View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20141_high_18 (Length: 206)
Name: NF20141_high_18
Description: NF20141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20141_high_18 |
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Alignment Details
Target: chr3 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 51461483 - 51461317
Alignment:
| Q |
16 |
aatatcaaacaacatagtgaaaagtgattaataatccagcattttatgcagacagttaaagaagaaaaacaatgatttatatattaatcatatatgtacc |
115 |
Q |
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| T |
51461483 |
aatatcaaacaacatagtgaaaagtgattaataatccaacattttatgcagacagttaaagaagaaaaacaatgatttatatattaatcatatatgtacc |
51461384 |
T |
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| Q |
116 |
cttgaaataagttaatgcgagcaactgaaacatcaaagagaattagagcatcatgtacacttaaaacg |
183 |
Q |
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| T |
51461383 |
cttg-attaagttaatgtgagcaactgaaacatcaaagagaatcaaagcatcatgtacacttaaaacg |
51461317 |
T |
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