View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20142_low_1 (Length: 531)

Name: NF20142_low_1
Description: NF20142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20142_low_1
NF20142_low_1
[»] chr1 (22 HSPs)
chr1 (21-522)||(39395812-39396305)
chr1 (107-183)||(10324937-10325013)
chr1 (107-184)||(1514353-1514430)
chr1 (94-167)||(43018461-43018534)
chr1 (107-163)||(3515828-3515884)
chr1 (96-159)||(33693020-33693083)
chr1 (124-186)||(3416107-3416169)
chr1 (92-164)||(6574176-6574248)
chr1 (144-184)||(27500332-27500372)
chr1 (107-163)||(32370050-32370106)
chr1 (107-150)||(37522942-37522985)
chr1 (144-183)||(52263646-52263685)
chr1 (101-179)||(4554912-4554989)
chr1 (107-161)||(28083909-28083963)
chr1 (127-184)||(213535-213592)
chr1 (107-183)||(48549013-48549087)
chr1 (94-167)||(52013493-52013566)
chr1 (107-183)||(6041485-6041560)
chr1 (127-167)||(17284126-17284166)
chr1 (107-167)||(20026179-20026239)
chr1 (75-167)||(28287351-28287442)
chr1 (107-163)||(44801595-44801651)
[»] chr6 (11 HSPs)
chr6 (92-167)||(30926793-30926868)
chr6 (107-183)||(1485145-1485221)
chr6 (92-183)||(31305846-31305937)
chr6 (107-184)||(852542-852619)
chr6 (107-167)||(34898705-34898766)
chr6 (101-184)||(9505774-9505857)
chr6 (107-164)||(2234525-2234582)
chr6 (110-167)||(10874507-10874564)
chr6 (127-164)||(34027435-34027472)
chr6 (110-167)||(34063325-34063382)
chr6 (94-166)||(25388075-25388146)
[»] chr8 (11 HSPs)
chr8 (101-167)||(4336640-4336706)
chr8 (105-184)||(16972062-16972141)
chr8 (124-163)||(5893234-5893273)
chr8 (411-458)||(17899465-17899511)
chr8 (105-183)||(30098918-30098994)
chr8 (118-168)||(3206078-3206128)
chr8 (105-183)||(13384653-13384731)
chr8 (194-280)||(18355758-18355843)
chr8 (105-183)||(26100145-26100223)
chr8 (124-184)||(32736489-32736549)
chr8 (127-183)||(34478193-34478249)
[»] chr2 (11 HSPs)
chr2 (89-183)||(44439246-44439340)
chr2 (108-184)||(13912798-13912874)
chr2 (101-184)||(33961979-33962062)
chr2 (92-167)||(3476444-3476519)
chr2 (92-183)||(33502847-33502938)
chr2 (107-168)||(10618955-10619016)
chr2 (107-164)||(42982554-42982611)
chr2 (95-157)||(7630191-7630253)
chr2 (92-167)||(7629866-7629939)
chr2 (91-167)||(36374311-36374386)
chr2 (127-183)||(42741007-42741063)
[»] chr7 (6 HSPs)
chr7 (107-168)||(30182310-30182371)
chr7 (107-184)||(38123664-38123741)
chr7 (107-184)||(40561756-40561833)
chr7 (107-164)||(27571872-27571929)
chr7 (127-276)||(40491608-40491750)
chr7 (132-164)||(22310477-22310509)
[»] chr4 (13 HSPs)
chr4 (107-184)||(33843987-33844064)
chr4 (116-183)||(4243406-4243473)
chr4 (96-183)||(10185193-10185280)
chr4 (94-163)||(2206362-2206431)
chr4 (92-184)||(32818368-32818459)
chr4 (116-168)||(33843702-33843754)
chr4 (107-167)||(37439155-37439215)
chr4 (107-139)||(48045744-48045776)
chr4 (101-152)||(8330120-8330171)
chr4 (124-183)||(47596300-47596359)
chr4 (127-184)||(41751270-41751327)
chr4 (107-183)||(9064241-9064317)
chr4 (110-162)||(20712664-20712715)
[»] chr3 (17 HSPs)
chr3 (105-167)||(30301013-30301076)
chr3 (107-184)||(27266792-27266869)
chr3 (107-184)||(35264409-35264486)
chr3 (107-183)||(3776532-3776608)
chr3 (94-158)||(44489235-44489299)
chr3 (110-149)||(829906-829945)
chr3 (105-184)||(36302191-36302270)
chr3 (122-183)||(46853533-46853594)
chr3 (112-167)||(44958621-44958676)
chr3 (92-154)||(20484020-20484082)
chr3 (117-167)||(23187865-23187915)
chr3 (111-180)||(35058375-35058445)
chr3 (130-167)||(37703132-37703169)
chr3 (107-166)||(3845129-3845189)
chr3 (107-167)||(25359589-25359649)
chr3 (109-177)||(38332559-38332627)
chr3 (194-278)||(53567968-53568050)
[»] chr5 (12 HSPs)
chr5 (92-184)||(33608499-33608591)
chr5 (93-142)||(42724403-42724452)
chr5 (79-163)||(3043040-3043124)
chr5 (101-180)||(37877062-37877141)
chr5 (92-184)||(10898718-10898808)
chr5 (94-163)||(11132804-11132873)
chr5 (107-168)||(24306110-24306171)
chr5 (107-168)||(24367145-24367206)
chr5 (157-263)||(29922956-29923059)
chr5 (107-184)||(36639947-36640024)
chr5 (92-184)||(10859836-10859928)
chr5 (149-213)||(14299850-14299913)
[»] scaffold0283 (1 HSPs)
scaffold0283 (93-142)||(18377-18426)
[»] scaffold0361 (1 HSPs)
scaffold0361 (132-164)||(14132-14164)


Alignment Details
Target: chr1 (Bit Score: 423; Significance: 0; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 21 - 522
Target Start/End: Original strand, 39395812 - 39396305
Alignment:
Q  21 attcattcgtataatcatttatcttcttcatcaagttaacctgagattcaaaatgttggttgctttagagaagaattgaatctaatttgaagctagaaat 120  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  39395812 attcattcgtataatcatgtatcttcttcatcaagttaacctgagattcaaaatgttggttgctttagagaagaattgaatctaatttgaatctaaaaat 39395911  T
Q  121 tggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatggaatgaatatatccaaatataaattacttttgcctt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  39395912 tggagttttttattctagaattaatttttacactcaaatttattgttcgactcatttttacatggaatgaatatatccaaatataaattacttta-cctt 39396010  T
