View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20142_high_5 (Length: 283)
Name: NF20142_high_5
Description: NF20142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20142_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 39645667 - 39645931
Alignment:
| Q |
1 |
aaaacaaaggatattgtcaatttcagaccgtcccttcttacaacatgcatcctggaaggaatttaaaggtatataattgaattttactacttccaaattt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39645667 |
aaaacaaaggatattgtcaatttcagaccgtcccttcttacaacatgcatcctggaaggaatttaaaggtatataattgaattttactacttccaaattt |
39645766 |
T |
|
| Q |
101 |
aatatattcgtaaaatgtacatgtattagtctaaatttaagtccagagtaatacaacataatttcctatgttatttttcaccccatttgcactcaagcta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39645767 |
aatatattcgtaaaatgtacatgtattagtctaaatttaagtccagagtaatacatcataatttcctatgttatttttcaccccatttgcactcaagcta |
39645866 |
T |
|
| Q |
201 |
gttccataacataacactctttgtaggacactataactatagagcagaattttttgtgtgggttc |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39645867 |
gttccataacataacactctttgtaggacactataactatagagcagaattttttgtgtgggttc |
39645931 |
T |
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