View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2013_low_31 (Length: 245)

Name: NF2013_low_31
Description: NF2013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2013_low_31
NF2013_low_31
[»] chr4 (35 HSPs)
chr4 (1-166)||(757473-757638)
chr4 (1-85)||(701633-701717)
chr4 (1-85)||(769932-770016)
chr4 (1-85)||(35060427-35060511)
chr4 (1-86)||(756486-756571)
chr4 (1-86)||(35055332-35055417)
chr4 (1-85)||(702624-702708)
chr4 (1-85)||(770923-771007)
chr4 (1-89)||(16038271-16038359)
chr4 (1-83)||(16039652-16039734)
chr4 (4-98)||(4892088-4892182)
chr4 (17-89)||(40681491-40681563)
chr4 (10-85)||(11038577-11038652)
chr4 (16-87)||(36220589-36220660)
chr4 (10-88)||(51645955-51646032)
chr4 (1-88)||(33075192-33075277)
chr4 (10-84)||(36219408-36219481)
chr4 (19-88)||(9207770-9207839)
chr4 (19-92)||(25764355-25764428)
chr4 (10-51)||(51399250-51399291)
chr4 (18-82)||(9086290-9086354)
chr4 (32-88)||(9203564-9203620)
chr4 (35-86)||(11822983-11823034)
chr4 (19-86)||(19630762-19630829)
chr4 (19-86)||(31208486-31208553)
chr4 (19-86)||(36611041-36611108)
chr4 (17-86)||(14525927-14525996)
chr4 (19-88)||(32617589-32617658)
chr4 (18-87)||(41845499-41845568)
chr4 (10-87)||(55620191-55620268)
chr4 (10-87)||(55627495-55627572)
chr4 (1-84)||(4890827-4890911)
chr4 (32-72)||(27509870-27509910)
chr4 (32-72)||(32617349-32617389)
chr4 (35-87)||(52766151-52766203)
[»] chr3 (37 HSPs)
chr3 (86-166)||(36989739-36989819)
chr3 (86-166)||(37015179-37015259)
chr3 (1-84)||(21817374-21817457)
chr3 (4-84)||(21815909-21815989)
chr3 (5-90)||(14859111-14859196)
chr3 (10-87)||(27688484-27688561)
chr3 (28-95)||(20184438-20184505)
chr3 (1-88)||(36982648-36982734)
chr3 (1-88)||(37008087-37008173)
chr3 (17-87)||(32304230-32304300)
chr3 (17-87)||(39992484-39992554)
chr3 (10-87)||(27695558-27695635)
chr3 (19-85)||(42213524-42213590)
chr3 (19-85)||(51890980-51891046)
chr3 (19-88)||(12061621-12061690)
chr3 (32-85)||(17509464-17509517)
chr3 (32-85)||(42540163-42540216)
chr3 (19-87)||(18024909-18024977)
chr3 (4-51)||(4953410-4953457)
chr3 (17-88)||(45940670-45940741)
chr3 (18-89)||(49221503-49221574)
chr3 (19-86)||(53204833-53204900)
chr3 (16-86)||(20185802-20185872)
chr3 (19-85)||(30267763-30267829)
chr3 (19-85)||(38771610-38771676)
chr3 (32-86)||(40941838-40941892)
chr3 (19-85)||(43464812-43464878)
chr3 (34-86)||(1069831-1069883)
chr3 (19-87)||(13301948-13302016)
chr3 (19-87)||(13312604-13312672)
chr3 (10-86)||(24244756-24244832)
chr3 (35-87)||(28004264-28004316)
chr3 (26-66)||(38771376-38771416)
chr3 (17-85)||(40503722-40503790)
chr3 (32-72)||(40941614-40941654)
chr3 (10-66)||(49220374-49220430)
chr3 (19-87)||(51891292-51891360)
[»] chr1 (27 HSPs)
chr1 (1-85)||(51597961-51598045)
chr1 (1-86)||(16962009-16962094)
chr1 (1-85)||(51599407-51599491)
chr1 (1-85)||(16963400-16963484)
chr1 (10-85)||(46015840-46015915)
chr1 (10-82)||(33333395-33333467)
chr1 (18-86)||(49964139-49964207)
chr1 (20-84)||(50682580-50682644)
chr1 (24-86)||(6242694-6242756)
chr1 (17-87)||(36143125-36143195)
chr1 (10-99)||(33332163-33332252)
chr1 (10-87)||(46014699-46014776)
chr1 (17-86)||(47113104-47113173)
chr1 (17-86)||(32193516-32193585)
chr1 (19-96)||(48225009-48225086)
chr1 (24-88)||(6241250-6241314)
chr1 (17-89)||(45678368-45678440)
chr1 (17-95)||(3798700-3798778)
chr1 (17-87)||(6714693-6714763)
chr1 (19-85)||(10579667-10579733)
chr1 (19-85)||(11652876-11652942)
chr1 (18-87)||(7964111-7964180)
chr1 (17-86)||(9478607-9478676)
chr1 (19-72)||(11652949-11653002)
chr1 (17-86)||(15073414-15073483)
chr1 (10-86)||(10719355-10719431)
chr1 (17-85)||(24326582-24326650)
[»] chr8 (32 HSPs)
chr8 (1-86)||(39270768-39270853)
chr8 (1-88)||(39567060-39567147)
chr8 (1-84)||(45378522-45378605)
chr8 (1-83)||(44633748-44633830)
chr8 (10-88)||(9311018-9311096)
chr8 (1-83)||(39568482-39568564)
chr8 (1-87)||(44632704-44632790)
chr8 (30-85)||(14816570-14816625)
chr8 (30-85)||(14829115-14829170)
chr8 (10-87)||(9312159-9312236)
chr8 (5-80)||(22191884-22191958)
chr8 (32-85)||(13463153-13463206)
chr8 (4-51)||(21015218-21015265)
chr8 (34-85)||(45377427-45377478)
chr8 (19-88)||(4325966-4326035)
chr8 (10-87)||(10134606-10134683)
chr8 (19-88)||(29802157-29802226)
chr8 (32-88)||(29802576-29802632)
chr8 (19-86)||(5876828-5876895)
chr8 (19-90)||(12849959-12850030)
chr8 (19-86)||(21524649-21524716)
chr8 (19-86)||(45467436-45467503)
chr8 (32-86)||(5822030-5822084)
chr8 (32-86)||(12823265-12823319)
chr8 (19-85)||(35103592-35103658)
chr8 (10-92)||(36194620-36194702)
chr8 (17-87)||(43633121-43633191)
chr8 (48-89)||(14819391-14819432)
chr8 (19-87)||(3318030-3318098)
chr8 (19-87)||(6513167-6513234)
chr8 (15-87)||(31933568-31933640)
chr8 (35-87)||(41387560-41387612)
[»] chr7 (26 HSPs)
chr7 (1-84)||(26024888-26024971)
chr7 (1-88)||(21709155-21709242)
chr7 (1-88)||(21710575-21710662)
chr7 (1-85)||(26025840-26025924)
chr7 (10-97)||(45088235-45088322)
chr7 (1-83)||(10990572-10990654)
chr7 (33-87)||(17279449-17279503)
chr7 (17-86)||(30766674-30766743)
chr7 (19-85)||(39383805-39383871)
chr7 (10-87)||(45596867-45596945)
chr7 (16-85)||(10986695-10986764)
chr7 (24-85)||(40738193-40738254)
chr7 (10-83)||(45087067-45087140)
chr7 (19-95)||(8736116-8736192)
chr7 (18-90)||(43704940-43705012)
chr7 (24-83)||(19543492-19543551)
chr7 (4-51)||(24485821-24485868)
chr7 (19-86)||(36701357-36701424)
chr7 (35-82)||(39384166-39384213)
chr7 (18-88)||(8463115-8463185)
chr7 (17-94)||(3217744-3217821)
chr7 (25-66)||(26777823-26777864)
chr7 (19-88)||(45057538-45057607)
chr7 (17-86)||(45457094-45457163)
chr7 (15-82)||(38030332-38030397)
chr7 (17-97)||(47987315-47987395)
[»] scaffold0031 (3 HSPs)
scaffold0031 (1-86)||(129393-129478)
scaffold0031 (1-88)||(123421-123508)
scaffold0031 (1-88)||(134297-134384)
[»] chr6 (25 HSPs)
chr6 (1-87)||(21611913-21611999)
chr6 (5-86)||(21282816-21282897)
chr6 (1-83)||(5659106-5659189)
chr6 (1-79)||(21612855-21612933)
chr6 (1-90)||(5660166-5660254)
chr6 (10-94)||(29744772-29744856)
chr6 (10-86)||(29751123-29751199)
chr6 (17-87)||(12260444-12260514)
chr6 (1-85)||(20489415-20489498)
chr6 (28-88)||(14403685-14403745)
chr6 (17-88)||(20745582-20745653)
chr6 (19-85)||(5645546-5645612)
chr6 (19-87)||(8938884-8938952)
chr6 (19-93)||(6888775-6888849)
chr6 (19-85)||(26841598-26841664)
chr6 (24-86)||(29465754-29465816)
chr6 (32-94)||(31038312-31038374)
chr6 (32-85)||(18700401-18700454)
chr6 (46-87)||(21283922-21283963)
chr6 (24-85)||(29467282-29467343)
chr6 (19-87)||(8286309-8286377)
chr6 (19-87)||(8286682-8286750)
chr6 (35-87)||(8939275-8939327)
chr6 (19-87)||(29836366-29836434)
chr6 (32-72)||(30860186-30860226)
[»] chr2 (31 HSPs)
chr2 (1-86)||(36888337-36888422)
chr2 (1-86)||(36889721-36889806)
chr2 (16-88)||(34166840-34166913)
chr2 (17-88)||(7184878-7184949)
chr2 (29-88)||(35738360-35738419)
chr2 (17-86)||(19297526-19297595)
chr2 (19-88)||(20686669-20686738)
chr2 (19-88)||(38578174-38578243)
chr2 (17-82)||(40468049-40468114)
chr2 (19-87)||(15130046-15130114)
chr2 (10-84)||(13809426-13809499)
chr2 (19-88)||(7031802-7031871)
chr2 (32-85)||(8028966-8029019)
chr2 (15-87)||(13810568-13810638)
chr2 (18-87)||(28190479-28190548)
chr2 (19-95)||(7182340-7182416)
chr2 (19-87)||(27516157-27516225)
chr2 (19-86)||(18905002-18905069)
chr2 (17-88)||(26424814-26424885)
chr2 (19-86)||(26892463-26892530)
chr2 (19-86)||(26897902-26897969)
chr2 (17-95)||(4602807-4602885)
chr2 (19-89)||(18904595-18904665)
chr2 (10-72)||(20899545-20899607)
chr2 (32-85)||(3603504-3603557)
chr2 (35-96)||(6645879-6645940)
chr2 (35-88)||(31309775-31309828)
chr2 (19-88)||(36099290-36099359)
chr2 (19-87)||(7032148-7032216)
chr2 (32-84)||(10413995-10414047)
chr2 (35-87)||(27516549-27516601)
[»] scaffold0394 (1 HSPs)
scaffold0394 (10-91)||(14264-14346)
[»] scaffold0029 (2 HSPs)
scaffold0029 (19-85)||(71821-71887)
scaffold0029 (18-86)||(70668-70736)
[»] chr5 (29 HSPs)
chr5 (18-88)||(19718881-19718951)
chr5 (19-94)||(37812222-37812297)
chr5 (17-88)||(38384865-38384936)
chr5 (19-85)||(8127472-8127538)
chr5 (18-88)||(42026655-42026725)
chr5 (17-86)||(6793766-6793835)
chr5 (19-88)||(14858567-14858636)
chr5 (19-88)||(22803582-22803651)
chr5 (10-51)||(35463855-35463896)
chr5 (19-86)||(1155963-1156030)
chr5 (18-85)||(4349495-4349562)
chr5 (19-86)||(36442533-36442600)
chr5 (19-85)||(4349867-4349933)
chr5 (19-85)||(6172333-6172399)
chr5 (19-85)||(9040743-9040809)
chr5 (19-85)||(9438237-9438303)
chr5 (32-86)||(10570031-10570085)
chr5 (35-89)||(16791967-16792021)
chr5 (19-85)||(42382165-42382231)
chr5 (18-51)||(14662662-14662695)
chr5 (10-51)||(18508814-18508855)
chr5 (35-88)||(21289538-21289591)
chr5 (17-86)||(25333178-25333247)
chr5 (32-85)||(31369932-31369985)
chr5 (35-95)||(42026272-42026333)
chr5 (19-87)||(4959559-4959627)
chr5 (19-83)||(37812543-37812607)
chr5 (24-88)||(37966811-37966875)
chr5 (35-87)||(43476446-43476498)
[»] scaffold0220 (1 HSPs)
scaffold0220 (16-85)||(25963-26032)
[»] scaffold0135 (7 HSPs)
scaffold0135 (32-88)||(5862-5918)
scaffold0135 (32-88)||(10077-10133)
scaffold0135 (32-88)||(14292-14348)
scaffold0135 (32-88)||(18507-18563)
scaffold0135 (32-88)||(22722-22778)
scaffold0135 (32-88)||(26937-26993)
scaffold0135 (34-88)||(1649-1703)
[»] scaffold0026 (2 HSPs)
scaffold0026 (35-87)||(99597-99649)
scaffold0026 (35-88)||(99988-100041)
[»] scaffold0002 (2 HSPs)
scaffold0002 (6-66)||(428989-429049)
scaffold0002 (38-87)||(429159-429208)
[»] scaffold0295 (1 HSPs)
scaffold0295 (19-86)||(8208-8275)
[»] scaffold0017 (1 HSPs)
scaffold0017 (18-88)||(172902-172972)
[»] scaffold0006 (1 HSPs)
scaffold0006 (17-86)||(83376-83445)
[»] scaffold0194 (1 HSPs)
scaffold0194 (10-86)||(19229-19304)