Q  221 caactcccttgtaatcatatatcaattttagataatcaattcacttgaaatcaatttttaccactaacacacactaagtttgatgaaatcatggtggatt 320  Q
    |||||||||| || |      |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39396011 caactcccttatattt-----tca--tttagataatcaattcactcgaaatcaatttttaccactaacacacactaagtttgatgaaatcatggtggatt 39396103  T
Q  321 ctgggattcttttgaagctcgaagtgtaatttttgctaaatttgcggcgacacattgcactaagtttgacgaaatcaatgtggtaattgagattttgttg 420  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39396104 ctgggattcttttgaagctcgaagtgtaatttttgctaaatttgcggcgacacattgcactaagtttgacgaaatcaatgtggtaattgagattttgttg 39396203  T
Q  421 aagtttcaaagtgcagttttttgctaaaatcacggtggcacaacttaaatattccaaacacacaactccaatgtttggtattcctttctcacgtccctat 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39396204 aagtttcaaagtgcagttttttgctaaaatcacggtggcacaacttaaatattccaaacacactactccaatgtttggtattcctttctcacgtccctat 39396303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 10325013 - 10324937
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    |||||| ||||||||| || |||| |||||| |||| ||||||||||||||||||||||||  ||||| ||||||||    
T  10325013 ttgaagatagaaattgtagcttttgattctataattgatttttacactcaaatttattgttatactcacttttacat 10324937  T

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Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 1514353 - 1514430
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    |||||||||| | ||| || |||||||| || |||| |||||||||| |||||||||||||  |||||||||||||||    
T  1514353 ttgaagctaggatttgtagctttttattatataattgatttttacacacaaatttattgttcaactcatttttacatg 1514430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 43018461 - 43018534
Alignment:
Q  94 aattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtt 167  Q
    |||||| |||||  ||||||||||| ||||| ||||| ||||||||||| || |||| ||||||||||||||||    
T  43018461 aattgattctaacatgaagctagaatttggaatttttaattctagaattgatgtttagactcaaatttattgtt 43018534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 3515828 - 3515884
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttat 163  Q
    |||||||||||||||| || |||| ||||||||||| ||||||||||||||| ||||    
T  3515828 ttgaagctagaaattgtagcttttcattctagaattgatttttacactcaaaattat 3515884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 159
Target Start/End: Original strand, 33693020 - 33693083
Alignment:
Q  96 ttgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaat 159  Q
    |||| ||||| |||||||||||||||| || |||| |||||| |||| ||||||||||||||||    
T  33693020 ttgattctaacttgaagctagaaattgtagcttttgattctataattgatttttacactcaaat 33693083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 3416107 - 3416169
Alignment:
Q  124 agttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatgga 186  Q
    ||||||||||| ||||||| |||||||||| ||||||||| |||| ||||| ||||| |||||    
T  3416107 agttttttattttagaattgatttttacacacaaatttatagtttaactcaattttatatgga 3416169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 6574176 - 6574248
Alignment:
Q  92 agaattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttatt 164  Q
    |||||||| ||||| || |||||| ||||| ||| |||| ||| ||||||||||||| | |||||||||||||    
T  6574176 agaattgattctaactttaagctaaaaattagagcttttgattgtagaattaattttcagactcaaatttatt 6574248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 27500332 - 27500372
Alignment:
Q  144 atttttacactcaaatttattgtttgactcatttttacatg 184  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  27500332 atttttacactcaaatttattgttcaactcatttttacatg 27500372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 32370106 - 32370050
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttat 163  Q
    |||||| ||||| ||| | |||||||||||||||||| ||||||||| |||||||||    
T  32370106 ttgaagttagaatttgtaattttttattctagaattattttttacacacaaatttat 32370050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 37522985 - 37522942
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaattttta 150  Q
    |||||||||||| |||||||||||||| |||||||| |||||||    
T  37522985 ttgaagctagaagttggagttttttatcctagaattgattttta 37522942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 52263685 - 52263646
Alignment:
Q  144 atttttacactcaaatttattgtttgactcatttttacat 183  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  52263685 atttttacactcaaatttattgtttaactcagttttacat 52263646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 4554912 - 4554989
Alignment:
Q  101 tctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcattttt 179  Q
    |||||||||||| ||||  |||||||||||| || || | || |||||||  |||||||||||||||||| ||||||||    
T  4554912 tctaatttgaagttagactttggagttttttctt-taaatttgatttttagtctcaaatttattgtttgattcattttt 4554989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 28083963 - 28083909
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaattt 161  Q
    |||||||||||| ||| || |||| |||||| ||||||||||||||| |||||||    
T  28083963 ttgaagctagaatttgtagcttttgattctataattaatttttacacacaaattt 28083909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 213592 - 213535
