-cctaaaaggcgaagaaa 45580061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 45583645 - 45583728
Alignment:
Q  38 tcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||||| ||||| || || ||||| |||||||||||||||||||||| |||||||||||||| | || ||||||||||||||    
T  45583645 tcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaata-cctaaaaggcgaagaaa 45583728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 45587312 - 45587395
Alignment:
Q  38 tcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||||| ||||| || || ||||| |||||||||||||||||||||| |||||||||||||| | || ||||||||||||||    
T  45587312 tcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaata-cctaaaaggcgaagaaa 45587395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 45590979 - 45591062
Alignment:
Q  38 tcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||||| ||||| || || ||||| |||||||||||||||||||||| |||||||||||||| | || ||||||||||||||    
T  45590979 tcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaata-cctaaaaggcgaagaaa 45591062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 45594646 - 45594729
Alignment:
Q  38 tcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||||| ||||| || || ||||| |||||||||||||||||||||| |||||||||||||| | || ||||||||||||||    
T  45594646 tcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaata-cctaaaaggcgaagaaa 45594729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 45598313 - 45598396
Alignment:
Q  38 tcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||||| ||||| || || ||||| |||||||||||||||||||||| |||||||||||||| | || ||||||||||||||    
T  45598313 tcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaata-cctaaaaggcgaagaaa 45598396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 45601980 - 45602063
Alignment:
Q  38 tcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||||| ||||| || || ||||| |||||||||||||||||||||| |||||||||||||| | || ||||||||||||||    
T  45601980 tcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaata-cctaaaaggcgaagaaa 45602063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 45605647 - 45605730
Alignment:
Q  38 tcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||||| ||||| || || ||||| |||||||||||||||||||||| |||||||||||||| | || ||||||||||||||    
T  45605647 tcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaata-cctaaaaggcgaagaaa 45605730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 45609314 - 45609397
Alignment:
Q  38 tcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||||| ||||| || || ||||| |||||||||||||||||||||| |||||||||||||| | || ||||||||||||||    
T  45609314 tcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaata-cctaaaaggcgaagaaa 45609397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 45612981 - 45613064
Alignment:
Q  38 tcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||||| ||||| || || ||||| |||||||||||||||||||||| |||||||||||||| | || ||||||||||||||    
T  45612981 tcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaata-cctaaaaggcgaagaaa 45613064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 45616648 - 45616731
Alignment:
Q  38 tcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||||| ||||| || || ||||| |||||||||||||||||||||| |||||||||||||| | || ||||||||||||||    
T  45616648 tcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaata-cctaaaaggcgaagaaa 45616731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 19198731 - 19198821
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    |||| |||||||||||||||| | |  |||| ||||||||||| ||||||||||| |||||||||||||||| ||||| || | |||||||    
T  19198731 aagattgaagattcaagaggccttacgagacgttacagagagaggaattatgttctcaagttccaagacatcttacattgatgaaaacacc 19198821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 27419707 - 27419645
Alignment:
Q  77 tccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaacaagcattttctgcacc 139  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| || ||||| |||||    
T  27419707 tccaagacatcttacatagaagcaaacacccaaaaaggcgaagaaacatgcgttttcagcacc 27419645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 32086871 - 32086799
Alignment:
Q  14 tgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacat 86  Q
    |||| |||||||||||||||||| | || |||| ||||| || || |||||||||||||||||||||||||||    
T  32086871 tgaaaaatgaagattcaagaggctttaggagactttacaaagggaggaattatgttcccaagttccaagacat 32086799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 11464565 - 11464639
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagaca 85  Q
    |||||||||||||||||||||||||| ||| ||||| | ||| || || ||||| | ||||||||||||||||||    
T  11464565 agatgaagaatgaagattcaagaggcctcaaaagacttaacaaagggaggaattctattcccaagttccaagaca 11464639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 26651885 - 26651974
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagca 100  Q
    |||| ||||||||| |||| |||||| ||||||||  |||||||| || |||||||||   |||||||||||||||| ||||| ||||||    
T  26651885 agataaagaatgaatattctagaggcctcagaagatgttacagagggaggaattatgtcatcaagttccaagacatcttacatggaagca 26651974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 28930115 - 28930046
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagaca 85  Q
    ||||||||| ||||||||||| ||||||||| ||||||   || ||||| ||||||||||||||||||||    
T  28930115 aagaatgaatattcaagaggcctcagaagactttacagttggaggaattttgttcccaagttccaagaca 28930046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 25938388 - 25938320
Alignment:
Q  19 aatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatc 87  Q
    ||||||||||||| || | ||||||||||||||| || || ||||||||||||||||| | ||||||||    
T  25938388 aatgaagattcaatagacttcagaagacattacaaagggaggaattatgttcccaagtcctaagacatc 25938320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 27871131 - 27871027
Alignment:
Q  22 gaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaa 121  Q
    ||||||||||||||| |  |||||||||| | || || |||||||||| ||||||||||||||| | || || ||| ||||||||| ||||| | ||| |    
T  27871131 gaagattcaagaggccttggaagacattataaagtgaggaattatgtttccaagttccaagacaccttatatcgaaacaaacacccaaaaagacaaagca 27871032  T
Q  122 acaag 126  Q
    |||||    
T  27871031 acaag 27871027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 36191325 - 36191428
Alignment:
Q  19 aatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaa 118  Q
    ||||||||||||| |||| ||| ||||| |||||  | || ||||||||||  |||||||||||| | | ||||| ||||||||||||  ||||||| ||    
T  36191325 aatgaagattcaataggcttcataagactttacaaggggaggaattatgttttcaagttccaagataacttacattgaagcaaacacctaaaaaggcaaa 36191424  T
Q  119 gaaa 122  Q
    ||||    
T  36191425 gaaa 36191428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 32438937 - 32439043
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    ||||||||||||||||||| ||| || |||||||| || || ||||| ||||| ||||| | |||||||| || |   |||||||||||  ||||| |||    
T  32438937 gaatgaagattcaagaggcctcaaaaaacattacaaagggaggaattctgttcacaagtcctaagacatcttatactaaagcaaacaccaaaaaagacga 32439036  T
Q  118 agaaaca 124  Q
    |||||||    
T  32439037 agaaaca 32439043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 29850866 - 29850790
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatc 87  Q
    ||||| |||||||| |||||| ||||||  |||||| ||||| || || ||||| ||||||||||||||||| ||||    
T  29850866 agatgtagaatgaaaattcaaaaggcatgtgaagactttacaaagggaggaattttgttcccaagttccaagtcatc 29850790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 34369167 - 34369063
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    ||||||||||||||||||| ||| |||| |||| | |  || ||||| ||||||||||| | |||||||| ||  | ||||||||||||| ||| | |||    
T  34369167 gaatgaagattcaagaggcctcataagagattaaaaatggaggaattttgttcccaagtccgaagacatcttatgtggaagcaaacacccaaaaggacga 34369068  T
Q  118 agaaa 122  Q
    |||||    
T  34369067 agaaa 34369063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 24346321 - 24346392
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatc 87  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  ||  |||||| ||||||||| ||||||||||    
T  24346321 aagaatgaagactcatgaggcctcagaagacattacaaatggagaaattatattcccaagtcccaagacatc 24346392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 20175659 - 20175545
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||| |||||||| |||||||||||| ||| ||||| ||||| || || |||||  ||||| | || | |||||| | || || ||||||||||||| ||    