Alignment Details
Target: chr4 (Bit Score: 166; Significance: 6e-89; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 757473 - 757638
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaattacat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  757473 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaattacat 757572  T
Q  101 gtttgaagtatgcggacttcactagttgaaacttgtaatgagagccgaaagtatggcggggatgca 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  757573 gtttgaagtatgcggacttcactagttgaaacttgtaatgagagccgaaagtatggcggggatgca 757638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 701717 - 701633
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  701717 aaaggactcaaacggactttttattaattatgggaccaaagcgataccaaaaaataagttaagggacgaaaatagcaattaagcc 701633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 770016 - 769932
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  770016 aaaggactcaaacggactttttattaattatgggaccaaagcgataccaaaaaataagttaagggacgaaaatagcaattaagcc 769932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 35060427 - 35060511
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  35060427 aaaggactcaaacggactttttattaattatgggaccaaagcgataccaaaaaattagttaagggacgaaaatagcaattaagcc 35060511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 756571 - 756486
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||||||| || | ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  756571 aaaggacttaagcggactttttattaattatgggaccaaagcgataccaaaaaattagttaagggacgaaaatagcaattaagcct 756486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35055417 - 35055332
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  35055417 aaaggactcaaatggactttttattaattatgggaccaaagcgataccaaaaaattagttaagggacgaaaataacaattaagcct 35055332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 702624 - 702708
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||||| || | ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  702624 aaaggacttaagcggactttttattaattatgggaccaaagcgataccaaaaaattagttaagggacgaaaatagcaattaagcc 702708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 770923 - 771007
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||||| || | ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  770923 aaaggacttaagcggactttttattaattatgggaccaaagcgataccaaaaaattagttaagggacgaaaatagcaattaagcc 771007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16038359 - 16038271
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaat 89  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||    
T  16038359 aaaggactcaaatggattttttattaattatgggaccaaagcgataccaaaaaattagttaagggacgaaaataacaattaagcctaat 16038271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 16039652 - 16039734
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaag 83  Q
    ||||||||||||| ||||||||||||||||||||||| || |||||||||||||| ||||||||||  |||||||||||||||    
T  16039652 aaaggactcaaacggactttttattaattatgggaccgaaacgataccaaaaaattagttaagggacaaaaatagcaattaag 16039734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 4892088 - 4892182
Alignment:
Q  4 ggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaattac 98  Q
    |||||||||| ||  |||||||| ||||| |||| ||||||||| |||||| || ||||||||||||||||||||||||||| ||| || |||||    
T  4892088 ggactcaaacagatcttttattacttatgcgacctaagcgatactaaaaaaaaacttaagggatgaaaatagcaattaagcccaatttttattac 4892182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 40681491 - 40681563
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaat 89  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||    
T  40681491 cttttttttacttaagggaccaaagcgataccaaataataacttaagggacgaaaagagcaattaagcctaat 40681563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 11038652 - 11038577
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||| |||||||| ||| ||||||||||||||| |||||||||||| || |||||||  |||||||||||||||||    
T  11038652 aaacagacttttttttagttatgggaccaaagcaataccaaaaaattagctaagggactaaaatagcaattaagcc 11038577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 36220589 - 36220660
Alignment:
Q  16 actttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||||| ||| ||||||||||||| |||||||||||||| |||||||| |  |||||||||||||||||||    
T  36220589 acttttttttagttatgggaccaaaacgataccaaaaaattagttaaggtactaaaatagcaattaagccta 36220660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 51645955 - 51646032
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||| |||||||| ||| ||||||||||||| |||||||||||||| || |||||||  ||||||||||||||||||||    
T  51645955 aaacggacttttt-ttagttatgggaccaaaccgataccaaaaaattagctaagggactaaaatagcaattaagcctaa 51646032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33075192 - 33075277
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||| |||||||| |||||||||||| ||||||||||||||||| ||  ||||  || |||||||| |||||||| |||| |||||||    
T  33075192 aaagtactcaaacggactttttattacttatgggaccaaagcgacacttaaaa--aaattaagggacgaaaatagaaattgagcctaa 33075277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 36219481 - 36219408
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagc 84  Q
    |||| |||||||| ||| ||||||||||||| ||||||  |||||| ||||||||||  ||||||||||||||||    
T  36219481 aaacggacttttt-ttagttatgggaccaaaccgatactcaaaaattagttaagggactaaaatagcaattaagc 36219408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 9207770 - 9207839
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||| || ||| ||||||||||||| |||||||||||||||| ||||  |||| || ||||||||||||    
T  9207770 ttttaatagttaagggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagcctaa 9207839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 25764428 - 25764355
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatatt 92  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||| |||||    
T  25764428 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccttatatt 25764355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 51399291 - 51399250
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaa 51  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  51399291 aaacagactttttattacttatgggaccaaagcgataccaaa 51399250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 9086354 - 9086290
Alignment:
Q  18 tttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaa 82  Q
    ||||| ||| ||| |||||||||||||||||||| ||||| |||||||| ||||| || ||||||    
T  9086354 ttttttttacttaagggaccaaagcgataccaaataataacttaagggacgaaaagagaaattaa 9086290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 9203564 - 9203620
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||||| |||||||||||||||| ||||  |||| || ||||||||||||    
T  9203564 gggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagcctaa 9203620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 11822983 - 11823034
Alignment:
Q  35 accaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||||| ||| |||||||||||||||||||||| |||| || ||||||||||    
T  11822983 accaaaacgaaaccaaaaaataagttaagggatcaaaagagtaattaagcct 11823034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 19630829 - 19630762
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||    
T  19630829 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 19630762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 31208486 - 31208553
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||    
T  31208486 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 31208553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 36611108 - 36611041
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||    
T  36611108 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggactaaaagagtaattaagcct 36611041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 14525927 - 14525996
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||||| ||| ||| |||||||||||||||||||  ||  ||||||||||| |||| |||| ||||||||    
T  14525927 cttttttttagttaagggaccaaagcgataccaattaaatagttaagggatcaaaagagcatttaagcct 14525996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 32617589 - 32617658
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||  || ||||||||||||    
T  32617589 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaatgagtaattaagcctaa 32617658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 41845568 - 41845499
Alignment:
Q  18 tttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||| ||| ||| |||||||||||||||||||  ||| ||||||||||  |||| |||| |||||||||    
T  41845568 ttttttttagttaagggaccaaagcgataccaattaattagttaagggaccaaaagagcatttaagccta 41845499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 55620268 - 55620191
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||| |||||||||||| ||||||||||||| ||||||   |||  |||||||||||  |||| |||| |||||||||    
T  55620268 aaacagactttttattacttatgggaccaaaccgatacttgaaatcaagttaagggaccaaaagagcatttaagccta 55620191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 55627572 - 55627495
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||| |||||||||||| ||||||||||||| ||||||   |||  |||||||||||  |||| |||| |||||||||    
T  55627572 aaacagactttttattacttatgggaccaaaccgatacttgaaatcaagttaagggaccaaaagagcatttaagccta 55627495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4890911 - 4890827
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaa-aaataagttaagggatgaaaatagcaattaagc 84  Q
    |||||||||||||  || |||||||| |||| ||  ||||||||||| ||| |||  | |||||||| |||||||||||||||||    
T  4890911 aaaggactcaaacaaaccttttattacttataggggcaaagcgatactaaagaaactacttaagggacgaaaatagcaattaagc 4890827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 27509870 - 27509910
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaa 72  Q
    ||||||||| ||| |||||||||||||||||||||| ||||    
T  27509870 gggaccaaaacgaaaccaaaaaataagttaagggatcaaaa 27509910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 32617389 - 32617349
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaa 72  Q
    ||||||||| ||| |||||||||||||||||||||| ||||    
T  32617389 gggaccaaaacgaaaccaaaaaataagttaagggatcaaaa 32617349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 52766203 - 52766151
Alignment:
Q  35 accaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||| ||| |||||||||||||||||||||  |||| || |||||||||||    
T  52766203 accaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 52766151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 36989819 - 36989739
Alignment:
Q  86 taatattaattacatgtttgaagtatgcggacttcactagttgaaacttgtaatgagagccgaaagtatggcggggatgca 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36989819 taatattaattacatgtttgaagtatgcggacttcactagttgaaacttgtaatgagagccgaaagtatggcggggatgca 36989739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 37015259 - 37015179
Alignment:
Q  86 taatattaattacatgtttgaagtatgcggacttcactagttgaaacttgtaatgagagccgaaagtatggcggggatgca 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37015259 taatattaattacatgtttgaagtatgcggacttcactagttgaaacttgtaatgagagccgaaagtatggcggggatgca 37015179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21817374 - 21817457
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagc 84  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  21817374 aaaggactcaaacagactttttattaattatgggaccaaagcgataccaaaaaattagttaagggatgaaaatagtaattaagc 21817457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 21815989 - 21815909
Alignment:
Q  4 ggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagc 84  Q
    |||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  21815989 ggactcaaacggactttttattaattatggaaccaaagcgatactaaaaaattagttaagggacgaaaatagcaattaagc 21815909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 14859111 - 14859196
Alignment:
Q  5 gactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaata 90  Q
    ||||||||  |||||||||||| |||||| ||||||||||||| ||||||  | |||||||| |||||||||||||||||||||||    
T  14859111 gactcaaatagactttttattacttatggaaccaaagcgatactaaaaaaatatttaagggaagaaaatagcaattaagcctaata 14859196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 27688561 - 27688484
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||| |||||||| ||| ||||||||||||| |||||||||| ||| ||||||||||  |||||||||||||||||||    
T  27688561 aaacggacttttttttagttatgggaccaaaccgataccaaataattagttaagggactaaaatagcaattaagccta 27688484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 20184505 - 20184438
Alignment:
Q  28 ttatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaat 95  Q
    ||||||||||||| |||||||||||||| ||||||||||  |||||| ||||||||||||||| ||||    
T  20184505 ttatgggaccaaaccgataccaaaaaattagttaagggactaaaataacaattaagcctaataataat 20184438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36982734 - 36982648
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||  ||||| || |||||||| |||||||| |||| |||||||    
T  36982734 aaaggactcaaacagactttttattacttatgggaccaaagcgacacttaaaaa-aaattaagggacgaaaatagaaattgagcctaa 36982648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 37008173 - 37008087
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||  ||||| || |||||||| |||||||| |||| |||||||    
T  37008173 aaaggactcaaacagactttttattacttatgggaccaaagcgacacttaaaaa-aaattaagggacgaaaatagaaattgagcctaa 37008087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 32304300 - 32304230
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||    
T  32304300 cttttttttacttaagggaccaaagcgataccaaataataacttaagggacgaaaagagcaattaagccta 32304230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 39992484 - 39992554
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||| ||||||||||||| |||| ||||||||||||| ||||||||||  ||||||| |||||||||||    
T  39992484 cttttttttaattatgggacaaaagtgataccaaaaaattagttaagggactaaaatagtaattaagccta 39992554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 27695558 - 27695635
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||| |||||||| | | ||||||||||||| |||||||||| ||| ||||||||||  |||||||||||||||||||    