Alignment:
Q  127 tttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    |||| ||||||||||| ||||||| |||||||||| |||||  ||||| |||||||||    
T  213592 ttttgattctagaattgatttttaaactcaaatttgttgttcaactcacttttacatg 213535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 48549087 - 48549013
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    |||||||||||||||| || || | ||||||||||| ||||||| ||||  ||||||||||  ||||| ||||||||    
T  48549087 ttgaagctagaaattgtagcttctgattctagaattgatttttaaactc--atttattgttcaactcacttttacat 48549013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 52013566 - 52013493
Alignment:
Q  94 aattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtt 167  Q
    |||||| ||||| ||||||||| ||| ||  || | | ||||||||||| ||||||||||||||||||| ||||    
T  52013566 aattgattctaacttgaagctaaaaactgtggtctctgattctagaattgatttttacactcaaatttactgtt 52013493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 6041485 - 6041560
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    |||||||||||| ||| ||  ||| |||||||||||  |||||| |||| |||||||||||| ||||| ||||||||    
T  6041485 ttgaagctagaatttgaagcctttgattctagaattgttttttagactc-aatttattgtttaactcacttttacat 6041560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 17284126 - 17284166
Alignment:
Q  127 tttttattctagaattaatttttacactcaaatttattgtt 167  Q
    |||| |||||| |||| ||||||||||||||||||||||||    
T  17284126 ttttgattctaaaattgatttttacactcaaatttattgtt 17284166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 20026239 - 20026179
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtt 167  Q
    |||||||||||||||  || |||| | ||||||||| ||||  ||||||||||||||||||    
T  20026239 ttgaagctagaaattcaagcttttaactctagaattgatttgaacactcaaatttattgtt 20026179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 28287442 - 28287351
Alignment:
Q  75 gttggttgctttagagaagaattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtt 167  Q
    |||||||||||| ||| |||||||  |||| || ||||| || | ||| || |||| ||| ||||||| ||||| ||||||||||||||||||    
T  28287442 gttggttgcttttgagtagaattggttctactt-gaagcaaggatttgtagcttttgattttagaattgattttaacactcaaatttattgtt 28287351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 44801595 - 44801651
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttat 163  Q
    |||||| ||| | ||| |||||||||||||| ||||||||||||| | |||||||||    
T  44801595 ttgaagttaggatttgtagttttttattctaaaattaatttttacgcgcaaatttat 44801651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 30926868 - 30926793
Alignment:
Q  92 agaattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtt 167  Q
    ||||| || ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30926868 agaatggattctaacttgaagctagaaattggagttttttattctagaattgatttttacactcaaatttattgtt 30926793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 1485221 - 1485145
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||  ||||| ||||||||    
T  1485221 ttgaatctagaaattggagcttttgattctagaattgattttaacactcaaatttattgttcaactcacttttacat 1485145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 31305937 - 31305846
Alignment:
Q  92 agaattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    |||| ||| ||||| ||||||||| ||||||||| |||| ||||||||||| |||| ||||||||||||||||| |  ||||| ||||||||    
T  31305937 agaactgattctaacttgaagctaaaaattggagcttttgattctagaattgatttatacactcaaatttattgatcaactcacttttacat 31305846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 852542 - 852619
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    |||||||||||||||| || || | ||||||||||| |||||||||| ||||| |||||||| ||||| |||||||||    
T  852542 ttgaagctagaaattgtaggttctgattctagaattgatttttacacccaaatgtattgtttaactcacttttacatg 852619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 34898705 - 34898766
Alignment:
Q  107 ttgaagctagaaattggagtttt-ttattctagaattaatttttacactcaaatttattgtt 167  Q
    ||||||||||||||| ||||||| ||||||||||||| ||||| |||||| |||||||||||    
T  34898705 ttgaagctagaaattagagtttttttattctagaattgattttaacactcgaatttattgtt 34898766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 9505774 - 9505857
Alignment:
Q  101 tctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    ||||| |||||| |||||||||||| |||| ||||||  ||| ||||||| ||||||||||||||||  || || |||||||||    
T  9505774 tctaacttgaagatagaaattggagcttttgattctatgattgatttttaaactcaaatttattgttcaacacacttttacatg 9505857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 2234525 - 2234582
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttatt 164  Q
    ||||||||| ||| || || |||| ||||||||||| ||||| |||||||||||||||    
T  2234525 ttgaagctaaaaactgaagcttttgattctagaattgattttaacactcaaatttatt 2234582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 10874507 - 10874564
Alignment:
Q  110 aagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtt 167  Q
    |||||||||||| ||| |||| ||||||||||| ||||||||| ||||| ||| ||||    