T  20175659 agatcaagaatgatgattcaagaggcctcataagactttacatagggacgaattcagttcctaggtcctaagacaacttatatggaagcaaacacccaaa 20175560  T
Q  111 aaggcgaagaaacaa 125  Q
    | | |||||||||||    
T  20175559 aggacgaagaaacaa 20175545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 16157355 - 16157440
Alignment:
Q  42 aagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaacaagc 127  Q
    |||| |||||| || || ||||| ||| ||||||| |||| ||||| | ||| ||||||||| ||| ||||| |||||||||||||    
T  16157355 aagaaattacaaagggaggaattttgtgcccaagtcccaatacatctttcatggaagcaaacgcccaaaaagacgaagaaacaagc 16157440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 18971037 - 18971086
Alignment:
Q  78 ccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaacaagc 127  Q
    |||||||||| || || ||||||||||||| ||||| |||||||||||||    
T  18971037 ccaagacatcttatatggaagcaaacacccaaaaagacgaagaaacaagc 18971086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 24518842 - 24518957
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggc 115  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||| || || ||||||||||||| ||||| |    
T  24518842 aagaatgaagatttaagaggcctcagaagacattacagagagaggaatttagttcccaagttccaagacatcttatatggaagcaaacacccaaaaagac 24518941  T
Q  116 gaagaaacaagcattt 131  Q
    ||| ||||||||||||    
T  24518942 gaaaaaacaagcattt 24518957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 24381576 - 24381697
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||  | ||||| |||||||||||||||||||||| |||||| ||| |||||||| ||    
T  24381576 agatgaagaatgaagattcaagagtcctcagaagacattacaaaggaaggaattttgttcccaagttccaagacatcttacatataagaaaacacccaaa 24381675  T
Q  111 aaggcgaagaaacaagcatttt 132  Q
    ||| | |||||||| |||||||    
T  24381676 aagacaaagaaacatgcatttt 24381697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 24380603 - 24380707
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| ||||||||| | ||| ||  | ||||||||||||||||||| |||||||| ||||||||||||||||||  ||    
T  24380603 agatgaagaatgaagattcaagaggcctcagaagacttcacaaagcaaggaattatgttcccaagttcaaagacatcttacatagaagcaaacacctaaa 24380702  T
Q  111 aaggc 115  Q
    |||||    
T  24380703 aaggc 24380707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 30487693 - 30487580
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| ||| ||||  || ||||| |||||||| | |||||||||||||||||||| || | | |||||||||||| ||    
T  30487693 agatgaagaatgaagattcaagaggcctcaaaagatgttgcagagggatgaattctattcccaagttccaagacatcttatagataagcaaacacccaaa 30487594  T
Q  111 aaggcgaagaaaca 124  Q
    ||||| ||||||||    
T  30487593 aaggcaaagaaaca 30487580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 7984962 - 7984851
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||||||| ||||| |||||  | || |||||||||||| ||||||||||||||| ||||| |||| ||||| |  ||    
T  7984962 agatgaagaatgaagattcaagaggcatcataagactttacaatgggaggaattatgttccaaagttccaagacatcttacattgaagaaaacatctaaa 7984863  T
Q  111 aaggcgaagaaa 122  Q
     |||||||||||    
T  7984862 taggcgaagaaa 7984851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 22501671 - 22501586
Alignment:
Q  21 tgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    |||||||||||||||| |||||||||||||||||| || ||||| |||||||||||||||||| ||| ||||| |||| |||||||    
T  22501671 tgaagattcaagaggcctcagaagacattacagagggaggaattctgttcccaagttccaagatatcttacattgaagaaaacacc 22501586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 5856628 - 5856500
Alignment:
Q  10 gagatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattat-gttcccaagttccaagacatcatacatagaagcaaacacccg 108  Q
    ||||||||||||||||||||||||||| || ||| |  |||||||| || ||||| | |||||||||||||||| |||| |||||| ||||||||||||     
T  5856628 gagatgaagaatgaagattcaagaggcctcggaacatgttacagaggga-gaattcttgttcccaagttccaagtcatcttacataaaagcaaacaccc- 5856531  T
Q  109 aaaaggcgaagaaacaagcattttctgcacc 139  Q
    ||||||||||| |||| || ||||| |||||    
T  5856530 aaaaggcgaagcaacatgcgttttcagcacc 5856500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 14271683 - 14271594
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacac 105  Q
    |||| ||||||||||| |||| ||||||||| ||||| || || ||||||||||| |||||||||||||||| ||||| |||| ||||||    
T  14271683 aagattgaagattcaataggcctcagaagacgttacatagggaggaattatgttctcaagttccaagacatcttacattgaagaaaacac 14271594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 30117908 - 30118017
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| ||| ||||| || || || ||   ||| ||||| |||||||||||||||| ||||| ||||||||||||  ||    
T  30117908 agatgaagaatgaagattcaagaggcctcaaaagactttgcaaagggag--attctgttctcaagttccaagacatcttacattgaagcaaacacctaaa 30118005  T
Q  111 aaggcgaagaaa 122  Q
    ||||| ||||||    
T  30118006 aaggcaaagaaa 30118017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 6886504 - 6886423
Alignment:
Q  23 aagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaaca 104  Q
    |||||||||||||||||| ||||| ||| |||| ||  |||| |||||||||||||||||||||| ||||| |||| |||||    
T  6886504 aagattcaagaggcatcataagacgttatagagggagaaattctgttcccaagttccaagacatcttacattgaagaaaaca 6886423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 24851191 - 24851278
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacac 105  Q
    ||||||||||||||||| | ||||||||||||||| |  ||| |||| |||||||  || |||||||||| ||||| |||||||||||    
T  24851191 gaatgaagattcaagagacctcagaagacattacaaaaggataaattttgttcccgggtcccaagacatcttacatggaagcaaacac 24851278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 25180972 - 25181082
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    ||||||| |||||||||||||||||||||| ||||| |||||   ||| ||||| | |||||||||||||||||||  ||| | |||| |||||||  ||    
T  25180972 agatgaaaaatgaagattcaagaggcatcataagactttacaataagaggaattct-ttcccaagttccaagacattttactttgaagaaaacacctcaa 25181070  T
Q  111 aaggcgaagaaa 122  Q
     |||||||||||    
T  25181071 caggcgaagaaa 25181082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 15058755 - 15058863
Alignment:
Q  13 atgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaa 112  Q
    |||||||||||||||||||||||  ||||||||| ||||| |  ||  |||| |||||||||||||| || |||| || || |||||||||| || ||||    
T  15058755 atgaagaatgaagattcaagaggtctcagaagacgttacaaatggagaaattttgttcccaagttcc-aggcatcttatatggaagcaaacatccaaaaa 15058853  T
Q  113 ggcgaagaaa 122  Q
    | ||||||||    
T  15058854 gacgaagaaa 15058863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 19785030 - 19785143
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| ||| ||||| ||||   | ||  |||| ||||||||| ||||||| ||   ||||||||||||||||||  |     
T  19785030 agatgaagaatgaagattcaagaggcctcataagactttacgacgggagaaattttgttcccaaattccaaggcaatttacatagaagcaaacacctaac 19785129  T
Q  111 aaggcgaagaaaca 124  Q
    |||| |||||||||    
T  19785130 aaggggaagaaaca 19785143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 14076964 - 14076876
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaaca 104  Q
    ||||||||||||||||||||| | |||| | |||||| || || |||||  ||| |||| |||||||||||| || |||||||||||||    
T  14076964 aagaatgaagattcaagaggccttagaaaatattacaaagggaggaatttcgttaccaaattccaagacatcttatatagaagcaaaca 14076876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 18007382 - 18007314
Alignment:
Q  19 aatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatc 87  Q
    |||||||||||||||||| || |||||| |||||||| ||| ||||||||||||| || |||| |||||    
T  18007382 aatgaagattcaagaggcctctgaagactttacagagggataaattatgttcccaggtcccaaaacatc 18007314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 15176687 - 15176750
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttcc 79  Q
    ||||||||||||||||||||| |||| |||| ||||| || || ||||| ||||||||||||||    
T  15176687 aagaatgaagattcaagaggcctcaggagactttacatagggaggaattctgttcccaagttcc 15176750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 34499136 - 34499062
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagaca 85  Q
    |||| ||||||| | ||||||||||| |||| | ||||||||||| || |||||||||||||| || ||||||||    
T  34499136 agatcaagaatggaaattcaagaggcctcaggaaacattacagagggaggaattatgttcccatgtcccaagaca 34499062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 2638564 - 2638471
Alignment:
Q  13 atgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    ||||||| |||||||||||||||| ||| ||||  ||||| |  ||| |||| ||||| |||||||||| ||||| ||||| |||| |||||||    