T  27695558 aaacggactttttttcagttatgggaccaaaccgataccaaataattagttaagggactaaaatagcaattaagccta 27695635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 42213524 - 42213590
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| |||||| || |||||| ||| ||||||||||||||||||||| ||||| || |||||||||    
T  42213524 ttttaataattaaggaaccaaaacgaaaccaaaaaataagttaagggacgaaaaaagtaattaagcc 42213590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 51891046 - 51890980
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||| |||| || |||||||||    
T  51891046 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggatcaaaagagtaattaagcc 51890980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 12061690 - 12061621
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||||    
T  12061690 ttttaatagttaagggaccaaaacgacaccaaaaaataagttaagggaccaaaagagtaattaagcctaa 12061621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 17509517 - 17509464
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||||||||||||||||| ||||| |||||||| ||||| | ||||||||||    
T  17509517 gggaccaaagcgataccaaataataacttaagggacgaaaagaacaattaagcc 17509464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 42540216 - 42540163
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||||||||||||||||| ||||| |||||||| ||||| || |||||||||    
T  42540216 gggaccaaagcgataccaaataataacttaagggacgaaaagagtaattaagcc 42540163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 18024909 - 18024977
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  ||| ||| |||||||||||    
T  18024909 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaattagtaattaagccta 18024977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 4953410 - 4953457
Alignment:
Q  4 ggactcaaactgactttttattaattatgggaccaaagcgataccaaa 51  Q
    ||||| |||| |||||||||||| ||||||||||||| ||||||||||    
T  4953410 ggacttaaacagactttttattacttatgggaccaaaacgataccaaa 4953457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 45940670 - 45940741
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||||| ||| ||| |||||||||||||||||||  ||  ||||||||||  ||||||||| ||||||||||    
T  45940670 cttttttttagttaagggaccaaagcgataccaattaaatagttaagggaccaaaatagcatttaagcctaa 45940741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 49221574 - 49221503
Alignment:
Q  18 tttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaat 89  Q
    ||||| ||| ||||||||| ||  |||||||||||||| ||||||||||  |||||| ||||||| ||||||    
T  49221574 ttttttttagttatgggactaacccgataccaaaaaattagttaagggacaaaaataacaattaaacctaat 49221503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 53204833 - 53204900
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| |||||| ||||||||| ||| || ||||||||||||||||||  |||| || ||||||||||    
T  53204833 ttttaataattaagggaccaaaacgaaactaaaaaataagttaagggagcaaaagagtaattaagcct 53204900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 20185802 - 20185872
Alignment:
Q  16 actttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||||| ||| |||||||| |||| |||||| ||||||| || ||| |||  ||||||||||||||||||    
T  20185802 acttttttttagttatgggatcaaaccgatacaaaaaaattaggtaatggactaaaatagcaattaagcct 20185872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 30267763 - 30267829
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| || ||| |||| |||| ||| |||||||||||||||||||||| |||| || |||||||||    
T  30267763 ttttaatagttaagggatcaaaacgaaaccaaaaaataagttaagggatcaaaagagtaattaagcc 30267829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 38771610 - 38771676
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||    
T  38771610 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 38771676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 40941838 - 40941892
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||||||| ||| |||||||||||||||||||||| |||  || ||||||||||    
T  40941838 gggaccaaaacgaaaccaaaaaataagttaagggatcaaatgagtaattaagcct 40941892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 43464878 - 43464812
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||||| |||||||||||||||||||||||| ||  | ||||||||  |||| |||| |||||||    
T  43464878 ttttattacttatgggaccaaagcgataccaaataaatacttaagggaccaaaagagcatttaagcc 43464812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 1069883 - 1069831
Alignment:
Q  34 gaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||||| ||| |||||||||||| ||||||||| |||| || ||||||||||    
T  1069883 gaccaaaacgaaaccaaaaaataatttaagggatcaaaagagtaattaagcct 1069831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 13301948 - 13302016
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||||| ||| |||||||||||||||||||| ||  | ||||||||  |||| |||| |||||||||    
T  13301948 ttttattacttacgggaccaaagcgataccaaataaatacttaagggaccaaaagagcatttaagccta 13302016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 13312604 - 13312672
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||||| ||| |||||||||||||||||||| ||  | ||||||||  |||| |||| |||||||||    
T  13312604 ttttattacttacgggaccaaagcgataccaaataaatacttaagggaccaaaagagcatttaagccta 13312672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 24244756 - 24244832
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||| ||| |||||||| |||||| | ||||||||||||||| ||  | ||||||||  ||||||||| ||||||||    
T  24244756 aaacggaccttttattacttatggtatcaaagcgataccaaataaatacttaagggaccaaaatagcatttaagcct 24244832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 28004316 - 28004264
Alignment:
Q  35 accaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||| ||| |||||||||||||||||||||  |||| || |||||||||||    
T  28004316 accaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 28004264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 38771416 - 38771376
Alignment:
Q  26 aattatgggaccaaagcgataccaaaaaataagttaaggga 66  Q
    ||||| ||||||||| ||| |||||||||||||||||||||    
T  38771416 aattaagggaccaaaacgaaaccaaaaaataagttaaggga 38771376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 40503722 - 40503790
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||| ||| ||| |||||||||||||||||||  ||  ||||||||||  |||| ||||||||||||    
T  40503722 cttttttttagttaagggaccaaagcgataccaattaaatagttaagggaccaaaagagcaattaagcc 40503790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 40941654 - 40941614
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaa 72  Q
    ||||||||| ||| |||||||||||||||||||||| ||||    
T  40941654 gggaccaaaacgaaaccaaaaaataagttaagggatcaaaa 40941614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 49220374 - 49220430
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaaggga 66  Q
    |||| |||||||||||| ||||||||||||| ||||||   ||| ||||||||||||    
T  49220374 aaacagactttttattatttatgggaccaaaccgatacttgaaattaagttaaggga 49220430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 51891292 - 51891360
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||| ||||    
T  51891292 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaaaccta 51891360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 7e-36; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 51598045 - 51597961
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  51598045 aaaggactcaaacggactttttattaattatgggaccaaagcgataccaaaaaataagttaagggacgaaaatagcaattaagcc 51597961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 16962094 - 16962009
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||||||||||| ||||||||||||||||| |||||||||| |||||||||||| ||||||||||  ||||||||||||||||||    
T  16962094 aaaggactcaaacagactttttattaattataggaccaaagcaataccaaaaaattagttaagggacaaaaatagcaattaagcct 16962009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 51599407 - 51599491
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||| |||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  51599407 aaagaactcaaacggactttttattaattataggatcaaagcgataccaaaaaattagttaagggacgaaaatagcaattaagcc 51599491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 16963400 - 16963484
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||||||||||   ||||||||||||||||| ||||||| |||||||||||||| |||||||| | ||||||| ||||||||||    
T  16963400 aaaggactcaaatgaactttttattaattatgagaccaaatcgataccaaaaaattagttaaggaacgaaaataacaattaagcc 16963484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 46015840 - 46015915
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||| |||||||| ||| |||||||||||||||||||||||||||| | ||||||||  |||||| ||||||||||    
T  46015840 aaacggacttttttttagttatgggaccaaagcgataccaaaaaattacttaagggactaaaataacaattaagcc 46015915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 33333395 - 33333467
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaa 82  Q
    |||| ||| |||| |||||||||||||||||  ||||||||||||| ||||||||||  ||||||||||||||    
T  33333395 aaacggacatttttttaattatgggaccaaactgataccaaaaaattagttaagggactaaaatagcaattaa 33333467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 49964139 - 49964207
Alignment:
Q  18 tttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| ||| ||| |||||||||| ||||||||| ||||| |||||||||||||| |||||||||||||    
T  49964139 ttttttttacttaagggaccaaagtgataccaaataataacttaagggatgaaaagagcaattaagcct 49964207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 50682580 - 50682644
Alignment:
Q  20 tttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagc 84  Q
    ||||||| |||||||||||||||||||||||||||  | ||||||||  ||||||||||||||||    
T  50682580 tttattatttatgggaccaaagcgataccaaaaaaataattaagggaccaaaatagcaattaagc 50682644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 6242694 - 6242756
Alignment:
Q  24 ttaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||||| |||||||||||||||| ||  ||| |||||||||||||||||| |||||||||||    
T  6242694 ttaattaagggaccaaagcgatactaattaattagttaagggatgaaaatatcaattaagcct 6242756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 36143125 - 36143195
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||| ||| ||| ||||||||| |||||||||| ||||| |||||||| ||||| ||||||||||||||    
T  36143125 cttttttttacttaagggaccaaatcgataccaaataataacttaagggacgaaaagagcaattaagccta 36143195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 33332252 - 33332163
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaattaca 99  Q
    |||| ||| |||| ||| ||||||||||||| |||||||||| ||  ||||||| ||  ||||||||||||||||||| | |||||||||    
T  33332252 aaacggacatttttttagttatgggaccaaaccgataccaaacaactagttaagagactaaaatagcaattaagcctacttttaattaca 33332163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 46014776 - 46014699
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||| |||||||| ||| |||||||| | ||||||||||||||||| ||||||  ||  |||||||||||||||||||    
T  46014776 aaacagacttttttttagttatgggatcgaagcgataccaaaaaattagttaaatgactaaaatagcaattaagccta 46014699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 47113104 - 47113173
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||||| ||| ||| |||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||||    
T  47113104 cttttttttacttaagggatcaaagcgataccaaataataacttaagggacgaaaagagcaattaagcct 47113173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 32193585 - 32193516
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||||| ||||||| |||||||||||||||||||  ||  ||||||||||| |||| |||| ||||||||    
T  32193585 cttttttttaattaagggaccaaagcgataccaattaaatagttaagggattaaaagagcatttaagcct 32193516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 48225086 - 48225009
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaatt 96  Q
    ||||| || ||| ||||||||| | | |||||||||||||||||||||| |||| || |||||||||| | |||||||    
T  48225086 ttttaatagttaagggaccaaaaccaaaccaaaaaataagttaagggatcaaaaaagtaattaagccttaaattaatt 48225009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 6241314 - 6241250
Alignment:
Q  24 ttaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||| |||||||||||||||| ||| ||  |||||||| | |||||||| ||||||||||||    
T  6241314 ttaattaagggaccaaagcgatactaaataaatagttaaggaacgaaaatagaaattaagcctaa 6241250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 45678440 - 45678368
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaat 89  Q
    |||||| ||| ||| |||||||||||||||||||  ||  ||||||||||| |||| |||| |||||||||||    
T  45678440 cttttttttagttaagggaccaaagcgataccaattaaatagttaagggatcaaaagagcatttaagcctaat 45678368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 3798700 - 3798778
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaat 95  Q
    |||||| ||| ||| |||||||||||||||||||  ||  ||||||||||  |||| |||| |||||||||||| ||||    
T  3798700 cttttttttagttaagggaccaaagcgataccaattaaatagttaagggaccaaaagagcatttaagcctaataataat 3798778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 6714693 - 6714763
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||| ||||||| |||||||||||||||||||  ||  ||||||||||  |||| |||| |||||||||    
T  6714693 cttttttttaattaagggaccaaagcgataccaattaaatagttaagggaccaaaagagcatttaagccta 6714763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 10579667 - 10579733
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||    
T  10579667 ttttaatagttaagggaccaaatcgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 10579733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 11652942 - 11652876
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||    
T  11652942 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 11652876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 7964180 - 7964111
Alignment:
Q  18 tttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||| ||| ||| |||||||||||||||||||| ||  ||||||||||  |||| |||| |||||||||    
T  7964180 ttttttttagttaagggaccaaagcgataccaaataaatagttaagggaccaaaagagcatttaagccta 7964111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 9478607 - 9478676
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||||| ||| ||| |||||||||||||||||||  ||  ||||||||||| |||| |||| ||||||||    