T  10874507 aagctagaaattagagcttttgattctagaattgatttttacattcaaacttagtgtt 10874564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 34027472 - 34027435
Alignment:
Q  127 tttttattctagaattaatttttacactcaaatttatt 164  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  34027472 ttttgattctagaattgatttttacactcaaatttatt 34027435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 34063325 - 34063382
Alignment:
Q  110 aagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtt 167  Q
    ||||||||||||| || || | ||||||||||||| ||||||| ||||| ||||||||    
T  34063325 aagctagaaattgtaggttctcattctagaattaacttttacaatcaaacttattgtt 34063382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 25388075 - 25388146
Alignment:
Q  94 aattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgt 166  Q
    |||||| ||||||| ||| | |||||||| ||| ||| ||| ||||||| ||||| |||||||||||||||||    
T  25388075 aattgattctaatt-gaaacaagaaattgaagtctttgattttagaattgattttgacactcaaatttattgt 25388146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 4336706 - 4336640
Alignment:
Q  101 tctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtt 167  Q
    ||||| ||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||||||    
T  4336706 tctaacttgaagctagaaaattgagctttttattttagaattaatttttacactcaaatttattgtt 4336640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 16972141 - 16972062
Alignment:
Q  105 atttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    |||||||||||||| ||| ||||||| ||| ||||||| ||||||| || |||||||||||||  | ||| |||||||||    
T  16972141 atttgaagctagaatttgtagtttttaattttagaattgatttttaaacacaaatttattgttcaaatcacttttacatg 16972062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 5893234 - 5893273
Alignment:
Q  124 agttttttattctagaattaatttttacactcaaatttat 163  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  5893234 agttttttattctagaattaattattacacacaaatttat 5893273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 458
Target Start/End: Complemental strand, 17899511 - 17899465
Alignment:
Q  411 gattttgttgaagtttcaaagtgcagttttttgctaaaatcacggtgg 458  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||    
T  17899511 gattttgttgaagtttcaaagtatag-tttttgctaaaatcacggtgg 17899465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 30098918 - 30098994
Alignment:
Q  105 atttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    |||||||||||||| ||| || |||  |||||||||||||||||||||   |||||||| |||| ||||| ||||||||    
T  30098918 atttgaagctagaatttgtagctttcgattctagaattaatttttaca--aaaatttatagtttaactcacttttacat 30098994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 3206078 - 3206128
Alignment:
Q  118 aattggagttttttattctagaattaatttttacactcaaatttattgttt 168  Q
    ||||||||||||||||| || |||| || |||||||| |||||||||||||    
T  3206078 aattggagttttttattataaaattgatctttacacttaaatttattgttt 3206128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 13384731 - 13384653
Alignment:
Q  105 atttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    ||||||||||| || ||| || |||| ||||||||||| ||||| |||| ||||||||| |||  ||||| ||||||||    
T  13384731 atttgaagctaaaatttgtagcttttgattctagaattgattttcacacacaaatttatagttcaactcacttttacat 13384653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 18355843 - 18355758
Alignment:
Q  194 tatccaaatataaattacttttgccttcaactcccttgtaatcatatatcaattttagataatcaattcacttgaaatcaattttta 280  Q
    ||||||||||||||| ||||||  || |||  | ||| |||||||| |||||||||| | ||||||||||||  |||||||||||||    
T  18355843 tatccaaatataaatcacttttatctccaagccacttttaatcata-atcaattttacaaaatcaattcactcaaaatcaattttta 18355758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 26100223 - 26100145
Alignment:
Q  105 atttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    |||||||||||| | ||| || |||| |||||| |||| |||||||||| ||||||||| |||  ||||| ||||||||    
T  26100223 atttgaagctaggatttgtagcttttgattctataattgatttttacacacaaatttatggttcaactcacttttacat 26100145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 32736489 - 32736549
Alignment:
Q  124 agttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    ||||||||||| || ||||||||||||||| ||||||||| |||  | ||| |||||||||    
T  32736489 agttttttattttaaaattaatttttacacacaaatttatagttcaattcacttttacatg 32736549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 34478249 - 34478193
Alignment:
Q  127 tttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    |||| ||| ||||||| ||||||| ||||||||||||||||  ||| ||||||||||    
T  34478249 ttttgattttagaattcatttttatactcaaatttattgttcaacttatttttacat 34478193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 89 - 183
Target Start/End: Original strand, 44439246 - 44439340
Alignment:
Q  89 agaagaattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    ||||||||||| ||||| ||||||||| || |||||| |||| |||||| |||| ||||| ||||||||||||||||||  ||||| ||||||||    
T  44439246 agaagaattgattctaacttgaagctaaaatttggagcttttgattctaaaattgattttaacactcaaatttattgttcaactcacttttacat 44439340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 13912798 - 13912874
