View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20141_high_19 (Length: 205)
Name: NF20141_high_19
Description: NF20141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20141_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 21775226 - 21775402
Alignment:
| Q |
16 |
atgaatgaatgcaaggtttatttattctattctttccgtcatcctattgaattatgattgagatatgttgaaatcatgttttgtgac----tgtc--tgt |
109 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |
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| T |
21775226 |
atgaatgaatacaaggtttatttattctattctttccgtcatcctattgaattatgattgagatatgttgaaatcatgttttgtgactatgtgtcagtgt |
21775325 |
T |
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| Q |
110 |
cacttgaccttatttttcaattttctgtgtaagattattaatccattcatttgggaactttttaggtagggttcatc |
186 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |
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| T |
21775326 |
cacttgaccttatttttcaattttctgtgtaagattattaatccattcgttggggaactttttaggtagggttcatc |
21775402 |
T |
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