T  9478607 cttttttttagttaagggaccaaagcgataccaattaaatagttaagggatcaaaagagcatttaagcct 9478676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 11653002 - 11652949
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaa 72  Q
    ||||| || ||| ||||||||| ||| ||||||||||||||||||||| |||||    
T  11653002 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggacgaaaa 11652949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 15073483 - 15073414
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||||| ||| ||| |||||||||||||||||||  ||  ||||||||||| |||| |||| ||||||||    
T  15073483 cttttttttagttaagggaccaaagcgataccaattaaatagttaagggatcaaaagagcatttaagcct 15073414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 10719431 - 10719355
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||| ||| |||||||| |||||||||||||||||||| ||| ||  | ||||||||  |||| |||| ||||||||    
T  10719431 aaacggaccttttattatttatgggaccaaagcgatactaaataaatacttaagggaccaaaagagcatttaagcct 10719355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 24326650 - 24326582
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||| ||| ||| |||||||||||||||||||| ||  ||||||||||  |||| |||| |||||||    
T  24326650 cttttttttagttaagggaccaaagcgataccaaataaatagttaagggaccaaaagagcatttaagcc 24326582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 5e-34; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 39270768 - 39270853
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  39270768 aaaggactcaaacggactttttattaattatgggaccaaaacgataccaaaaaataagttaagggacgaaaatagcaattaagcct 39270853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 39567147 - 39567060
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||||   ||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  39567147 aaaggactcaaatgaactttttatcaattatgggaccaaagcgataccaaaaaattagttaagggacgaaaataacaattaagcctaa 39567060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 45378522 - 45378605
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagc 84  Q
    |||||||| ||||  | |||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||    
T  45378522 aaaggactgaaacataatttttattaattatgggaccaaagcgataccaaaaaattatttaagggacgaaaatagcaattaagc 45378605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44633748 - 44633830
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaag 83  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||| |||||||| |  |||||||||||||||    
T  44633748 aaaggactcaaataaactttttattaattatgggaccaaagcgataccaaaaaattagttaaggaaccaaaatagcaattaag 44633830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 9311096 - 9311018
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||| |||||||| ||| |||||||||||||||||||||||||||| || |||||||  ||||||||||||||||||||    
T  9311096 aaacagacttttttttagttatgggaccaaagcgataccaaaaaattagataagggactaaaatagcaattaagcctaa 9311018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 39568482 - 39568564
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaag 83  Q
    |||||||||||||  |||||||||||||||||| |||||| |||||| ||||||| ||||||||||  |||||||||||||||    
T  39568482 aaaggactcaaacaaactttttattaattatggaaccaaaacgatactaaaaaattagttaagggacaaaaatagcaattaag 39568564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 44632790 - 44632704
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||||||||||  | |||||||||||| |||||||||| |||||||||||||| | ||||| || ||||||||||||||| ||||    
T  44632790 aaaggactcaaacgaattttttattaattttgggaccaaaacgataccaaaaaattaattaagagacgaaaatagcaattaaaccta 44632704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 14816625 - 14816570
Alignment:
Q  30 atgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||||||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  14816625 atgggaccaaagcgataccaaaaaattagttaagggactaaaatagcaattaagcc 14816570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 14829115 - 14829170
Alignment:
Q  30 atgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||||||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  14829115 atgggaccaaagcgataccaaaaaattagttaagggactaaaatagcaattaagcc 14829170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 9312159 - 9312236
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||| |||||||| ||| |||||||| ||||||||||||||||||| |||||| |||  |||||||||||||| ||||    
T  9312159 aaacggacttttttttagttatgggatcaaagcgataccaaaaaattagttaaaggactaaaatagcaattaaaccta 9312236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 22191884 - 22191958
Alignment:
Q  5 gactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaatt 80  Q
    ||||||||| |||||||||||| ||| |||||||||||||||| ||||||| | |||||||| ||||||| |||||    
T  22191884 gactcaaacagactttttattacttacgggaccaaagcgatactaaaaaat-acttaagggacgaaaataacaatt 22191958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 13463153 - 13463206
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||||||||||||||||| ||||| |||||||| ||||| ||||||||||||    
T  13463153 gggaccaaagcgataccaaataataacttaagggacgaaaagagcaattaagcc 13463206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 21015218 - 21015265
Alignment:
Q  4 ggactcaaactgactttttattaattatgggaccaaagcgataccaaa 51  Q
    |||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  21015218 ggacccaaacagactttttattacttatgggaccaaagcgataccaaa 21015265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 45377478 - 45377427
Alignment:
Q  34 gaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||||||||||||||||||| | |||||||| ||||||| ||||||||||    
T  45377478 gaccaaagcgataccaaaaaatcaattaagggacgaaaataacaattaagcc 45377427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 4325966 - 4326035
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||||    
T  4325966 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcctaa 4326035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 10134683 - 10134606
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||| ||| |||||||| |||||||||||||||||||||||| ||  | ||||||||  |||| |||| |||||||||    
T  10134683 aaacggaccttttattacttatgggaccaaagcgataccaaataaatacttaagggacaaaaagagcatttaagccta 10134606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 29802226 - 29802157
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||||    
T  29802226 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcctaa 29802157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 29802576 - 29802632
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||||    
T  29802576 gggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcctaa 29802632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 5876828 - 5876895
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||    
T  5876828 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 5876895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 12850030 - 12849959
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaata 90  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||| |||||||||    
T  12850030 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaatttagcctaata 12849959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 21524649 - 21524716
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||    
T  21524649 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 21524716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 45467503 - 45467436
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||    
T  45467503 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 45467436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 5822030 - 5822084
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||    
T  5822030 gggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 5822084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 12823319 - 12823265
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||    
T  12823319 gggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 12823265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 35103592 - 35103658
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| || ||| ||||||||| ||| || ||||||||||||||||||| |||| || |||||||||    
T  35103592 ttttaatagttaagggaccaaaacgaaactaaaaaataagttaagggatcaaaagagtaattaagcc 35103658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 36194702 - 36194620
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatatt 92  Q
    |||| |||||||||||| ||||||||||||| ||||||   |||  |||||||||||  |||| |||| ||||||||| ||||    
T  36194702 aaacagactttttattacttatgggaccaaaacgatacttgaaatcaagttaagggactaaaagagcatttaagcctattatt 36194620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 43633191 - 43633121
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||| ||||||| |||||||||||||||||||  ||  ||||||||||  |||| |||| |||||||||    
T  43633191 cttttttttaattaagggaccaaagcgataccaattaaatagttaagggaccaaaaaagcatttaagccta 43633121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 14819391 - 14819432
Alignment:
Q  48 caaaaaataagttaagggatgaaaatagcaattaagcctaat 89  Q
    |||||||| ||||||||||  |||||||||||||||||||||    
T  14819391 caaaaaattagttaagggactaaaatagcaattaagcctaat 14819432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 3318030 - 3318098
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||| || ||| ||||||||| ||| |||||||||||| ||||||||  |||| || |||||||||||    
T  3318030 ttttaatagttaagggaccaaaacgaaaccaaaaaataaattaagggaccaaaagagtaattaagccta 3318098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 6513234 - 6513167
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||| || ||| ||||||||| ||| ||||||||||||||||| |||| |||| || |||||||||||    
T  6513234 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaa-ggatcaaaagagtaattaagccta 6513167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 31933568 - 31933640
Alignment:
Q  15 gactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||||||||| ||||||||||||| ||||||   |||  |||||||||||  |||| |||| |||||||||    
T  31933568 gactttttattacttatgggaccaaaccgatacttgaaatcaagttaagggaccaaaagagcatttaagccta 31933640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 41387560 - 41387612
Alignment:
Q  35 accaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||| ||| |||||||||||||||||||||  |||| || |||||||||||    
T  41387560 accaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 41387612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 26024971 - 26024888
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagc 84  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  26024971 aaaggactcaaacagactttttattaattatgggaccaaagcgataccaaaaaataagttaagggacgaagatagcaattaagc 26024888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21709242 - 21709155
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||    
T  21709242 aaaggacttaaacggactttttattaattatgggaccaaagcgatactaaaaaattagttaagggacgaaaatagcaattaagcctaa 21709155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21710575 - 21710662
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||    
T  21710575 aaaggactcaaacggactttttattaattatgggaccaaagcgataccaaaaaataagttaagggacaaaaatatcaattcagcctaa 21710662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 26025840 - 26025924
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||||||||| | ||||||||||||||||||| | |||||| ||||||| |||| |||||| |||  |||||||||||||||||    
T  26025840 aaaggactcaagcggactttttattaattatggaatcaaagcaataccaagaaattagttaaaggacaaaaatagcaattaagcc 26025924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 45088235 - 45088322
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaatta 97  Q
    |||| ||| |||| ||| |||||||||||||  ||||||||| ||| ||||||||||  ||||||||||||||||| ||| |||||||    
T  45088235 aaacggacctttttttagttatgggaccaaactgataccaaacaattagttaagggactaaaatagcaattaagccaaattttaatta 45088322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10990572 - 10990654
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaag 83  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||| ||||||  |  |||| || |||||||| |||||||    
T  10990572 aaaggactcaaacagactttttattacttatgggatcaaagcgatactaaaaaaatacataagagacgaaaatagtaattaag 10990654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 17279449 - 17279503
Alignment:
Q  33 ggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||| ||||    
T  17279449 ggaccaaagcgataccaaataataacttaagggatgaaaagagcaattaaaccta 17279503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 30766674 - 30766743
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||||| ||| ||| |||||||||| ||||||||| ||||| |||||||| ||||| |||||||||||||    
T  30766674 cttttttttacttaagggaccaaagtgataccaaataataacttaagggacgaaaaaagcaattaagcct 30766743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 39383871 - 39383805
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| |||||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||    
T  39383871 ttttaataattaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 39383805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 45596945 - 45596867
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaa-taagttaagggatgaaaatagcaattaagccta 87  Q
    |||| |||||||| ||| |||||  | |||| ||||||||||||| | ||||||||||| |||||||||||||||||||    
T  45596945 aaacggacttttttttagttatgttatcaaaccgataccaaaaaaattagttaagggattaaaatagcaattaagccta 45596867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 10986764 - 10986695
Alignment:
Q  16 actttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||||||| |||||| ||| |||| |||||||||||||  |||||||||| ||||| || |||||||||    
T  10986764 actttttatcaattataggagcaaaacgataccaaaaaaatagttaagggacgaaaagagaaattaagcc 10986695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 40738254 - 40738193
Alignment:
Q  24 ttaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||||| |||||||||||||||| ||  ||| |||| ||||| ||||||||||||||||||    
T  40738254 ttaattaagggaccaaagcgatactaattaattagttgagggacgaaaatagcaattaagcc 40738193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 45087140 - 45087067