Alignment:
Q  108 tgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    ||||||||||| ||| | |||||||||||||||||||||||||||| ||||||||  |||  |||||||||||||||    
T  13912798 tgaagctagaatttgtaattttttattctagaattaatttttacacacaaatttaccgttcaactcatttttacatg 13912874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 33962062 - 33961979
Alignment:
Q  101 tctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    ||||| || ||||| ||||||||||||||| |||||| |||| ||||||| ||||||||||||||||  | |||||||||||||    
T  33962062 tctaactttaagcttgaaattggagtttttgattctataattgatttttagactcaaatttattgttcaagtcatttttacatg 33961979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 3476519 - 3476444
Alignment:
Q  92 agaattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtt 167  Q
    |||||||| ||||| || |||||| ||||| ||| |||| ||||||||||| ||||||||| |||||| |||||||    
T  3476519 agaattgattctaacttaaagctaaaaattagagcttttgattctagaatttatttttacattcaaatgtattgtt 3476444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 33502938 - 33502847
Alignment:
Q  92 agaattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    |||||||| ||||| |||||||||||| ||  ||||||| | ||||||  | ||| ||||||| ||||||||||||  ||||||||||||||    
T  33502938 agaattgattctaacttgaagctagaatttcaagtttttgagtctagatgtgattattacactaaaatttattgttcaactcatttttacat 33502847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 10619016 - 10618955
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgttt 168  Q
    ||||||||||||||| ||| |||| |||||| |||| ||||| |||||||||||| ||||||    
T  10619016 ttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgttt 10618955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 42982554 - 42982611
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttatt 164  Q
    |||||||||||||||| || |||| |||| |||||| |||||||||| ||||||||||    
T  42982554 ttgaagctagaaattgtagcttttgattccagaattgatttttacacacaaatttatt 42982611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 7630191 - 7630253
Alignment:
Q  95 attgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaa 157  Q
    ||||| |||||| |||||||||| |||| || |||| ||||||||||| |||||| |||||||    
T  7630191 attgattctaatgtgaagctagacattgtagcttttgattctagaattgatttttccactcaa 7630253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 7629866 - 7629939
Alignment:
Q  92 agaattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtt 167  Q
    |||||||| ||||| ||||||||||| |||  || || ||| ||||||||| || |||||||||||||| ||||||    
T  7629866 agaattgattctaacttgaagctagagatt--agcttcttactctagaattgatatttacactcaaattcattgtt 7629939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 36374311 - 36374386
Alignment:
Q  91 aagaattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtt 167  Q
    ||||||| | ||||||| ||||||| || |||||||||||| || || |||||||| | | ||||||||||||||||    
T  36374311 aagaatttattctaattagaagctaaaatttggagtttttt-ttttataattaattctcaaactcaaatttattgtt 36374386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 42741007 - 42741063
Alignment:
Q  127 tttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    |||| ||||||||||| ||||||||||||||||||| |||   ||||| ||||||||    
T  42741007 ttttgattctagaattgatttttacactcaaatttactgtccaactcacttttacat 42741063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 30182371 - 30182310
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgttt 168  Q
    ||||||||| |||||| || |||| |||||||||||||||||||||||||||||||||||||    
T  30182371 ttgaagctaaaaattgtagcttttgattctagaattaatttttacactcaaatttattgttt 30182310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 38123741 - 38123664
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    |||||||||||||||| || || | ||||||||||| |||||||||||||||||||||| |  ||||| |||||||||    
T  38123741 ttgaagctagaaattgtagcttctaattctagaattgatttttacactcaaatttattggtcaactcacttttacatg 38123664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 40561833 - 40561756
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    |||||| ||||||||| ||||| | | |||||||||||||| ||||||||||| |||||||  ||||| |||||||||    
T  40561833 ttgaagttagaaattgtagtttgtaagtctagaattaatttatacactcaaatatattgttcaactcacttttacatg 40561756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 27571872 - 27571929
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttatt 164  Q
    |||||| |||||||||||| |||| ||||||||||| ||||| |||||||| ||||||    
T  27571872 ttgaagttagaaattggagcttttgattctagaattgattttaacactcaagtttatt 27571929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 276
Target Start/End: Original strand, 40491608 - 40491750
Alignment:
Q  127 tttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatggaatgaatatatccaaatataaattacttttgccttcaactc 226  Q
    |||| ||||||||||| | |||||||| ||||||||  |||| ||||| ||||||     |||||| |||||||| |||||| || ||| ||||||||||    
T  40491608 ttttgattctagaattgacttttacacacaaatttaaagtttaactcacttttac-----atgaatgtatccaaaaataaatcac-tttaccttcaactc 40491701  T
Q  227 ccttgtaatcatatatcaattttagataatcaattcacttgaaatcaatt 276  Q