T  2638564 atgaagagtgaagattcaagaggcctcaaaagaatttacaaatggataaattctgttctcaagttccaatacatcttacattgaagaaaacacc 2638471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 24091131 - 24091191
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacaga-gagatgaattatgttcccaagt 76  Q
    ||||||||||||||||||||| ||||||||| ||||| | | ||||||||||||||||||||    
T  24091131 aagaatgaagattcaagaggcctcagaagac-ttacaaatgggatgaattatgttcccaagt 24091191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 24905831 - 24905790
Alignment:
Q  82 gacatcatacatagaagcaaacacccgaaaaggcgaagaaac 123  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  24905831 gacatcttacatagaagcaaacacccgaaaaggtgaagaaac 24905790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 23868085 - 23868155
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacag-agagatgaattatgttcccaagttccaagaca 85  Q
    ||||||||||||||||||||  |||| |||| |||||| || || |||||||||||| ||||||| |||||    
T  23868085 aagaatgaagattcaagagggctcaggagactttacagtagggaggaattatgttccaaagttccgagaca 23868155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 37527274 - 37527348
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagaca 85  Q
    |||||||||||||||||||||||||| | ||||||| ||||  |  || ||||| |||||||||  |||||||||    
T  37527274 agatgaagaatgaagattcaagaggcctaagaagactttactcatggaggaattttgttcccaatgtccaagaca 37527348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 1e-30; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 16669971 - 16670083
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    ||||||||||| ||||||||| |||| ||||||||| ||||| || || ||||| ||||||||||||||| |||||| ||||||||||||||||||||||    
T  16669971 agatgaagaattaagattcaaaaggcctcagaagacgttacaaagggaggaattttgttcccaagttccatgacatcttacatagaagcaaacacccgaa 16670070  T
Q  111 aaggcgaagaaac 123  Q
    || ||||||||||    
T  16670071 aaagcgaagaaac 16670083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 23083548 - 23083435
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| || |||||| |||||||| |   |||| |||| ||||||||||||||||| |||||| || |||||| || ||    
T  23083548 agatgaagaatgaagattcaagaggcctcggaagacgttacagagggtgaaattttgtttccaagttccaagacatcttacataaaaacaaacatccaaa 23083449  T
Q  111 aaggcgaagaaaca 124  Q
    ||||| ||||||||    
T  23083448 aaggcaaagaaaca 23083435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 25024953 - 25024833
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| ||| ||||| ||||| || || ||| |||||||| ||||||||||||| | || ||||||||||||| || ||    
T  25024953 agatgaagaatgaagattcaagaggcctcaaaagactttacaaagggaagaaatatgttccgaagttccaagacaacttatatagaagcaaaca-cctaa 25024855  T
Q  111 aaggcgaagaaacaagcatttt 132  Q
    ||| |||||||| | |||||||    
T  25024854 aagacgaagaaatatgcatttt 25024833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 26114451 - 26114526
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacat 86  Q
    |||||||||||||||||||||||||| ||| ||||| ||||| |  |||||||| |||||||||||||||||||||    
T  26114451 agatgaagaatgaagattcaagaggcctcaaaagactttacaaatggatgaattttgttcccaagttccaagacat 26114526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 1832303 - 1832399
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacaccc 107  Q
    |||| ||||| ||| ||||||||||| ||||||||||||||||||| || ||||||| ||||| ||  ||||||||| || || |||||||||||||    
T  1832303 agatcaagaaagaatattcaagaggcctcagaagacattacagagacataaattatgatcccaggtcacaagacatcttatatggaagcaaacaccc 1832399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 10236436 - 10236325
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    ||||||| ||||||||||||||| || ||||||| | ||||| ||  | ||||| ||||| |||||||||||||||| ||||| |||| |||||||  ||    
T  10236436 agatgaataatgaagattcaagatgcctcagaagtctttacaaaggaaggaattttgttctcaagttccaagacatcttacattgaagaaaacacctcaa 10236337  T
Q  111 aaggcgaagaaa 122  Q
    ||||| ||||||    
T  10236336 aaggcaaagaaa 10236325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 19094093 - 19093998
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    |||||||||||||||||||||||||| ||| ||||| |||||||| || ||||| | ||  ||||||||||||||||  |||| |||| |||||||    
T  19094093 agatgaagaatgaagattcaagaggcctcataagactttacagagggaggaattttattaacaagttccaagacatctcacattgaagaaaacacc 19093998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 18447689 - 18447803
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||| ||||| ||||||||||||||| | |||| ||||||||||| ||  ||||||||||| | || |||||||||| || || ||||| ||||||| |     
T  18447689 agatcaagaaggaagattcaagaggccttagaaaacattacagagggagaaattatgttcctaggtcccaagacatcttatatggaagctaacacccaac 18447788  T
Q  111 aaggcgaagaaacaa 125  Q
    ||| |||||||||||    
T  18447789 aagacgaagaaacaa 18447803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 9849957 - 9850070
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaa-gttccaagacatcatacatagaagcaaacacccga 109  Q
    |||| ||||||||| ||||||||||  ||||||||| ||||| || || ||||| ||||||||| ||||||||||| | ||||||||| ||||||||  |    
T  9849957 agataaagaatgaaaattcaagaggtctcagaagactttacaaagggaggaattctgttcccaaagttccaagacaacttacatagaaacaaacacctaa 9850056  T
Q  110 aaaggcgaagaaac 123  Q
    |||| | |||||||    
T  9850057 aaagacaaagaaac 9850070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 17277693 - 17277617
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatc 87  Q
    |||| ||||||||||| ||||||||| ||| ||||| ||||| || || ||||| ||||||||||||||||||||||    
T  17277693 agataaagaatgaagactcaagaggcctcataagactttacaaagggaggaattttgttcccaagttccaagacatc 17277617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 19547308 - 19547408
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    ||||||||||||||||||| || |||||||||||| || ||  |||||||||| |||||| ||||||||| ||  | |||||||||| || ||||| |||    
T  19547308 gaatgaagattcaagaggcgtcggaagacattacaaagggagaaattatgttctcaagtttcaagacatcttatgtggaagcaaacatccaaaaagacga 19547407  T
Q  118 a 118  Q
    |    
T  19547408 a 19547408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 8968327 - 8968390
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttcc 79  Q
    ||||||||||||||||||| | ||||||||| |||||| | || ||||||||||||||||||||    
T  8968327 aagaatgaagattcaagagacctcagaagactttacagtgggaggaattatgttcccaagttcc 8968390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 12836307 - 12836370
Alignment:
Q  61 aattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaaca 124  Q
    |||| |||||||||||||| ||||||| || |||||||||||||||| ||||| ||||||||||    
T  12836307 aattttgttcccaagttcctagacatcttatatagaagcaaacacccaaaaagacgaagaaaca 12836370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 23975697 - 23975604
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaaca 104  Q
    |||| |||| ||| |||||||||||| ||| |||| ||||||||||||  ||||||||||||| || ||| |||||| || || ||||||||||    
T  23975697 agatcaagagtgacgattcaagaggcctcataagatattacagagagagaaattatgttcccaggtcccatgacatcttatatggaagcaaaca 23975604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 8140304 - 8140205
Alignment:
Q  22 gaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaa 121  Q
    ||||||||||| ||| ||| |||||||||||||| || || || |||||||| || |||||||||  || || |||||||||| || |||||| ||||||    
T  8140304 gaagattcaaggggcctcataagacattacagagggaggacttctgttcccaggtcccaagacatgttatatggaagcaaacatccaaaaaggtgaagaa 8140205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 17711147 - 17711084
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttcc 79  Q
    |||||||||||||||||||||  ||  |||||||||| || || ||||||||||||||||||||    
T  17711147 aagaatgaagattcaagaggccccatgagacattacatagggaggaattatgttcccaagttcc 17711084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 20828392 - 20828483
Alignment:
Q  15 gaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    ||||| |||||||||||||||| ||| || |  |||||||| || || || |||||||||||||||| ||||| ||||| |||| |||||||    
T  20828392 gaagattgaagattcaagaggcctcataatatgttacagagggaggagttctgttcccaagttccaaaacatcttacattgaagaaaacacc 20828483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 22345915 - 22345852
Alignment:
Q  20 atgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaaga 83  Q
    ||||||||||||||||| ||| ||||||||||| || || ||||| |||||||| |||||||||    
T  22345915 atgaagattcaagaggcctcataagacattacaaagggaggaattttgttcccatgttccaaga 22345852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 5685485 - 5685391
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacac 105  Q