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaag 83  Q
    |||| ||| |||| ||| ||||||||||||| |||||||||||||| |||||| |||  |||||| ||||||||    
T  45087140 aaacggacctttttttagttatgggaccaaaccgataccaaaaaattagttaaaggactaaaataacaattaag 45087067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 8736116 - 8736192
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaat 95  Q
    ||||| || ||| ||||||||| ||| |||||||||||| ||||||||  |||| || |||||||||||||| ||||    
T  8736116 ttttaatagttaagggaccaaaacgacaccaaaaaataaattaagggaccaaaagagtaattaagcctaataataat 8736192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 43705012 - 43704940
Alignment:
Q  18 tttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaata 90  Q
    ||||| ||||||| |||||||||||||||||||  ||  ||||||||||  |||| |||| ||||||||||||    
T  43705012 ttttttttaattaagggaccaaagcgataccaattaaatagttaagggaccaaaaaagcatttaagcctaata 43704940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 19543551 - 19543492
Alignment:
Q  24 ttaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaag 83  Q
    ||||||| |||| ||||||||||| ||| ||  |||||||||| ||||||||||||||||    
T  19543551 ttaattaagggatcaaagcgatactaaataaatagttaagggacgaaaatagcaattaag 19543492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 24485821 - 24485868
Alignment:
Q  4 ggactcaaactgactttttattaattatgggaccaaagcgataccaaa 51  Q
    ||||| |||| |||||||||||| ||||||||||||| ||||||||||    
T  24485821 ggacttaaacggactttttattacttatgggaccaaaacgataccaaa 24485868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 36701424 - 36701357
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||    
T  36701424 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 36701357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 39384166 - 39384213
Alignment:
Q  35 accaaagcgataccaaaaaataagttaagggatgaaaatagcaattaa 82  Q
    |||||| ||| |||||||||||||||||||||| ||||||| ||||||    
T  39384166 accaaaacgaaaccaaaaaataagttaagggatcaaaatagtaattaa 39384213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 8463115 - 8463185
Alignment:
Q  18 tttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||| ||| |||| |||||||||| |||| ||  | ||||| ||||||||||||| ||||||||||    
T  8463115 tttttattatttaagggatcaaagcgatatcaaataaatacttaagagatgaaaatagcatttaagcctaa 8463185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 3217744 - 3217821
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaa 94  Q
    |||||| ||| ||| |||||||||||||||||||  ||  ||||||||||  |||| |||| |||||||||| |||||    
T  3217744 cttttttttagttaagggaccaaagcgataccaattaaatagttaagggaccaaaagagcatttaagcctaaaattaa 3217821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 26777823 - 26777864
Alignment:
Q  25 taattatgggaccaaagcgataccaaaaaataagttaaggga 66  Q
    ||||||||||||||||| || |||| ||||||||||||||||    
T  26777823 taattatgggaccaaagtgaaaccataaaataagttaaggga 26777864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 45057607 - 45057538
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||| || ||| |||| |||| ||| |||||||||||||||||||||  |||| || ||||||||||||    
T  45057607 ttttaatagttaagggatcaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcctaa 45057538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 45457094 - 45457163
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||||| ||||||| |||||||||||||||||||  ||  ||||||||||  |||| |||| ||||||||    
T  45457094 cttttttttaattaagggaccaaagcgataccaattaaatagttaagggaccaaaagagcatttaagcct 45457163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 38030397 - 38030332
Alignment:
Q  15 gactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaa 82  Q
    |||||||||||| |||||||| ||||||||||| |||||  ||  ||||||| |||||||| ||||||    
T  38030397 gactttttattacttatgggatcaaagcgatactaaaaa--aacgtaagggacgaaaatagaaattaa 38030332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 47987395 - 47987315
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaatta 97  Q
    |||||| ||| ||| |||||||||||||||||||  ||  ||||||||||  |||| |||| |||||||||| || |||||    
T  47987395 cttttttttagttaagggaccaaagcgataccaattaaatagttaagggaccaaaagagcatttaagcctaagataaatta 47987315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 129393 - 129478
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||    
T  129393 aaaggactcaaacggactttttattaattatgggaccaaagtgataccaaaaaataagttaagggacgaaaataacaattaagcct 129478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 123508 - 123421
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||||||| |||| |||||||||| |||||||||||||||||||||    
T  123508 aaaggactcaagcggactttttattaattatgggaccaaagcaataccaagaaattagttaagggacgaaaatagcaattaagcctaa 123421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 134384 - 134297
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||||||| |||| |||||||||| |||||||||||||||||||||    
T  134384 aaaggactcaagcggactttttattaattatgggaccaaagcaataccaagaaattagttaagggacgaaaatagcaattaagcctaa 134297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21611999 - 21611913
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||| |||||||| || ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||    
T  21611999 aaagaactcaaacggattttttattaattatgggaccaaatcgataccaaaaaattagttaagggacgaaaatagcaattaagccta 21611913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 21282897 - 21282816
Alignment:
Q  5 gactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||||||||||||||||    
T  21282897 gactcaaacagactttttattaattatgggaccaaagcgatacaaaaaaattaattaagggacgaaaatagcaattaagcct 21282816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 5659189 - 5659106
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatg-aaaatagcaattaag 83  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||||    
T  5659189 aaaggactcaaacagactttttattaattatgggaccaaagtgataccaaaaaattagttaagggacgaaaaatagcaattaag 5659106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21612855 - 21612933
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaat 79  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| | |||||||| ||||||| ||||    
T  21612855 aaaggactcaaacagactttttattaattatgggaccaaaacgataccaaaaaattaattaagggacgaaaataacaat 21612933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 5660166 - 5660254
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaata 90  Q
    |||||| |||||| ||||||| |||||||||| ||||||| |||||||||||||| |||| ||||| |||||||||||||||||| ||||    
T  5660166 aaaggattcaaacggactttt-attaattatgagaccaaaacgataccaaaaaattagtttagggacgaaaatagcaattaagccaaata 5660254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 29744856 - 29744772
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaa 94  Q
    |||| |||||||| ||| ||||||||||||| |||||||||| ||| ||||||||||  ||||||||||||||||| ||| ||||    
T  29744856 aaacggacttttttttagttatgggaccaaaccgataccaaataattagttaagggactaaaatagcaattaagccaaattttaa 29744772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 29751123 - 29751199
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||| |||||||| ||| ||||||||||||| |||||||||| ||| ||||||||||  ||||||||||||||||||    
T  29751123 aaacggacttttttttagttatgggaccaaaccgataccaaataattagttaagggactaaaatagcaattaagcct 29751199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 12260514 - 12260444
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||    
T  12260514 cttttttttacttaagggaccaaagcgataccaaataataacttaagggacgaaaagagcaattaagccta 12260444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 20489415 - 20489498
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||||||||||  ||||||||||| ||||||||||||||| |||| |||||| ||  |||||||  |||||||||||||||||    
T  20489415 aaaggactcaaacatactttttattacttatgggaccaaagcaatactaaaaaa-aacataagggactaaaatagcaattaagcc 20489498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 14403745 - 14403685
Alignment:
Q  28 ttatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||||||||||||| |||||||| |||| || |||||||  ||||||||||||||||||||    
T  14403745 ttatgggaccaaagtgataccaacaaattaggtaagggactaaaatagcaattaagcctaa 14403685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 20745653 - 20745582
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||||| ||| ||| |||| ||||||||||||||| ||||| |||||||| ||||| || ||||||||||||    
T  20745653 cttttttttacttaagggatcaaagcgataccaaataataacttaagggacgaaaagagtaattaagcctaa 20745582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 5645612 - 5645546
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| |||||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||    
T  5645612 ttttaataattaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 5645546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 8938952 - 8938884
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||||    
T  8938952 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 8938884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 6888849 - 6888775
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatatta 93  Q
    ||||| || ||| ||||||||| ||| |||||||||||| ||||||||  |||| || |||||||||||| ||||    
T  6888849 ttttaatagttaagggaccaaaacgaaaccaaaaaataaattaagggaccaaaagagtaattaagcctaacatta 6888775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 26841598 - 26841664
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||    
T  26841598 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggacaaaaagagtaattaagcc 26841664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 29465816 - 29465754
Alignment:
Q  24 ttaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||||| ||| |||||| ||||| ||  ||| |||||||||| |||||||||||||||||||    
T  29465816 ttaattaaggggccaaagtgatactaattaattagttaagggacgaaaatagcaattaagcct 29465754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 31038374 - 31038312
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaa 94  Q
    ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||| || |||||    
T  31038374 gggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccaaaaattaa 31038312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 18700454 - 18700401
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||    
T  18700454 gggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 18700401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 21283922 - 21283963
Alignment:
Q  46 accaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||||||| |||||||||| ||||||| ||||||||||||    
T  21283922 accaaaaaattagttaagggacgaaaataacaattaagccta 21283963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 29467282 - 29467343
Alignment:
Q  24 ttaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||||  |||||||||| |||| ||| ||  |||||||||| ||||||||||||||||||    
T  29467282 ttaattaaaggaccaaagcaatactaaataaatagttaagggacgaaaatagcaattaagcc 29467343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 8286377 - 8286309
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||| ||  |||| || |||||||||||    
T  8286377 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagagaccaaaagagtaattaagccta 8286309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 8286682 - 8286750
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||| || ||| ||||||||| ||| ||||||||||||||||||||   |||| || |||||||||||    
T  8286682 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggcccaaaaaagtaattaagccta 8286750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 8939275 - 8939327
Alignment:
Q  35 accaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||| ||| ||||||||||||||||| |||| |||| || |||||||||||    
T  8939275 accaaaacgaaaccaaaaaataagttaaaggatcaaaagagaaattaagccta 8939327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 29836366 - 29836434
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||| |||||| |||| ||||  || |||||||||||||||| ||||  ||||||| |||||||||||    
T  29836366 ttttaataattaagggatcaaaatgaaaccaaaaaataagttaggggaccaaaatagtaattaagccta 29836434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 30860186 - 30860226
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaa 72  Q
    ||||||||| ||| |||||||||||||||||||||| ||||    
T  30860186 gggaccaaaacgaaaccaaaaaataagttaagggatcaaaa 30860226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 36888422 - 36888337
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| || |||||||  ||||||||||||||||||    
T  36888422 aaaggactcaaacagactttttattagttatgggaccaaaccgataccaaaaaattagctaagggactaaaatagcaattaagcct 36888337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36889721 - 36889806
Alignment:
Q  1 aaaggactcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||||| |||||  |||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||    
T  36889721 aaaggattcaaatagactttttattaattatgggaccaaaccgataccaaaaaattagttaagggactaaaatagcaattaagcct 36889806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 34166913 - 34166840
Alignment:
Q  16 actttttattaattatgggaccaaagcgataccaaaaaata-agttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||||||||||||| |||  |||||||||||| | | |||||||| |||||||||||||||||||||    
T  34166913 actttttattaattatgggacaaaactgataccaaaaaaaatatttaagggacgaaaatagcaattaagcctaa 34166840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 7184949 - 7184878
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||||| ||| |||||||| |||| |||||||||||||| ||||||| ||  ||||||||||||||||||||    
T  7184949 cttttttttagttatgggatcaaaccgataccaaaaaattagttaagagactaaaatagcaattaagcctaa 7184878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 35738419 - 35738360
Alignment:
Q  29 tatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||| ||||||||||||||||||||| |||||||| | |||||||| ||||||||||||    
T  35738419 tatggaaccaaagcgataccaaaaaattagttaaggaacgaaaatagtaattaagcctaa 35738360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 19297595 - 19297526
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||||| ||| ||| ||||||||| |||||||||| ||||| |||||||| ||||| |||||||||||||    