     ||| || ||| | |||||||||| | ||||||||||||  |||||||||    
T  40491702 acttttagtca-aaatcaattttacagaatcaattcactcaaaatcaatt 40491750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 22310509 - 22310477
Alignment:
Q  132 attctagaattaatttttacactcaaatttatt 164  Q
    ||||||||||||||||||||||| |||||||||    
T  22310509 attctagaattaatttttacacttaaatttatt 22310477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 5e-17; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 33843987 - 33844064
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    ||||||||||||||||||| |||| |||||| |||| ||||| ||||||||||||||||||  ||| |||||||||||    
T  33843987 ttgaagctagaaattggagcttttgattctaaaattgattttaacactcaaatttattgttcaacttatttttacatg 33844064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 4243406 - 4243473
Alignment:
Q  116 gaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||||||  ||||| ||||||||    
T  4243406 gaaattggagcttttgattctagaattgatttttacactcaaatttattgttctactcacttttacat 4243473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 10185193 - 10185280
Alignment:
Q  96 ttgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    |||| ||||| |||||| ||||||||| || |||| |||||| |||| || |||||||||||||||||||||| ||||| ||||||||    
T  10185193 ttgattctaacttgaaggtagaaattgaagcttttgattctaaaattgatctttacactcaaatttattgtttaactcacttttacat 10185280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 2206431 - 2206362
Alignment:
Q  94 aattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttat 163  Q
    |||||| ||||  ||||||||| ||||||||| |||| ||||||| ||| |||||| |||||||||||||    
T  2206431 aattgattctagcttgaagctaaaaattggagcttttgattctaggattgatttttgcactcaaatttat 2206362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 32818459 - 32818368
Alignment:
Q  92 agaattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    |||||||| |||| ||||||||||||| ||| || |||| ||||||||||| |||||| ||| ||||||||| |||  ||| | |||||||||    
T  32818459 agaattgattcta-tttgaagctagaatttgtagcttttgattctagaattgatttttgcacacaaatttatagttcaactaacttttacatg 32818368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 33843702 - 33843754
Alignment:
Q  116 gaaattggagttttttattctagaattaatttttacactcaaatttattgttt 168  Q
    |||||||||| ||||||| ||| |||| ||||| |||||||||||||||||||    
T  33843702 gaaattggagctttttatcctaaaattgattttaacactcaaatttattgttt 33843754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 37439155 - 37439215
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtt 167  Q
    |||||||||||||||  || |||| |||||| |||| |||||||||||||| |||||||||    
T  37439155 ttgaagctagaaattatagcttttaattctataattgatttttacactcaattttattgtt 37439215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 139
Target Start/End: Complemental strand, 48045776 - 48045744
Alignment:
Q  107 ttgaagctagaaattggagttttttattctaga 139  Q
    |||||||||||||||||||||||||||||||||    
T  48045776 ttgaagctagaaattggagttttttattctaga 48045744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 152
Target Start/End: Original strand, 8330120 - 8330171
Alignment:
Q  101 tctaatttgaagctagaaattggagttttttattctagaattaatttttaca 152  Q
    ||||| ||||||||||||||||||| |||| |||||| |||| |||||||||    
T  8330120 tctaacttgaagctagaaattggagcttttgattctataattgatttttaca 8330171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 47596359 - 47596300
Alignment:
Q  124 agttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    ||||||| ||| || |||| |||||||||||||||||||||||||  | |||||||||||    
T  47596359 agtttttgattataaaattgatttttacactcaaatttattgtttagcccatttttacat 47596300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 41751327 - 41751270
Alignment:
Q  127 tttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    |||| ||||||||||| ||||||| ||| ||||||||||||| | ||| |||||||||    
T  41751327 ttttgattctagaattgatttttaaacttaaatttattgtttaattcagttttacatg 41751270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 9064241 - 9064317
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    ||||| |||||| ||| ||||||| ||||||||||| ||||| |||||||| ||||  |||  ||||| ||||||||    
T  9064241 ttgaaactagaatttgtagtttttgattctagaattgattttcacactcaagtttacggttcaactcacttttacat 9064317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 20712664 - 20712715
Alignment:
Q  110 aagctagaaattggagttttttattctagaattaatttttacactcaaattta 162  Q
    |||||||||||||||| |||| |||||| |||| |||||||||||||| ||||    
T  20712664 aagctagaaattggagctttt-attctataattgatttttacactcaatttta 20712715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 8e-16; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 30301076 - 30301013
Alignment:
Q  105 atttgaagctagaaattggagtttttt-attctagaattaatttttacactcaaatttattgtt 167  Q
    ||||||||||||||||||||||||||| |||||||||||  |||| ||||||||||||||||||    
T  30301076 atttgaagctagaaattggagttttttaattctagaattggttttaacactcaaatttattgtt 30301013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 27266869 - 27266792