    |||||||||| ||||||||||||| | ||||||||| |||||||| ||  |||| | ||| ||||||| || ||||| ||||| |||| ||||||    
T  5685485 agatgaagaaagaagattcaagagacctcagaagactttacagagggagtaatttttttctcaagttctaatacatcttacattgaagaaaacac 5685391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 9053853 - 9053757
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacaccc 107  Q
    |||| |||||||| |||||||||||| | ||||||  ||||||||  |  |||||||| |||| ||  ||||||||| || ||||||||||||||||    
T  9053853 agatcaagaatgatgattcaagaggccttagaagatgttacagaggaagaaattatgtccccaggtctcaagacatcttatatagaagcaaacaccc 9053757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 9263568 - 9263664
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacaccc 107  Q
    |||| ||||||||||||||||||| ||||| ||||| |||||||| ||  ||||||||||  | ||  ||| ||||| || || |||||||||||||    
T  9263568 agatcaagaatgaagattcaagagtcatcataagactttacagagggagaaattatgttcttaggtcacaatacatcttatatggaagcaaacaccc 9263664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 11782318 - 11782258
Alignment:
Q  19 aatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttcc 79  Q
    |||||||||||||||||| |||| |||| ||||||   || ||||||||||||||||||||    
T  11782318 aatgaagattcaagaggcctcaggagactttacagctggaggaattatgttcccaagttcc 11782258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 15047620 - 15047524
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacaccc 107  Q
    |||| ||||||||||||||||||||| ||  ||||| ||||  || ||  | ||| |||||||||| |||||||||| || || |||||||||||||    
T  15047620 agatcaagaatgaagattcaagaggcctcgaaagactttaccaagggagaagttacgttcccaagtcccaagacatcttatatggaagcaaacaccc 15047524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 15106804 - 15106900
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacaccc 107  Q
    |||| ||||||||||||||||||||| ||  ||||| ||||  || ||  | ||| |||||||||| |||||||||| || || |||||||||||||    
T  15106804 agatcaagaatgaagattcaagaggcctcgaaagactttaccaagggagaagttacgttcccaagtcccaagacatcttatatggaagcaaacaccc 15106900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 19927075 - 19927135
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcc 71  Q
    |||||||||||||||||| ||||||| ||||||||  ||||| || || ||||||||||||    
T  19927075 agatgaagaatgaagatttaagaggcctcagaagattttacaaagggaggaattatgttcc 19927135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 5691602 - 5691507
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    ||||||||||||||||||  | |||| ||| ||||| |||||||| |   |||| |||||| ||||||||| ||||| ||||| |||| |||||||    
T  5691602 agatgaagaatgaagatttgataggcctcaaaagactttacagagggggaaattttgttccaaagttccaatacatcttacattgaagaaaacacc 5691507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 19562302 - 19562397
Alignment:
Q  27 ttcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||| || | ||||||| ||||||||  |  |||||||||||||||||||||||||||  | || || | |||||||  ||||||||||||||    
T  19562302 ttcaagaagccttagaagactttacagaggcaataattatgttcccaagttccaagacatctgatatggatgaaaacacctcaaaaggcgaagaaa 19562397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 17661789 - 17661677
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    |||||| |||||||||||| ||| ||||||||||   | || ||||| | || ||||||| ||||||||| || |  |||| |||||||| ||||| |||    
T  17661789 gaatgacgattcaagaggcctcataagacattactaggggaggaattctttttccaagttacaagacatcctataaggaaggaaacaccc-aaaagacga 17661691  T
Q  118 agaaacaagcattt 131  Q
    |||||||| |||||    
T  17661690 agaaacaaacattt 17661677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 6e-30; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 15171013 - 15171124
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| ||||||||| ||||| || || ||||| |||||| ||||||||||||||| |||||||| |||||||||  ||    
T  15171013 agatgaagaatgaagattcaagaggcctcagaagactttacaaagggaggaattttgttcctaagttccaagacatcttacatagaggcaaacacctaaa 15171112  T
Q  111 aaggcgaagaaa 122  Q
    ||||||||||||    
T  15171113 aaggcgaagaaa 15171124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 5485472 - 5485288
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||| ||  ||  ||| ||||| |||||||| || ||||| | |||||||||||||||||||| ||||| ||||||||||||| ||    
T  5485472 agatgaagaatgaagatttaaatggtctcaaaagacgttacagagggaagaattttattcccaagttccaagacatcttacatggaagcaaacaccc-aa 5485374  T
Q  111 aaggcgaagaaacaagcattttctgcaccaaacacactcacaagtgcccaagcgcatagagttggatgccaggggcccatgaattt 196  Q
    ||| |||||||||| |||||||  |||||  ||||||||||| | ||||| ||||| ||| | ||  |||||| ||||||||||||    
T  5485373 aagacgaagaaacatgcatttttagcaccggacacactcacatgcgcccaggcgcacagaatggggcgccaggcgcccatgaattt 5485288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 21233950 - 21233829
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||  | | ||||| ||||| || || || ||||||||| ||||||||||||||| | ||||||||||||||||  |     
T  21233950 agatgaagaatgaagattcaagaggtcttaaaagactttacaaagcgaggagttatgttcctaagttccaagacatcttgcatagaagcaaacaccttag 21233851  T
Q  111 aaggcgaagaaacaagcatttt 132  Q
    ||||||||||||||||||||||    
T  21233850 aaggcgaagaaacaagcatttt 21233829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 9767631 - 9767520
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||||||||||||| |||||| | || |||||||||||| ||||||||||||||| ||||  |||  |||||||  ||    
T  9767631 agatgaagaatgaagattcaagaggcatcagaagactttacagggggaggaattatgttcctaagttccaagacatcttacaatgaacaaaacacctaaa 9767532  T
Q  111 aaggcgaagaaa 122  Q
    |||| |||||||    
T  9767531 aaggtgaagaaa 9767520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 1589084 - 1588989
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    ||||||||||||||||||||| | || ||||||||| |||||||  || |||||||||||||||||||||||||||| ||||| |||| |||||||    
T  1589084 agatgaagaatgaagattcaacatgcctcagaagactttacagaaggaggaattatgttcccaagttccaagacatcttacattgaagaaaacacc 1588989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 6039547 - 6039690
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||| ||||||||||||||||||||| ||| || || |||||||| || ||| ||||||||| ||||| |||||||| ||||| ||| ||||||||  ||    
T  6039547 agataaagaatgaagattcaagaggcctcataataccttacagagggacgaactatgttcccgagttctaagacatcttacattgaaacaaacaccttaa 6039646  T
Q  111 aaggcgaagaaacaagcattttctgcaccaaacacactcacaag 154  Q
     ||| ||||||||| |||||||| |||||  || ||||||||||    
T  6039647 caggtgaagaaacatgcattttcagcaccggacgcactcacaag 6039690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 15611288 - 15611401
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    ||||||| |||| || |||||||||| | | ||||| |||||||| ||  |||||||||||||| |||||||||||| || |||||||||||||||| ||    
T  15611288 agatgaataatgtaggttcaagaggcctaaaaagacgttacagagggagaaattatgttcccaaattccaagacatcttatatagaagcaaacacccaaa 15611387  T
Q  111 aaggcgaagaaaca 124  Q
    |||| |||||||||    
T  15611388 aaggtgaagaaaca 15611401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 9501859 - 9501764
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    |||| ||||||||||||||||||||| ||| || |  |||||||| || |||||||||| |||||| |||||||||| ||||||||||||||||||    
T  9501859 agataaagaatgaagattcaagaggcctcaaaatatgttacagagggaggaattatgtttccaagtgccaagacatcttacatagaagcaaacacc 9501764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 3736185 - 3736090
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    |||||||||||||||||||||||||| |||| ||||  ||||||| || ||||| ||||| ||| |||||||||||| ||||| |||| |||||||    
T  3736185 agatgaagaatgaagattcaagaggcctcaggagactatacagagggaggaattctgttctcaatttccaagacatcttacattgaagaaaacacc 3736090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 3189588 - 3189682
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacac 105  Q
    ||||||||| ||||   ||||||||  | ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| |||| ||||||    
T  3189588 agatgaagagtgaaaggtcaagaggtcttagaagactttacagagggatgaattatgttcccaagttccaagacatcttacattgaagaaaacac 3189682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 20175934 - 20175828
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    ||||||||||||||||||| || ||||||| |||| || || |||||||||||||||||| ||||||||  ||||| ||| ||||||||  |||||  ||    
T  20175934 gaatgaagattcaagaggcctcggaagacaatacaaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatga 20175835  T
Q  118 agaaaca 124  Q
    |||||||    
T  20175834 agaaaca 20175828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 144823 - 144702
Alignment:
Q  11 agatgaagaatgaagattcaagagg-catcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccga 109  Q
    |||||||||| |||||||||||| | | || |||||| || || |  || ||||||||||||||||||||||||||   |||||||||||||| |||  |    
T  144823 agatgaagaaagaagattcaagaagacctcggaagacttttcaaatggaggaattatgttcccaagttccaagacaatttacatagaagcaaatacctaa 144724  T
Q  110 aaaggcgaagaaacaagcattt 131  Q
    |||||| |||||||||||||||    
T  144723 aaaggcaaagaaacaagcattt 144702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 10418403 - 10418292
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    ||||||||| | |||||||||||| | ||||||||| ||||| |  ||  ||||||||||||||||||||||||||| ||||  |||||||||||   ||    
T  10418403 agatgaagattcaagattcaagagacctcagaagactttacaaaaggagaaattatgttcccaagttccaagacatcttacactgaagcaaacacttaaa 10418304  T
Q  111 aaggcgaagaaa 122  Q
    ||| ||||||||    
T  10418303 aagacgaagaaa 10418292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 21428641 - 21428562
Alignment:
Q  13 atgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcataca 92  Q
    |||||||||||||||||||||||| ||| ||||| |||||||  || ||||| | |||||||||||||||||||| ||||    
T  21428641 atgaagaatgaagattcaagaggcctcaaaagactttacagatggaggaattctattcccaagttccaagacatcttaca 21428562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 7399181 - 7399072
Alignment:
Q  15 gaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaagg 114  Q
    ||||||| |||||||||||||| |  |||||| ||||  || || ||||| |||||||| ||||||||| | | |||||||||||| | ||| |||||||    
T  7399181 gaagaataaagattcaagaggcctatgaagactttacgaagggaggaattgtgttcccatgttccaagaaaacttacatagaagcagataccggaaaagg 7399082  T
Q  115 cgaagaaaca 124  Q
    ||||||||||    
T  7399081 cgaagaaaca 7399072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 5221218 - 5221330
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    ||||| |||||||||||||||||    ||| ||||| ||||| |  || ||||| ||||||||||||||| | ||   ||||||||||||||||||||||    
T  5221218 agatgtagaatgaagattcaagaaaattcataagacgttacaaatggaggaattctgttcccaagttccaggtcactttacatagaagcaaacacccgaa 5221317  T
Q  111 aaggcgaagaaac 123  Q
    ||||| |||||||    
T  5221318 aaggcaaagaaac 5221330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 8317330 - 8317402
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaaga 83  Q
    |||||||||||||| ||||||||||| ||| ||||| ||| |||| ||| |||| ||||||||||||||||||    
T  8317330 agatgaagaatgaaaattcaagaggcctcaaaagactttatagagggataaattttgttcccaagttccaaga 8317402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 8309987 - 8310062
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacat 86  Q
    |||||||||||||||||||||||||| ||| ||||| ||| ||||  | ||||| |||||||| ||||||||||||    
T  8309987 agatgaagaatgaagattcaagaggcctcataagactttagagaggaaggaattctgttcccatgttccaagacat 8310062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 19154671 - 19154588
Alignment:
Q  23 aagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    ||||||||| |||| |||||||||||||||||  ||  |||| ||||||||||||| |||||||| ||||| |||| |||||||    
T  19154671 aagattcaaaaggcctcagaagacattacagaaggagaaattctgttcccaagttctaagacatcttacattgaagaaaacacc 19154588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 20754070 - 20753987
Alignment:
Q  23 aagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    ||||||||| |||| |||||||||||||||||  ||  |||| ||||||||||||| |||||||| ||||| |||| |||||||    
T  20754070 aagattcaaaaggcctcagaagacattacagaaggagaaattctgttcccaagttctaagacatcttacattgaagaaaacacc 20753987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 4900580 - 4900690
Alignment:
Q  21 tgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaaga 120  Q
    ||||||||||||| || |||||||||| |||| |  ||  ||||  |||||||||| |||| ||||| || |  ||||||||||||| ||||| ||||||    
T  4900580 tgaagattcaagaagcctcagaagacaatacaaaaggaaaaatttggttcccaagtcccaatacatcgtatacggaagcaaacacccaaaaagacgaaga 4900679  T
Q  121 aacaagcattt 131  Q
    |||||||||||    
T  4900680 aacaagcattt 4900690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 13281985 - 13282090
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    ||||||||||||||||||| ||| |||| |||||| || || ||||| ||||||||||| |||||||||| ||  | |||| |||||||| | ||| |||    
T  13281985 gaatgaagattcaagaggcctcaaaagatattacaaagggaggaattttgttcccaagtcccaagacatcttatctggaaggaaacaccc-ataagacga 13282083  T
Q  118 agaaaca 124  Q
    |||||||    
T  13282084 agaaaca 13282090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 24751454 - 24751523
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatc 87  Q
    ||||||||||||||||||| ||||||||||||||| || ||  |||| ||||||||| |||||| |||||    
T  24751454 gaatgaagattcaagaggcctcagaagacattacaaagggagaaattttgttcccaatttccaaaacatc 24751523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 2455182 - 2455070
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    |||||||||||||||| || ||  |||| |||||  ||| ||||||||||||| ||||| |||||||| | || ||  ||| |||||||| ||||| |||    
T  2455182 gaatgaagattcaagatgcctcgaaagatattaccaagaaatgaattatgttctcaagtcccaagacaacttatatgaaagtaaacacccaaaaagacga 2455083  T
Q  118 agaaacaagcatt 130  Q
    ||||||| |||||    
T  2455082 agaaacatgcatt 2455070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 9288756 - 9288661
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacaccc 107  Q
    |||| |||||||||| |||||||||| ||| ||||| |||||||| ||| | || |||||||| || |||||||||| || || |||||||||||||    
T  9288756 agatcaagaatgaaggttcaagaggcctcataagactttacagagggataagttttgttcccaggt-ccaagacatcttatatggaagcaaacaccc 9288661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 10991227 - 10991291
Alignment:
Q  23 aagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatc 87  Q
    |||||||||||| | ||| ||||||||||| |  ||||||||||||||||||||||||| |||||    
T  10991227 aagattcaagagacctcaaaagacattacaaaaggatgaattatgttcccaagttccaaaacatc 10991291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 17831089 - 17831029
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcc 71  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||| || ||||| ||||||    
T  17831089 agatcaagaatgaagattcaagaggcttcagaagactttacagagggaggaattctgttcc 17831029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 25692627 - 25692567
Alignment:
Q  19 aatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttcc 79  Q
    |||||||||||||||||| ||||||||| |||||  | || ||||||||||||||||||||    
T  25692627 aatgaagattcaagaggcctcagaagactttacaatgggaggaattatgttcccaagttcc 25692567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 1810746 - 1810640
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggc 115  Q
    |||||||| ||||||||| || ||| || |  ||||| |||||  ||||||||||||||||||||||||||| ||  | |||| |||||||| ||||| |    
T  1810746 aagaatgaggattcaagaagcctcataataatttacaaagagagaaattatgttcccaagttccaagacatcttatgtggaagaaaacacccaaaaagac 1810647  T
Q  116 gaagaaa 122  Q
     ||||||    
T  1810646 aaagaaa 1810640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 5471987 - 5472057
Alignment:
Q  17 agaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatc 87  Q
    ||||||||||||||||| ||  || ||||||||||| || || |||||||||||| ||||||||| |||||    
T  5471987 agaatgaagattcaagatgctccataagacattacaaagggaggaattatgttccaaagttccaaaacatc 5472057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 10585436 - 10585510
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagaca 85  Q
    ||||||||||||||||||||| |||  ||||||||| ||||| || || ||||| |||||| ||||| |||||||    
T  10585436 agatgaagaatgaagattcaaaaggtctcagaagactttacaaagggaggaattttgttcctaagtttcaagaca 10585510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 1586028 - 1585953
Alignment:
Q  23 aagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaag 98  Q
    ||||| ||||| || |||||||   |||||||| || |||||||||||||||||| ||||||||| ||||| ||||    
T  1586028 aagatccaagatgcctcagaagttgttacagagggaggaattatgttcccaagtttcaagacatcttacattgaag 1585953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 3585779 - 3585842
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttcc 79  Q
    ||||||||||||||||||||  ||||||||| |||||  | || |||||||||||||| |||||    
T  3585779 aagaatgaagattcaagaggtctcagaagactttacaatgggaggaattatgttcccatgttcc 3585842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 9918008 - 9917937
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatc 87  Q
    ||||||||||||||||||||| ||| ||||||||||| || ||  |||| |||||| | |||| ||||||||    