T  19297595 cttttttttacttaagggaccaaaacgataccaaataataacttaagggacgaaaagagcaattaagcct 19297526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 20686669 - 20686738
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||| ||| ||| ||||||||||| |||||||| ||||| |||||||| ||||| |||||||||||||||    
T  20686669 tttttttacttaagggaccaaagcaataccaaataataacttaagggacgaaaaaagcaattaagcctaa 20686738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 38578174 - 38578243
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||| |||||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||||    
T  38578174 ttttaataattaagggaccaaaacgacaccaaaaaataagttaagggaccaaaagagtaattaagcctaa 38578243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 40468114 - 40468049
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaa 82  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| |||||||| ||||| |||||||||    
T  40468114 cttttttttacttaagggaccaaagcgataccaaataataacttaagggacgaaaagagcaattaa 40468049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 15130046 - 15130114
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||| |||| || |||||||||||    
T  15130046 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggatcaaaagagtaattaagccta 15130114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 13809499 - 13809426
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagc 84  Q
    |||| |||||||| |||||||| ||| ||||||||||||||||||| |||||||||   ||||||| ||||||||    
T  13809499 aaacggacttttt-ttaattataggatcaaagcgataccaaaaaattagttaagggcctaaaatagaaattaagc 13809426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 7031871 - 7031802
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||||    
T  7031871 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcctaa 7031802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 8029019 - 8028966
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||||||||||||||||| ||||| ||||| || | ||||||||||||||||    
T  8029019 gggaccaaagcgataccaaataataacttaagagacggaaatagcaattaagcc 8028966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 13810568 - 13810638
Alignment:
Q  15 gactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||||| ||| |||||||||||||||||||||  ||||| ||||||| ||  ||||| |||||||||||||    
T  13810568 gacttttttttagttatgggaccaaagcgatacc--aaaattagttaagagactaaaattgcaattaagccta 13810638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 28190479 - 28190548
Alignment:
Q  18 tttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||| ||| ||| |||||||||  ||||||||| ||||| |||||||| ||||| ||||||||||||||    
T  28190479 ttttttttacttaagggaccaaaatgataccaaataataacttaagggacgaaaaaagcaattaagccta 28190548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 7182416 - 7182340
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaat 95  Q
    ||||| |||||| ||||||||| ||| ||||||||||||||||| |||  |||  || ||||||||||||| |||||    
T  7182416 ttttaataattaagggaccaaaacgaaaccaaaaaataagttaatggaccaaatgagtaattaagcctaattttaat 7182340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 27516225 - 27516157
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||||    
T  27516225 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 27516157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 18905002 - 18905069
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| |||||| |||| |||| ||| |||||||||||||||||||||  |||| || ||||||||||    
T  18905002 ttttaataattaagggatcaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 18905069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 26424814 - 26424885
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||||| ||||||| |||||||||||||||||||  ||  ||||||||||  |||| |||| ||||||||||    
T  26424814 cttttttttaattaagggaccaaagcgataccaattaaatagttaagggaccaaaagagcatttaagcctaa 26424885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 26892530 - 26892463
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| || ||| |||| |||| ||| |||||||||||||||||||||  |||| |||||||||||||    
T  26892530 ttttaatagttaagggatcaaaacgaaaccaaaaaataagttaagggaccaaaagagcaattaagcct 26892463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 26897969 - 26897902
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| || ||| |||| |||| ||| |||||||||||||||||||||  |||| |||||||||||||    
T  26897969 ttttaatagttaagggatcaaaacgaaaccaaaaaataagttaagggaccaaaagagcaattaagcct 26897902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 4602807 - 4602885
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaat 95  Q
    |||||| ||| ||| |||||||||||||||||||  ||  ||||||||||  |||| |||| |||||||||||| ||||    
T  4602807 cttttttttagttaagggaccaaagcgataccaattaaatagttaagggaccaaaagagcatttaagcctaatagtaat 4602885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 18904665 - 18904595
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaat 89  Q
    ||||| || ||| ||||||||| ||| || ||||||||||||||||||  |||| || |||||||||||||    
T  18904665 ttttaatagttaagggaccaaaacgaaacaaaaaaataagttaagggaccaaaagagtaattaagcctaat 18904595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 20899607 - 20899545
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaa 72  Q
    |||| |||||||||||| ||| |||||||||  ||||| |||||| |||||||||||| ||||    
T  20899607 aaacagactttttattacttaagggaccaaactgatactaaaaaacaagttaagggatcaaaa 20899545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 3603557 - 3603504
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||||||||||||| ||| ||  |||||||||| ||||||| ||||||||||    
T  3603557 gggaccaaagcgatactaaataaatagttaagggacgaaaataacaattaagcc 3603504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 6645879 - 6645940
Alignment:
Q  35 accaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaatt 96  Q
    |||||| ||| |||||||||||||||||||||| ||||  | ||||||||| ||| ||||||    
T  6645879 accaaaacgaaaccaaaaaataagttaagggatcaaaagtgtaattaagccaaattttaatt 6645940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 31309775 - 31309828
Alignment:
Q  35 accaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||||| ||| |||||||||||||||||||||  |||| || ||||||||||||    
T  31309775 accaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcctaa 31309828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 36099359 - 36099290
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||  || ||||||||||||    
T  36099359 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaatgagtaattaagcctaa 36099290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 7032148 - 7032216
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    ||||| || ||| ||||||||| ||| || ||||||||||||||||||  |||| || |||||||||||    
T  7032148 ttttaatagttaagggaccaaaacgaaactaaaaaataagttaagggaccaaaagagtaattaagccta 7032216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 10414047 - 10413995
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagc 84  Q
    ||||||||| ||| |||||||||||| ||||||||  ||||||| ||||||||    
T  10414047 gggaccaaaacgaaaccaaaaaataaattaagggaccaaaatagtaattaagc 10413995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 27516549 - 27516601
Alignment:
Q  35 accaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||| ||| |||||||||||||||||||||  |||| || |||||||||||    
T  27516549 accaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 27516601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 14346 - 14264
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaa-taagttaagggatgaaaatagcaattaagcctaatat 91  Q
    |||| |||||||| ||| ||||||||||||| ||||||||||||| | ||||||||||  |||||||||||||||||||||||    
T  14346 aaacggacttttttttagttatgggaccaaaccgataccaaaaaaattagttaagggactaaaatagcaattaagcctaatat 14264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 71821 - 71887
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  71821 tttttttagttatgggaccaaagcgataccaaaaaattagttaagggactaaaatagcaattaagcc 71887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 70736 - 70668
Alignment:
Q  18 tttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| ||| ||||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||    
T  70736 ttttttttagttatgggaccaaaccgataccaaaaaattagttaagggactaaaatagcaattaagcct 70668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 19718881 - 19718951
Alignment:
Q  18 tttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||| ||| |||| ||| ||||||||||||||||||| |||||| |||  ||||||||||||||||||||    
T  19718881 ttttttttagttataggatcaaagcgataccaaaaaattagttaaaggactaaaatagcaattaagcctaa 19718951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 37812297 - 37812222
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaatattaa 94  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||||| |||||    
T  37812297 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcctaaaattaa 37812222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 38384936 - 38384865
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||||| ||||||| |||||||||||||||||||| ||  ||||||||||| ||||  ||| ||||||||||    
T  38384936 cttttttttaattaagggaccaaagcgataccaaataaatagttaagggatcaaaaacgcatttaagcctaa 38384865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 8127538 - 8127472
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| |||||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||    
T  8127538 ttttaataattaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 8127472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 42026655 - 42026725
Alignment:
Q  18 tttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||||    
T  42026655 tttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcctaa 42026725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 6793835 - 6793766
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||||| ||| ||| |||||||||| ||||||||| ||||| ||||||||  |||| |||||||||||||    
T  6793835 cttttttttacttaagggaccaaagtgataccaaataataacttaagggacaaaaagagcaattaagcct 6793766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 14858567 - 14858636
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||| |||||| ||||||||| ||| | |||||||||||||||||||  |||| || ||||||||||||    
T  14858567 ttttaataattaagggaccaaaacgaaatcaaaaaataagttaagggaccaaaagagtaattaagcctaa 14858636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 22803582 - 22803651
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||||    
T  22803582 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcctaa 22803651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 35463855 - 35463896
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaa 51  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  35463855 aaacagactttttattacttatgggaccaaagcgataccaaa 35463896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 1156030 - 1155963
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||    
T  1156030 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 1155963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 4349562 - 4349495
Alignment:
Q  18 tttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    |||||| || |||||||| |||| ||| |||||||||||||||||||||  |||| || |||||||||    
T  4349562 tttttaatagttatgggatcaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 4349495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 36442533 - 36442600
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| |||||| || |||||| ||| || ||||||||||||||||||| |||| || ||||||||||    
T  36442533 ttttaataattaaggaaccaaaacgaaacaaaaaaataagttaagggatcaaaagagtaattaagcct 36442600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 4349867 - 4349933
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||    
T  4349867 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 4349933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 6172333 - 6172399
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||    
T  6172333 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 6172399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 9040809 - 9040743
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||    
T  9040809 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 9040743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 9438303 - 9438237
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||    
T  9438303 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 9438237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 10570085 - 10570031
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||||||| ||| |||||||||||||||||||||| |||| |  ||||||||||    
T  10570085 gggaccaaaacgaaaccaaaaaataagttaagggatcaaaagaataattaagcct 10570031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 16792021 - 16791967
Alignment:
Q  35 accaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaat 89  Q
    |||||| ||| |||||||||||||||||||||  |||| || |||||||||||||    
T  16792021 accaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcctaat 16791967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 42382165 - 42382231
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||    
T  42382165 ttttaatagttaagggaccaaatcgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 42382231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 14662662 - 14662695
Alignment:
Q  18 tttttattaattatgggaccaaagcgataccaaa 51  Q
    ||||||||| ||||||||||||||||||||||||    
T  14662662 tttttattacttatgggaccaaagcgataccaaa 14662695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 18508814 - 18508855
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaa 51  Q
    |||| |||||||||||| ||||||||||||| ||||||||||    
T  18508814 aaacagactttttattatttatgggaccaaatcgataccaaa 18508855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 21289538 - 21289591
Alignment:
Q  35 accaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||||| ||| |||||||||||||||||||||  |||| || ||||||||||||    
T  21289538 accaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcctaa 21289591  T