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    |||||||||||||||| || |  | |||| |||||||||||||||||||||||||||||||  ||| | |||||||||    
T  27266869 ttgaagctagaaattgtagctaatgattcaagaattaatttttacactcaaatttattgttcaactaacttttacatg 27266792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 35264486 - 35264409
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    ||||| ||||||||| ||| |||| ||||||||||| ||||| ||||| ||||||||||||  | |||||||||||||    
T  35264486 ttgaaactagaaattagagcttttgattctagaattgattttaacacttaaatttattgttcaagtcatttttacatg 35264409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 3776532 - 3776608
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    ||||| |||||||||| || || | |||||||||||||||||||||||||||||| ||| |  ||||| ||||||||    
T  3776532 ttgaatctagaaattgtagcttctgattctagaattaatttttacactcaaatttgttgctgaactcacttttacat 3776608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 44489235 - 44489299
Alignment:
Q  94 aattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaa 158  Q
    |||||| ||||| ||||  |||||| |||||||||||||||||| |||| |||||||||||||||    
T  44489235 aattgattctaacttgatactagaagttggagttttttattctacaattgatttttacactcaaa 44489299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 829906 - 829945
Alignment:
Q  110 aagctagaaattggagttttttattctagaattaattttt 149  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  829906 aagctagaaattggagttttttattctagaattgattttt 829945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 36302191 - 36302270
Alignment:
Q  105 atttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    ||||||||||||| ||||||| |||| ||| ||||||| |||||  |||| ||||||||||||  ||||| |||||||||    
T  36302191 atttgaagctagagattggagattttgattttagaattgattttagcacttaaatttattgttcaactcacttttacatg 36302270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 46853594 - 46853533
Alignment:
Q  122 ggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacat 183  Q
    |||| |||| ||||||||||| ||||| ||||||||||||||||||  ||||| ||||||||    
T  46853594 ggagcttttgattctagaattgattttaacactcaaatttattgttcaactcacttttacat 46853533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 44958676 - 44958621
Alignment:
Q  112 gctagaaattggagttttttattctagaattaatttttacactcaaatttattgtt 167  Q
    |||||||||||||| |||| ||||||||| | ||||| |||||||| |||||||||    
T  44958676 gctagaaattggagcttttgattctagaaatgattttaacactcaactttattgtt 44958621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 20484082 - 20484020
Alignment:
Q  92 agaattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacact 154  Q
    |||||||| |||||||||||||||||| || || ||||| ||||| ||||| ||| |||||||    
T  20484082 agaattgattctaatttgaagctagaatttagaatttttcattcttgaattgattgttacact 20484020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 23187865 - 23187915
Alignment:
Q  117 aaattggagttttttattctagaattaatttttacactcaaatttattgtt 167  Q
    ||||||||| |||| ||||||||||| | |||||||||||||||| |||||    
T  23187865 aaattggagcttttaattctagaattgaattttacactcaaatttgttgtt 23187915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 35058375 - 35058445
Alignment:
Q  111 agctagaaattggagttttttattctagaattaatttttacactcaaat-ttattgtttgactcattttta 180  Q
    ||||||||||| ||| |||| ||||||||||| ||||| |||||||||| ||||||||  ||||| |||||    
T  35058375 agctagaaattcgagcttttgattctagaattgattttaacactcaaatattattgttcaactcactttta 35058445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 37703132 - 37703169
Alignment:
Q  130 ttattctagaattaatttttacactcaaatttattgtt 167  Q
    ||||| || |||||||||||||||||||||||||||||    
T  37703132 ttattttaaaattaatttttacactcaaatttattgtt 37703169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 3845189 - 3845129
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaatt-aatttttacactcaaatttattgt 166  Q
    ||||| ||||||| ||||| |||| ||||||||||| | |||||||||| |||||||||||    
T  3845189 ttgaaactagaaactggagcttttgattctagaattgattttttacactaaaatttattgt 3845129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 25359649 - 25359589
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtt 167  Q
    |||||| ||||| ||| |||||||||||||| |||| ||||| |||| || ||||||||||    
T  25359649 ttgaagttagaatttgtagttttttattctataattgattttcacacacatatttattgtt 25359589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 38332627 - 38332559
Alignment:
Q  109 gaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcattt 177  Q
    ||||||| ||||||||| || | |||||| ||||  | |||||||||||||||||||||  ||||||||    
T  38332627 gaagctacaaattggagcttctgattctaaaattggtatttacactcaaatttattgttcaactcattt 38332559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 53567968 - 53568050
Alignment:
Q  194 tatccaaatataaattacttttgccttcaactcccttgtaatcatatatcaattttagataatcaattcacttgaaatcaatttt 278  Q
    |||||||| ||||||||||||| | |||||||| ||| |||||| | |||||||||  | ||||||||||||  |||||||||||    
T  53567968 tatccaaacataaattactttt-cattcaactcacttttaatca-aaatcaattttgtaaaatcaattcactcaaaatcaatttt 53568050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 33608499 - 33608591