T  9918008 aagaatgaagattcaagaggcctcaaaagacattacatagggagaaattttgttcctaggttcaaagacatc 9917937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 9925920 - 9925849
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatc 87  Q
    ||||||||||||||||||||| ||| ||||||||||| || ||  |||| |||||| | |||| ||||||||    
T  9925920 aagaatgaagattcaagaggcctcaaaagacattacatagggagaaattttgttcctaggttcaaagacatc 9925849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 6018202 - 6018132
Alignment:
Q  13 atgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaaga 83  Q
    |||||||||||||| ||||||||| ||| |||||  || |||| || |||||  |||||||||||||||||    
T  6018202 atgaagaatgaagagtcaagaggcctcaaaagactatatagagggaagaattcagttcccaagttccaaga 6018132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 18201787 - 18201833
Alignment:
Q  60 gaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    ||||| |||||||||||||||||||||| ||||| |||| |||||||    
T  18201787 gaattctgttcccaagttccaagacatcttacattgaagaaaacacc 18201833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 11781650 - 11781601
Alignment:
Q  73 aagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||||||||||| || |||||| ||||||||| ||||| ||||||||    
T  11781650 aagttccaagacatcttatatagaaacaaacacccaaaaagacgaagaaa 11781601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 5e-27; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 820095 - 820217
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    ||||||||||| |||||||||||||| ||| ||||| |||||||| || ||||| |||||| |||||||| |||||| |||| |||||||||||||||||    
T  820095 agatgaagaattaagattcaagaggcctcaaaagacgttacagagggaggaattttgttccaaagttccatgacatcttacagagaagcaaacacccgaa 820194  T
Q  111 aaggcgaagaaacaagcattttc 133  Q
    ||  |||||||||| | ||||||    
T  820195 aacacgaagaaacaggtattttc 820217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 22470655 - 22470766
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    ||||||||||||||||||||| |||| ||||||||| | ||| || || ||||| ||||||||||||| |||||||| |||| |||||||||||||  ||    
T  22470655 agatgaagaatgaagattcaataggcctcagaagacttcacaaagggaggaattttgttcccaagttcgaagacatcttacaaagaagcaaacacctaaa 22470754  T
Q  111 aaggcgaagaaa 122  Q
    ||||||||||||    
T  22470755 aaggcgaagaaa 22470766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 18735524 - 18735612
Alignment:
Q  15 gaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaac 103  Q
    |||||||||||||||||||| | ||||||||| |||||||| || ||||| |||||||||||||||||||||| ||||| |||||||||    
T  18735524 gaagaatgaagattcaagagccctcagaagactttacagagggaggaattctgttcccaagttccaagacatcttacattgaagcaaac 18735612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 28326383 - 28326494
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||| |||||||| || ||| ||| | ||||||||||| ||||| | |||||||||||||||||||| || || ||||||||||||| ||    
T  28326383 agatgaagaatgaatattcaagatgcctcataaggctttacagagagaggaattttattcccaagttccaagacatcttatatggaagcaaacacccaaa 28326482  T
Q  111 aaggcgaagaaa 122  Q
    ||| ||||||||    
T  28326483 aagacgaagaaa 28326494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 27853170 - 27853276
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggc 115  Q
    ||||||||||||||||||||| |||||| || ||||||||  | ||| ||||||| |||||||||||||||| || || ||||||||||||| ||||| |    
T  27853170 aagaatgaagattcaagaggcctcagaatacgttacagaggtaggaaatatgttctcaagttccaagacatcttatatggaagcaaacacccaaaaagac 27853269  T
Q  116 gaagaaa 122  Q
    |||||||    
T  27853270 gaagaaa 27853276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 20886716 - 20886621
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    ||||||||||||||||| |||||||| ||| ||||||||||| || ||| |||| | |||||||||||||||||||| || || ||||||||||||    
T  20886716 agatgaagaatgaagatccaagaggcctcataagacattacaaagggattaattttattcccaagttccaagacatcttatatggaagcaaacacc 20886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 3114971 - 3115081
Alignment:
Q  23 aagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaa- 121  Q
    |||||||||||||| ||||||||| |||||||| || |||||||||||||||||||||||||||  ||||| |||| || ||||  || | ||||||||     
T  3114971 aagattcaagaggcctcagaagacgttacagagggaggaattatgttcccaagttccaagacattttacattgaagaaagcaccaaaacaagcgaagaag 3115070  T
Q  122 acaagcatttt 132  Q
    |||||||||||    
T  3115071 acaagcatttt 3115081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 20891893 - 20892014
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||  |  |||| |||||||||||| ||||||||| ||| |  ||| ||||| || ||    
T  20891893 agatgaagaatgaagattcaagaggcctcagaagactttacagaggaagaaattttgttcccaagtttcaagacatcttactttaaagaaaaca-cctaa 20891991  T
Q  111 aaggcgaaga-aacaagcatttt 132  Q
    |||||||||| ||||||||||||    
T  20891992 aaggcgaagataacaagcatttt 20892014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 6075818 - 6075705
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| |||| || ||||| | || || ||||| | ||| | ||||||| |||||| |||||||||||||||| |||||    
T  6075818 agatgaagaatgaagattcaagaggcctcaggaggcattataaagggaggaattctattctcgagttccaggacatcttacatagaagcaaacatccgaa 6075719  T
Q  111 aaggcgaagaaaca 124  Q
    ||||  ||||||||    
T  6075718 aaggaaaagaaaca 6075705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 19388100 - 19388228
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||| |||||||||| ||||| |||| ||||||||| |||||||  ||  ||||||||||||| |||||||||||||  |||| |||||||||||| |||    
T  19388100 agattaagaatgaagcttcaataggcctcagaagactttacagaaggagaaattatgttcccatgttccaagacatctaacattgaagcaaacacctgaa 19388199  T
Q  111 aaggcgaaga-aacaagcattttctgcac 138  Q
     ||| ||||| ||||| ||||||| ||||    
T  19388200 caggtgaagacaacaaacattttcagcac 19388228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 23054826 - 23054921
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    |||| ||||||||||||||||||||| ||| |||| |||||| || || |||||||||||| |||| |||||||||| || || ||||||||||||    
T  23054826 agatcaagaatgaagattcaagaggcctcaaaagaaattacaaagggaggaattatgttcctaagtcccaagacatcttatatggaagcaaacacc 23054921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 13906833 - 13906929
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacaccc 107  Q
    |||| ||||||| ||||||||||||| ||| ||||| ||||  || || ||||||||||||||||||| | | |||||| |||||||||||||||||    
T  13906833 agataaagaatggagattcaagaggcctcataagactttactaagggaggaattatgttcccaagttcaagggcatcatgcatagaagcaaacaccc 13906929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 17134938 - 17134845
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacac 105  Q
    |||||||||||||||||||||||||| ||| ||||| ||| |||  || ||||| |||||||||| ||||||||||| ||||| |||| ||||||    
T  17134938 agatgaagaatgaagattcaagaggcctcataagactttagagatggaggaattctgttcccaag-tccaagacatcttacattgaagaaaacac 17134845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 22246844 - 22246750
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacac 105  Q
    |||||||||||||||||| ||||| | ||| ||||| ||||| |  || ||||| || |||||| |||||||||||| |||||||||||||||||    
T  22246844 agatgaagaatgaagatttaagagacctcaaaagactttacaaaaggaggaattctgctcccaaattccaagacatcttacatagaagcaaacac 22246750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 6292205 - 6292092
Alignment:
Q  12 gatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaa 111  Q
    ||||||||||||||||||||||||| ||| || || ||| |||| || ||||||||||||        |||||||| ||||||||||||||||| |  ||    
T  6292205 gatgaagaatgaagattcaagaggcctcaaaatacgttatagagggaggaattatgttcc--------aagacatcttacatagaagcaaacacacagaa 6292114  T
Q  112 aggcgaagaaacaagcattttc 133  Q
    |||| ||||||||| |||||||    
T  6292113 aggcaaagaaacaaacattttc 6292092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 8448640 - 8448528
Alignment:
Q  19 aatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaa 118  Q
    |||||||||| ||||||| ||| ||||| ||||| |   | ||||| | |||||||||||||||||| |||||  | |||||||||||  ||||||| ||    
T  8448640 aatgaagatttaagaggcctcaaaagactttacaaacgaaggaattcttttcccaagttccaagacaacatacgcaaaagcaaacacctaaaaaggcaaa 8448541  T
Q  119 gaaacaagcattt 131  Q
    |||||||||||||    
T  8448540 gaaacaagcattt 8448528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 25530985 - 25531091
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    ||||||||||||||||||| |   ||||||||||| ||||| |||||||||||| |||| |||||| ||| || || |||  |||||||  ||||| |||    