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Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 25333178 - 25333247
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||||| |||||||  ||||||||||||||||||  ||  ||||||||||  ||||||||| ||||||||    
T  25333178 cttttttttaattaaaggaccaaagcgataccaattaaatagttaagggaccaaaatagcatttaagcct 25333247  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 31369932 - 31369985
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||||||| ||| |||||||||||||||||||||  |||| || |||||||||    
T  31369932 gggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcc 31369985  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 42026333 - 42026272
Alignment:
Q  35 accaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta-atattaat 95  Q
    |||||| ||| |||||||||||||||||||||  |||| || ||||||||||| ||||||||    
T  42026333 accaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcctatatattaat 42026272  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 4959627 - 4959559
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||| ||| ||| |||||||||||||||||||  ||  ||||||||||  ||||||||| |||||||||    
T  4959627 tttttttagttaagggaccaaagcgataccaattaaatagttaagggaccaaaatagcatttaagccta 4959559  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 37812543 - 37812607
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaag 83  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || |||||||    
T  37812543 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaaaagtaattaag 37812607  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 37966875 - 37966811
Alignment:
Q  24 ttaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||||||||||  |||| ||  ||  |||||||||| ||||||| |||||||||||||    
T  37966875 ttaattatgggaccaaagtaatactaattaaatagttaagggacgaaaataacaattaagcctaa 37966811  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 43476446 - 43476498
Alignment:
Q  35 accaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||| ||| |||||||||||||||||||||  |||| || |||||||||||    
T  43476446 accaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagccta 43476498  T