Alignment:
Q  92 agaattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    |||||||| ||||| |||||||||||| ||||||||||| ||||||||||  ||||||||| | ||||| || |||  ||||| |||||||||    
T  33608499 agaattgattctaacttgaagctagaagttggagtttttcattctagaatggatttttacagttaaattcatagttcaactcacttttacatg 33608591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 42724403 - 42724452
Alignment:
Q  93 gaattgaatctaatttgaagctagaaattggagttttttattctagaatt 142  Q
    ||||||| ||||| |||||||||||||||| |||||||||||||||||||    
T  42724403 gaattgattctaacttgaagctagaaattgaagttttttattctagaatt 42724452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 3043124 - 3043040
Alignment:
Q  79 gttgctttagagaagaattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttat 163  Q
    ||||||| |||  |||||||| |||||  ||||||||||||||||||||||  ||||||||||| ||||||| | ||||| ||||    
T  3043124 gttgcttaagaatagaattgattctaacatgaagctagaaattggagttttcaattctagaattgatttttatattcaaagttat 3043040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 37877062 - 37877141
Alignment:
Q  101 tctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcattttta 180  Q
    ||||| |||||||||||| || ||||||||  | ||||||| ||||||||  |||||||||||||||| ||||| |||||    
T  37877062 tctaacttgaagctagaatttagagtttttgctcctagaatgaatttttagcctcaaatttattgtttaactcactttta 37877141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 10898718 - 10898808
Alignment:
Q  92 agaattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    |||||||| ||||| ||||||  ||||||||||||| || | ||||  ||| |||||||||| |||||||||||||  ||||| |||||||||    
T  10898718 agaattgattctaacttgaagtaagaaattggagttattgaatcta--attgatttttacacacaaatttattgttcaactcacttttacatg 10898808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 11132873 - 11132804
Alignment:
Q  94 aattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttat 163  Q
    |||||| ||||| ||||||||| |||||| || |||||||| ||||||| || |||||||||||| ||||    
T  11132873 aattgattctaacttgaagctacaaattgtagctttttattgtagaattgatatttacactcaaaattat 11132804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 24306171 - 24306110
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgttt 168  Q
    |||||| ||||||||| |  |||| |||||| |||| |||||||||||||||||||||||||    
T  24306171 ttgaagttagaaattgtaacttttgattctataattgatttttacactcaaatttattgttt 24306110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 24367145 - 24367206
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgttt 168  Q
    |||||| ||||||||| |  |||| |||||| |||| |||||||||||||||||||||||||    
T  24367145 ttgaagttagaaattgtaacttttgattctataattgatttttacactcaaatttattgttt 24367206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 263
Target Start/End: Original strand, 29922956 - 29923059
Alignment:
Q  157 aatttattgtttgactcatttttacatggaatgaatatatccaaatataaattacttttgccttcaactcccttgtaatcatatatcaattttagataat 256  Q
    |||||||| ||| |||||||||| |||| ||||||| |||||||| |||||||||||   | |||||||| ||| || ||| | |||||||||| |||||    
T  29922956 aatttattttttaactcatttttgcatg-aatgaatgtatccaaacataaattacttca-cattcaactcacttatagtcaaa-atcaattttacataat 29923052  T
Q  257 caattca 263  Q
    |||||||    
T  29923053 caattca 29923059  T

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Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 36639947 - 36640024
Alignment:
Q  107 ttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    |||||||| ||||||| || || | |||||||||||  |||||||||||||||||| ||||   |||| |||||||||    
T  36639947 ttgaagctggaaattgtagcttctaattctagaattgttttttacactcaaatttaatgttcacctcacttttacatg 36640024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 10859928 - 10859836
Alignment:
Q  92 agaattgaatctaatttgaagctagaaattggagttttttattctagaattaatttttacactcaaatttattgtttgactcatttttacatg 184  Q
    |||||||| ||||| |||||||||||| |||||| ||||   || | | || |||||||  ||||||||||||||||||| | || |||||||    
T  10859928 agaattgattctaacttgaagctagaatttggagcttttgcctcaacatttgatttttaacctcaaatttattgtttgaccctttcttacatg 10859836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 14299850 - 14299913
Alignment:
Q  149 tacactcaaatttattgtttgactcatttttacatggaatgaatatatccaaatataaattactt 213  Q
    |||||||||| ||| ||||  |||||||||||||| |||||||| |||||||  |||||||||||    
T  14299850 tacactcaaacttactgttcaactcatttttacat-gaatgaatgtatccaataataaattactt 14299913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 18377 - 18426
Alignment:
Q  93 gaattgaatctaatttgaagctagaaattggagttttttattctagaatt 142  Q
    ||||||| ||||| |||||||||||||||| |||||||||||||||||||    
T  18377 gaattgattctaacttgaagctagaaattgaagttttttattctagaatt 18426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 14164 - 14132
Alignment:
Q  132 attctagaattaatttttacactcaaatttatt 164  Q
    ||||||||||| |||||||||||||||||||||    
T  14164 attctagaattgatttttacactcaaatttatt 14132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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