T  25530985 gaatgaagattcaagaggccttgtaagacattacaaagagaggaattatgttcctaagtcccaagatatcttatatggaaagaaacaccaaaaaagacga 25531084  T
Q  118 agaaaca 124  Q
    || ||||    
T  25531085 agtaaca 25531091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 5271063 - 5271152
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacaccc 107  Q
    ||||||||||||||||| ||||| |||| |||||| || || ||||||||||| |||||   |||||||| || || |||| ||||||||    
T  5271063 gaatgaagattcaagagacatcataagaaattacaaagggaggaattatgttctcaagtcttaagacatcttatatggaaggaaacaccc 5271152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 5509911 - 5509822
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacac 105  Q
    |||| ||| |||||||||||| ||| ||||| |||||||| || ||||| ||||| |||||| ||||| ||| ||||| |||| ||||||    
T  5509911 aagattgacgattcaagaggcctcataagacgttacagagggaggaattttgttctcaagtttcaagatatcttacattgaagaaaacac 5509822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 34276695 - 34276764
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagaca 85  Q
    ||||||||||| ||||||||| |||| |||| |||||| | || ||||| |||||||||||||| |||||    
T  34276695 aagaatgaagagtcaagaggcctcaggagactttacagtgggaggaattctgttcccaagttccgagaca 34276764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 16223326 - 16223251
Alignment:
Q  23 aagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaag 98  Q
    |||||| ||||||| | ||||| | ||| |||||||  |||| |||||||||||||||||||||| ||||| ||||    
T  16223326 aagattaaagaggccttagaaggcgttatagagagagaaattttgttcccaagttccaagacatcttacattgaag 16223251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 19912420 - 19912355
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaa 81  Q
    ||||| ||||||||||||||| || |||||| ||||| || || ||||| ||||||||| ||||||    
T  19912420 aagaacgaagattcaagaggcctctgaagactttacatagggaagaattttgttcccaaattccaa 19912355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 20431306 - 20431249
Alignment:
Q  22 gaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttcc 79  Q
    ||||||||||||||| |||  |||| |||||| | || ||||||||||||||||||||    
T  20431306 gaagattcaagaggcgtcatgagactttacagtgggaggaattatgttcccaagttcc 20431249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 31284551 - 31284620
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagaca 85  Q
    ||||||||||||||||||||  ||| ||||| ||| |||| ||  ||||||||||||| || ||||||||    
T  31284551 aagaatgaagattcaagaggtttcaaaagactttaaagagggagaaattatgttcccaggtcccaagaca 31284620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 88690 - 88842
Alignment:
Q  15 gaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaagg 114  Q
    ||||||||||||||||| || | ||||||||| |||||||| ||  ||||||||||||||||||||||||||| ||||| |||||||||| |  || |||    
T  88690 gaagaatgaagattcaaaagccctcagaagactttacagagggagaaattatgttcccaagttccaagacatcttacattgaagcaaacaactaaacagg 88789  T
Q  115 cgaag-aaacaagcattttctgcaccaaacacactcacaagtgcccaagcgca 166  Q
    ||||| ||| | |||||||| ||||  |||||| ||| ||| ||||| |||||    
T  88790 cgaagaaaataggcattttcagcacataacacattcagaagcgcccaggcgca 88842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 2e-23; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 48 - 212
Target Start/End: Original strand, 19722063 - 19722226
Alignment:
Q  48 ttacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaacaagcattttctgcaccaaacacac 147  Q
    |||||||| || |||||||||||||| ||| |||||||||  |||||||||||||||  |||||||||||||||||| |||||||  |||||  || |||    
T  19722063 ttacagagggaggaattatgttccca-gttgcaagacatctaacatagaagcaaacatgcgaaaaggcgaagaaacatgcattttaagcacctgacgcac 19722161  T
Q  148 tcacaagtgcccaagcgcatagagttggatgccaggggcccatgaatttacactagggcacctga 212  Q
    ||||| |  |||| |||||||||   ||| |||| |  |||| ||||||||||||||||||||||    
T  19722162 tcacatgcacccacgcgcatagaaggggacgccatgcacccaagaatttacactagggcacctga 19722226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 8246473 - 8246353
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| || |||||| |||||||| ||  ||||||||||||||||||||||||||   |||| |||  |||||||  ||    
T  8246473 agatgaagaatgaagattcaagaggcctcggaagactttacagagggacaaattatgttcccaagttccaagacatttcacattgaaaaaaacacctcaa 8246374  T
Q  111 aaggcgaagaaacaagcattt 131  Q
    ||||| || | ||||||||||    
T  8246373 aaggcaaaaacacaagcattt 8246353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 23644568 - 23644688
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||| ||||||||||||||||||| ||||| |||   ||  | ||||| |||||||||||||||||| | | ||||||||||||||||||  ||    
T  23644568 agatgaagaaggaagattcaagaggcatcataagactttaagaaggtaggaattctgttcccaagttccaagaaaacttacatagaagcaaacacctaaa 23644667  T
Q  111 aaggcgaagaaacaagcattt 131  Q
    ||| |||||||||| ||||||    
T  23644668 aagacgaagaaacaggcattt 23644688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 9898118 - 9898229
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    ||||||||||| |||||||||||||| ||||||||  ||||| ||  | ||||| | ||| |||||||||||||||| ||||| ||||||||||||   |    
T  9898118 agatgaagaataaagattcaagaggcctcagaagaatttacaaaggaaggaattttattctcaagttccaagacatcttacattgaagcaaacacctata 9898217  T
Q  111 aaggcgaagaaa 122  Q
    ||||||||||||    
T  9898218 aaggcgaagaaa 9898229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 10822077 - 10821964
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    |||||||||||||| |||| ||| ||||||||||| ||  | ||||||||||||||||| |||||||||| || || |||||||||| |  ||||| |||    
T  10822077 gaatgaagattcaaaaggcctcaaaagacattacaaaggaaggaattatgttcccaagtcccaagacatcttatatggaagcaaacatcgaaaaagacga 10821978  T
Q  118 agaaacaagcattt 131  Q
     |||||| ||||||    
T  10821977 tgaaacatgcattt 10821964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 21687379 - 21687499
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    ||||||||||||||||| ||||| || | || ||||  ||||||| || ||||||||||||||| |||||||||||| |||||  ||| ||||| |  ||    
T  21687379 agatgaagaatgaagatacaagatgccttaggagactctacagagggaggaattatgttcccaatttccaagacatcctacattaaagaaaacatctcaa 21687478  T
Q  111 aaggcgaagaaacaagcattt 131  Q
    ||||| |||||||| ||||||    
T  21687479 aaggcaaagaaacaggcattt 21687499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 6629224 - 6629299
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacat 86  Q
    |||||||||||||||||||||||||| ||||||||| ||||| || || ||||||| |||||||  ||||||||||    
T  6629224 agatgaagaatgaagattcaagaggcctcagaagactttacaaagggaggaattatattcccaatgtccaagacat 6629299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 21060650 - 21060748
Alignment:
Q  8 gagagatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    ||||||| ||||||||||||||||||||| ||||||||  |||||||  ||  |||||| ||||||||  |||||||||| || || ||||||||||||    
T  21060650 gagagatcaagaatgaagattcaagaggcctcagaagatgttacagaaggagaaattattttcccaagggccaagacatcttatatggaagcaaacacc 21060748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 21079967 - 21080065
Alignment:
Q  8 gagagatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    ||||||| ||||||||||||||||||||| | ||||||  |||||||  ||  |||||| ||||||||| |||||||||| || || ||||||||||||    
T  21079967 gagagattaagaatgaagattcaagaggcctaagaagatgttacagaaggagaaattattttcccaagtgccaagacatcttatatggaagcaaacacc 21080065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 30356110 - 30355996
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||| |||||||||||||||||| || |||||||| ||||||||| ||  | |||| ||| || || ||||| |||| || || ||||||||||||| ||    
T  30356110 agatcaagaatgaagattcaagaagcctcagaagatattacagagggagaacttatattctcatgtcccaaggcatcttatatggaagcaaacacccaaa 30356011  T
Q  111 aaggcgaagaaacaa 125  Q
    ||| |||||||||||    
T  30356010 aagacgaagaaacaa 30355996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 32759806 - 32759696
Alignment:
Q  21 tgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaaga 120  Q
    |||||||||||||||| || |||||| ||||| || || ||||| |||||||| || |||||||||| || || ||||||||||||| | ||  ||||||    
T  32759806 tgaagattcaagaggcctcggaagacgttacaaagggaggaattttgttcccaggtcccaagacatcttatatggaagcaaacacccaagaaaacgaaga 32759707  T
Q  121 aacaagcattt 131  Q
    |||| ||||||    
T  32759706 aacatgcattt 32759696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 3357984 - 3357869
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggc 115  Q
    ||||||||||||||||  ||| ||| ||||||||||| || || ||||| |||||||||||||||||||||  ||  | ||||||||| | | ||||| |    