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Target: scaffold0220 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 26032 - 25963
Alignment:
Q  16 actttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcc 85  Q
    ||||||||||| |||||||||||||||||||||||| ||  | ||||||||  |||| |||| |||||||    
T  26032 actttttattacttatgggaccaaagcgataccaaataaatacttaagggaccaaaagagcatttaagcc 25963  T

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Target: scaffold0135 (Bit Score: 33; Significance: 0.000000001; HSPs: 7)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 5862 - 5918
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||||| |||||||||||||||| ||||  |||| || ||||||||||||    
T  5862 gggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagcctaa 5918  T

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Target: scaffold0135; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 10077 - 10133
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||||| |||||||||||||||| ||||  |||| || ||||||||||||    
T  10077 gggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagcctaa 10133  T

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Target: scaffold0135; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 14292 - 14348
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||||| |||||||||||||||| ||||  |||| || ||||||||||||    
T  14292 gggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagcctaa 14348  T

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Target: scaffold0135; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 18507 - 18563
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||||| |||||||||||||||| ||||  |||| || ||||||||||||    
T  18507 gggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagcctaa 18563  T

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Target: scaffold0135; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 22722 - 22778
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||||| |||||||||||||||| ||||  |||| || ||||||||||||    
T  22722 gggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagcctaa 22778  T

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Target: scaffold0135; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 26937 - 26993
Alignment:
Q  32 gggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||||| |||||||||||||||| ||||  |||| || ||||||||||||    
T  26937 gggaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagcctaa 26993  T

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Target: scaffold0135; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 1649 - 1703
Alignment:
Q  34 gaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    ||||||||||| |||||||||||||||| ||||  |||| || ||||||||||||    
T  1649 gaccaaagcgaaaccaaaaaataagttaggggaccaaaagagtaattaagcctaa 1703  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 99649 - 99597
Alignment:
Q  35 accaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||| ||| |||||||||||||||||||||| |||| || |||||||||||    
T  99649 accaaaacgaaaccaaaaaataagttaagggatcaaaagagtaattaagccta 99597  T

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Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 99988 - 100041
Alignment:
Q  35 accaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||||| ||| |||||||||||||||||||||  |||| || ||||||||||||    
T  99988 accaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcctaa 100041  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 429049 - 428989
Alignment:
Q  6 actcaaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaaggga 66  Q
    |||||||| | |||||| ||| ||| |||||||||||||||||||| ||||| ||||||||    
T  429049 actcaaacggtcttttttttatttaagggaccaaagcgataccaaataataacttaaggga 428989  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 429159 - 429208
Alignment:
Q  38 aaagcgataccaaaaaataagttaagggatgaaaatagcaattaagccta 87  Q
    |||||||||||||| ||||| ||||||||  |||| ||||||||||||||    
T  429159 aaagcgataccaaataataacttaagggaccaaaaaagcaattaagccta 429208  T

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Target: scaffold0295 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 8208 - 8275
Alignment:
Q  19 ttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    ||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||||||    
T  8208 ttttaatagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagcct 8275  T

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Target: scaffold0017 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 172902 - 172972
Alignment:
Q  18 tttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcctaa 88  Q
    |||||| || ||| ||||||||| ||| |||||||||||||||||||||  |||| || ||||||| ||||    
T  172902 tttttagtagttaagggaccaaaacgaaaccaaaaaataagttaagggaccaaaagagtaattaagtctaa 172972  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 83376 - 83445
Alignment:
Q  17 ctttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||||| ||| ||| |||||||||||||||||||  ||  ||||||||||  ||||||||| ||||||||    
T  83376 cttttttttagttaagggaccaaagcgataccaattaaatagttaagggaccaaaatagcatttaagcct 83445  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 19229 - 19304
Alignment:
Q  10 aaactgactttttattaattatgggaccaaagcgataccaaaaaataagttaagggatgaaaatagcaattaagcct 86  Q
    |||| |||||||| ||| ||||||||||||| ||||| |||||||| |||||||| |  ||| || |||||||||||    
T  19229 aaacggacttttt-ttagttatgggaccaaaccgatatcaaaaaattagttaaggaactaaagtaacaattaagcct 19304  T

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