View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20141_low_16 (Length: 249)
Name: NF20141_low_16
Description: NF20141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20141_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 32304939 - 32305048
Alignment:
| Q |
126 |
tctctcatcaaacacacgtttaaagacaaattttattttagggatggagtgagtacaaaataacaaaagtaaaagcataatattgacaagtttcccacta |
225 |
Q |
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| T |
32304939 |
tctctcatcaaacacacgtttaaagacaaattttattttagggatggagtgagtacaaaataacaaaagtaaaagcataatattgacaagtttcccacta |
32305038 |
T |
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| Q |
226 |
agagaataat |
235 |
Q |
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| T |
32305039 |
agagaataat |
32305048 |
T |
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Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 32304832 - 32304870
Alignment:
| Q |
19 |
gaaatttctaaatttaactttgataaaatctcttccttt |
57 |
Q |
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| T |
32304832 |
gaaatttctaaatttaactttgataaaatctcttccttt |
32304870 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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