T  3357984 aagaatgaagattcaaagggcctcaaaagacattacaaagggaggaattttgttcccaagttccaagacatgttatgtggaagcaaacgcacaaaaagac 3357885  T
Q  116 gaagaaacaagcattt 131  Q
    ||||||| || |||||    
T  3357884 gaagaaaaaaacattt 3357869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 19246123 - 19246012
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||  || ||| || ||||| |||||  |||| ||||||| |||| ||||||||| ||||  |||| |||||||  ||    
T  19246123 agatgaagaatgaagattcaagaggtctcggaaaactttacaaagagagaaattttgttccctagtttcaagacatcttacaatgaagaaaacacctcaa 19246024  T
Q  111 aaggcgaagaaa 122  Q
     |||||||||||    
T  19246023 taggcgaagaaa 19246012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 10505020 - 10504926
Alignment:
Q  19 aatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaag 113  Q
    |||||||||||| ||| | || ||||||||||||||| ||  |||| ||||||||||| |||||||||| || ||  |||||||||||| |||||    
T  10505020 aatgaagattcatgagacctcggaagacattacagagggacaaattttgttcccaagtcccaagacatcttatatgaaagcaaacacccaaaaag 10504926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 22404509 - 22404575
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaag 82  Q
    ||||||||||||||||||||| |||| |||| |||||| | || ||||| |||||||||||| ||||    
T  22404509 aagaatgaagattcaagaggcctcaggagactttacagtgggaggaattttgttcccaagtttcaag 22404575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 9387457 - 9387400
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaag 75  Q
    ||||| ||||||||||||| ||||||||||||||| | ||| || |||||||||||||    
T  9387457 gaatgtagattcaagaggcctcagaagacattacaaacagaggagttatgttcccaag 9387400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 21547028 - 21547134
Alignment:
Q  22 gaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagt---tccaagacatcatacatagaagcaaacacccgaaaaggcgaa 118  Q
    ||||||||||||||| ||| ||||||||||| || || ||||| ||||| |||||    |||||||||| || || |||| |||||||| ||||| ||||    
T  21547028 gaagattcaagaggcctcaaaagacattacaaagggaggaattttgttcgcaagtcccaccaagacatcttatatggaag-aaacacccaaaaagtcgaa 21547126  T
Q  119 gaaacaag 126  Q
    ||||||||    
T  21547127 gaaacaag 21547134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 22569653 - 22569608
Alignment:
Q  61 aattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    ||||||||||||||||||||||||||| ||||| |||| |||||||    
T  22569653 aattatgttcccaagttccaagacatcttacattgaagaaaacacc 22569608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 9339227 - 9339286
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttc 70  Q
    ||||||| ||||||||||||||||||||  |||||||||||| || ||  ||||||||||    
T  9339227 agatgaaaaatgaagattcaagaggcatttgaagacattacaaagggagtaattatgttc 9339286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 8038301 - 8038375
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagaca 85  Q
    |||| ||||||||||||||||||||| ||| ||||  |||||||| ||  || |||||||||| ||| |||||||    
T  8038301 agatcaagaatgaagattcaagaggcctcataagattttacagagggagaaaatatgttcccaggtttcaagaca 8038375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 12991533 - 12991473
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattac-agagagatgaattatgttcccaagt 76  Q
    ||||||||||||||||||||| ||||||||| |||| | || || |||||||||||||||||    
T  12991533 aagaatgaagattcaagaggcctcagaagac-ttacaacagggaggaattatgttcccaagt 12991473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 10342 - 10453
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    |||||||||||||||||||||||||| ||| ||||| | ||| || || ||||||| |||||||||||||| ||||| ||||| |||| |||||||  ||    
T  10342 agatgaagaatgaagattcaagaggcctcaaaagacttcacaaagggaggaattatattcccaagttccaaaacatcttacattgaagaaaacaccataa 10441  T
Q  111 aaggcgaagaaa 122  Q
    ||||| ||||||    
T  10442 aaggcaaagaaa 10453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 16718 - 16822
Alignment:
Q  13 atgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattat-gttcccaagttccaagacatcatacatagaagcaaacacccgaaa 111  Q
    |||||||||||||||||||||||| |||||| |  |||||||| || ||||| | |||||||||||||||| |||| |||||| |||||||||||| |||    
T  16718 atgaagaatgaagattcaagaggcctcagaacatgttacagaggga-gaattcttgttcccaagttccaagtcatcttacataaaagcaaacaccc-aaa 16815  T
Q  112 aggcgaa 118  Q
    |||||||    
T  16816 aggcgaa 16822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 6278 - 6200
Alignment:
Q  29 caagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacaccc 107  Q
    |||||||| ||||||||| ||||| || |||||||||||||| |||||||||||||||| || || |||||||||||||    
T  6278 caagaggcctcagaagacgttacaaagtgatgaattatgttctcaagttccaagacatcttatatggaagcaaacaccc 6200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 14036 - 14148
Alignment:
Q  10 gagatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccga 109  Q
    |||||||||||| |||||||||||||| ||| || || ||||| || ||| |||| | ||| |||||||||||||||| || ||  |||||||||||| |    
T  14036 gagatgaagaatcaagattcaagaggcctcaaaatacgttacaaagggattaattctcttctcaagttccaagacatcttatatgaaagcaaacacccaa 14135  T
Q  110 aaaggcgaagaaa 122  Q
    |||| ||||||||    
T  14136 aaagacgaagaaa 14148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 5085 - 5196
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaa 110  Q
    ||||||||||  || ||||||||||| ||||||||| |||||||| || ||||| | ||||| |||||||| ||||| ||||| |||| |||||||  ||    
T  5085 agatgaagaagcaaaattcaagaggcctcagaagactttacagagggaggaatttttttccctagttccaatacatcttacattgaagaaaacacctcaa 5184  T
Q  111 aaggcgaagaaa 122  Q
     |||||||||||    
T  5185 gaggcgaagaaa 5196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 13725 - 13819
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    |||||||||| ||| ||||||||||||||||||||| ||||| |  || ||||| |||||||||||| ||| ||||| ||||| |||| |||||||    
T  13725 agatgaagaaggaaaattcaagaggcatcagaagactttacaaatggaggaatt-tgttcccaagtttcaatacatcttacattgaagaaaacacc 13819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 13050 - 13163
Alignment:
Q  18 gaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcga 117  Q
    ||||||||||||||||||| || ||||  |||||| || ||  |||||||||| ||||| | |||||| | || || ||||||||||||| ||||| |||    
T  13050 gaatgaagattcaagaggcctcggaaggaattacaaagggagaaattatgttctcaagtcctaagacaccttatatggaagcaaacacccaaaaagacga 13149  T
Q  118 agaaacaagcattt 131  Q
    ||||||| ||||||    
T  13150 agaaacatgcattt 13163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 11935 - 11847
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaaca 104  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||  |||||| ||| || || |||||||||| || || || |||||||    
T  11935 aagaatgaagattcaagaggcatcaaaagacgttacagagggagaaattatattcacaggtcccaagacatcttatatggaggcaaaca 11847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 202087 - 202164
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacat 93  Q
    |||| ||||||||||| |||| ||  |||||||||||||| || ||||| |||||||||||||||||||||| |||||    
T  202087 aagattgaagattcaataggcctccaaagacattacagagggaggaattttgttcccaagttccaagacatcttacat 202164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 41185 - 41090
Alignment:
Q  11 agatgaagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaagacatcatacatagaagcaaacacc 106  Q
    |||||||||||| ||||||||||||| ||| ||||| ||||| |  || ||||| |||||  ||||| ||||||||| ||||| |||| |||||||    
T  41185 agatgaagaatggagattcaagaggcctcataagactttacaaaaggaggaattttgttctaaagtttcaagacatcttacattgaagaaaacacc 41090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 21318 - 21256
Alignment:
Q  16 aagaatgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttc 78  Q
    |||||||||||| |||||||| |||| |||| |||||| | || ||||| |||||||||||||    
T  21318 aagaatgaagatacaagaggcctcaggagactttacagtgggaggaattttgttcccaagttc 21256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 95461 - 95399
Alignment:
Q  20 atgaagattcaagaggcatcagaagacattacagagagatgaattatgttcccaagttccaag 82  Q
    ||||||||||||||||  |||| |||| ||||| || || |||||||||||||||||| ||||    
T  95461 atgaagattcaagaggtctcaggagactttacatagggaggaattatgttcccaagtttcaag 95399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1339 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 1084 - 1023
Alignment:
Q  61 aattatgttcccaagttccaagacatcatacatagaagcaaacacccgaaaaggcgaagaaa 122  Q
    ||||||||||||||||| ||||||| | ||||||||| ||||| ||  |||| |||||||||    
T  1084 aattatgttcccaagtttcaagacaacttacatagaaacaaacgcctaaaaatgcgaagaaa 1023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University